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Conserved domains on  [gi|15229661|ref|NP_190572|]
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ARM-repeat/Tetratricopeptide repeat (TPR)-like protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
3a0801s09 super family cl36792
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
 378-458 3.91e-05

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00990:

Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 46.13  E-value: 3.91e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15229661   378 EAMEIYTVGIDLCPldmlrdRVVLFSNRAQCYLLLKKVESAISDATRALCLsgvNNPHGKSLWRRSQAFDLKGSTRESLM 457
Cdd:TIGR00990 145 KAIKLYSKAIECKP------DPVYYSNRAACHNALGDWEKVVEDTTAALEL---DPDYSKALNRRANAYDGLGKYADALL 215


                  .
gi 15229661   458 D 458
Cdd:TIGR00990 216 D 216
 
Name Accession Description Interval E-value
3a0801s09 TIGR00990
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
 378-458 3.91e-05

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 46.13  E-value: 3.91e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15229661   378 EAMEIYTVGIDLCPldmlrdRVVLFSNRAQCYLLLKKVESAISDATRALCLsgvNNPHGKSLWRRSQAFDLKGSTRESLM 457
Cdd:TIGR00990 145 KAIKLYSKAIECKP------DPVYYSNRAACHNALGDWEKVVEDTTAALEL---DPDYSKALNRRANAYDGLGKYADALL 215


                  .
gi 15229661   458 D 458
Cdd:TIGR00990 216 D 216
 
Name Accession Description Interval E-value
3a0801s09 TIGR00990
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ...
 378-458 3.91e-05

mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273380 [Multi-domain]  Cd Length: 615  Bit Score: 46.13  E-value: 3.91e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15229661   378 EAMEIYTVGIDLCPldmlrdRVVLFSNRAQCYLLLKKVESAISDATRALCLsgvNNPHGKSLWRRSQAFDLKGSTRESLM 457
Cdd:TIGR00990 145 KAIKLYSKAIECKP------DPVYYSNRAACHNALGDWEKVVEDTTAALEL---DPDYSKALNRRANAYDGLGKYADALL 215


                  .
gi 15229661   458 D 458
Cdd:TIGR00990 216 D 216
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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