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Conserved domains on  [gi|15224360|ref|NP_181908|]
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Actin-binding FH2 (formin homology 2) family protein [Arabidopsis thaliana]

Protein Classification

FH2 domain-containing protein( domain architecture ID 10490182)

FH2 domain-containing protein similar to formin homology proteins that control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarization

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
438-839 1.42e-139

Formin Homology 2 Domain;


:

Pssm-ID: 396655  Cd Length: 372  Bit Score: 419.75  E-value: 1.42e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   438 EKKVETMKPKLKTLHWDKVRASSSRVMVWDQIKSNSFQVNEEM--IETLFKVNDPTSR----TRDGVVQSVSQENRFLDP 511
Cdd:pfam02181   1 PKKTPKPKKKLKPLHWDKVRPSQDRGTVWDKLDDESFELDGDLseLEELFSAKAKTKKnkksEDKSSSKKKPKEVSLLDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   512 RKSHNIAILLRALNVTADEVCEALIEGNSDTLGPELLECLLKMAPTKEEEDKLKELKDDddgsPSKIGPAEKFLKALLNI 591
Cdd:pfam02181  81 KRAQNIAILLRKLKLPPEEIIQAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGD----PSELGRAEQFLLELSKI 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   592 PFAFKRIDAMLYIVKFESEIEYLNRSFDTLEAATGELKNTRMFLKLLEAVLKTGNRMNIGTNRGDAHAFKLDTLLKLVDI 671
Cdd:pfam02181 157 PRLEARLRALLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDT 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   672 KGADGKTTLLHFVVQEIIKfegarvpftpsqshigdnmaeqsafqddlelkklGLQVVSGLSSQLINVKKAAAMDSNSLI 751
Cdd:pfam02181 237 KSTDNKTTLLHYLVKIIRE----------------------------------KFPEVLDFSSELSHVKKAAKVNLEQLE 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   752 NETAEIARGIAKVKEVITELKQETGVE-RFLESMNSFLNKGEKEITELQSHGDNVMKMVKEVTEYF-HGNSETHPFRIFA 829
Cdd:pfam02181 283 KDVKQLERGLKKLERELELSALDEHPDdKFREVLKEFLKSAEEKLDKLESLLREALELFKELVEYFgEDPKETSPEEFFK 362
                         410
                  ....*....|
gi 15224360   830 VVRDFLTILD 839
Cdd:pfam02181 363 ILRDFLKEFK 372
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
438-839 1.42e-139

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 419.75  E-value: 1.42e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   438 EKKVETMKPKLKTLHWDKVRASSSRVMVWDQIKSNSFQVNEEM--IETLFKVNDPTSR----TRDGVVQSVSQENRFLDP 511
Cdd:pfam02181   1 PKKTPKPKKKLKPLHWDKVRPSQDRGTVWDKLDDESFELDGDLseLEELFSAKAKTKKnkksEDKSSSKKKPKEVSLLDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   512 RKSHNIAILLRALNVTADEVCEALIEGNSDTLGPELLECLLKMAPTKEEEDKLKELKDDddgsPSKIGPAEKFLKALLNI 591
Cdd:pfam02181  81 KRAQNIAILLRKLKLPPEEIIQAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGD----PSELGRAEQFLLELSKI 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   592 PFAFKRIDAMLYIVKFESEIEYLNRSFDTLEAATGELKNTRMFLKLLEAVLKTGNRMNIGTNRGDAHAFKLDTLLKLVDI 671
Cdd:pfam02181 157 PRLEARLRALLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDT 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   672 KGADGKTTLLHFVVQEIIKfegarvpftpsqshigdnmaeqsafqddlelkklGLQVVSGLSSQLINVKKAAAMDSNSLI 751
Cdd:pfam02181 237 KSTDNKTTLLHYLVKIIRE----------------------------------KFPEVLDFSSELSHVKKAAKVNLEQLE 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   752 NETAEIARGIAKVKEVITELKQETGVE-RFLESMNSFLNKGEKEITELQSHGDNVMKMVKEVTEYF-HGNSETHPFRIFA 829
Cdd:pfam02181 283 KDVKQLERGLKKLERELELSALDEHPDdKFREVLKEFLKSAEEKLDKLESLLREALELFKELVEYFgEDPKETSPEEFFK 362
                         410
                  ....*....|
gi 15224360   830 VVRDFLTILD 839
Cdd:pfam02181 363 ILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
439-846 1.47e-133

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 404.81  E-value: 1.47e-133
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    439 KKVETMKPKLKTLHWDKVRASSSRVMVWDQIKSNSfQVNEEMIETLFKVNDPT-------SRTRDGVVQSVSQENRFLDP 511
Cdd:smart00498   1 KKEPKPKKKLKPLHWDKLNPSDLSGTVWDKIDEES-EGDLDELEELFSAKEKTksaskdvSEKKSILKKKASQEFKILDP 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    512 RKSHNIAILLRALNVTADEVCEALIEGNSDTLGPELLECLLKMAPTKEEEDKLKELKDDDdgsPSKIGPAEKFLKALLNI 591
Cdd:smart00498  80 KRSQNLAILLRKLHMSYEEIKEAILEGDEDVLSVDLLEQLLKYAPTKEELKKLREYKEED---PEELARAEQFLLLISNI 156
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    592 PFAFKRIDAMLYIVKFESEIEYLNRSFDTLEAATGELKNTRMFLKLLEAVLKTGNRMNIGTNRGDAHAFKLDTLLKLVDI 671
Cdd:smart00498 157 PYLEERLNALLFKANFEEEVEDLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDV 236
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    672 KGADGKTTLLHFVVQEIIKFEgarvpftpsqshigdnmaeqsafqddlelkKLGLQVVSGLSSQLINV----KKAAAMDS 747
Cdd:smart00498 237 KSADNKTTLLHFLVKIIRKKY------------------------------LGGLSDPENLDDKFIEVmkpfLKAAKEKY 286
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    748 NSLINETAEIARGIAKVKEVITELKQETGVE----RFLESMNSFLNKGEKEITELQSHGDNVMKMVKEVTEYFHGNS--- 820
Cdd:smart00498 287 DKLQKDLSDLKTRFEKLVEYYGEDPKDTSPEeffkDFNEFLKEFSKAAEENIKKEEEEEERRKKLVKETTEYEQSSSrqk 366
                          410       420
                   ....*....|....*....|....*.
gi 15224360    821 ETHPFRIFAVVRDFLTILDQVCKEVG 846
Cdd:smart00498 367 ERNPSMDFEVERDFLGVLDSLLEELG 392
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
438-839 1.42e-139

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 419.75  E-value: 1.42e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   438 EKKVETMKPKLKTLHWDKVRASSSRVMVWDQIKSNSFQVNEEM--IETLFKVNDPTSR----TRDGVVQSVSQENRFLDP 511
Cdd:pfam02181   1 PKKTPKPKKKLKPLHWDKVRPSQDRGTVWDKLDDESFELDGDLseLEELFSAKAKTKKnkksEDKSSSKKKPKEVSLLDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   512 RKSHNIAILLRALNVTADEVCEALIEGNSDTLGPELLECLLKMAPTKEEEDKLKELKDDddgsPSKIGPAEKFLKALLNI 591
Cdd:pfam02181  81 KRAQNIAILLRKLKLPPEEIIQAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGD----PSELGRAEQFLLELSKI 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   592 PFAFKRIDAMLYIVKFESEIEYLNRSFDTLEAATGELKNTRMFLKLLEAVLKTGNRMNIGTNRGDAHAFKLDTLLKLVDI 671
Cdd:pfam02181 157 PRLEARLRALLFKSTFEEEIEELKPSLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDT 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   672 KGADGKTTLLHFVVQEIIKfegarvpftpsqshigdnmaeqsafqddlelkklGLQVVSGLSSQLINVKKAAAMDSNSLI 751
Cdd:pfam02181 237 KSTDNKTTLLHYLVKIIRE----------------------------------KFPEVLDFSSELSHVKKAAKVNLEQLE 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360   752 NETAEIARGIAKVKEVITELKQETGVE-RFLESMNSFLNKGEKEITELQSHGDNVMKMVKEVTEYF-HGNSETHPFRIFA 829
Cdd:pfam02181 283 KDVKQLERGLKKLERELELSALDEHPDdKFREVLKEFLKSAEEKLDKLESLLREALELFKELVEYFgEDPKETSPEEFFK 362
                         410
                  ....*....|
gi 15224360   830 VVRDFLTILD 839
Cdd:pfam02181 363 ILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
439-846 1.47e-133

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 404.81  E-value: 1.47e-133
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    439 KKVETMKPKLKTLHWDKVRASSSRVMVWDQIKSNSfQVNEEMIETLFKVNDPT-------SRTRDGVVQSVSQENRFLDP 511
Cdd:smart00498   1 KKEPKPKKKLKPLHWDKLNPSDLSGTVWDKIDEES-EGDLDELEELFSAKEKTksaskdvSEKKSILKKKASQEFKILDP 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    512 RKSHNIAILLRALNVTADEVCEALIEGNSDTLGPELLECLLKMAPTKEEEDKLKELKDDDdgsPSKIGPAEKFLKALLNI 591
Cdd:smart00498  80 KRSQNLAILLRKLHMSYEEIKEAILEGDEDVLSVDLLEQLLKYAPTKEELKKLREYKEED---PEELARAEQFLLLISNI 156
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    592 PFAFKRIDAMLYIVKFESEIEYLNRSFDTLEAATGELKNTRMFLKLLEAVLKTGNRMNIGTNRGDAHAFKLDTLLKLVDI 671
Cdd:smart00498 157 PYLEERLNALLFKANFEEEVEDLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDV 236
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    672 KGADGKTTLLHFVVQEIIKFEgarvpftpsqshigdnmaeqsafqddlelkKLGLQVVSGLSSQLINV----KKAAAMDS 747
Cdd:smart00498 237 KSADNKTTLLHFLVKIIRKKY------------------------------LGGLSDPENLDDKFIEVmkpfLKAAKEKY 286
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224360    748 NSLINETAEIARGIAKVKEVITELKQETGVE----RFLESMNSFLNKGEKEITELQSHGDNVMKMVKEVTEYFHGNS--- 820
Cdd:smart00498 287 DKLQKDLSDLKTRFEKLVEYYGEDPKDTSPEeffkDFNEFLKEFSKAAEENIKKEEEEEERRKKLVKETTEYEQSSSrqk 366
                          410       420
                   ....*....|....*....|....*.
gi 15224360    821 ETHPFRIFAVVRDFLTILDQVCKEVG 846
Cdd:smart00498 367 ERNPSMDFEVERDFLGVLDSLLEELG 392
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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