Pectate lyase family protein [Arabidopsis thaliana]
polysaccharide lyase family 1 protein( domain architecture ID 10652760)
polysaccharide lyase family 1 protein such as pectate lyase that catalyzes the eliminative cleavage of pectate to yield oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at the non-reducing ends, and pectin lyase that catalyzes the eliminative cleavage of the methyl ester pectin
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
Amb_all | smart00656 | Amb_all domain; |
178-373 | 4.90e-82 | ||||
Amb_all domain; : Pssm-ID: 214765 Cd Length: 190 Bit Score: 251.04 E-value: 4.90e-82
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Name | Accession | Description | Interval | E-value | ||||||
Amb_all | smart00656 | Amb_all domain; |
178-373 | 4.90e-82 | ||||||
Amb_all domain; Pssm-ID: 214765 Cd Length: 190 Bit Score: 251.04 E-value: 4.90e-82
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PelB | COG3866 | Pectate lyase [Carbohydrate transport and metabolism]; |
129-442 | 1.74e-52 | ||||||
Pectate lyase [Carbohydrate transport and metabolism]; Pssm-ID: 443075 [Multi-domain] Cd Length: 326 Bit Score: 179.41 E-value: 1.74e-52
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Pectate_lyase_4 | pfam00544 | Pectate lyase; This enzyme forms a right handed beta helix structure. Pectate lyase is an ... |
194-369 | 2.66e-22 | ||||||
Pectate lyase; This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. Pssm-ID: 366158 Cd Length: 211 Bit Score: 94.58 E-value: 2.66e-22
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Name | Accession | Description | Interval | E-value | ||||||
Amb_all | smart00656 | Amb_all domain; |
178-373 | 4.90e-82 | ||||||
Amb_all domain; Pssm-ID: 214765 Cd Length: 190 Bit Score: 251.04 E-value: 4.90e-82
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PelB | COG3866 | Pectate lyase [Carbohydrate transport and metabolism]; |
129-442 | 1.74e-52 | ||||||
Pectate lyase [Carbohydrate transport and metabolism]; Pssm-ID: 443075 [Multi-domain] Cd Length: 326 Bit Score: 179.41 E-value: 1.74e-52
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Pectate_lyase_4 | pfam00544 | Pectate lyase; This enzyme forms a right handed beta helix structure. Pectate lyase is an ... |
194-369 | 2.66e-22 | ||||||
Pectate lyase; This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. Pssm-ID: 366158 Cd Length: 211 Bit Score: 94.58 E-value: 2.66e-22
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NosD | COG3420 | Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion ... |
203-295 | 9.10e-05 | ||||||
Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion transport and metabolism]; Pssm-ID: 442646 [Multi-domain] Cd Length: 343 Bit Score: 44.52 E-value: 9.10e-05
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Beta_helix | pfam13229 | Right handed beta helix region; This region contains a parallel beta helix region that shares ... |
210-299 | 4.18e-03 | ||||||
Right handed beta helix region; This region contains a parallel beta helix region that shares some similarity with Pectate lyases. Pssm-ID: 463811 [Multi-domain] Cd Length: 158 Bit Score: 37.77 E-value: 4.18e-03
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Beta_helix | pfam13229 | Right handed beta helix region; This region contains a parallel beta helix region that shares ... |
208-299 | 7.93e-03 | ||||||
Right handed beta helix region; This region contains a parallel beta helix region that shares some similarity with Pectate lyases. Pssm-ID: 463811 [Multi-domain] Cd Length: 158 Bit Score: 37.00 E-value: 7.93e-03
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Blast search parameters | ||||
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