NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15230425|ref|NP_190689|]
View 

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

Protein Classification

sulfotransferase family protein( domain architecture ID 229543)

sulfotransferase family protein may utilize 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the transfer of sulfate to its substrate(s)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Sulfotransfer_1 super family cl21551
Sulfotransferase domain;
8-64 4.58e-07

Sulfotransferase domain;


The actual alignment was detected with superfamily member pfam00685:

Pssm-ID: 473908 [Multi-domain]  Cd Length: 253  Bit Score: 44.64  E-value: 4.58e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 15230425     8 ALSGREVNKTRRTVNGVDHkdFFRDGKVGDWKNHLsvTLETENKIDMTIKEKFQGSG 64
Cdd:pfam00685 201 NMKGNPCLNYSKLPKEVSP--FFRKGLVGDWKNYF--TPEQAEKFDEIYQEKMKGTG 253
 
Name Accession Description Interval E-value
Sulfotransfer_1 pfam00685
Sulfotransferase domain;
8-64 4.58e-07

Sulfotransferase domain;


Pssm-ID: 425820 [Multi-domain]  Cd Length: 253  Bit Score: 44.64  E-value: 4.58e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 15230425     8 ALSGREVNKTRRTVNGVDHkdFFRDGKVGDWKNHLsvTLETENKIDMTIKEKFQGSG 64
Cdd:pfam00685 201 NMKGNPCLNYSKLPKEVSP--FFRKGLVGDWKNYF--TPEQAEKFDEIYQEKMKGTG 253
PLN02164 PLN02164
sulfotransferase
 29-64 5.03e-07

sulfotransferase


Pssm-ID: 177822  Cd Length: 346  Bit Score: 44.53  E-value: 5.03e-07
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 15230425   29 FFRDGKVGDWKNHLsvTLETENKIDMTIKEKFQGSG 64
Cdd:PLN02164 307 YFRKGKVGDWQNYL--TPEMAARIDGLMEEKFKGTG 340
 
Name Accession Description Interval E-value
Sulfotransfer_1 pfam00685
Sulfotransferase domain;
8-64 4.58e-07

Sulfotransferase domain;


Pssm-ID: 425820 [Multi-domain]  Cd Length: 253  Bit Score: 44.64  E-value: 4.58e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 15230425     8 ALSGREVNKTRRTVNGVDHkdFFRDGKVGDWKNHLsvTLETENKIDMTIKEKFQGSG 64
Cdd:pfam00685 201 NMKGNPCLNYSKLPKEVSP--FFRKGLVGDWKNYF--TPEQAEKFDEIYQEKMKGTG 253
PLN02164 PLN02164
sulfotransferase
 29-64 5.03e-07

sulfotransferase


Pssm-ID: 177822  Cd Length: 346  Bit Score: 44.53  E-value: 5.03e-07
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 15230425   29 FFRDGKVGDWKNHLsvTLETENKIDMTIKEKFQGSG 64
Cdd:PLN02164 307 YFRKGKVGDWQNYL--TPEMAARIDGLMEEKFKGTG 340
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH