|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
4-414 |
2.20e-30 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 123.51 E-value: 2.20e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 4 ILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKlsql 83
Cdd:COG4886 32 LLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE---- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 84 paAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLS 163
Cdd:COG4886 108 --ELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLK 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 164 KLDVEGNKLTALsenhiaswtmlaelnacknmlgvlPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLS 243
Cdd:COG4886 186 ELDLSNNQITDL------------------------PEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 244 TLPaEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTA 323
Cdd:COG4886 242 DLP-ELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 324 ALLKYLRSRLSNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTS 403
Cdd:COG4886 321 TTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGV 400
|
410
....*....|.
gi 30683597 404 VSLQTLILSRN 414
Cdd:COG4886 401 LLLTLALLDAV 411
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
66-550 |
1.22e-27 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 118.41 E-value: 1.22e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 66 NLACLVVLNVSHNKLS-QLPAAIGELTAMKSLDVSFNSIS-ELPEQI-GSAISLVKLDCSSNRLK-ELPDSIGRCLDLSD 141
Cdd:PLN00113 67 NSSRVVSIDLSGKNISgKISSAIFRLPYIQTINLSNNQLSgPIPDDIfTTSSSLRYLNLSNNNFTgSIPRGSIPNLETLD 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 142 LkaTNNQIS-SLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELNACKNML-GVLPQNIGSLSRLIRLDLHQNKI 219
Cdd:PLN00113 147 L--SNNMLSgEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLvGQIPRELGQMKSLKWIYLGYNNL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 220 S-SVPPSIGGCSSLVEFYLGINSLS-TLPAEIGDLSRLGTLDLRSNQLK-EYPVGACKL-KLSYLDLSNNSLTGLHPEL- 294
Cdd:PLN00113 225 SgEIPYEIGGLTSLNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLqKLISLDLSDNSLSGEIPELv 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 295 GNMTTLRKLVLVGNPLR-TLRSSLVNGPTAALLKYLRSRLSNseETSASTPTKENVIAsaarMSISSKELSLEglnlsdV 373
Cdd:PLN00113 305 IQLQNLEILHLFSNNFTgKIPVALTSLPRLQVLQLWSNKFSG--EIPKNLGKHNNLTV----LDLSTNNLTGE------I 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 374 PSEVWESGEITKVNLSKNSIE-ELPAQLSTSVSLQTLILSRNKIK-DWPGAILKsLPNLMCLKLDNNPLN--------QI 443
Cdd:PLN00113 373 PEGLCSSGNLFKLILFSNSLEgEIPKSLGACRSLRRVRLQDNSFSgELPSEFTK-LPLVYFLDISNNNLQgrinsrkwDM 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 444 P---------------LDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS-EVPEDILNLSNLIILDLN 507
Cdd:PLN00113 452 PslqmlslarnkffggLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSgEIPDELSSCKKLVSLDLS 531
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 30683597 508 QNSLQ-SIPKGIKNMTSLKHLDISNNNIS-SLPPELGLLEPTLEV 550
Cdd:PLN00113 532 HNQLSgQIPASFSEMPVLSQLDLSQNQLSgEIPKNLGNVESLVQV 576
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
342-583 |
8.08e-15 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 77.81 E-value: 8.08e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 342 STPTKE--NVIASAARMSISSK----ELSLEGLNLSDVPSEVWEsgEITKVNLSKNSIEELPAQLSTSVslQTLILSRNK 415
Cdd:PRK15370 156 EAPAKEaaNREEAVQRMRDCLKnnktELRLKILGLTTIPACIPE--QITTLILDNNELKSLPENLQGNI--KTLYANSNQ 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 416 IKDWPgailKSLPN-LMCLKLDNNPLNQIPLdgfQVVSGLQILDLSVNAVS-------------------FREHPKfcHL 475
Cdd:PRK15370 232 LTSIP----ATLPDtIQEMELSINRITELPE---RLPSALQSLDLFHNKISclpenlpeelrylsvydnsIRTLPA--HL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 476 PQ-LRELYLSRIQLSEVPEDILnlSNLIILDLNQNSLQSIPKGIKnmTSLKHLDISNNNISSLPPElglLEPTLEVLRLD 554
Cdd:PRK15370 303 PSgITHLNVQSNSLTALPETLP--PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQITVLPET---LPPTITTLDVS 375
|
250 260 270
....*....|....*....|....*....|....*
gi 30683597 555 GNPLRSirrpiLERGTKAVLNYLKD------RLPD 583
Cdd:PRK15370 376 RNALTN-----LPENLPAALQIMQAsrnnlvRLPE 405
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
383-563 |
2.11e-14 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 72.51 E-value: 2.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 383 ITKVNLSKNSIEELPAqLSTSVSLQTLILSRNKIKDWPGaiLKSLPNLMCLKLDNNPLNQIplDGFQVVSGLQILDLSVN 462
Cdd:cd21340 4 ITHLYLNDKNITKIDN-LSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKI--ENLENLVNLKKLYLGGN 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 463 AVSFREHpkFCHLPQLRELYLS--RIQLSEV----PEDILNLSN-LIILDLNQNSLQSIpKGIKNMTSLKHLDISNNNIS 535
Cdd:cd21340 79 RISVVEG--LENLTNLEELHIEnqRLPPGEKltfdPRSLAALSNsLRVLNISGNNIDSL-EPLAPLRNLEQLDASNNQIS 155
|
170 180 190
....*....|....*....|....*....|
gi 30683597 536 SLPPELGLLE--PTLEVLRLDGNPLRSIRR 563
Cdd:cd21340 156 DLEELLDLLSswPSLRELDLTGNPVCKKPK 185
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
499-558 |
1.36e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.59 E-value: 1.36e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30683597 499 SNLIILDLNQNSLQSIPKGI-KNMTSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGNPL 558
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
119-310 |
2.35e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.93 E-value: 2.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 119 LDCSSNRLKELPDsIGRCLDLSDLKATNNQISSLpEDMVNCSKLSKLDVEGNKLTALsenhiaswtmlaelnacknmlgv 198
Cdd:cd21340 7 LYLNDKNITKIDN-LSLCKNLKVLYLYDNKITKI-ENLEFLTNLTHLYLQNNQIEKI----------------------- 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 199 lpQNIGSLSRLIRLDLHQNKISSVpPSIGGCSSLVEFYLGINSLST------LPAEIGDLSR-LGTLDLRSNQLKEYPVG 271
Cdd:cd21340 62 --ENLENLVNLKKLYLGGNRISVV-EGLENLTNLEELHIENQRLPPgekltfDPRSLAALSNsLRVLNISGNNIDSLEPL 138
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 30683597 272 ACKLKLSYLDLSNNSLTGLH---PELGNMTTLRKLVLVGNPL 310
Cdd:cd21340 139 APLRNLEQLDASNNQISDLEellDLLSSWPSLRELDLTGNPV 180
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
383-567 |
6.94e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 42.47 E-value: 6.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 383 ITKVNLSKNSI-----EELPAQLSTSVSLQTLILSRNKIKDwPGAI-----LKSLPNLMCLKLDNNPL------------ 440
Cdd:COG5238 182 VETVYLGCNQIgdegiEELAEALTQNTTVTTLWLKRNPIGD-EGAEilaeaLKGNKSLTTLDLSNNQIgdegvialaeal 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 441 -------------NQIPLDG-------FQVVSGLQILDLSVN------AVSFREHPKfcHLPQLRELYLSRIQLSEV--- 491
Cdd:COG5238 261 knnttvetlylsgNQIGAEGaialakaLQGNTTLTSLDLSVNrigdegAIALAEGLQ--GNKTLHTLNLAYNGIGAQgai 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 492 --PEDILNLSNLIILDLNQNSL-----QSIPKGIKNMTSLKHLDISNNNISSLPPEL---GLLEPTLEVLRLDGNPLRSI 561
Cdd:COG5238 339 alAKALQENTTLHSLDLSDNQIgdegaIALAKYLEGNTTLRELNLGKNNIGKQGAEAlidALQTNRLHTLILDGNLIGAE 418
|
....*.
gi 30683597 562 RRPILE 567
Cdd:COG5238 419 AQQRLE 424
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
47-103 |
1.59e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.12 E-value: 1.59e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 30683597 47 LQKLILAHNDIEVLRED-LKNLACLVVLNVSHNKLSQL-PAAIGELTAMKSLDVSFNSI 103
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGaFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
4-414 |
2.20e-30 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 123.51 E-value: 2.20e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 4 ILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKlsql 83
Cdd:COG4886 32 LLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE---- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 84 paAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLS 163
Cdd:COG4886 108 --ELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLK 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 164 KLDVEGNKLTALsenhiaswtmlaelnacknmlgvlPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLS 243
Cdd:COG4886 186 ELDLSNNQITDL------------------------PEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 244 TLPaEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTA 323
Cdd:COG4886 242 DLP-ELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 324 ALLKYLRSRLSNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTS 403
Cdd:COG4886 321 TTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGV 400
|
410
....*....|.
gi 30683597 404 VSLQTLILSRN 414
Cdd:COG4886 401 LLLTLALLDAV 411
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
66-550 |
1.22e-27 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 118.41 E-value: 1.22e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 66 NLACLVVLNVSHNKLS-QLPAAIGELTAMKSLDVSFNSIS-ELPEQI-GSAISLVKLDCSSNRLK-ELPDSIGRCLDLSD 141
Cdd:PLN00113 67 NSSRVVSIDLSGKNISgKISSAIFRLPYIQTINLSNNQLSgPIPDDIfTTSSSLRYLNLSNNNFTgSIPRGSIPNLETLD 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 142 LkaTNNQIS-SLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELNACKNML-GVLPQNIGSLSRLIRLDLHQNKI 219
Cdd:PLN00113 147 L--SNNMLSgEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLvGQIPRELGQMKSLKWIYLGYNNL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 220 S-SVPPSIGGCSSLVEFYLGINSLS-TLPAEIGDLSRLGTLDLRSNQLK-EYPVGACKL-KLSYLDLSNNSLTGLHPEL- 294
Cdd:PLN00113 225 SgEIPYEIGGLTSLNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLqKLISLDLSDNSLSGEIPELv 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 295 GNMTTLRKLVLVGNPLR-TLRSSLVNGPTAALLKYLRSRLSNseETSASTPTKENVIAsaarMSISSKELSLEglnlsdV 373
Cdd:PLN00113 305 IQLQNLEILHLFSNNFTgKIPVALTSLPRLQVLQLWSNKFSG--EIPKNLGKHNNLTV----LDLSTNNLTGE------I 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 374 PSEVWESGEITKVNLSKNSIE-ELPAQLSTSVSLQTLILSRNKIK-DWPGAILKsLPNLMCLKLDNNPLN--------QI 443
Cdd:PLN00113 373 PEGLCSSGNLFKLILFSNSLEgEIPKSLGACRSLRRVRLQDNSFSgELPSEFTK-LPLVYFLDISNNNLQgrinsrkwDM 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 444 P---------------LDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS-EVPEDILNLSNLIILDLN 507
Cdd:PLN00113 452 PslqmlslarnkffggLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSgEIPDELSSCKKLVSLDLS 531
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 30683597 508 QNSLQ-SIPKGIKNMTSLKHLDISNNNIS-SLPPELGLLEPTLEV 550
Cdd:PLN00113 532 HNQLSgQIPASFSEMPVLSQLDLSQNQLSgEIPKNLGNVESLVQV 576
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
70-515 |
6.37e-27 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 116.10 E-value: 6.37e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 70 LVVLNVSHNKLSQlPAAIGELTAMKSLDVSFNSIS-ELPEQIGSAISLVKLDCSSNRLK-ELPDSIGRCLDLSDLKATNN 147
Cdd:PLN00113 120 LRYLNLSNNNFTG-SIPRGSIPNLETLDLSNNMLSgEIPNDIGSFSSLKVLDLGGNVLVgKIPNSLTNLTSLEFLTLASN 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 148 Q-ISSLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELNACKNML-GVLPQNIGSLSRLIRLDLHQNKIS-SVPP 224
Cdd:PLN00113 199 QlVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLtGPIPSSLGNLKNLQYLFLYQNKLSgPIPP 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 225 SIGGCSSLVEFYLGINSLS-------------------------TLPAEIGDLSRLGTLDLRSNQLK-EYPVGACKLK-L 277
Cdd:PLN00113 279 SIFSLQKLISLDLSDNSLSgeipelviqlqnleilhlfsnnftgKIPVALTSLPRLQVLQLWSNKFSgEIPKNLGKHNnL 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 278 SYLDLSNNSLTGLHPE-LGNMTTLRKLVLVGNPLrtlrSSLVNGPTAALLKYLRSRLSNSEeTSASTPTKENVIASAARM 356
Cdd:PLN00113 359 TVLDLSTNNLTGEIPEgLCSSGNLFKLILFSNSL----EGEIPKSLGACRSLRRVRLQDNS-FSGELPSEFTKLPLVYFL 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 357 SISSKELSleglnlSDVPSEVWESGEITKVNLSKNSIE-ELPaQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKL 435
Cdd:PLN00113 434 DISNNNLQ------GRINSRKWDMPSLQMLSLARNKFFgGLP-DSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKL 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 436 DNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS-EVPEDILNLSNLIILDLNQNSLQ-S 513
Cdd:PLN00113 507 SENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSgEIPKNLGNVESLVQVNISHNHLHgS 586
|
..
gi 30683597 514 IP 515
Cdd:PLN00113 587 LP 588
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
63-317 |
2.55e-23 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 102.70 E-value: 2.55e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 63 DLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLDCSSNRLKELPDSIGRclDLSDL 142
Cdd:COG4886 18 LELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLT--DLGDL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 143 KATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENhIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSV 222
Cdd:COG4886 96 TNLTELDLSGNEELSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 223 PPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLK-LSYLDLSNNSLTGLhPELGNMTTLR 301
Cdd:COG4886 175 PEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTnLETLDLSNNQLTDL-PELGNLTNLE 253
|
250
....*....|....*.
gi 30683597 302 KLVLVGNPLRTLRSSL 317
Cdd:COG4886 254 ELDLSNNQLTDLPPLA 269
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
137-579 |
2.48e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 90.76 E-value: 2.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 137 LDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQ 216
Cdd:COG4886 26 LLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSG 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 217 NKissvppSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLK-LSYLDLSNNSLTGLHPELG 295
Cdd:COG4886 106 NE------ELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTnLKSLDLSNNQLTDLPEELG 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 296 NMTTLRKLVLVGNPLRTLRSSLvngptaallkylrSRLSNseetsastptkenviasaarmsisskelsleglnlsdvps 375
Cdd:COG4886 180 NLTNLKELDLSNNQITDLPEPL-------------GNLTN---------------------------------------- 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 376 evwesgeITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGaiLKSLPNLMCLKLDNNPLNQIPLDGFqvVSGLQ 455
Cdd:COG4886 207 -------LEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTDLPPLAN--LTNLK 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 456 ILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNIS 535
Cdd:COG4886 276 TLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLL 355
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 30683597 536 SLPPELGLLEPTLEVLRLDGNPLRSIRRPILERGTKAVLNYLKD 579
Cdd:COG4886 356 LNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAG 399
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
158-583 |
5.33e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.53 E-value: 5.33e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 158 NCSKLSKLDVEGNKLTALSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYL 237
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 238 GINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVgacklKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSL 317
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGNEELSNLT-----NLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 318 VNgptaalLKYLrsrlsnseetsastptkenviasaarmsissKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELP 397
Cdd:COG4886 156 GN------LTNL-------------------------------KSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITDLP 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 398 AQLSTSVSLQTLILSRNKIKDWPGAiLKSLPNLMCLKLDNNPLNQIPldGFQVVSGLQILDLSVNAVSfrEHPKFCHLPQ 477
Cdd:COG4886 199 EPLGNLTNLEELDLSGNQLTDLPEP-LANLTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLT--DLPPLANLTN 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 478 LRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGNP 557
Cdd:COG4886 274 LKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353
|
410 420
....*....|....*....|....*.
gi 30683597 558 LRSIRRPILERGTKAVLNYLKDRLPD 583
Cdd:COG4886 354 LLLNLLSLLLTLLLTLGLLGLLEATL 379
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
50-269 |
8.22e-18 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 87.44 E-value: 8.22e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 50 LILAHNDIEVLREDLKnlACLVVLNVSHNKLSQLPAAIGEltAMKSLDVSFNSISELPEQIGSAisLVKLDCSSNRLKEL 129
Cdd:PRK15370 204 LILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPATLPD--TIQEMELSINRITELPERLPSA--LQSLDLFHNKISCL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 130 PDSIGRclDLSDLKATNNQISSLPEDMVncSKLSKLDVEGNKLTALSENHIASwtmLAELNACKNMLGVLPQNIGslSRL 209
Cdd:PRK15370 278 PENLPE--ELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLTALPETLPPG---LKTLEAGENALTSLPASLP--PEL 348
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 210 IRLDLHQNKISSVPPSIGgcSSLVEFYLGINSLSTLPAEIGdlSRLGTLDLRSNQLKEYP 269
Cdd:PRK15370 349 QVLDVSKNQITVLPETLP--PTITTLDVSRNALTNLPENLP--AALQIMQASRNNLVRLP 404
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
342-583 |
8.08e-15 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 77.81 E-value: 8.08e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 342 STPTKE--NVIASAARMSISSK----ELSLEGLNLSDVPSEVWEsgEITKVNLSKNSIEELPAQLSTSVslQTLILSRNK 415
Cdd:PRK15370 156 EAPAKEaaNREEAVQRMRDCLKnnktELRLKILGLTTIPACIPE--QITTLILDNNELKSLPENLQGNI--KTLYANSNQ 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 416 IKDWPgailKSLPN-LMCLKLDNNPLNQIPLdgfQVVSGLQILDLSVNAVS-------------------FREHPKfcHL 475
Cdd:PRK15370 232 LTSIP----ATLPDtIQEMELSINRITELPE---RLPSALQSLDLFHNKISclpenlpeelrylsvydnsIRTLPA--HL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 476 PQ-LRELYLSRIQLSEVPEDILnlSNLIILDLNQNSLQSIPKGIKnmTSLKHLDISNNNISSLPPElglLEPTLEVLRLD 554
Cdd:PRK15370 303 PSgITHLNVQSNSLTALPETLP--PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQITVLPET---LPPTITTLDVS 375
|
250 260 270
....*....|....*....|....*....|....*
gi 30683597 555 GNPLRSirrpiLERGTKAVLNYLKD------RLPD 583
Cdd:PRK15370 376 RNALTN-----LPENLPAALQIMQAsrnnlvRLPE 405
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
383-563 |
2.11e-14 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 72.51 E-value: 2.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 383 ITKVNLSKNSIEELPAqLSTSVSLQTLILSRNKIKDWPGaiLKSLPNLMCLKLDNNPLNQIplDGFQVVSGLQILDLSVN 462
Cdd:cd21340 4 ITHLYLNDKNITKIDN-LSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKI--ENLENLVNLKKLYLGGN 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 463 AVSFREHpkFCHLPQLRELYLS--RIQLSEV----PEDILNLSN-LIILDLNQNSLQSIpKGIKNMTSLKHLDISNNNIS 535
Cdd:cd21340 79 RISVVEG--LENLTNLEELHIEnqRLPPGEKltfdPRSLAALSNsLRVLNISGNNIDSL-EPLAPLRNLEQLDASNNQIS 155
|
170 180 190
....*....|....*....|....*....|
gi 30683597 536 SLPPELGLLE--PTLEVLRLDGNPLRSIRR 563
Cdd:cd21340 156 DLEELLDLLSswPSLRELDLTGNPVCKKPK 185
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
47-206 |
7.16e-13 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 71.65 E-value: 7.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 47 LQKLILAHNDIEVLREDLKNlaCLVVLNVSHNKLSQLPAAIGelTAMKSLDVSFNSISELPEQIgsAISLVKLDCSSNRL 126
Cdd:PRK15370 264 LQSLDLFHNKISCLPENLPE--ELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLTALPETL--PPGLKTLEAGENAL 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 127 KELPDSIGRclDLSDLKATNNQISSLPEDMVncSKLSKLDVEGNKLTALSENHIASwtmLAELNACKNMLGVLPQNIGSL 206
Cdd:PRK15370 338 TSLPASLPP--ELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTNLPENLPAA---LQIMQASRNNLVRLPESLPHF 410
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
60-241 |
3.71e-11 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 66.02 E-value: 3.71e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 60 LREDLKNLACLVVLNVSHNKLS-QLPAAIGELTAMKSLDVSFNSIS-ELPEQIGSAiSLVKLDCSSNRLKE-LPDSIGRC 136
Cdd:PLN00113 420 LPSEFTKLPLVYFLDISNNNLQgRINSRKWDMPSLQMLSLARNKFFgGLPDSFGSK-RLENLDLSRNQFSGaVPRKLGSL 498
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 137 LDLSDLKATNNQISS-LPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELNACKNML-GVLPQNIGSLSRLIRLDL 214
Cdd:PLN00113 499 SELMQLKLSENKLSGeIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLsGEIPKNLGNVESLVQVNI 578
|
170 180
....*....|....*....|....*..
gi 30683597 215 HQNKISSVPPSIGGcsslvefYLGINS 241
Cdd:PLN00113 579 SHNHLHGSLPSTGA-------FLAINA 598
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
358-558 |
9.26e-08 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 55.24 E-value: 9.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 358 ISSKELSleGLNLS-DVPSEVWESGEITKVNLSKNSIE-ELPAQLS-TSVSLQTLILSRNkikDWPGAILK-SLPNLMCL 433
Cdd:PLN00113 71 VVSIDLS--GKNISgKISSAIFRLPYIQTINLSNNQLSgPIPDDIFtTSSSLRYLNLSNN---NFTGSIPRgSIPNLETL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 434 KLDNNPLN-QIPLDgFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS----------------------- 489
Cdd:PLN00113 146 DLSNNMLSgEIPND-IGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVgqiprelgqmkslkwiylgynnl 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 490 --------------------------EVPEDILNLSNLIILDLNQNSLQ-SIPKGIKNMTSLKHLDISNNNISSLPPELG 542
Cdd:PLN00113 225 sgeipyeiggltslnhldlvynnltgPIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLQKLISLDLSDNSLSGEIPELV 304
|
250
....*....|....*.
gi 30683597 543 LLEPTLEVLRLDGNPL 558
Cdd:PLN00113 305 IQLQNLEILHLFSNNF 320
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
70-370 |
2.47e-07 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 53.63 E-value: 2.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 70 LVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEqigsaiSLVKLDCSSNRLKELPdsiGRCLDLSDLKATNNQI 149
Cdd:PRK15387 264 LLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPP------GLQELSVSDNQLASLP---ALPSELCKLWAYNNQL 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 150 SSLPEDMVNCSKLSkldvegnkltaLSENHIASwtmlaelnacknmLGVLPqnigslSRLIRLDLHQNKISSVPPSIGGC 229
Cdd:PRK15387 335 TSLPTLPSGLQELS-----------VSDNQLAS-------------LPTLP------SELYKLWAYNNRLTSLPALPSGL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 230 SSLVEFYLGINSLSTLPAEIGDLSRLGTldlRSNQLKEYPVGacklkLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNP 309
Cdd:PRK15387 385 KELIVSGNRLTSLPVLPSELKELMVSGN---RLTSLPMLPSG-----LLSLSVYRNQLTRLPESLIHLSSETTVNLEGNP 456
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30683597 310 L--RTLRS----SLVNGPTAALLKYLRSRLSNSEETSA--------STPTKENVIASAARMSISSKELSLEGLNL 370
Cdd:PRK15387 457 LseRTLQAlreiTSAPGYSGPIIRFDMAGASAPRETRAlhlaaadwLVPAREGEPAPADRWHMFGQEDNADAFSL 531
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
499-558 |
1.36e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.59 E-value: 1.36e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30683597 499 SNLIILDLNQNSLQSIPKGI-KNMTSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGNPL 558
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
476-534 |
6.66e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 43.67 E-value: 6.66e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30683597 476 PQLRELYLSRIQLSEVPEDIL-NLSNLIILDLNQNSLQSI-PKGIKNMTSLKHLDISNNNI 534
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFkGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
491-558 |
1.37e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 47.89 E-value: 1.37e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 491 VPEDILNLSNLIILDLNQNSLQ-SIPKGIKNMTSLKHLDISNNNIS-SLPPELGLLEpTLEVLRLDGNPL 558
Cdd:PLN03150 434 IPNDISKLRHLQSINLSGNSIRgNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLT-SLRILNLNGNSL 502
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
14-115 |
1.47e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 48.15 E-value: 1.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 14 LNLSNRSLKDVPTEVYQCLETTGEGENWWEAV------DLQKLILAHNDIEVLREDLKnlACLVVLNVSHNKLSQLPAAI 87
Cdd:PRK15370 309 LNVQSNSLTALPETLPPGLKTLEAGENALTSLpaslppELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTNLPENL 386
|
90 100
....*....|....*....|....*...
gi 30683597 88 GelTAMKSLDVSFNSISELPEQIGSAIS 115
Cdd:PRK15370 387 P--AALQIMQASRNNLVRLPESLPHFRG 412
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
59-147 |
1.71e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 47.89 E-value: 1.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 59 VLREDLKNLACLVVLNVSHNKL-SQLPAAIGELTAMKSLDVSFNSIS-ELPEQIGSAISLVKLDCSSNRLK-ELPDSIG- 134
Cdd:PLN03150 433 FIPNDISKLRHLQSINLSGNSIrGNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLSgRVPAALGg 512
|
90
....*....|...
gi 30683597 135 RCLDLSDLKATNN 147
Cdd:PLN03150 513 RLLHRASFNFTDN 525
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
197-292 |
2.05e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 47.50 E-value: 2.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 197 GVLPQNIGSLSRLIRLDLHQNKI-SSVPPSIGGCSSLVEFYLGINSLS-TLPAEIGDLSRLGTLDLRSNQLK-EYP--VG 271
Cdd:PLN03150 432 GFIPNDISKLRHLQSINLSGNSIrGNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLSgRVPaaLG 511
|
90 100
....*....|....*....|....*
gi 30683597 272 ACKLKLSYLDLSNNS----LTGLHP 292
Cdd:PLN03150 512 GRLLHRASFNFTDNAglcgIPGLRA 536
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
46-126 |
2.27e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 47.54 E-value: 2.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 46 DLQKLILAHNDIE-VLREDLKNLACLVVLNVSHNKLS-QLPAAIGELTAMKSLDVSFNSIS-ELPEQIGSAISLVKLDCS 122
Cdd:PLN00113 500 ELMQLKLSENKLSgEIPDELSSCKKLVSLDLSHNQLSgQIPASFSEMPVLSQLDLSQNQLSgEIPKNLGNVESLVQVNIS 579
|
....
gi 30683597 123 SNRL 126
Cdd:PLN00113 580 HNHL 583
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
119-310 |
2.35e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.93 E-value: 2.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 119 LDCSSNRLKELPDsIGRCLDLSDLKATNNQISSLpEDMVNCSKLSKLDVEGNKLTALsenhiaswtmlaelnacknmlgv 198
Cdd:cd21340 7 LYLNDKNITKIDN-LSLCKNLKVLYLYDNKITKI-ENLEFLTNLTHLYLQNNQIEKI----------------------- 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 199 lpQNIGSLSRLIRLDLHQNKISSVpPSIGGCSSLVEFYLGINSLST------LPAEIGDLSR-LGTLDLRSNQLKEYPVG 271
Cdd:cd21340 62 --ENLENLVNLKKLYLGGNRISVV-EGLENLTNLEELHIENQRLPPgekltfDPRSLAALSNsLRVLNISGNNIDSLEPL 138
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 30683597 272 ACKLKLSYLDLSNNSLTGLH---PELGNMTTLRKLVLVGNPL 310
Cdd:cd21340 139 APLRNLEQLDASNNQISDLEellDLLSSWPSLRELDLTGNPV 180
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
452-558 |
2.35e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 47.54 E-value: 2.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 452 SGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS-EVPEDILNLS-NLIILDLNQNSLQ-SIPKGikNMTSLKHLD 528
Cdd:PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSgPIPDDIFTTSsSLRYLNLSNNNFTgSIPRG--SIPNLETLD 146
|
90 100 110
....*....|....*....|....*....|.
gi 30683597 529 ISNNNIS-SLPPELGLLEpTLEVLRLDGNPL 558
Cdd:PLN00113 147 LSNNMLSgEIPNDIGSFS-SLKVLDLGGNVL 176
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
47-190 |
7.76e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 44.39 E-value: 7.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 47 LQKLILAHNDIEVLrEDLKNLACLVVLNVSHNKLSQLpAAIGELTAMKSLDVSfNSISELPEQI--------GSAISLVK 118
Cdd:cd21340 48 LTHLYLQNNQIEKI-ENLENLVNLKKLYLGGNRISVV-EGLENLTNLEELHIE-NQRLPPGEKLtfdprslaALSNSLRV 124
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30683597 119 LDCSSNRLKELPDSigRCLD-LSDLKATNNQISSLPE--DMV-NCSKLSKLDVEGNKLTALS---ENHIASWTMLAELN 190
Cdd:cd21340 125 LNISGNNIDSLEPL--APLRnLEQLDASNNQISDLEEllDLLsSWPSLRELDLTGNPVCKKPkyrDKIILASKSLEVLD 201
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
245-310 |
1.84e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 44.42 E-value: 1.84e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30683597 245 LPAEIGDLSRLGTLDLRSNQLK-EYPVGACKLK-LSYLDLSNNSLTGLHPE-LGNMTTLRKLVLVGNPL 310
Cdd:PLN03150 434 IPNDISKLRHLQSINLSGNSIRgNIPPSLGSITsLEVLDLSYNSFNGSIPEsLGQLTSLRILNLNGNSL 502
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
339-538 |
2.72e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 44.00 E-value: 2.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 339 TSASTPTKENVIASAARMSISSKELSLEG---------LNLSDVPSEVWESG----------EITKVNLSKNSIEELPAq 399
Cdd:PRK15387 161 TAPQTPAEYDAVWSAWRRAAPAEESRGRAavvqkmracLNNGNAVLNVGESGlttlpdclpaHITTLVIPDNNLTSLPA- 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 400 lsTSVSLQTLILSRNKIKDWPgaILKslPNLMCLKLDNNPLNQIPldgfQVVSGLQILDLSVNAV-SFREHPkfchlPQL 478
Cdd:PRK15387 240 --LPPELRTLEVSGNQLTSLP--VLP--PGLLELSIFSNPLTHLP----ALPSGLCKLWIFGNQLtSLPVLP-----PGL 304
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 479 RELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGiknmtsLKHLDISNNNISSLP 538
Cdd:PRK15387 305 QELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTLPSG------LQELSVSDNQLASLP 358
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
352-556 |
3.77e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 42.73 E-value: 3.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 352 SAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQ----LSTSVSLQTLILSRNKIKDWPGAIL-KS 426
Cdd:cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGvlesLLRSSSLQELKLNNNGLGDRGLRLLaKG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 427 LPNLMC----LKLDNNPLNQIPLDG----FQVVSGLQILDLSVNAVSFREHPKFCHlpqlrelylsriqlsevpeDILNL 498
Cdd:cd00116 132 LKDLPPalekLVLGRNRLEGASCEAlakaLRANRDLKELNLANNGIGDAGIRALAE-------------------GLKAN 192
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30683597 499 SNLIILDLNQNSL-----QSIPKGIKNMTSLKHLDISNNNISS-----LPPELGLLEPTLEVLRLDGN 556
Cdd:cd00116 193 CNLEVLDLNNNGLtdegaSALAETLASLKSLEVLNLGDNNLTDagaaaLASALLSPNISLLTLSLSCN 260
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
165-250 |
4.21e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 43.27 E-value: 4.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 165 LDVEGnkLTALSENHIASWTMLAELNACKNML-GVLPQNIGSLSRLIRLDLHQNKIS-SVPPSIGGCSSLVEFYLGINSL 242
Cdd:PLN03150 425 LDNQG--LRGFIPNDISKLRHLQSINLSGNSIrGNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSL 502
|
....*....
gi 30683597 243 S-TLPAEIG 250
Cdd:PLN03150 503 SgRVPAALG 511
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
365-480 |
4.88e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 42.88 E-value: 4.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 365 LEGLNLSD------VPSEVWESGEITKVNLSKNSIE-ELPAQLSTSVSLQTLILSRNKIKdwpGAILKSLPNLMCLKLDN 437
Cdd:PLN03150 420 IDGLGLDNqglrgfIPNDISKLRHLQSINLSGNSIRgNIPPSLGSITSLEVLDLSYNSFN---GSIPESLGQLTSLRILN 496
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 30683597 438 npLNQIPLDGfQVVSGLQILDLSVNAVSFREHPKFCHLPQLRE 480
Cdd:PLN03150 497 --LNGNSLSG-RVPAALGGRLLHRASFNFTDNAGLCGIPGLRA 536
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
383-567 |
6.94e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 42.47 E-value: 6.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 383 ITKVNLSKNSI-----EELPAQLSTSVSLQTLILSRNKIKDwPGAI-----LKSLPNLMCLKLDNNPL------------ 440
Cdd:COG5238 182 VETVYLGCNQIgdegiEELAEALTQNTTVTTLWLKRNPIGD-EGAEilaeaLKGNKSLTTLDLSNNQIgdegvialaeal 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 441 -------------NQIPLDG-------FQVVSGLQILDLSVN------AVSFREHPKfcHLPQLRELYLSRIQLSEV--- 491
Cdd:COG5238 261 knnttvetlylsgNQIGAEGaialakaLQGNTTLTSLDLSVNrigdegAIALAEGLQ--GNKTLHTLNLAYNGIGAQgai 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 492 --PEDILNLSNLIILDLNQNSL-----QSIPKGIKNMTSLKHLDISNNNISSLPPEL---GLLEPTLEVLRLDGNPLRSI 561
Cdd:COG5238 339 alAKALQENTTLHSLDLSDNQIgdegaIALAKYLEGNTTLRELNLGKNNIGKQGAEAlidALQTNRLHTLILDGNLIGAE 418
|
....*.
gi 30683597 562 RRPILE 567
Cdd:COG5238 419 AQQRLE 424
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
475-542 |
9.38e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 42.11 E-value: 9.38e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30683597 475 LPQLRelYLSRIQLS------EVPEDILNLSNLIILDLNQNSLQ-SIPKGIKNMTSLKHLDISNNNISS-LPPELG 542
Cdd:PLN03150 438 ISKLR--HLQSINLSgnsirgNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLSGrVPAALG 511
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
428-485 |
9.81e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.50 E-value: 9.81e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 30683597 428 PNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSR 485
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSG 58
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
405-462 |
1.21e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.50 E-value: 1.21e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 30683597 405 SLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVN 462
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
47-103 |
1.59e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.12 E-value: 1.59e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 30683597 47 LQKLILAHNDIEVLRED-LKNLACLVVLNVSHNKLSQL-PAAIGELTAMKSLDVSFNSI 103
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGaFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
253-310 |
2.05e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 36.73 E-value: 2.05e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30683597 253 SRLGTLDLRSNQLKEYPVGACK--LKLSYLDLSNNSLTGLHPE-LGNMTTLRKLVLVGNPL 310
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKglSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
47-129 |
4.41e-03 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 39.77 E-value: 4.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 47 LQKLILAHNDI-----EVLREDLKNLACLVVLNVSHNKLSQ-----LPAAIGELTAMKSLDVSFNSIS-----ELPEQIG 111
Cdd:COG5238 294 LTSLDLSVNRIgdegaIALAEGLQGNKTLHTLNLAYNGIGAqgaiaLAKALQENTTLHSLDLSDNQIGdegaiALAKYLE 373
|
90
....*....|....*...
gi 30683597 112 SAISLVKLDCSSNRLKEL 129
Cdd:COG5238 374 GNTTLRELNLGKNNIGKQ 391
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
186-531 |
4.94e-03 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 39.86 E-value: 4.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 186 LAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLG-INSLSTLPAEIGDLSRLGTLDL-RSN 263
Cdd:PLN03210 613 LVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSdCSSLVELPSSIQYLNKLEDLDMsRCE 692
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 264 QLKEYPVGACKLKLSYLDLSNNSLTGLHPELGnmTTLRKLVLVGNPLRTLRSSLvngptaallkylrsRLSNSEETS--- 340
Cdd:PLN03210 693 NLEILPTGINLKSLYRLNLSGCSRLKSFPDIS--TNISWLDLDETAIEEFPSNL--------------RLENLDELIlce 756
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 341 -ASTPTKENVIASAARMSISSKelSLEGLNLSDVPSEVwesgeitkvnlsknsieELPAQLSTSVSLQTLILSRNKIkdw 419
Cdd:PLN03210 757 mKSEKLWERVQPLTPLMTMLSP--SLTRLFLSDIPSLV-----------------ELPSSIQNLHKLEHLEIENCIN--- 814
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 420 pgaiLKSLPNLMCLKLdnnpLNQIPLDGfqvVSGLQIL-DLSVNavsfrehpkfchlpqLRELYLSRIQLSEVPEDILNL 498
Cdd:PLN03210 815 ----LETLPTGINLES----LESLDLSG---CSRLRTFpDISTN---------------ISDLNLSRTGIEEVPWWIEKF 868
|
330 340 350
....*....|....*....|....*....|....
gi 30683597 499 SNLIILDLNQ-NSLQSIPKGIKNMTSLKHLDISN 531
Cdd:PLN03210 869 SNLSFLDMNGcNNLQRVSLNISKLKHLETVDFSD 902
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
207-265 |
5.83e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 5.83e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30683597 207 SRLIRLDLHQNKISSVPPSI-GGCSSLVEFYLGINSLSTL-PAEIGDLSRLGTLDLRSNQL 265
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
388-528 |
7.75e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 38.23 E-value: 7.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30683597 388 LSKNSIEELPaQLSTSVSLQTLILSRNKIKDWPGaiLKSLPNLMCLKLDNNPL---NQIPLDGFQVVS---GLQILDLSV 461
Cdd:cd21340 53 LQNNQIEKIE-NLENLVNLKKLYLGGNRISVVEG--LENLTNLEELHIENQRLppgEKLTFDPRSLAAlsnSLRVLNISG 129
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30683597 462 NAVSFREhpKFCHLPQLRELYLSRIQLS---EVPEDILNLSNLIILDLNQNSLQSIPK----GIKNMTSLKHLD 528
Cdd:cd21340 130 NNIDSLE--PLAPLRNLEQLDASNNQISdleELLDLLSSWPSLRELDLTGNPVCKKPKyrdkIILASKSLEVLD 201
|
|
| |
