NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15232713|ref|NP_190289|]
View 

Glycosyl hydrolase family protein [Arabidopsis thaliana]

Protein Classification

glycoside hydrolase family 3 protein( domain architecture ID 11444863)

glycoside hydrolase family 3 (GH3) protein catalyzes the hydrolytic removal of nonreducing glycosyl end residues from a broad range of beta-D-glycans and beta-D-glycosides; similar to Wickerhamomyces anomalus beta-glucosidase, which catalyzes the hydrolysis of terminal beta-D-glucosyl residues

CAZY:  GH3
EC:  3.2.1.-
Gene Ontology:  GO:0005975|GO:0004553
SCOP:  4003202

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
28-428 6.74e-136

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


:

Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 404.85  E-value: 6.74e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  28 MTLAEKIGQMTLIERSVASEAVIRDFSIGSVLNraggwpFEDAKssnWADMIDGFQRsalESRLGIPIIYGIDAVHG--N 105
Cdd:COG1472   1 MTLEEKIGQLFQVGVTGEGAELIREGHVGGVIL------FDPAQ---WAELTNELQR---ATRLGIPLLIGTDAEHGvaN 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 106 NDVYGATIFPHNIGLGATRDADLVKRIGAATALEVRACGAHWAFAPCVAVVKDPRWGRCYESYGEVAQIVSEM-TSLVSG 184
Cdd:COG1472  69 RPAGGATVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDINRDPRWGRNFESFGEDPYLVGRMaAAYVRG 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 185 LQGEpskdhtngypflagrkNVVACAKHFVGDGGTNKAINEGNTILRYEDLERKHIAPYKKCISQGVSTVMASYSSWNGD 264
Cdd:COG1472 149 LQGN----------------GVAATAKHFAGHGDEETGRHTGPVDVSERELREIYLPPFEAAIKAGVASVMTAYNALNGV 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 265 KLHSHYFLLTEILKQKLGFKGYVVSDWEGLDRLSDPPGSNyRNCVKiGINAGIDMVMVPfkYEQFRNDLIDLVESGEVSM 344
Cdd:COG1472 213 PATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAEHYDPA-EAAVL-ALNAGLDLEMPG--GKAFIAALLEAVESGELSE 288
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 345 ARVNDAVERILRVKFVAGLFEFPLTDRSLLP-TVGCKEHRELAREAVRKSLVLLKNGryGEFLPLNCNAERILVVGTHAD 423
Cdd:COG1472 289 ERIDEAVRRILRLKFRLGLFDDPYVDPERAAeVVGSPEHRALAREAARESIVLLKND--NGLLPLAALAAGGALAADAAA 366

                ....*
gi 15232713 424 DLGYQ 428
Cdd:COG1472 367 AAAAA 371
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
394-602 2.91e-52

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


:

Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 178.66  E-value: 2.91e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   394 LVLLKNGryGEFLPLNCNAERILVVGTHADDLGYQCGGWTktmygqSGRITDGTTLLDAIKAAVGD------------ET 461
Cdd:pfam01915   1 IVLLKNE--NGLLPLPKKAKKIAVIGPNADDPPNGGGGSG------TGNPPYLVTPLDGIRARAGDlyadgahltvilSN 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   462 EVIYEKSPSEETLASGYRFSYAIVAVGESPYAETMG-DNSELVIPFNGSEIITTVAEK-IPTLVILFSGRPMFLEPQVLE 539
Cdd:pfam01915  73 GTADDDAGIAEAVAAAKDADVAIVFVGLDPETEGEGyDRTDLALPGNQDALIKAVAAAgKPTVVVLHSGGPVEMEPWAEE 152
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15232713   540 KAEALVAAWLPGTE-GQGIADVIFGDYDFRGKLPATWFKRVDQLPLDIESNgYLPLFPLGFGLN 602
Cdd:pfam01915 153 NVDAILAAWYPGQEgGNAIADVLFGDVNPSGKLPVTFPKSLEDLPAEGGPL-LPDLYPEGYGLS 215
 
Name Accession Description Interval E-value
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
28-428 6.74e-136

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 404.85  E-value: 6.74e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  28 MTLAEKIGQMTLIERSVASEAVIRDFSIGSVLNraggwpFEDAKssnWADMIDGFQRsalESRLGIPIIYGIDAVHG--N 105
Cdd:COG1472   1 MTLEEKIGQLFQVGVTGEGAELIREGHVGGVIL------FDPAQ---WAELTNELQR---ATRLGIPLLIGTDAEHGvaN 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 106 NDVYGATIFPHNIGLGATRDADLVKRIGAATALEVRACGAHWAFAPCVAVVKDPRWGRCYESYGEVAQIVSEM-TSLVSG 184
Cdd:COG1472  69 RPAGGATVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDINRDPRWGRNFESFGEDPYLVGRMaAAYVRG 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 185 LQGEpskdhtngypflagrkNVVACAKHFVGDGGTNKAINEGNTILRYEDLERKHIAPYKKCISQGVSTVMASYSSWNGD 264
Cdd:COG1472 149 LQGN----------------GVAATAKHFAGHGDEETGRHTGPVDVSERELREIYLPPFEAAIKAGVASVMTAYNALNGV 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 265 KLHSHYFLLTEILKQKLGFKGYVVSDWEGLDRLSDPPGSNyRNCVKiGINAGIDMVMVPfkYEQFRNDLIDLVESGEVSM 344
Cdd:COG1472 213 PATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAEHYDPA-EAAVL-ALNAGLDLEMPG--GKAFIAALLEAVESGELSE 288
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 345 ARVNDAVERILRVKFVAGLFEFPLTDRSLLP-TVGCKEHRELAREAVRKSLVLLKNGryGEFLPLNCNAERILVVGTHAD 423
Cdd:COG1472 289 ERIDEAVRRILRLKFRLGLFDDPYVDPERAAeVVGSPEHRALAREAARESIVLLKND--NGLLPLAALAAGGALAADAAA 366

                ....*
gi 15232713 424 DLGYQ 428
Cdd:COG1472 367 AAAAA 371
PRK15098 PRK15098
beta-glucosidase BglX;
18-610 3.49e-92

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 300.45  E-value: 3.49e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   18 EARVKDLLSRMTLAEKIGQMTLIerSVASE-------AVIRDFSIGSVLN---RAGGWPFEDAkssnwadmidGFQRSal 87
Cdd:PRK15098  35 DAFVTDLLKKMTLDEKIGQLRLI--SVGPDnpkeairEMIKAGQVGAIFNtvtRQDIRAMQDQ----------VMQLS-- 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   88 esRLGIPIIYGIDAVHGNNdvygaTIFPHNIGLGATRDADLVKRIGAATALEVRACGAHWAFAPCVAVVKDPRWGRCYES 167
Cdd:PRK15098 101 --RLKIPLFFAYDVVHGQR-----TVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISRDPRWGRASEG 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  168 YGEVAQIVSEMT-SLVSGLQGEPskdhtngypfLAGRKNVVACAKHFVGDGGTnkainEG----NTI----LR-YEDler 237
Cdd:PRK15098 174 FGEDTYLTSIMGkTMVKAMQGKS----------PADRYSVMTSVKHFALYGAV-----EGgrdyNTVdmspQRmFND--- 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  238 kHIAPYKKCISQGVSTVMASYSSWNGDKLHSHYFLLTEILKQKLGFKGYVVSDWEGLDRL------SDPpgsnyRNCVKI 311
Cdd:PRK15098 236 -YLPPYKAGLDAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFKGITVSDHGAIKELikhgvaADP-----EDAVRL 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  312 GINAGIDMVMVPFKYEQFrndLIDLVESGEVSMARVNDAVERILRVKFVAGLFEFPLTDrsllptVGCKE---------- 381
Cdd:PRK15098 310 ALKSGIDMSMSDEYYSKY---LPGLVKSGKVTMAELDDAVRHVLNVKYDMGLFNDPYSH------LGPKEsdpvdtnaes 380
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  382 --HRELAREAVRKSLVLLKNgrYGEFLPLNCNAeRILVVGTHADDLGYQCGGWTKtmygqSGRITDGTTLLDAIKAAVGD 459
Cdd:PRK15098 381 rlHRKEAREVARESLVLLKN--RLETLPLKKSG-TIAVVGPLADSQRDVMGSWSA-----AGVADQSVTVLQGIKNAVGD 452
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  460 ETEVIYEK--------------------------SPSE---ETLASGYRFSYAIVAVGESP-YAETMGDNSELVIPFNGS 509
Cdd:PRK15098 453 KAKVLYAKganvtddkgiidflnqyeeavkvdprSPQAmidEAVQAAKQADVVVAVVGEAQgMAHEASSRTDITIPQSQR 532
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  510 EIITTV-AEKIPTLVILFSGRPMFLEpQVLEKAEALVAAWLPGTEG-QGIADVIFGDYDFRGKLPATWFKRVDQLP---- 583
Cdd:PRK15098 533 DLIAALkATGKPLVLVLMNGRPLALV-KEDQQADAILETWFAGTEGgNAIADVLFGDYNPSGKLPMSFPRSVGQIPvyyn 611
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*.
gi 15232713  584 -LDI------------------ESNGylPLFPLGFGLNGDSVENSD 610
Cdd:PRK15098 612 hLNTgrpynpdkpnkytsryfdEANG--PLYPFGYGLSYTTFTVSD 655
Glyco_hydro_3 pfam00933
Glycosyl hydrolase family 3 N terminal domain;
29-357 1.82e-75

Glycosyl hydrolase family 3 N terminal domain;


Pssm-ID: 395747 [Multi-domain]  Cd Length: 316  Bit Score: 243.47  E-value: 1.82e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713    29 TLAEKIGQMTLIE-----RSVASEAVIRDFSIGSVLNraGGWPFEDAKSSnwADMIDGFQRSALESRLGIPIIYGIDAVH 103
Cdd:pfam00933   1 TLDEKIGQLLQVEvgegkPSHEEAELLKDYHVGGIIL--FGGNLEDWVQL--SDLIRYQRQAVEESRLGIPLLVAVDQEG 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   104 GNNDVYGA-TIFPHNIGLGATRDADLVKRIGAATALEVRACGAHWAFAPCVAVVKDPRWGRCYESYGEVAQIVSEM-TSL 181
Cdd:pfam00933  77 GRVQRFGEgTMFPSAIALAATSDPDLAKQMGWAMAREMRALGIDWDFAPVVDVARDPRWGIGERSFSEDPQLVSALaGAM 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   182 VSGLQGEPskdhtngypflagrknVVACAKHFVGDG-GTNKAINEGNTILR-YEDLERKHIAPYKKCISQGVSTVMAS-- 257
Cdd:pfam00933 157 IEGLQGAG----------------VLATVKHFPGHGhGATDSHKETPTTPRpEQRLRTVDLLPFQAAIEAGVDAVMAAhv 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   258 -YSSWNGDKLHSHYFLLTEILKQKLGFKGYVVSDWEGLDRLSDPpgSNYRNCVKIGINAGIDMVMVPfkyEQFRNDLIDL 336
Cdd:pfam00933 221 iYSSLDGTPATGSKYLLTDVLRKKWGFDGIVVSDDLSMKGIADH--GGPAEAVRRALEAGVDIALVP---EERTKYLKKV 295
                         330       340
                  ....*....|....*....|.
gi 15232713   337 VESGEVSMARVNDAVERILRV 357
Cdd:pfam00933 296 VKNGKLPMARIDAAVRRVLRL 316
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
394-602 2.91e-52

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 178.66  E-value: 2.91e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   394 LVLLKNGryGEFLPLNCNAERILVVGTHADDLGYQCGGWTktmygqSGRITDGTTLLDAIKAAVGD------------ET 461
Cdd:pfam01915   1 IVLLKNE--NGLLPLPKKAKKIAVIGPNADDPPNGGGGSG------TGNPPYLVTPLDGIRARAGDlyadgahltvilSN 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   462 EVIYEKSPSEETLASGYRFSYAIVAVGESPYAETMG-DNSELVIPFNGSEIITTVAEK-IPTLVILFSGRPMFLEPQVLE 539
Cdd:pfam01915  73 GTADDDAGIAEAVAAAKDADVAIVFVGLDPETEGEGyDRTDLALPGNQDALIKAVAAAgKPTVVVLHSGGPVEMEPWAEE 152
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15232713   540 KAEALVAAWLPGTE-GQGIADVIFGDYDFRGKLPATWFKRVDQLPLDIESNgYLPLFPLGFGLN 602
Cdd:pfam01915 153 NVDAILAAWYPGQEgGNAIADVLFGDVNPSGKLPVTFPKSLEDLPAEGGPL-LPDLYPEGYGLS 215
 
Name Accession Description Interval E-value
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
28-428 6.74e-136

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 404.85  E-value: 6.74e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  28 MTLAEKIGQMTLIERSVASEAVIRDFSIGSVLNraggwpFEDAKssnWADMIDGFQRsalESRLGIPIIYGIDAVHG--N 105
Cdd:COG1472   1 MTLEEKIGQLFQVGVTGEGAELIREGHVGGVIL------FDPAQ---WAELTNELQR---ATRLGIPLLIGTDAEHGvaN 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 106 NDVYGATIFPHNIGLGATRDADLVKRIGAATALEVRACGAHWAFAPCVAVVKDPRWGRCYESYGEVAQIVSEM-TSLVSG 184
Cdd:COG1472  69 RPAGGATVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDINRDPRWGRNFESFGEDPYLVGRMaAAYVRG 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 185 LQGEpskdhtngypflagrkNVVACAKHFVGDGGTNKAINEGNTILRYEDLERKHIAPYKKCISQGVSTVMASYSSWNGD 264
Cdd:COG1472 149 LQGN----------------GVAATAKHFAGHGDEETGRHTGPVDVSERELREIYLPPFEAAIKAGVASVMTAYNALNGV 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 265 KLHSHYFLLTEILKQKLGFKGYVVSDWEGLDRLSDPPGSNyRNCVKiGINAGIDMVMVPfkYEQFRNDLIDLVESGEVSM 344
Cdd:COG1472 213 PATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAEHYDPA-EAAVL-ALNAGLDLEMPG--GKAFIAALLEAVESGELSE 288
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713 345 ARVNDAVERILRVKFVAGLFEFPLTDRSLLP-TVGCKEHRELAREAVRKSLVLLKNGryGEFLPLNCNAERILVVGTHAD 423
Cdd:COG1472 289 ERIDEAVRRILRLKFRLGLFDDPYVDPERAAeVVGSPEHRALAREAARESIVLLKND--NGLLPLAALAAGGALAADAAA 366

                ....*
gi 15232713 424 DLGYQ 428
Cdd:COG1472 367 AAAAA 371
PRK15098 PRK15098
beta-glucosidase BglX;
18-610 3.49e-92

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 300.45  E-value: 3.49e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   18 EARVKDLLSRMTLAEKIGQMTLIerSVASE-------AVIRDFSIGSVLN---RAGGWPFEDAkssnwadmidGFQRSal 87
Cdd:PRK15098  35 DAFVTDLLKKMTLDEKIGQLRLI--SVGPDnpkeairEMIKAGQVGAIFNtvtRQDIRAMQDQ----------VMQLS-- 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   88 esRLGIPIIYGIDAVHGNNdvygaTIFPHNIGLGATRDADLVKRIGAATALEVRACGAHWAFAPCVAVVKDPRWGRCYES 167
Cdd:PRK15098 101 --RLKIPLFFAYDVVHGQR-----TVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISRDPRWGRASEG 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  168 YGEVAQIVSEMT-SLVSGLQGEPskdhtngypfLAGRKNVVACAKHFVGDGGTnkainEG----NTI----LR-YEDler 237
Cdd:PRK15098 174 FGEDTYLTSIMGkTMVKAMQGKS----------PADRYSVMTSVKHFALYGAV-----EGgrdyNTVdmspQRmFND--- 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  238 kHIAPYKKCISQGVSTVMASYSSWNGDKLHSHYFLLTEILKQKLGFKGYVVSDWEGLDRL------SDPpgsnyRNCVKI 311
Cdd:PRK15098 236 -YLPPYKAGLDAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFKGITVSDHGAIKELikhgvaADP-----EDAVRL 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  312 GINAGIDMVMVPFKYEQFrndLIDLVESGEVSMARVNDAVERILRVKFVAGLFEFPLTDrsllptVGCKE---------- 381
Cdd:PRK15098 310 ALKSGIDMSMSDEYYSKY---LPGLVKSGKVTMAELDDAVRHVLNVKYDMGLFNDPYSH------LGPKEsdpvdtnaes 380
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  382 --HRELAREAVRKSLVLLKNgrYGEFLPLNCNAeRILVVGTHADDLGYQCGGWTKtmygqSGRITDGTTLLDAIKAAVGD 459
Cdd:PRK15098 381 rlHRKEAREVARESLVLLKN--RLETLPLKKSG-TIAVVGPLADSQRDVMGSWSA-----AGVADQSVTVLQGIKNAVGD 452
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  460 ETEVIYEK--------------------------SPSE---ETLASGYRFSYAIVAVGESP-YAETMGDNSELVIPFNGS 509
Cdd:PRK15098 453 KAKVLYAKganvtddkgiidflnqyeeavkvdprSPQAmidEAVQAAKQADVVVAVVGEAQgMAHEASSRTDITIPQSQR 532
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  510 EIITTV-AEKIPTLVILFSGRPMFLEpQVLEKAEALVAAWLPGTEG-QGIADVIFGDYDFRGKLPATWFKRVDQLP---- 583
Cdd:PRK15098 533 DLIAALkATGKPLVLVLMNGRPLALV-KEDQQADAILETWFAGTEGgNAIADVLFGDYNPSGKLPMSFPRSVGQIPvyyn 611
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*.
gi 15232713  584 -LDI------------------ESNGylPLFPLGFGLNGDSVENSD 610
Cdd:PRK15098 612 hLNTgrpynpdkpnkytsryfdEANG--PLYPFGYGLSYTTFTVSD 655
Glyco_hydro_3 pfam00933
Glycosyl hydrolase family 3 N terminal domain;
29-357 1.82e-75

Glycosyl hydrolase family 3 N terminal domain;


Pssm-ID: 395747 [Multi-domain]  Cd Length: 316  Bit Score: 243.47  E-value: 1.82e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713    29 TLAEKIGQMTLIE-----RSVASEAVIRDFSIGSVLNraGGWPFEDAKSSnwADMIDGFQRSALESRLGIPIIYGIDAVH 103
Cdd:pfam00933   1 TLDEKIGQLLQVEvgegkPSHEEAELLKDYHVGGIIL--FGGNLEDWVQL--SDLIRYQRQAVEESRLGIPLLVAVDQEG 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   104 GNNDVYGA-TIFPHNIGLGATRDADLVKRIGAATALEVRACGAHWAFAPCVAVVKDPRWGRCYESYGEVAQIVSEM-TSL 181
Cdd:pfam00933  77 GRVQRFGEgTMFPSAIALAATSDPDLAKQMGWAMAREMRALGIDWDFAPVVDVARDPRWGIGERSFSEDPQLVSALaGAM 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   182 VSGLQGEPskdhtngypflagrknVVACAKHFVGDG-GTNKAINEGNTILR-YEDLERKHIAPYKKCISQGVSTVMAS-- 257
Cdd:pfam00933 157 IEGLQGAG----------------VLATVKHFPGHGhGATDSHKETPTTPRpEQRLRTVDLLPFQAAIEAGVDAVMAAhv 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   258 -YSSWNGDKLHSHYFLLTEILKQKLGFKGYVVSDWEGLDRLSDPpgSNYRNCVKIGINAGIDMVMVPfkyEQFRNDLIDL 336
Cdd:pfam00933 221 iYSSLDGTPATGSKYLLTDVLRKKWGFDGIVVSDDLSMKGIADH--GGPAEAVRRALEAGVDIALVP---EERTKYLKKV 295
                         330       340
                  ....*....|....*....|.
gi 15232713   337 VESGEVSMARVNDAVERILRV 357
Cdd:pfam00933 296 VKNGKLPMARIDAAVRRVLRL 316
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
394-602 2.91e-52

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 178.66  E-value: 2.91e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   394 LVLLKNGryGEFLPLNCNAERILVVGTHADDLGYQCGGWTktmygqSGRITDGTTLLDAIKAAVGD------------ET 461
Cdd:pfam01915   1 IVLLKNE--NGLLPLPKKAKKIAVIGPNADDPPNGGGGSG------TGNPPYLVTPLDGIRARAGDlyadgahltvilSN 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   462 EVIYEKSPSEETLASGYRFSYAIVAVGESPYAETMG-DNSELVIPFNGSEIITTVAEK-IPTLVILFSGRPMFLEPQVLE 539
Cdd:pfam01915  73 GTADDDAGIAEAVAAAKDADVAIVFVGLDPETEGEGyDRTDLALPGNQDALIKAVAAAgKPTVVVLHSGGPVEMEPWAEE 152
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15232713   540 KAEALVAAWLPGTE-GQGIADVIFGDYDFRGKLPATWFKRVDQLPLDIESNgYLPLFPLGFGLN 602
Cdd:pfam01915 153 NVDAILAAWYPGQEgGNAIADVLFGDVNPSGKLPVTFPKSLEDLPAEGGPL-LPDLYPEGYGLS 215
PLN03080 PLN03080
Probable beta-xylosidase; Provisional
7-576 3.78e-46

Probable beta-xylosidase; Provisional


Pssm-ID: 178629 [Multi-domain]  Cd Length: 779  Bit Score: 174.28  E-value: 3.78e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713    7 SYVYKNREAPVEARVKDLLSRMTLAEKIGQMTliersvaseavirdfsigsvlNRAGGWPfedakssnwadmidgfqrsa 86
Cdd:PLN03080  39 AYPFCNASLPIPARARSLVSLLTLDEKIAQLS---------------------NTAAGVP-------------------- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713   87 lesRLGIPII-YGIDAVHGNND-----------VYGATIFPHNIGLGATRDADLVKRIGAATALEVRAC----GAHWAF- 149
Cdd:PLN03080  78 ---RLGIPPYeWWSESLHGLADngpgvsfnsgpVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMynagQAGLTFw 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  150 APCVAVVKDPRWGRCYESYGEVAQIVSEMT-SLVSGLQGEPSKdhtNGYPFLA-GRKNVVACAKHFVG---DGGTNKAIN 224
Cdd:PLN03080 155 APNINIFRDPRWGRGQETPGEDPAVASAYSvEFVKGFQGGKWK---KVRDDGEdGKLMLSACCKHYTAydlEKWGNFSRY 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  225 EGNTILRYEDLERKHIAPYKKCISQG-VSTVMASYSSWNGDKLHSHYFLLTEIlKQKLGFKGYVVSDWEGLDRLSDppGS 303
Cdd:PLN03080 232 TFNAVVTEQDMEDTYQPPFKSCIQEGkASCLMCSYNQVNGVPACARKDLLQKA-RDEWGFQGYITSDCDAVATIFE--YQ 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  304 NYRN----CVKIGINAGIDMVMVPFKYEQFRNdlidLVESGEVSMARVNDAVERILRVKFVAGLFEFPLTDR---SLLPT 376
Cdd:PLN03080 309 TYTKspedAVADVLKAGMDINCGSYMLRHTQS----AIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGwygKLGPN 384
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  377 VGC-KEHRELAREAVRKSLVLLKNGRygEFLPLNCNAER-ILVVGTHADDLGYQCGGWTktmygqsGRITDGTTLLDAIK 454
Cdd:PLN03080 385 NVCtKEHRELALEAARQGIVLLKNDK--KFLPLNKSEVSsLAIIGPMANDPYNLGGDYT-------GVPCQPTTLFKGLQ 455
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  455 AAVGDETEVIYEKSPS-------EETLASGYRFSYAIVAVGESPYAETMG-DNSELVIPFNGSEIITTVAE--KIPTLVI 524
Cdd:PLN03080 456 AYVKKTSFAAGCKDVScnsdtgfGEAIAIAKRADFVVVVAGLDLSQETEDhDRVSLLLPGKQMDLISSVASvsKKPVVLV 535
                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 15232713  525 LFSGRPMFLEpqvLEKAEALVAA--WL--PG-TEGQGIADVIFGDYDFRGKLPATWF 576
Cdd:PLN03080 536 LTGGGPVDVS---FAKQDPRIASilWIgyPGeVGGQALAEIIFGDYNPGGRLPMTWY 589
PRK05337 PRK05337
beta-hexosaminidase; Provisional
120-322 7.17e-09

beta-hexosaminidase; Provisional


Pssm-ID: 235417 [Multi-domain]  Cd Length: 337  Bit Score: 57.86  E-value: 7.17e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  120 LGATRDADLVKRIGAAT------ALEVRACGAHWAFAP------CVAVVKDpRwgrcyeSYGEVAQIVSEM-TSLVSGLQ 186
Cdd:PRK05337  84 FGALWDRDPLEALKLAEeagwlmAAELRACGIDLSFAPvldldgISAVIGD-R------AFHRDPQVVAALaSAFIDGMH 156
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15232713  187 gepskdhtngypfLAGRKnvvACAKHFVGDGG----TNKAINEGNtilR-YEDLERKHIAPYKKCISQGVSTVM------ 255
Cdd:PRK05337 157 -------------AAGMA---ATGKHFPGHGAveadSHVETPVDE---RpLEEIRAEDMAPFRALIAAGLDAVMpahviy 217
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15232713  256 -------ASYSS-WngdklhshyflLTEILKQKLGFKGYVVSD---WEGLDRLSDPPGsnyrnCVKIGINAGIDMVMV 322
Cdd:PRK05337 218 pqvdprpAGFSRyW-----------LQDILRQELGFDGVIFSDdlsMEGAAVAGDYAE-----RAQAALDAGCDMVLV 279
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH