|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02336 |
PLN02336 |
phosphoethanolamine N-methyltransferase |
17-491 |
0e+00 |
|
phosphoethanolamine N-methyltransferase
Pssm-ID: 177970 [Multi-domain] Cd Length: 475 Bit Score: 1029.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 17 IEHSADLTVEAMMLDSRASDLDKEERPEVLSLLPPYEGKSVLELGAGIGRFTGELAQKAGELIALDFIDNVIKKNESING 96
Cdd:PLN02336 1 KEHSVDLTVEAMMLDSKASDLDKEERPEILSLLPPYEGKSVLELGAGIGRFTGELAKKAGQVIALDFIESVIKKNESING 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 97 HYKNVKFMCADVTSPDLKITDGSLDLIFSNWLLMYLSDKEVELLAERMVGWIKVGGYIFFRESCFHQSGDSKRKSNPTHY 176
Cdd:PLN02336 81 HYKNVKFMCADVTSPDLNISDGSVDLIFSNWLLMYLSDKEVENLAERMVKWLKVGGYIFFRESCFHQSGDSKRKNNPTHY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 177 REPRFYSKVFQECQTRDAAGNSFELSMIGCKCIGAYVKNKKNQNQICWIWQKVSSENDRGFQRFLDNVQYKSSGILRYER 256
Cdd:PLN02336 161 REPRFYTKVFKECHTRDEDGNSFELSLVGCKCIGAYVKNKKNQNQICWLWQKVSSTNDKGFQRFLDNVQYKSSGILRYER 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 257 VFGQGFVSTGGLETTKEFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALERAIGLSCSVEFEV 336
Cdd:PLN02336 241 VFGEGFVSTGGLETTKEFVDKLDLKPGQKVLDVGCGIGGGDFYMAENFDVHVVGIDLSVNMISFALERAIGRKCSVEFEV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 337 ADCTTKHYPDNSFDVIYSRDTILHIQDKPALFRTFFKWLKPGGKVLISDYCRSPKTPSAEFSEYIKQRGYDLHDVQAYGQ 416
Cdd:PLN02336 321 ADCTKKTYPDNSFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISDYCRSPGTPSPEFAEYIKQRGYDLHDVQAYGQ 400
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30684743 417 MLKDAGFTDVIAEDRTDQFMQVLKRELDRVEKEKEKFISDFSKEDYDDIVGGWKSKLERCASDEQKWGLFIANKN 491
Cdd:PLN02336 401 MLKDAGFDDVIAEDRTDQFLQVLQRELDAVEKEKDEFISDFSEEDYNDIVGGWKAKLVRSSSGEQKWGLFIAKKK 475
|
|
| PTZ00098 |
PTZ00098 |
phosphoethanolamine N-methyltransferase; Provisional |
239-491 |
5.53e-73 |
|
phosphoethanolamine N-methyltransferase; Provisional
Pssm-ID: 173391 [Multi-domain] Cd Length: 263 Bit Score: 231.78 E-value: 5.53e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 239 RFLDNVQYKSSGILRYERVFGQGFVSTGGLETTKEFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMI 318
Cdd:PTZ00098 9 TYLENNQYSDEGIKAYEFIFGEDYISSGGIEATTKILSDIELNENSKVLDIGSGLGGGCKYINEKYGAHVHGVDICEKMV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 319 SFALERAIGLScSVEFEVADCTTKHYPDNSFDVIYSRDTILHI--QDKPALFRTFFKWLKPGGKVLISDYCRSPKTP-SA 395
Cdd:PTZ00098 89 NIAKLRNSDKN-KIEFEANDILKKDFPENTFDMIYSRDAILHLsyADKKKLFEKCYKWLKPNGILLITDYCADKIENwDE 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 396 EFSEYIKQRGYDLHDVQAYGQMLKDAGFTDVIAEDRTDQFMQVLKRELDRVEKEKEKFISDFSKEDYDDIVGGWKSKLER 475
Cdd:PTZ00098 168 EFKAYIKKRKYTLIPIQEYGDLIKSCNFQNVVAKDISDYWLELLQVELKKLEEKKEEFLKLYSEKEYNSLKDGWTRKIKD 247
|
250
....*....|....*.
gi 30684743 476 CASDEQKWGLFIANKN 491
Cdd:PTZ00098 248 TKRKLQKWGYFKAQKM 263
|
|
| Cfa |
COG2230 |
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ... |
237-385 |
1.96e-32 |
|
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];
Pssm-ID: 441831 [Multi-domain] Cd Length: 158 Bit Score: 121.19 E-value: 1.96e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 237 FQRFLDNVQYKSSGIlrYERvfGQGFVSTGGLETTKEFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVN 316
Cdd:COG2230 10 YRLFLDPTMTYSCAY--FED--PDDTLEEAQEAKLDLILRKLGLKPGMRVLDIGCGWGGLALYLARRYGVRVTGVTLSPE 85
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30684743 317 MISFALERA--IGLSCSVEFEVADCtTKHYPDNSFDVIYSRDTILHIQDK--PALFRTFFKWLKPGGKVLISD 385
Cdd:COG2230 86 QLEYARERAaeAGLADRVEVRLADY-RDLPADGQFDAIVSIGMFEHVGPEnyPAYFAKVARLLKPGGRLLLHT 157
|
|
| UbiE |
COG2226 |
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ... |
269-424 |
9.47e-32 |
|
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis
Pssm-ID: 441828 [Multi-domain] Cd Length: 143 Bit Score: 118.94 E-value: 9.47e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 269 ETTKEFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKfDVHVVGIDLSVNMISFALERAIGLSCSVEFEVADCTTKHYPDNS 348
Cdd:COG2226 9 DGREALLAALGLRPGARVLDLGCGTGRLALALAER-GARVTGVDISPEMLELARERAAEAGLNVEFVVGDAEDLPFPDGS 87
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30684743 349 FDVIYSRDTILHIQDKPALFRTFFKWLKPGGKVLISDYCRspktpsaefseyikqrgydlHDVQAYGQMLKDAGFT 424
Cdd:COG2226 88 FDLVISSFVLHHLPDPERALAEIARVLKPGGRLVVVDFSP--------------------PDLAELEELLAEAGFE 143
|
|
| Methyltransf_25 |
pfam13649 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
286-379 |
1.24e-27 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 463945 [Multi-domain] Cd Length: 96 Bit Score: 105.72 E-value: 1.24e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 286 VLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALERAIGLSCSVEFEVADCTTKHYPDNSFDVIYSRDTILHI--QD 363
Cdd:pfam13649 1 VLDLGCGTGRLTLALARRGGARVTGVDLSPEMLERARERAAEAGLNVEFVQGDAEDLPFPDGSFDLVVSSGVLHHLpdPD 80
|
90
....*....|....*.
gi 30684743 364 KPALFRTFFKWLKPGG 379
Cdd:pfam13649 81 LEAALREIARVLKPGG 96
|
|
| UbiG |
COG2227 |
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
273-386 |
7.65e-26 |
|
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 102.02 E-value: 7.65e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 273 EFVEKMnLKPGQKVLDVGCGIGGGDFYMAEKFdVHVVGIDLSVNMISFALERAIGLScsVEFEVADCTTKHYPDNSFDVI 352
Cdd:COG2227 16 ALLARL-LPAGGRVLDVGCGTGRLALALARRG-ADVTGVDISPEALEIARERAAELN--VDFVQGDLEDLPLEDGSFDLV 91
|
90 100 110
....*....|....*....|....*....|....
gi 30684743 353 YSRDTILHIQDKPALFRTFFKWLKPGGKVLISDY 386
Cdd:COG2227 92 ICSEVLEHLPDPAALLRELARLLKPGGLLLLSTP 125
|
|
| Tam |
COG4106 |
Trans-aconitate methyltransferase [Energy production and conversion]; |
282-385 |
2.38e-22 |
|
Trans-aconitate methyltransferase [Energy production and conversion];
Pssm-ID: 443282 [Multi-domain] Cd Length: 100 Bit Score: 91.42 E-value: 2.38e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 282 PGQKVLDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALERAIGlscsVEFEVADCTTKHyPDNSFDVIYSRDTILH 360
Cdd:COG4106 1 PPRRVLDLGCGTGRLTALLAERFpGARVTGVDLSPEMLARARARLPN----VRFVVADLRDLD-PPEPFDLVVSNAALHW 75
|
90 100
....*....|....*....|....*
gi 30684743 361 IQDKPALFRTFFKWLKPGGKVLISD 385
Cdd:COG4106 76 LPDHAALLARLAAALAPGGVLAVQV 100
|
|
| Methyltransf_11 |
pfam08241 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
287-383 |
3.48e-22 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 462406 [Multi-domain] Cd Length: 94 Bit Score: 90.80 E-value: 3.48e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 287 LDVGCGIGGGDFYMAEKFdVHVVGIDLSVNMISFALERAIGLScsVEFEVADCTTKHYPDNSFDVIYSRDTILHIQDKPA 366
Cdd:pfam08241 1 LDVGCGTGLLTELLARLG-ARVTGVDISPEMLELAREKAPREG--LTFVVGDAEDLPFPDNSFDLVLSSEVLHHVEDPER 77
|
90
....*....|....*..
gi 30684743 367 LFRTFFKWLKPGGKVLI 383
Cdd:pfam08241 78 ALREIARVLKPGGILII 94
|
|
| PRK08317 |
PRK08317 |
hypothetical protein; Provisional |
276-385 |
6.06e-22 |
|
hypothetical protein; Provisional
Pssm-ID: 181382 [Multi-domain] Cd Length: 241 Bit Score: 94.62 E-value: 6.06e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 276 EKMNLKPGQKVLDVGCGIGGGDFYMAEKF--DVHVVGIDLSVNMISFALERAIGLSCSVEFEVADCTTKHYPDNSFDVIY 353
Cdd:PRK08317 13 ELLAVQPGDRVLDVGCGPGNDARELARRVgpEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVR 92
|
90 100 110
....*....|....*....|....*....|..
gi 30684743 354 SRDTILHIQDKPALFRTFFKWLKPGGKVLISD 385
Cdd:PRK08317 93 SDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124
|
|
| COG4976 |
COG4976 |
Predicted methyltransferase, contains TPR repeat [General function prediction only]; |
272-424 |
2.40e-21 |
|
Predicted methyltransferase, contains TPR repeat [General function prediction only];
Pssm-ID: 444001 [Multi-domain] Cd Length: 181 Bit Score: 91.21 E-value: 2.40e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 272 KEFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKFDvHVVGIDLSVNMISFALERAIGlscsVEFEVADCTTKHYPDNSFDV 351
Cdd:COG4976 36 EELLARLPPGPFGRVLDLGCGTGLLGEALRPRGY-RLTGVDLSEEMLAKAREKGVY----DRLLVADLADLAEPDGRFDL 110
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30684743 352 IYSRDTILHIQDKPALFRTFFKWLKPGGKVLISdycrspktpsaefSEYIKQRGYDLHDVQAYGQMLKDAGFT 424
Cdd:COG4976 111 IVAADVLTYLGDLAAVFAGVARALKPGGLFIFS-------------VEDADGSGRYAHSLDYVRDLLAAAGFE 170
|
|
| SmtA |
COG0500 |
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ... |
280-386 |
9.78e-21 |
|
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];
Pssm-ID: 440266 [Multi-domain] Cd Length: 199 Bit Score: 89.98 E-value: 9.78e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 280 LKPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALERAIGLSCS-VEFEVADCT-TKHYPDNSFDVIYSRDT 357
Cdd:COG0500 24 LPKGGRVLDLGCGTGRNLLALAARFGGRVIGIDLSPEAIALARARAAKAGLGnVEFLVADLAeLDPLPAESFDLVVAFGV 103
|
90 100 110
....*....|....*....|....*....|.
gi 30684743 358 ILHIQDKP--ALFRTFFKWLKPGGKVLISDY 386
Cdd:COG0500 104 LHHLPPEEreALLRELARALKPGGVLLLSAS 134
|
|
| Methyltransf_31 |
pfam13847 |
Methyltransferase domain; This family appears to have methyltransferase activity. |
280-422 |
2.47e-20 |
|
Methyltransferase domain; This family appears to have methyltransferase activity.
Pssm-ID: 463998 [Multi-domain] Cd Length: 150 Bit Score: 87.47 E-value: 2.47e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 280 LKPGQKVLDVGCGIGGGDFYMAEK--FDVHVVGIDLSVNMISFALERA--IGLScSVEFEVADCT--TKHYPDNSFDVIY 353
Cdd:pfam13847 1 IDKGMRVLDLGCGTGHLSFELAEElgPNAEVVGIDISEEAIEKARENAqkLGFD-NVEFEQGDIEelPELLEDDKFDVVI 79
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30684743 354 SRDTILHIQDKPALFRTFFKWLKPGGKVLISDYCRSPKTPSA--EFSEYIKQRGYDLHDVQAYGQMLKDAG 422
Cdd:pfam13847 80 SNCVLNHIPDPDKVLQEILRVLKPGGRLIISDPDSLAELPAHvkEDSTYYAGCVGGAILKKKLYELLEEAG 150
|
|
| PLN02244 |
PLN02244 |
tocopherol O-methyltransferase |
235-430 |
4.13e-20 |
|
tocopherol O-methyltransferase
Pssm-ID: 215135 [Multi-domain] Cd Length: 340 Bit Score: 91.34 E-value: 4.13e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 235 RGFQRFLDnvqyKSSGIlrYERVFGQ----GFVSTGG------------LETTKEF--VEKMNLKPGQKVLDVGCGIGGG 296
Cdd:PLN02244 59 EGIAEFYD----ESSGV--WEDVWGEhmhhGYYDPGAsrgdhrqaqirmIEESLAWagVPDDDEKRPKRIVDVGCGIGGS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 297 DFYMAEKFDVHVVGIDLSVNMISFA--LERAIGLSCSVEFEVADCTTKHYPDNSFDVIYSRDTILHIQDKPALFRTFFKW 374
Cdd:PLN02244 133 SRYLARKYGANVKGITLSPVQAARAnaLAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMESGEHMPDKRKFVQELARV 212
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30684743 375 LKPGGKVLISDYCRSPKTPSAEFSEYIKQ-------RGYDLHD---VQAYGQMLKDAGFTDVIAED 430
Cdd:PLN02244 213 AAPGGRIIIVTWCHRDLEPGETSLKPDEQklldkicAAYYLPAwcsTSDYVKLAESLGLQDIKTED 278
|
|
| Methyltransf_23 |
pfam13489 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
279-426 |
1.23e-19 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 404385 [Multi-domain] Cd Length: 162 Bit Score: 85.94 E-value: 1.23e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 279 NLKPGQKVLDVGCGIGggdfYMAEKFD---VHVVGIDLSVNMIsfalERAIGLSCSVEFEVADCTtkhYPDNSFDVIYSR 355
Cdd:pfam13489 19 KLPSPGRVLDFGCGTG----IFLRLLRaqgFSVTGVDPSPIAI----ERALLNVRFDQFDEQEAA---VPAGKFDVIVAR 87
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30684743 356 DTILHIQDKPALFRTFFKWLKPGGKVLISDYCRSPKTP-SAEFSEYIKQRG--YDLHDVQAYGQMLKDAGFTDV 426
Cdd:pfam13489 88 EVLEHVPDPPALLRQIAALLKPGGLLLLSTPLASDEADrLLLEWPYLRPRNghISLFSARSLKRLLEEAGFEVV 161
|
|
| ubiE |
PRK00216 |
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol ... |
272-426 |
3.72e-18 |
|
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE;
Pssm-ID: 234689 [Multi-domain] Cd Length: 239 Bit Score: 83.66 E-value: 3.72e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 272 KEFVEKMNLKPGQKVLDVGCGIggGD--FYMAEKFDV--HVVGIDLSVNMISFALERAI--GLSCSVEFEVADCTTKHYP 345
Cdd:PRK00216 41 RKTIKWLGVRPGDKVLDLACGT--GDlaIALAKAVGKtgEVVGLDFSEGMLAVGREKLRdlGLSGNVEFVQGDAEALPFP 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 346 DNSFDVIysrdTI---L-HIQDKPALFRTFFKWLKPGGKVLIsdycrspktpsAEFSE---YIKQRGYDLH--------- 409
Cdd:PRK00216 119 DNSFDAV----TIafgLrNVPDIDKALREMYRVLKPGGRLVI-----------LEFSKptnPPLKKAYDFYlfkvlplig 183
|
170 180 190
....*....|....*....|....*....|....*...
gi 30684743 410 -----DVQAY----------------GQMLKDAGFTDV 426
Cdd:PRK00216 184 kliskNAEAYsylaesirafpdqeelAAMLEEAGFERV 221
|
|
| UbiE |
COG2226 |
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ... |
31-158 |
2.25e-17 |
|
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis
Pssm-ID: 441828 [Multi-domain] Cd Length: 143 Bit Score: 78.88 E-value: 2.25e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 31 DSRASDLDkeERPEVLSLLPPYEGKSVLELGAGIGRFTGELAQKAGELIALDFIDNVIKK-NESINGHYKNVKFMCADVT 109
Cdd:COG2226 2 DRVAARYD--GREALLAALGLRPGARVLDLGCGTGRLALALAERGARVTGVDISPEMLELaRERAAEAGLNVEFVVGDAE 79
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 30684743 110 spDLKITDGSLDLIFSNWLLMYLSDKEvELLAErMVGWIKVGGYIFFRE 158
Cdd:COG2226 80 --DLPFPDGSFDLVISSFVLHHLPDPE-RALAE-IARVLKPGGRLVVVD 124
|
|
| Methyltransf_12 |
pfam08242 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
287-381 |
3.89e-17 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 400515 [Multi-domain] Cd Length: 98 Bit Score: 76.64 E-value: 3.89e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 287 LDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALER--AIGLSCSVEFEVADCTTKHYPDNSFDVIYSRDTILHIQD 363
Cdd:pfam08242 1 LEIGCGTGTLLRALLEALpGLEYTGLDISPAALEAARERlaALGLLNAVRVELFQLDLGELDPGSFDVVVASNVLHHLAD 80
|
90
....*....|....*...
gi 30684743 364 KPALFRTFFKWLKPGGKV 381
Cdd:pfam08242 81 PRAVLRNIRRLLKPGGVL 98
|
|
| arsM |
PRK11873 |
arsenite methyltransferase; |
278-432 |
3.92e-16 |
|
arsenite methyltransferase;
Pssm-ID: 237007 [Multi-domain] Cd Length: 272 Bit Score: 78.45 E-value: 3.92e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 278 MNLKPGQKVLDVGCGiGGGDFYMAEKF---DVHVVGIDLSVNMISFALERA--IGLScSVEFEVADCTTKHYPDNSFDVI 352
Cdd:PRK11873 73 AELKPGETVLDLGSG-GGFDCFLAARRvgpTGKVIGVDMTPEMLAKARANArkAGYT-NVEFRLGEIEALPVADNSVDVI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 353 YSRDTILHIQDKPALFRTFFKWLKPGGKVLISDYcrspkTPSAEFSEYIKQRGyDLH--------DVQAYGQMLKDAGFT 424
Cdd:PRK11873 151 ISNCVINLSPDKERVFKEAFRVLKPGGRFAISDV-----VLRGELPEEIRNDA-ELYagcvagalQEEEYLAMLAEAGFV 224
|
....*....
gi 30684743 425 DV-IAEDRT 432
Cdd:PRK11873 225 DItIQPKRE 233
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
285-386 |
4.80e-16 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 74.00 E-value: 4.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 285 KVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALERAIGLSCS-VEFEVADCTT-KHYPDNSFDVIYSRDTILHI- 361
Cdd:cd02440 1 RVLDLGCGTGALALALASGPGARVTGVDISPVALELARKAAAALLADnVEVLKGDAEElPPEADESFDVIISDPPLHHLv 80
|
90 100
....*....|....*....|....*
gi 30684743 362 QDKPALFRTFFKWLKPGGKVLISDY 386
Cdd:cd02440 81 EDLARFLEEARRLLKPGGVLVLTLV 105
|
|
| CMAS |
pfam02353 |
Mycolic acid cyclopropane synthetase; This family consist of ... |
276-463 |
5.28e-16 |
|
Mycolic acid cyclopropane synthetase; This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.
Pssm-ID: 396777 [Multi-domain] Cd Length: 272 Bit Score: 78.14 E-value: 5.28e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 276 EKMNLKPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALER--AIGLSCSVEFEVADcttkhYPD--NSFDV 351
Cdd:pfam02353 55 DKLGLKPGMTLLDIGCGWGGLMRRAAERYDVNVVGLTLSKNQYKLARKRvaAEGLARKVEVLLQD-----YRDfdEPFDR 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 352 IYSRDTILHIQDK--PALFRTFFKWLKPGGKVLI-SDYCRSPK------TPSAEFSEYIKQRGY--DLHDVQAYGQmlkD 420
Cdd:pfam02353 130 IVSVGMFEHVGHEnyDTFFKKLYNLLPPGGLMLLhTITGLHPDetsergLPLKFIDKYIFPGGElpSISMIVESSS---E 206
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 30684743 421 AGFTDVIAEDRTDQFMQVLKRELDRVEKEKEKFISDFSKEDYD 463
Cdd:pfam02353 207 AGFTVEDVESLRPHYAKTLDLWAENLQANKDEAIALQSEEFYR 249
|
|
| Methyltransf_25 |
pfam13649 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
57-152 |
6.72e-15 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 463945 [Multi-domain] Cd Length: 96 Bit Score: 70.29 E-value: 6.72e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 57 VLELGAGIGRFTGELAQKAG-ELIALDFIDNVIKK-NESINGHYKNVKFMCADVTspDLKITDGSLDLIFSNWLLMYLSD 134
Cdd:pfam13649 1 VLDLGCGTGRLTLALARRGGaRVTGVDLSPEMLERaRERAAEAGLNVEFVQGDAE--DLPFPDGSFDLVVSSGVLHHLPD 78
|
90
....*....|....*...
gi 30684743 135 KEVELLAERMVGWIKVGG 152
Cdd:pfam13649 79 PDLEAALREIARVLKPGG 96
|
|
| PRK11705 |
PRK11705 |
cyclopropane fatty acyl phospholipid synthase; |
276-383 |
4.39e-14 |
|
cyclopropane fatty acyl phospholipid synthase;
Pssm-ID: 183282 Cd Length: 383 Bit Score: 73.73 E-value: 4.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 276 EKMNLKPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALERAIGLscSVEFEVADcttkhYPD--NSFDVIY 353
Cdd:PRK11705 161 RKLQLKPGMRVLDIGCGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGL--PVEIRLQD-----YRDlnGQFDRIV 233
|
90 100 110
....*....|....*....|....*....|....
gi 30684743 354 SRDTILHIQDKPalFRTFFK----WLKPGGKVLI 383
Cdd:PRK11705 234 SVGMFEHVGPKN--YRTYFEvvrrCLKPDGLFLL 265
|
|
| Methyltransf_11 |
pfam08241 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
58-156 |
1.28e-13 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 462406 [Multi-domain] Cd Length: 94 Bit Score: 66.53 E-value: 1.28e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 58 LELGAGIGRFTGELAQKAGELIALDFIDNVIKKNESiNGHYKNVKFMCADVTspDLKITDGSLDLIFSNWLLMYLSDKEv 137
Cdd:pfam08241 1 LDVGCGTGLLTELLARLGARVTGVDISPEMLELARE-KAPREGLTFVVGDAE--DLPFPDNSFDLVLSSEVLHHVEDPE- 76
|
90
....*....|....*....
gi 30684743 138 ELLAErMVGWIKVGGYIFF 156
Cdd:pfam08241 77 RALRE-IARVLKPGGILII 94
|
|
| BioC |
TIGR02072 |
malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin ... |
273-431 |
3.91e-13 |
|
malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]
Pssm-ID: 273953 [Multi-domain] Cd Length: 240 Bit Score: 68.85 E-value: 3.91e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 273 EFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALERaigLSCSVEFEVADCTTKHYPDNSFDV 351
Cdd:TIGR02072 25 ALLKEKGIFIPASVLDIGCGTGYLTRALLKRFpQAEFIALDISAGMLAQAKTK---LSENVQFICGDAEKLPLEDSSFDL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 352 IYSRDTILHIQDKPALFRTFFKWLKPGGKVLISDYCrsPKTpSAEFSEYIKQRGYDLHDVQAYGQMLKDAgFTDVIAEDR 431
Cdd:TIGR02072 102 IVSNLALQWCDDLSQALSELARVLKPGGLLAFSTFG--PGT-LHELRQSFGQHGLRYLSLDELKALLKNS-FELLTLEEE 177
|
|
| Tam |
COG4106 |
Trans-aconitate methyltransferase [Energy production and conversion]; |
53-156 |
8.62e-13 |
|
Trans-aconitate methyltransferase [Energy production and conversion];
Pssm-ID: 443282 [Multi-domain] Cd Length: 100 Bit Score: 64.46 E-value: 8.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 53 EGKSVLELGAGIGRFTGELAQK--AGELIALDFIDNVIkknESINGHYKNVKFMCADVTSPDLkitDGSLDLIFSNWLLM 130
Cdd:COG4106 1 PPRRVLDLGCGTGRLTALLAERfpGARVTGVDLSPEML---ARARARLPNVRFVVADLRDLDP---PEPFDLVVSNAALH 74
|
90 100
....*....|....*....|....*.
gi 30684743 131 YLSDKEvELLAeRMVGWIKVGGYIFF 156
Cdd:COG4106 75 WLPDHA-ALLA-RLAAALAPGGVLAV 98
|
|
| UbiG |
COG2227 |
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
28-156 |
1.25e-12 |
|
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 64.65 E-value: 1.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 28 MMLDSRASDLDKEERPEVLSLLPPyeGKSVLELGAGIGRFTGELAQKAGELIALDFIDNVIKKNESiNGHYKNVKFMCAD 107
Cdd:COG2227 1 MSDPDARDFWDRRLAALLARLLPA--GGRVLDVGCGTGRLALALARRGADVTGVDISPEALEIARE-RAAELNVDFVQGD 77
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 30684743 108 VTspDLKITDGSLDLIFSNWLLMYLSDkeVELLAERMVGWIKVGGYIFF 156
Cdd:COG2227 78 LE--DLPLEDGSFDLVICSEVLEHLPD--PAALLRELARLLKPGGLLLL 122
|
|
| Ubie_methyltran |
pfam01209 |
ubiE/COQ5 methyltransferase family; |
272-426 |
1.36e-11 |
|
ubiE/COQ5 methyltransferase family;
Pssm-ID: 395966 [Multi-domain] Cd Length: 228 Bit Score: 64.38 E-value: 1.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 272 KEFVEK-MNLKPGQKVLDVGCGIGGGDFYMAEKFDV--HVVGIDLSVNMISFALERA--IGLScSVEFEVADCTTKHYPD 346
Cdd:pfam01209 31 KDFTMKcMGVKRGNKFLDVAGGTGDWTFGLSDSAGSsgKVVGLDINENMLKEGEKKAkeEGKY-NIEFLQGNAEELPFED 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 347 NSFDVIYSRDTILHIQDKPALFRTFFKWLKPGGKVLISDYCRsPKTP-----------------------SAEFSEYIKQ 403
Cdd:pfam01209 110 DSFDIVTISFGLRNFPDYLKVLKEAFRVLKPGGRVVCLEFSK-PENPllsqayelyfkyvmpfmgkmfakSYKSYQYLQE 188
|
170 180
....*....|....*....|...
gi 30684743 404 RGYDLHDVQAYGQMLKDAGFTDV 426
Cdd:pfam01209 189 SIRDFPDQKTLASMFEKAGFKSV 211
|
|
| COG4976 |
COG4976 |
Predicted methyltransferase, contains TPR repeat [General function prediction only]; |
44-156 |
1.36e-10 |
|
Predicted methyltransferase, contains TPR repeat [General function prediction only];
Pssm-ID: 444001 [Multi-domain] Cd Length: 181 Bit Score: 60.40 E-value: 1.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 44 EVLSLLPPYEGKSVLELGAGIGRFTGELAQKAGELIALDFIDNVIKKNESiNGHYknVKFMCADVTspDLKITDGSLDLI 123
Cdd:COG4976 37 ELLARLPPGPFGRVLDLGCGTGLLGEALRPRGYRLTGVDLSEEMLAKARE-KGVY--DRLLVADLA--DLAEPDGRFDLI 111
|
90 100 110
....*....|....*....|....*....|...
gi 30684743 124 FSNWLLMYLSDkeVELLAERMVGWIKVGGYIFF 156
Cdd:COG4976 112 VAADVLTYLGD--LAAVFAGVARALKPGGLFIF 142
|
|
| Methyltransf_31 |
pfam13847 |
Methyltransferase domain; This family appears to have methyltransferase activity. |
53-178 |
5.18e-10 |
|
Methyltransferase domain; This family appears to have methyltransferase activity.
Pssm-ID: 463998 [Multi-domain] Cd Length: 150 Bit Score: 57.81 E-value: 5.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 53 EGKSVLELGAGIGRFTGELAQKAG---ELIALDFIDNVIK--KNESINGHYKNVKFMCADVTSPDLKITDGSLDLIFSNW 127
Cdd:pfam13847 3 KGMRVLDLGCGTGHLSFELAEELGpnaEVVGIDISEEAIEkaRENAQKLGFDNVEFEQGDIEELPELLEDDKFDVVISNC 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 30684743 128 LLMYLSDK-EVELLAERMVgwiKVGGYIFFRESCFHQSGDSKRKSNPTHYRE 178
Cdd:pfam13847 83 VLNHIPDPdKVLQEILRVL---KPGGRLIISDPDSLAELPAHVKEDSTYYAG 131
|
|
| BioC |
TIGR02072 |
malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin ... |
46-156 |
1.79e-09 |
|
malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]
Pssm-ID: 273953 [Multi-domain] Cd Length: 240 Bit Score: 58.07 E-value: 1.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 46 LSLLP---PYEGKSVLELGAGIGRFTGELAQK--AGELIALDFIDNVIKKNESINGhyKNVKFMCADVTSpdLKITDGSL 120
Cdd:TIGR02072 24 LALLKekgIFIPASVLDIGCGTGYLTRALLKRfpQAEFIALDISAGMLAQAKTKLS--ENVQFICGDAEK--LPLEDSSF 99
|
90 100 110
....*....|....*....|....*....|....*.
gi 30684743 121 DLIFSNWLLMYLSDKEvELLAErMVGWIKVGGYIFF 156
Cdd:TIGR02072 100 DLIVSNLALQWCDDLS-QALSE-LARVLKPGGLLAF 133
|
|
| PKS_MT |
smart00828 |
Methyltransferase in polyketide synthase (PKS) enzymes; |
285-490 |
3.14e-08 |
|
Methyltransferase in polyketide synthase (PKS) enzymes;
Pssm-ID: 214839 [Multi-domain] Cd Length: 224 Bit Score: 54.34 E-value: 3.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 285 KVLDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALER--AIGLSCSVEFEVADCTTKHYPDNsFDVIYSRDTILHI 361
Cdd:smart00828 2 RVLDFGCGYGSDLIDLAERHpHLQLHGYTISPEQAEVGRERirALGLQGRIRIFYRDSAKDPFPDT-YDLVFGFEVIHHI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 362 QDKPALFRTFFKWLKPGGKVLISDYCRSPKTP-----SAEF----SEYIKQRGYDLHDV-------QAYGQMLKDAGFtd 425
Cdd:smart00828 81 KDKMDLFSNISRHLKDGGHLVLADFIANLLSAieheeTTSYlvtrEEWAELLARNNLRVvegvdasLEIANFLYDPGF-- 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30684743 426 viaedrTDQFMQVLKRELDRVEKEKEKFISDFSKEdyddIVGGWKSklercasdeqkWGLFIANK 490
Cdd:smart00828 159 ------EDNLERLYQDDLDEVTKRHFRGIANLGKL----LEKGLAS-----------YALLIVQK 202
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
57-156 |
3.19e-08 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 51.66 E-value: 3.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 57 VLELGAGIGRFTGELAQ-KAGELIALDFIDNVIKKNESI--NGHYKNVKFMCADVTSPDLKItDGSLDLIFSNWLLMYLS 133
Cdd:cd02440 2 VLDLGCGTGALALALASgPGARVTGVDISPVALELARKAaaALLADNVEVLKGDAEELPPEA-DESFDVIISDPPLHHLV 80
|
90 100
....*....|....*....|...
gi 30684743 134 DKEVELLaERMVGWIKVGGYIFF 156
Cdd:cd02440 81 EDLARFL-EEARRLLKPGGVLVL 102
|
|
| PRK08317 |
PRK08317 |
hypothetical protein; Provisional |
42-154 |
9.28e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 181382 [Multi-domain] Cd Length: 241 Bit Score: 53.02 E-value: 9.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 42 RPEVLSLLPPYEGKSVLELGAGIGRFTGELAQ---KAGELIALDFIDNVIK-KNESINGHYKNVKFMCADVTSpdLKITD 117
Cdd:PRK08317 8 RARTFELLAVQPGDRVLDVGCGPGNDARELARrvgPEGRVVGIDRSEAMLAlAKERAAGLGPNVEFVRGDADG--LPFPD 85
|
90 100 110
....*....|....*....|....*....|....*..
gi 30684743 118 GSLDLIFSNWLLMYLSDKEVeLLAErMVGWIKVGGYI 154
Cdd:PRK08317 86 GSFDAVRSDRVLQHLEDPAR-ALAE-IARVLRPGGRV 120
|
|
| RsmC |
COG2813 |
16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA ... |
257-383 |
1.93e-07 |
|
16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA G1207 methylase RsmC is part of the Pathway/BioSystem: 16S rRNA modification
Pssm-ID: 442062 [Multi-domain] Cd Length: 191 Bit Score: 51.34 E-value: 1.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 257 VFGQGFVSTGgletTKEFVEKMNLKPGQKVLDVGCGIG--GGdfYMAEKF-DVHVVGIDLSvnmiSFALE------RAIG 327
Cdd:COG2813 28 VFSRDRLDIG----TRLLLEHLPEPLGGRVLDLGCGYGviGL--ALAKRNpEARVTLVDVN----ARAVElaranaAANG 97
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30684743 328 LScSVEFEVADCTTkHYPDNSFDVIYS----------RDTILHiqdkpALFRTFFKWLKPGGKVLI 383
Cdd:COG2813 98 LE-NVEVLWSDGLS-GVPDGSFDLILSnppfhagravDKEVAH-----ALIADAARHLRPGGELWL 156
|
|
| SmtA |
COG0500 |
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ... |
35-156 |
7.14e-07 |
|
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];
Pssm-ID: 440266 [Multi-domain] Cd Length: 199 Bit Score: 49.91 E-value: 7.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 35 SDLDKEERPEVLSLLPPYE----GKSVLELGAGIGRFTGELAQKAGE-LIALDF----IDNVIKKNESINghYKNVKFMC 105
Cdd:COG0500 4 SYYSDELLPGLAALLALLErlpkGGRVLDLGCGTGRNLLALAARFGGrVIGIDLspeaIALARARAAKAG--LGNVEFLV 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 30684743 106 ADVTSPDlKITDGSLDLIFSNWLLMYLSDKEVELLAERMVGWIKVGGYIFF 156
Cdd:COG0500 82 ADLAELD-PLPAESFDLVVAFGVLHHLPPEEREALLRELARALKPGGVLLL 131
|
|
| TrmN6 |
COG4123 |
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ... |
279-381 |
9.49e-07 |
|
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 443299 [Multi-domain] Cd Length: 238 Bit Score: 49.76 E-value: 9.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 279 NLKPGQKVLDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALE--RAIGLSCSVEFEVADCTT--KHYPDNSFDVIY 353
Cdd:COG4123 34 PVKKGGRVLDLGTGTGVIALMLAQRSpGARITGVEIQPEAAELARRnvALNGLEDRITVIHGDLKEfaAELPPGSFDLVV 113
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 30684743 354 S-----------------RDTILHIQDKP--ALFRTFFKWLKPGGKV 381
Cdd:COG4123 114 SnppyfkagsgrkspdeaRAIARHEDALTleDLIRAAARLLKPGGRF 160
|
|
| Nnt1 |
COG3897 |
Protein N-terminal and lysine N-methylase, NNT1/EFM7 family [Posttranslational modification, ... |
282-409 |
9.61e-07 |
|
Protein N-terminal and lysine N-methylase, NNT1/EFM7 family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443104 [Multi-domain] Cd Length: 216 Bit Score: 49.50 E-value: 9.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 282 PGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSvnmiSFALErAIGLSC-----SVEFEVADCTTKHyPDNSFDVI---- 352
Cdd:COG3897 70 AGKRVLELGCGLGLVGIAAAKAGAADVTATDYD----PEALA-ALRLNAalngvAITTRLGDWRDPP-AAGGFDLIlggd 143
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 353 --YSRDTILHIqdkPALFRTFfkwLKPGGKVLISDYCRSpktPSAEFSEY-IKQRGYDLH 409
Cdd:COG3897 144 vlYERDLAEPL---LPFLDRL---AAPGGEVLIGDPGRG---YLPAFRERlEALAGYEVV 194
|
|
| PLN02233 |
PLN02233 |
ubiquinone biosynthesis methyltransferase |
281-414 |
2.13e-06 |
|
ubiquinone biosynthesis methyltransferase
Pssm-ID: 177877 [Multi-domain] Cd Length: 261 Bit Score: 49.12 E-value: 2.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 281 KPGQKVLDVGCGIGGGDFYMAEKF--DVHVVGIDLSVNMISFALERAIGLSCS----VEFEVADCTTKHYPDNSFDVIYS 354
Cdd:PLN02233 72 KMGDRVLDLCCGSGDLAFLLSEKVgsDGKVMGLDFSSEQLAVAASRQELKAKScyknIEWIEGDATDLPFDDCYFDAITM 151
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30684743 355 RDTILHIQDKPALFRTFFKWLKPGGKVLISDYCRSPKTPSAEFSEYIKQR-------GYDLHDVQAY 414
Cdd:PLN02233 152 GYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNKSTQPFTTSMQEWMIDNvvvpvatGYGLAKEYEY 218
|
|
| Trm11 |
COG1041 |
tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]; tRNA G10 ... |
280-411 |
2.25e-06 |
|
tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]; tRNA G10 N-methylase Trm11 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440663 [Multi-domain] Cd Length: 172 Bit Score: 47.64 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 280 LKPGQKVLDVGCGIGGgdfyM---AEKFDVHVVGIDLSVNMISFA---LERAigLSCSVEFEVADCTTKHYPDNSFDVI- 352
Cdd:COG1041 24 AKEGDTVLDPFCGTGT----IlieAGLLGRRVIGSDIDPKMVEGArenLEHY--GYEDADVIRGDARDLPLADESVDAIv 97
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30684743 353 ----------YSRDTILHIQDKpaLFRTFFKWLKPGGKVLISdycrspkTPsAEFSEYIKQRGYDLHDV 411
Cdd:COG1041 98 tdppygrsskISGEELLELYEK--ALEEAARVLKPGGRVVIV-------TP-RDIDELLEEAGFKVLER 156
|
|
| UbiG |
TIGR01983 |
ubiquinone biosynthesis O-methyltransferase; This model represents an O-methyltransferase ... |
283-391 |
4.65e-06 |
|
ubiquinone biosynthesis O-methyltransferase; This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273910 Cd Length: 224 Bit Score: 47.67 E-value: 4.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 283 GQKVLDVGCGIGGGDFYMA-EKFDVhvVGIDLSVNMISFALERAIGLSCSVEFEvadCTT--KHYPDN--SFDVIYSRDT 357
Cdd:TIGR01983 47 GLRVLDVGCGGGLLSEPLArLGANV--TGIDASEENIEVAKLHAKKDPLQIDYR---CTTveDLAEKKagSFDVVTCMEV 121
|
90 100 110
....*....|....*....|....*....|....
gi 30684743 358 ILHIQDKPALFRTFFKWLKPGGKVLISDYCRSPK 391
Cdd:TIGR01983 122 LEHVPDPQAFIRACAQLLKPGGILFFSTINRTPK 155
|
|
| TrmR |
COG4122 |
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ... |
280-385 |
4.86e-06 |
|
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 443298 Cd Length: 173 Bit Score: 46.72 E-value: 4.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 280 LKPGQKVLDVGCGIGGGDFYMAE--KFDVHVVGIDLSVNMISFA---LERAiGLSCSVEFEVADCTT--KHYPDNSFDVI 352
Cdd:COG4122 14 LLGAKRILEIGTGTGYSTLWLARalPDDGRLTTIEIDPERAAIArenFARA-GLADRIRLILGDALEvlPRLADGPFDLV 92
|
90 100 110
....*....|....*....|....*....|....*.
gi 30684743 353 YSrDTilhiqDK---PALFRTFFKWLKPGGkVLISD 385
Cdd:COG4122 93 FI-DA-----DKsnyPDYLELALPLLRPGG-LIVAD 121
|
|
| MetW |
pfam07021 |
Methionine biosynthesis protein MetW; This family consists of several bacterial and one ... |
280-358 |
1.03e-05 |
|
Methionine biosynthesis protein MetW; This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalyzed by the products of the metXW genes and is equivalent to the first step in enterobacteria, gram-positive bacteria and fungi, except that in these microorganizms the reaction is catalyzed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in gram-positive bacteria and certain fungi, the second and third steps are a direct sulfhydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells.
Pssm-ID: 399779 Cd Length: 193 Bit Score: 46.29 E-value: 1.03e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30684743 280 LKPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALERAIglscSVEFEVADCTTKHYPDNSFDVIYSRDTI 358
Cdd:pfam07021 11 IPPGSRVLDLGCGDGTLLYLLKEEKGVDGYGIELDAAGVAECVAKGL----YVIQGDLDEGLEHFPDKSFDYVILSQTL 85
|
|
| PRK01683 |
PRK01683 |
trans-aconitate 2-methyltransferase; Provisional |
280-382 |
1.05e-05 |
|
trans-aconitate 2-methyltransferase; Provisional
Pssm-ID: 234970 Cd Length: 258 Bit Score: 46.86 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 280 LKPGQKVLDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALERAIGlscsVEFEVADCTTKHyPDNSFDVIYSRDTI 358
Cdd:PRK01683 29 LENPRYVVDLGCGPGNSTELLVERWpAARITGIDSSPAMLAEARSRLPD----CQFVEADIASWQ-PPQALDLIFANASL 103
|
90 100
....*....|....*....|....
gi 30684743 359 LHIQDKPALFRTFFKWLKPGGkVL 382
Cdd:PRK01683 104 QWLPDHLELFPRLVSLLAPGG-VL 126
|
|
| COG4627 |
COG4627 |
Predicted SAM-depedendent methyltransferase [General function prediction only]; |
344-397 |
1.05e-05 |
|
Predicted SAM-depedendent methyltransferase [General function prediction only];
Pssm-ID: 443666 [Multi-domain] Cd Length: 161 Bit Score: 45.63 E-value: 1.05e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 30684743 344 YPDNSFDVIYSRDTILHIQDK--PALFRTFFKWLKPGGKVLISdycrspkTPSAEF 397
Cdd:COG4627 42 FPDNSVDAIYSSHVLEHLDYEeaPLALKECYRVLKPGGILRIV-------VPDLEH 90
|
|
| PRK06202 |
PRK06202 |
hypothetical protein; Provisional |
286-390 |
1.47e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 180466 [Multi-domain] Cd Length: 232 Bit Score: 46.15 E-value: 1.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 286 VLDVGCGigGGDF-----YMAEK--FDVHVVGIDLSVNMISFALERAIGLSCSVEFEVADCTTKHypDNSFDVIYSrDTI 358
Cdd:PRK06202 64 LLDIGCG--GGDLaidlaRWARRdgLRLEVTAIDPDPRAVAFARANPRRPGVTFRQAVSDELVAE--GERFDVVTS-NHF 138
|
90 100 110
....*....|....*....|....*....|....
gi 30684743 359 LHIQDkPALFRTFFK--WLKPGGKVLISDYCRSP 390
Cdd:PRK06202 139 LHHLD-DAEVVRLLAdsAALARRLVLHNDLIRSR 171
|
|
| COG2263 |
COG2263 |
Predicted RNA methylase [General function prediction only]; |
53-126 |
4.53e-05 |
|
Predicted RNA methylase [General function prediction only];
Pssm-ID: 441864 [Multi-domain] Cd Length: 199 Bit Score: 44.51 E-value: 4.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 53 EGKSVLELGAGIGRFtGELAQKAG--ELIALDfID----NVIKKNESINGHykNVKFMCADVTSPDLkitDGSLDLIFSN 126
Cdd:COG2263 45 EGKTVLDLGCGTGML-AIGAALLGakKVVGVD-IDpealEIARENAERLGV--RVDFIRADVTRIPL---GGSVDTVVMN 117
|
|
| Methyltransf_12 |
pfam08242 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
58-154 |
8.07e-05 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 400515 [Multi-domain] Cd Length: 98 Bit Score: 41.58 E-value: 8.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 58 LELGAGIGRFTGELAQKA--GELIALDFIDNVIKKNESINGHYKNVKFMCADVTSPDLKITDG-SLDLIFSNWLLMYLSD 134
Cdd:pfam08242 1 LEIGCGTGTLLRALLEALpgLEYTGLDISPAALEAARERLAALGLLNAVRVELFQLDLGELDPgSFDVVVASNVLHHLAD 80
|
90 100
....*....|....*....|
gi 30684743 135 KEvELLaERMVGWIKVGGYI 154
Cdd:pfam08242 81 PR-AVL-RNIRRLLKPGGVL 98
|
|
| Cfa |
COG2230 |
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ... |
44-156 |
1.02e-04 |
|
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];
Pssm-ID: 441831 [Multi-domain] Cd Length: 158 Bit Score: 42.61 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 44 EVLSLLPPYEGKSVLELGAGIGRFTGELAQKAG-ELIALDF----IDNVIKKNESINGHYKnVKFMCADVTSPDLkitDG 118
Cdd:COG2230 42 LILRKLGLKPGMRVLDIGCGWGGLALYLARRYGvRVTGVTLspeqLEYARERAAEAGLADR-VEVRLADYRDLPA---DG 117
|
90 100 110
....*....|....*....|....*....|....*...
gi 30684743 119 SLDLIFSNWLLMYLSDKEVELLAERMVGWIKVGGYIFF 156
Cdd:COG2230 118 QFDAIVSIGMFEHVGPENYPAYFAKVARLLKPGGRLLL 155
|
|
| MTS |
pfam05175 |
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit ... |
257-383 |
1.46e-04 |
|
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases.
Pssm-ID: 428349 [Multi-domain] Cd Length: 170 Bit Score: 42.58 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 257 VFGQGFVSTGgletTKEFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALE--RAIGLScSVE 333
Cdd:pfam05175 10 VFSHGRLDIG----SRLLLEHLPKDLSGKVLDLGCGAGVLGAALAKESpDAELTMVDINARALESAREnlAANGLE-NGE 84
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 30684743 334 FEVADCTTKhYPDNSFDVIYS-------RDTILHIQDkpALFRTFFKWLKPGGKVLI 383
Cdd:pfam05175 85 VVASDVYSG-VEDGKFDLIISnppfhagLATTYNVAQ--RFIADAKRHLRPGGELWI 138
|
|
| RsmA |
COG0030 |
16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase ... |
47-146 |
1.92e-04 |
|
16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity) [Translation, ribosomal structure and biogenesis]; 16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity) is part of the Pathway/BioSystem: 16S rRNA modification
Pssm-ID: 439801 [Multi-domain] Cd Length: 270 Bit Score: 43.19 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 47 SLLPPYEGKSVLELGAGIGRFTGELAQKAGELIALDfIDNV-IKKNESINGHYKNVKFMCADVTSPDL-KITDGSLDLIF 124
Cdd:COG0030 31 DAAGITPGDTVLEIGPGLGALTRALLERAARVTAVE-IDRRlAAILRETFAAYPNLTVIEGDALKVDLpALAAGEPLKVV 109
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 30684743 125 SN-----------WLLMYLSD---------KEVellAERMVG 146
Cdd:COG0030 110 GNlpynistpilfKLLEARPPiedavlmvqKEV---AERLVA 148
|
|
| PRK10258 |
PRK10258 |
biotin biosynthesis protein BioC; Provisional |
286-387 |
2.55e-04 |
|
biotin biosynthesis protein BioC; Provisional
Pssm-ID: 182340 [Multi-domain] Cd Length: 251 Bit Score: 42.82 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 286 VLDVGCGIGGGDFYMAEKfDVHVVGIDLSVNMISFALERaiglSCSVEFEVADCTTKHYPDNSFDVIYSRDTILHIQDKP 365
Cdd:PRK10258 46 VLDAGCGPGWMSRYWRER-GSQVTALDLSPPMLAQARQK----DAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLS 120
|
90 100
....*....|....*....|..
gi 30684743 366 ALFRTFFKWLKPGGKVLISDYC 387
Cdd:PRK10258 121 TALRELYRVVRPGGVVAFTTLV 142
|
|
| PrmA |
COG2264 |
Ribosomal protein L11 methylase PrmA [Translation, ribosomal structure and biogenesis]; |
258-384 |
3.27e-04 |
|
Ribosomal protein L11 methylase PrmA [Translation, ribosomal structure and biogenesis];
Pssm-ID: 441865 [Multi-domain] Cd Length: 284 Bit Score: 42.47 E-value: 3.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 258 FGqgfvsTGGLETTK---EFVEKMnLKPGQKVLDVGCG-----IGggdfymAEKF-DVHVVGIDLSvnmiSFALERAI-- 326
Cdd:COG2264 127 FG-----TGTHPTTRlclEALEKL-LKPGKTVLDVGCGsgilaIA------AAKLgAKRVLAVDID----PVAVEAARen 190
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30684743 327 ----GLSCSVEFEVADcttkHYPDNSFDVIYS---RDTILhiqdkpALFRTFFKWLKPGGKVLIS 384
Cdd:COG2264 191 aelnGVEDRIEVVLGD----LLEDGPYDLVVAnilANPLI------ELAPDLAALLKPGGYLILS 245
|
|
| capping_2-OMTase_Flaviviridae |
cd20761 |
Cap-0 specific (nucleoside-2'-O-)-methyltransferase of flaviviridae; Cap-0 specific ... |
245-301 |
7.06e-04 |
|
Cap-0 specific (nucleoside-2'-O-)-methyltransferase of flaviviridae; Cap-0 specific (nucleoside-2'-O-)-methyltransferase (2'OMTase) catalyzes the methylation of Cap-0 (m7GpppNp) at the 2'-hydroxyl of the ribose of the first nucleotide, using S-adenosyl-L-methionine (AdoMet) as the methyl donor. This reaction is the fourth and last step in mRNA capping, the creation of the stabilizing five-prime cap (5' cap) on mRNA. Flaviviridae viruses, comprise a family of ss(+)RNA viruses, cap their mRNAs. The 2'OMTase activity is located in the non-structural protein 5 (NS5).
Pssm-ID: 467736 Cd Length: 225 Bit Score: 41.05 E-value: 7.06e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 30684743 245 QYKSSGILRYERVFGqgFVSTGgleTTK--EFVEKMNLKPGQKVLDVGCGIGGGDFYMA 301
Cdd:cd20761 20 AYKKRGVVEVATKGH--AVSRG---YAKlrWLVERGYVKPSGKVVDLGCGRGGWSQYAA 73
|
|
| TrmA |
COG2265 |
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure ... |
275-352 |
7.86e-04 |
|
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure and biogenesis]; tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 441866 [Multi-domain] Cd Length: 377 Bit Score: 41.70 E-value: 7.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 275 VEKMNLKPGQKVLDVGCGIGGgdF--YMAEKFDvHVVGIDLSVNMISFALE--RAIGLScSVEFEVADCT---TKHYPDN 347
Cdd:COG2265 226 LEWLDLTGGERVLDLYCGVGT--FalPLARRAK-KVIGVEIVPEAVEDAREnaRLNGLK-NVEFVAGDLEevlPELLWGG 301
|
....*
gi 30684743 348 SFDVI 352
Cdd:COG2265 302 RPDVV 306
|
|
| PRK11207 |
PRK11207 |
tellurite resistance methyltransferase TehB; |
43-153 |
9.62e-04 |
|
tellurite resistance methyltransferase TehB;
Pssm-ID: 183040 Cd Length: 197 Bit Score: 40.49 E-value: 9.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 43 PEVLSLLPPYEGKSVLELGAGIGRFTGELAQKAGELIALD----FIDNV--IKKNESINGHYKNVKfmcaDVTSPDLkit 116
Cdd:PRK11207 20 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGFDVTAWDknpmSIANLerIKAAENLDNLHTAVV----DLNNLTF--- 92
|
90 100 110
....*....|....*....|....*....|....*..
gi 30684743 117 DGSLDLIFSNWLLMYLSDKEVELLAERMVGWIKVGGY 153
Cdd:PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGY 129
|
|
| metW |
TIGR02081 |
methionine biosynthesis protein MetW; This protein is found alongside MetX, of the enzyme that ... |
282-358 |
1.02e-03 |
|
methionine biosynthesis protein MetW; This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized. [Amino acid biosynthesis, Aspartate family]
Pssm-ID: 273958 Cd Length: 194 Bit Score: 40.43 E-value: 1.02e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30684743 282 PGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALERAIglscSVEFEVADCTTKHYPDNSFDVIYSRDTI 358
Cdd:TIGR02081 13 PGSRVLDLGCGDGELLALLRDEKQVRGYGIEIDQDGVLACVARGV----NVIQGDLDEGLEAFPDKSFDYVILSQTL 85
|
|
| PRK07580 |
PRK07580 |
Mg-protoporphyrin IX methyl transferase; Validated |
282-338 |
1.41e-03 |
|
Mg-protoporphyrin IX methyl transferase; Validated
Pssm-ID: 236059 [Multi-domain] Cd Length: 230 Bit Score: 40.21 E-value: 1.41e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 30684743 282 PGQKVLDVGCGIGGGDFYMAEKfDVHVVGIDLSVNMISFALERA--IGLSCSVEFEVAD 338
Cdd:PRK07580 63 TGLRILDAGCGVGSLSIPLARR-GAKVVASDISPQMVEEARERApeAGLAGNITFEVGD 120
|
|
| PCMT |
pfam01135 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); |
274-383 |
1.66e-03 |
|
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
Pssm-ID: 395902 [Multi-domain] Cd Length: 205 Bit Score: 39.66 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 274 FVEKMNLKPGQKVLDVGCGIGggdfYMAEKFDVHV--VGIDLSVNMISFALERAI------GLScSVEFEVADcTTKHYP 345
Cdd:pfam01135 65 MLELLELKPGMRVLEIGSGSG----YLTACFARMVgeVGRVVSIEHIPELVEIARrnleklGLE-NVIVVVGD-GRQGWP 138
|
90 100 110
....*....|....*....|....*....|....*....
gi 30684743 346 DNS-FDVIYSRDTIlhiqdkPALFRTFFKWLKPGGKVLI 383
Cdd:pfam01135 139 EFApYDAIHVGAAA------PEIPEALIDQLKEGGRLVI 171
|
|
| COG2263 |
COG2263 |
Predicted RNA methylase [General function prediction only]; |
282-352 |
1.79e-03 |
|
Predicted RNA methylase [General function prediction only];
Pssm-ID: 441864 [Multi-domain] Cd Length: 199 Bit Score: 39.50 E-value: 1.79e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30684743 282 PGQKVLDVGCGIG----GGDFYMAEKfdvhVVGIDLSVNMISFALERAIGLSCSVEFEVADCtTKHYPDNSFDVI 352
Cdd:COG2263 45 EGKTVLDLGCGTGmlaiGAALLGAKK----VVGVDIDPEALEIARENAERLGVRVDFIRADV-TRIPLGGSVDTV 114
|
|
| Nnt1 |
COG3897 |
Protein N-terminal and lysine N-methylase, NNT1/EFM7 family [Posttranslational modification, ... |
41-124 |
2.45e-03 |
|
Protein N-terminal and lysine N-methylase, NNT1/EFM7 family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443104 [Multi-domain] Cd Length: 216 Bit Score: 39.48 E-value: 2.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 41 ERPEVlsllppyEGKSVLELGAGIGrFTGELAQKAG--ELIALDFIDNV---IKKNESINGhyKNVKFMCADVTSPDLki 115
Cdd:COG3897 65 DHPEV-------AGKRVLELGCGLG-LVGIAAAKAGaaDVTATDYDPEAlaaLRLNAALNG--VAITTRLGDWRDPPA-- 132
|
....*....
gi 30684743 116 tDGSLDLIF 124
Cdd:COG3897 133 -AGGFDLIL 140
|
|
| rADc |
smart00650 |
Ribosomal RNA adenine dimethylases; |
44-153 |
3.14e-03 |
|
Ribosomal RNA adenine dimethylases;
Pssm-ID: 128898 Cd Length: 169 Bit Score: 38.65 E-value: 3.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 44 EVLSLLPPYEGKSVLELGAGIGRFTGELAQKAGELIAL----DFIDNVIKKNEsingHYKNVKFMCADVTSPDLkiTDGS 119
Cdd:smart00650 4 KIVRAANLRPGDTVLEIGPGKGALTEELLERAKRVTAIeidpRLAPRLREKFA----AADNLTVIHGDALKFDL--PKLQ 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 30684743 120 LDLIFSN-----------WLL--------MYL-SDKEVellAERMVGWIKVGGY 153
Cdd:smart00650 78 PYKVVGNlpynistpilfKLLeeppafrdAVLmVQKEV---ARRLAAKPGSKDY 128
|
|
| PRK14103 |
PRK14103 |
trans-aconitate 2-methyltransferase; Provisional |
273-379 |
3.17e-03 |
|
trans-aconitate 2-methyltransferase; Provisional
Pssm-ID: 184509 Cd Length: 255 Bit Score: 39.29 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 273 EFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALERAiglscsVEFEVADCTTkHYPDNSFDV 351
Cdd:PRK14103 20 DLLARVGAERARRVVDLGCGPGNLTRYLARRWpGAVIEALDSSPEMVAAARERG------VDARTGDVRD-WKPKPDTDV 92
|
90 100
....*....|....*....|....*...
gi 30684743 352 IYSRDTILHIQDKPALFRTFFKWLKPGG 379
Cdd:PRK14103 93 VVSNAALQWVPEHADLLVRWVDELAPGS 120
|
|
| MTS |
pfam05175 |
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit ... |
46-126 |
5.90e-03 |
|
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases.
Pssm-ID: 428349 [Multi-domain] Cd Length: 170 Bit Score: 37.57 E-value: 5.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 46 LSLLPPYEGKSVLELGAGIGRFTGELAQKAGElIALDFID------NVIKKNESINGHyKNVKFMCADVTSPdlkITDGS 119
Cdd:pfam05175 24 LEHLPKDLSGKVLDLGCGAGVLGAALAKESPD-AELTMVDinaralESARENLAANGL-ENGEVVASDVYSG---VEDGK 98
|
....*..
gi 30684743 120 LDLIFSN 126
Cdd:pfam05175 99 FDLIISN 105
|
|
| PRK13942 |
PRK13942 |
protein-L-isoaspartate O-methyltransferase; Provisional |
276-383 |
6.04e-03 |
|
protein-L-isoaspartate O-methyltransferase; Provisional
Pssm-ID: 184409 Cd Length: 212 Bit Score: 38.07 E-value: 6.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 276 EKMNLKPGQKVLDVGCGIGGGDFYMAEKF--DVHVVGIDLSVNMISFALE--RAIGLScSVEFEVADcTTKHYPDNS-FD 350
Cdd:PRK13942 70 ELLDLKEGMKVLEIGTGSGYHAAVVAEIVgkSGKVVTIERIPELAEKAKKtlKKLGYD-NVEVIVGD-GTLGYEENApYD 147
|
90 100 110
....*....|....*....|....*....|...
gi 30684743 351 VIYSRDTilhiqdKPALFRTFFKWLKPGGKVLI 383
Cdd:PRK13942 148 RIYVTAA------GPDIPKPLIEQLKDGGIMVI 174
|
|
| TrmN6 |
COG4123 |
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ... |
54-126 |
6.33e-03 |
|
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 443299 [Multi-domain] Cd Length: 238 Bit Score: 38.20 E-value: 6.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 54 GKSVLELGAGigrfTGE----LAQK--AGELIALDfIDNV----IKKNESINGHYKNVKFMCADVTSPDLKITDGSLDLI 123
Cdd:COG4123 38 GGRVLDLGTG----TGVialmLAQRspGARITGVE-IQPEaaelARRNVALNGLEDRITVIHGDLKEFAAELPPGSFDLV 112
|
...
gi 30684743 124 FSN 126
Cdd:COG4123 113 VSN 115
|
|
| COG4076 |
COG4076 |
Predicted RNA methylase [General function prediction only]; |
53-145 |
7.24e-03 |
|
Predicted RNA methylase [General function prediction only];
Pssm-ID: 443253 [Multi-domain] Cd Length: 230 Bit Score: 38.09 E-value: 7.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30684743 53 EGKSVLELGAGIGRFTGELAQK-AGELIALD---FIDNVIKKNESINGHYKNVKFMCADVTSPDLKitdGSLDLIFSNWL 128
Cdd:COG4076 35 PGDVVLDIGTGSGLLSMLAARAgAKKVYAVEvnpDIAAVARRIIAANGLSDRITVINADATDLDLP---EKADVIISEML 111
|
90
....*....|....*..
gi 30684743 129 lmylsdkEVELLAERMV 145
Cdd:COG4076 112 -------DTALLDEGQV 121
|
|
| prmA |
PRK00517 |
50S ribosomal protein L11 methyltransferase; |
258-313 |
9.31e-03 |
|
50S ribosomal protein L11 methyltransferase;
Pssm-ID: 234786 [Multi-domain] Cd Length: 250 Bit Score: 37.82 E-value: 9.31e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30684743 258 FGqgfvsTGGLETTK---EFVEKMnLKPGQKVLDVGCG-----IGggdfymAEKFDV-HVVGIDL 313
Cdd:PRK00517 98 FG-----TGTHPTTRlclEALEKL-VLPGKTVLDVGCGsgilaIA------AAKLGAkKVLAVDI 150
|
|
| |
