NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15226868|ref|NP_181041|]
View 

cationic amino acid transporter 5 [Arabidopsis thaliana]

Protein Classification

cationic amino acid transporter( domain architecture ID 1903485)

cationic amino acid transporter are involved in the transport of the cationic amino acids

Gene Ontology:  GO:0006865|GO:0015171
PubMed:  10931886
TCDB:  2.A.3.3

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
2A0303 super family cl47123
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
54-559 0e+00

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00906:

Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 526.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    54 FELKKQSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGS 133
Cdd:TIGR00906  16 VDLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSA 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   134 FAYLRIELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLNRSPNALRIKTD--LSSGFNL-LDPIAVVVIAASATI 210
Cdd:TIGR00906  96 YLYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQIGQFRRTYFklNYDGLAEyPDFFAVCLILLLAVL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   211 ASISTRKTSLLNWIASAINTLVIFFVIIAGFIHADTSNLTP--------FLPFGPEGVFRAAAVVYFAYGGFDSIATMAE 282
Cdd:TIGR00906 176 LSFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSIteekgaggFMPYGFTGVLSGAATCFFAFIGFDAIATTGE 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   283 ETKNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDPNAAYSVAFQSVGMKWGKYLVALGALKGMTTVLLVGALG 362
Cdd:TIGR00906 256 EVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFP 335
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   363 QARYVTHIARTHMIPPIFALVHPKTGTPINANLLVAIPSALIAFFSGLDVLASLLSISTLFIFTMMPIALLVRRYYV--- 439
Cdd:TIGR00906 336 LPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQPglv 415
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   440 ------------RQDTPRVHL----------IKLITCLLFVVVSSMGTSAYWGMQRKGSWIGYTVTVPFWFLGTLGIVFF 497
Cdd:TIGR00906 416 ydqakdtdekdtLDSWVPFTSksesqsegfsLRTLFSGLILGLSILTTYGRAAIAEEAWSIALLTLFLVLFLLVVLTIWR 495
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15226868   498 VPQQRTPKVWGVPLVPWLPCLSIATNIFLMGSLGAMAFVRFGVCTLAMLLYYFLLGLHATFD 559
Cdd:TIGR00906 496 QPQNKQKVAFKVPLVPFLPALSILINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSLE 557
 
Name Accession Description Interval E-value
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
54-559 0e+00

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 526.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    54 FELKKQSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGS 133
Cdd:TIGR00906  16 VDLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSA 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   134 FAYLRIELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLNRSPNALRIKTD--LSSGFNL-LDPIAVVVIAASATI 210
Cdd:TIGR00906  96 YLYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQIGQFRRTYFklNYDGLAEyPDFFAVCLILLLAVL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   211 ASISTRKTSLLNWIASAINTLVIFFVIIAGFIHADTSNLTP--------FLPFGPEGVFRAAAVVYFAYGGFDSIATMAE 282
Cdd:TIGR00906 176 LSFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSIteekgaggFMPYGFTGVLSGAATCFFAFIGFDAIATTGE 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   283 ETKNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDPNAAYSVAFQSVGMKWGKYLVALGALKGMTTVLLVGALG 362
Cdd:TIGR00906 256 EVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFP 335
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   363 QARYVTHIARTHMIPPIFALVHPKTGTPINANLLVAIPSALIAFFSGLDVLASLLSISTLFIFTMMPIALLVRRYYV--- 439
Cdd:TIGR00906 336 LPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQPglv 415
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   440 ------------RQDTPRVHL----------IKLITCLLFVVVSSMGTSAYWGMQRKGSWIGYTVTVPFWFLGTLGIVFF 497
Cdd:TIGR00906 416 ydqakdtdekdtLDSWVPFTSksesqsegfsLRTLFSGLILGLSILTTYGRAAIAEEAWSIALLTLFLVLFLLVVLTIWR 495
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15226868   498 VPQQRTPKVWGVPLVPWLPCLSIATNIFLMGSLGAMAFVRFGVCTLAMLLYYFLLGLHATFD 559
Cdd:TIGR00906 496 QPQNKQKVAFKVPLVPFLPALSILINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSLE 557
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
57-461 8.97e-76

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 247.12  E-value: 8.97e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  57 KKQSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAhEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAY 136
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAA-GLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 137 LRIELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLNRSPNALriktdlssgfnlldpIAVVVIAASATIASISTR 216
Cdd:COG0531  81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVL---------------IALVLILLLTLLNLRGVK 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 217 KTSLLNWIASAINTLVIFFVIIAGFIHADTSNLTPFLPF--GPEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIPIG 294
Cdd:COG0531 146 ESAKVNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRA 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 295 LLGSMSIITVIYCLMALSLSMMQKYTDI-DPNAAYSVAFQSVGMKWGKYLVALGALKGMTTVLLVGALGQARYVTHIART 373
Cdd:COG0531 226 IILSLLIVGVLYILVSLALTGVVPYDELaASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARD 305
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 374 HMIPPIFALVHPKTGTPINANLLVAIPSALIAFFSG--LDVLASLLSISTLFIFTMMPIALLVRRYYVRQDTPRVHLIKL 451
Cdd:COG0531 306 GLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGAasFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLP 385
                       410
                ....*....|
gi 15226868 452 ITCLLFVVVS 461
Cdd:COG0531 386 LIPILGILLC 395
AA_permease_2 pfam13520
Amino acid permease;
68-461 4.53e-29

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 119.72  E-value: 4.53e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    68 LTWWDLVWFGFGSVIGAGIFVLTGQEAheqAGPAIVLSYVVSGLSAMLSV-FCYTEFAVEIPVAGGSFAYLRIELGDFAA 146
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVAS---GGPALIVWGWIAAIIFSLAVgLVYAELSSALPRSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   147 FITAGNILLESIVGTAAVARAWTSYFATLLNRSPNALRIKTDLssgfnlldpIAVVVIAASATIASISTRKTSLLNWIAS 226
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTTWLTYG---------IAIAILIIFAIINIRGVRESAKIQNILG 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   227 AINTLVIFFVIIA--------GFIHADTSNLTPFLPFGPEGVFRAAAVVYFAYGGFDSIATMAEETKNpsRDIPIGLLGS 298
Cdd:pfam13520 149 ILKLLLPLILIIIlglvtadgGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIG 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   299 MSIITVIYCLMALSLSM------MQKYTDIDPNAAysVAFQSVGMKWGKYLVALGALKGMTTVLLVGALGQARYVTHIAR 372
Cdd:pfam13520 227 VIIVGVLYILVNIAFFGvvpddeIALSSGLGQVAA--LLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALAR 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   373 THMIPPIFALVHP-KTGTPINANLLVAIPSALIAFFSGL-----DVLASLLSISTLFIFTMMPIALLVRRYyvRQDTPRV 446
Cdd:pfam13520 305 DGVLPFSRFFAKVnKFGSPIRAIILTAILSLILLLLFLLspaayNALLSLSAYGYLLSYLLPIIGLLILRK--KRPDLGR 382
                         410
                  ....*....|....*
gi 15226868   447 HLIKLITCLLFVVVS 461
Cdd:pfam13520 383 IPGRWPVAIFGILFS 397
frlA PRK11357
amino acid permease;
59-422 7.22e-18

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 86.45  E-value: 7.22e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   59 QSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHEQAGPAI-VLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAYL 137
Cdd:PRK11357   1 MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  138 RIELGDFAAFITAGNILLES-IVGTAAVARAWTSYFATLLNRSPNALR-IKTDLSSGFNLLDPIAVVVIAASATIASIST 215
Cdd:PRK11357  81 KNAGSRPLAFLSGWASFWANdAPSLSIMALAIVSNLGFLTPIDPLLGKfIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  216 rktsllnwiasaintlVIFFVIIAG----FIHADTSNLTPFLPFGPEGVFRA----AAVVYFAYGGFDSIATMAEETKNP 287
Cdd:PRK11357 161 ----------------IIPFTIVIGlgifWFKAENFAAPTTTAIGATGSFMAllagISATSWSYTGMASICYMTGEIKNP 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  288 SRDIPIGLLGSMSIITVIYCLMALSLSMMqkyTDIDPNAAySVAFQSVGMKWgkyLVALGALKG-----MTTVLLVGALG 362
Cdd:PRK11357 225 GKTMPRALIGSCLLVLVLYTLLALVISGL---MPFDKLAN-SETPISDALTW---IPALGSTAGifvaiTAMIVILGSLS 297
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15226868  363 -----QARYVTHIARTHMIPPIFALVHPKTGTPINANLLvaiPSALIAFFSGLDVLASLLSISTL 422
Cdd:PRK11357 298 scvmyQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIIL---QGALGIFFIFVSDLTSLLGYFTL 359
 
Name Accession Description Interval E-value
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
54-559 0e+00

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 526.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    54 FELKKQSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGS 133
Cdd:TIGR00906  16 VDLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSA 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   134 FAYLRIELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLNRSPNALRIKTD--LSSGFNL-LDPIAVVVIAASATI 210
Cdd:TIGR00906  96 YLYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQIGQFRRTYFklNYDGLAEyPDFFAVCLILLLAVL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   211 ASISTRKTSLLNWIASAINTLVIFFVIIAGFIHADTSNLTP--------FLPFGPEGVFRAAAVVYFAYGGFDSIATMAE 282
Cdd:TIGR00906 176 LSFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSIteekgaggFMPYGFTGVLSGAATCFFAFIGFDAIATTGE 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   283 ETKNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDPNAAYSVAFQSVGMKWGKYLVALGALKGMTTVLLVGALG 362
Cdd:TIGR00906 256 EVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFP 335
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   363 QARYVTHIARTHMIPPIFALVHPKTGTPINANLLVAIPSALIAFFSGLDVLASLLSISTLFIFTMMPIALLVRRYYV--- 439
Cdd:TIGR00906 336 LPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQPglv 415
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   440 ------------RQDTPRVHL----------IKLITCLLFVVVSSMGTSAYWGMQRKGSWIGYTVTVPFWFLGTLGIVFF 497
Cdd:TIGR00906 416 ydqakdtdekdtLDSWVPFTSksesqsegfsLRTLFSGLILGLSILTTYGRAAIAEEAWSIALLTLFLVLFLLVVLTIWR 495
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15226868   498 VPQQRTPKVWGVPLVPWLPCLSIATNIFLMGSLGAMAFVRFGVCTLAMLLYYFLLGLHATFD 559
Cdd:TIGR00906 496 QPQNKQKVAFKVPLVPFLPALSILINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSLE 557
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
57-461 8.97e-76

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 247.12  E-value: 8.97e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  57 KKQSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAhEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAY 136
Cdd:COG0531   2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAA-GLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 137 LRIELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLNRSPNALriktdlssgfnlldpIAVVVIAASATIASISTR 216
Cdd:COG0531  81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVL---------------IALVLILLLTLLNLRGVK 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 217 KTSLLNWIASAINTLVIFFVIIAGFIHADTSNLTPFLPF--GPEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIPIG 294
Cdd:COG0531 146 ESAKVNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRA 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 295 LLGSMSIITVIYCLMALSLSMMQKYTDI-DPNAAYSVAFQSVGMKWGKYLVALGALKGMTTVLLVGALGQARYVTHIART 373
Cdd:COG0531 226 IILSLLIVGVLYILVSLALTGVVPYDELaASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARD 305
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 374 HMIPPIFALVHPKTGTPINANLLVAIPSALIAFFSG--LDVLASLLSISTLFIFTMMPIALLVRRYYVRQDTPRVHLIKL 451
Cdd:COG0531 306 GLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGAasFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLP 385
                       410
                ....*....|
gi 15226868 452 ITCLLFVVVS 461
Cdd:COG0531 386 LIPILGILLC 395
AA_permease_2 pfam13520
Amino acid permease;
68-461 4.53e-29

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 119.72  E-value: 4.53e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    68 LTWWDLVWFGFGSVIGAGIFVLTGQEAheqAGPAIVLSYVVSGLSAMLSV-FCYTEFAVEIPVAGGSFAYLRIELGDFAA 146
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVAS---GGPALIVWGWIAAIIFSLAVgLVYAELSSALPRSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   147 FITAGNILLESIVGTAAVARAWTSYFATLLNRSPNALRIKTDLssgfnlldpIAVVVIAASATIASISTRKTSLLNWIAS 226
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTTWLTYG---------IAIAILIIFAIINIRGVRESAKIQNILG 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   227 AINTLVIFFVIIA--------GFIHADTSNLTPFLPFGPEGVFRAAAVVYFAYGGFDSIATMAEETKNpsRDIPIGLLGS 298
Cdd:pfam13520 149 ILKLLLPLILIIIlglvtadgGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIG 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   299 MSIITVIYCLMALSLSM------MQKYTDIDPNAAysVAFQSVGMKWGKYLVALGALKGMTTVLLVGALGQARYVTHIAR 372
Cdd:pfam13520 227 VIIVGVLYILVNIAFFGvvpddeIALSSGLGQVAA--LLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALAR 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   373 THMIPPIFALVHP-KTGTPINANLLVAIPSALIAFFSGL-----DVLASLLSISTLFIFTMMPIALLVRRYyvRQDTPRV 446
Cdd:pfam13520 305 DGVLPFSRFFAKVnKFGSPIRAIILTAILSLILLLLFLLspaayNALLSLSAYGYLLSYLLPIIGLLILRK--KRPDLGR 382
                         410
                  ....*....|....*
gi 15226868   447 HLIKLITCLLFVVVS 461
Cdd:pfam13520 383 IPGRWPVAIFGILFS 397
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
79-490 2.09e-21

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 97.51  E-value: 2.09e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    79 GSVIGAGIFVLTGQEAHEQAGPAIVL-SYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAYLRIELGDFAAFITAGNILLES 157
Cdd:TIGR00911  55 GTIIGSGIFVSPKGVLKNAGSVGLALiMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIELLVI 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   158 IVG-TAAVARAWTSYFATLL--NRSPNALRIKTdlssgfnlldpIAVVVIAASATIASISTRKTSLLNWIASAINTLVIF 234
Cdd:TIGR00911 135 RPGsQAVNALNFAIYILTPVfpDCEVPEWAIRL-----------VAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALL 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   235 FVIIAGFIH---ADTSNLTPFLPF-----GPEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIPIGLLGSMSIITVIY 306
Cdd:TIGR00911 204 LIIITGWVQlgkGGVESLNPKNAFegtetSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIY 283
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   307 CLMALS-LSMMQKYTDIDPNA-AYSVAFQSVG-MKWG-KYLVALGALKGMTTVLlvgaLGQARYVTHIARTHMIPPIFAL 382
Cdd:TIGR00911 284 VLTNIAyFTVLSPEELLASLAvAVDFGERLLGvMSWAmPALVGLSCFGSVNGSL----FSSSRLFFVGGREGHLPSLLSM 359
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   383 VHPKTGTPINANLLVAIPSALIAFFSGLDVLASLLSIStLFIFTMMPIALLVRRYYVRQDTPR---VHL----IKLITCL 455
Cdd:TIGR00911 360 IHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFA-NWLFNALAVAGLLWLRYKRPEMNRpikVPLffpvFFLLSCL 438
                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 15226868   456 LFVVVS----SMGTSAYWGMQRKGswigytvtVPFWFLG 490
Cdd:TIGR00911 439 FLIILSlyspPVGCGVGFIIMLTG--------VPVYFFG 469
AA_permease pfam00324
Amino acid permease;
72-425 7.31e-21

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 95.46  E-value: 7.31e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    72 DLVWFGFGSVIGAGIFVLTGQEAHEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAYLRIELGDFAAFITAG 151
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   152 NILLESIVgTAAVARAWTSYFATLLNRSPnalriktDLSSGFnlldpIAVVVIAASATIASISTRKTS-------LLNWI 224
Cdd:pfam00324  81 NYWLSWIT-VLALELTAASILIQFWELVP-------DIPYLW-----VWGAVFLVLLTIINLVGVKWYgeaefwfALIKI 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   225 ASAINTLVIFFVIIAGF---IHADTSNLT------PFLPFGPEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIPIGL 295
Cdd:pfam00324 148 IAIIGFIIVGIILLSGGnpnDGAIFRYLGdnggknNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAI 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   296 LGSMSIITVIYCLMALSLSMMQKYTD-------IDPNAAYSVAFQSVGMKWGKYLVALGALKGMTTVLLVGALGQARYVT 368
Cdd:pfam00324 228 LQVIWRITIFYILSLLAIGLLVPWNDpgllndsASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLY 307
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   369 HIARTHMIPPIFAlVHPKTGTPINANLLVAIPSA---LIAFFSGLDVLASLLSISTLFIF 425
Cdd:pfam00324 308 SLARDGLAPKFLK-KVDKRGVPLRAILVSMVISLlalLLASLNPAIVFNFLLAISGLSGL 366
frlA PRK11357
amino acid permease;
59-422 7.22e-18

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 86.45  E-value: 7.22e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   59 QSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHEQAGPAI-VLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAYL 137
Cdd:PRK11357   1 MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  138 RIELGDFAAFITAGNILLES-IVGTAAVARAWTSYFATLLNRSPNALR-IKTDLSSGFNLLDPIAVVVIAASATIASIST 215
Cdd:PRK11357  81 KNAGSRPLAFLSGWASFWANdAPSLSIMALAIVSNLGFLTPIDPLLGKfIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  216 rktsllnwiasaintlVIFFVIIAG----FIHADTSNLTPFLPFGPEGVFRA----AAVVYFAYGGFDSIATMAEETKNP 287
Cdd:PRK11357 161 ----------------IIPFTIVIGlgifWFKAENFAAPTTTAIGATGSFMAllagISATSWSYTGMASICYMTGEIKNP 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  288 SRDIPIGLLGSMSIITVIYCLMALSLSMMqkyTDIDPNAAySVAFQSVGMKWgkyLVALGALKG-----MTTVLLVGALG 362
Cdd:PRK11357 225 GKTMPRALIGSCLLVLVLYTLLALVISGL---MPFDKLAN-SETPISDALTW---IPALGSTAGifvaiTAMIVILGSLS 297
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15226868  363 -----QARYVTHIARTHMIPPIFALVHPKTGTPINANLLvaiPSALIAFFSGLDVLASLLSISTL 422
Cdd:PRK11357 298 scvmyQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIIL---QGALGIFFIFVSDLTSLLGYFTL 359
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
59-432 1.07e-17

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 85.94  E-value: 1.07e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  59 QSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHeQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGgSFA-YL 137
Cdd:COG1113   8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIA-LAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSG-SFSdYA 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 138 RIELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLnrsPNAlriktdlssgfnlldPIAVVVIAASATIASIStrk 217
Cdd:COG1113  86 REYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWF---PDV---------------PQWVWALVFLVLLTAIN--- 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 218 tsLLN---------WIAS----AINTLVIF--FVIIAGFI-----HADTSNLT---PFLPFGPEGVFRAAAVVYFAYGGF 274
Cdd:COG1113 145 --LLSvklfgefefWFALikvvAIVAFIVVglLLIFFGFGlpggpPAGLSNLWdhgGFFPNGIGGVLAALQIVVFAFGGI 222
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 275 DSIATMAEETKNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDPNAA-YSVAFQSVGMKWGKYLvalgalkgMT 353
Cdd:COG1113 223 ELVGIAAAEAKDPEKTIPKAINSVIWRILLFYVGSLFVILALVPWNQIGAGGSpFVTVFSLLGIPAAAGI--------MN 294
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 354 TVLLVGAL--------GQARYVTHIARTHMIPPIFALVHpKTGTPINANLL---VAIPSALIAFFSGLDVLASLLSISTL 422
Cdd:COG1113 295 FVVLTAALsslnsglySTSRMLYSLAERGDAPKFFGKLS-KRGVPVRAILLsavVLLIGVVLNYLLPEKAFTFLLSISGF 373
                       410
                ....*....|.
gi 15226868 423 -FIFTMMPIAL 432
Cdd:COG1113 374 gALFVWLMILV 384
AA_permease_C pfam13906
C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured ...
507-557 3.90e-16

C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured by the models pfam00324 and pfam13520.


Pssm-ID: 464034  Cd Length: 51  Bit Score: 72.23  E-value: 3.90e-16
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 15226868   507 WGVPLVPWLPCLSIATNIFLMGSLGAMAFVRFGVCTLAMLLYYFLLGLHAT 557
Cdd:pfam13906   1 FKVPLVPFLPALSILVNIYLMVQLDSLTWIRFGIWMLIGLLIYFGYGIRHS 51
2A0305 TIGR00908
ethanolamine permease; The three genes used as the seed for this model (from Burkholderia ...
63-446 2.84e-14

ethanolamine permease; The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129986 [Multi-domain]  Cd Length: 442  Bit Score: 75.26  E-value: 2.84e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    63 EMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAheQAGPaivLSYVVSGL--SAMLSVFC--YTEFAVEIPVAGGSFAYLR 138
Cdd:TIGR00908   4 QLKKTLATWQLWGIGVGYVISGDYAGWNFGLA--QGGW---GGFVVATLlvATMYLTFCfsLAELSTMIPTAGGGYGFAR 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   139 IELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLNRSPNALriktdLSSGFNLLdpIAVVVIAASATIASISTRKT 218
Cdd:TIGR00908  79 RAFGPWGGFLAGTAILIEFAFAPPAIACFIGAYCESLFPVGPGWL-----AALVFYIV--FIGINILGVGEAAKLEFVVT 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   219 SLlnwiasAINTLVIFFVIIAgfIHADTSNL--------TPFLPFGPEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRD 290
Cdd:TIGR00908 152 AV------AIIALGVFIGAMV--PHFDSANLfngpqtgaSSFLPGAYVGVFAAIPFAIWFFLAVEGVAMAAEETKNPKRD 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   291 IPIGLLGSM------SIITVIYCLMALSLSMMQKYTDIDPNAAYSVAFQSVGmkWGKYLVALGaLKGMTTVLLVGALGQA 364
Cdd:TIGR00908 224 IPRGLIGAIltllalAAGILVVGPGAADAKELMGSNNPLPEALESIYGGSTW--MSQFVNLVG-LFGLIASFHGIIYGYS 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   365 RYVTHIARTHMIPPIFALVHPKtGTPINAnllVAIPSALIAFFSGLDVLASLLSISTlFIFTMMPIALLVRRYYVRQDTP 444
Cdd:TIGR00908 301 RQIFALSRAGYLPESLSKVNRK-KAPVLA---IVVPGVIGFGLSLTGQTALIILVSV-FGAIISYVLSMAAHFTLRIRRP 375

                  ..
gi 15226868   445 RV 446
Cdd:TIGR00908 376 DM 377
PRK10644 PRK10644
arginine/agmatine antiporter;
79-469 1.48e-11

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 66.74  E-value: 1.48e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   79 GSVIGAGIFVLTGQEAheQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAYLRIELGDFAAFITAGNILLESI 158
Cdd:PRK10644  21 GNIMGSGVFLLPANLA--STGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACW 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  159 VGTAAVARA---WTSYFATLLnRSPNALRIKTD----LSSGFNLLDPIAVVVIAASATI-ASISTRKTSLLNWIasaint 230
Cdd:PRK10644  99 IGNIAMVVIgvgYLSYFFPIL-KDPLVLTITCVvvlwIFVLLNIVGPKMITRVQAVATVlALIPIVGIAVFGWF------ 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  231 lviFFviiAGFIHADTSNLTPFLPFGpeGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIPIGLLGSMSIITVIYCLMA 310
Cdd:PRK10644 172 ---WF---RGETYMAAWNVSGLGTFG--AIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSS 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  311 LSLSMMQkytdidPNAAYSVAFQSVGMK-------WGKYLVA-------LGALKGMTtvLLVGALGQAryvthIARTHMI 376
Cdd:PRK10644 244 TAIMGMI------PNAALRVSASPFGDAarmalgdTAGAIVSfcaaagcLGSLGGWT--LLAGQTAKA-----AADDGLF 310
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  377 PPIFALVHpKTGTPINANLLVAIPSALIAFFS-------GLDVLASLLSISTL--FIFTMMPIALLVRRYYvRQDTPRVH 447
Cdd:PRK10644 311 PPIFARVN-KAGTPVAGLLIVGVLMTIFQLSSispnaskEFGLVSSVSVIFTLvpYLYTCAALLLLGHGHF-GKARPAYL 388
                        410       420
                 ....*....|....*....|....
gi 15226868  448 LIKLITCL--LFVVVSSMGTSAYW 469
Cdd:PRK10644 389 AVTLIAFVycIWAVVGSGAKEVMW 412
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
59-441 1.69e-11

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 66.35  E-value: 1.69e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  59 QSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHeQAGP-AIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGgsfayl 137
Cdd:COG0833   5 EKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTIS-QAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSG------ 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 138 rielgdfaAFITAGNILLESIVGtaaVARAWtSYFATLlnrspnALRIKTDLSSGFNLLD---PiAVVVIAASATIASIS 214
Cdd:COG0833  78 --------SFQTYATRFIDPAFG---FAVGW-NYWLNW------AITVAAELTAAGIIMQywfP-DVPVWIWSLLFLALI 138
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 215 TrktsLLNWIA-----------SAIN--TLVIFFVI----IAGFIHADT---SNLTP---FLPFGPEGVFRAAAVVYFAY 271
Cdd:COG0833 139 F----LLNALSvkafgesefwfSLIKviTVIAFIIVgllmIFGIIGGHApgfSNFTTgdgPFPGGFLAILGVMMIVGFSF 214
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 272 GGFDSIATMAEETKNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTdiDPNAAYSV---AFQSVGMKWGKYLvalga 348
Cdd:COG0833 215 QGTELIGIAAGESENPEKTIPKAIRQVFWRILLFYILAIFVIAALIPYT--DAGVAESPftlVFERAGIPYAADI----- 287
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868 349 lkgMTTVLLVGAL--------GQARYVTHIARTHMIPPIFALVHpKTGTPINAnLLVAIPSALIAFFSGLD----VLASL 416
Cdd:COG0833 288 ---MNAVILTAVLsagnsglyASTRMLWSLAKEGMAPKIFAKLN-KRGVPLNA-LLATMAVGLLALLSSFFgagtVYLWL 362
                       410       420
                ....*....|....*....|....*....
gi 15226868 417 LSISTLFIF-TMMPIA---LLVRRYYVRQ 441
Cdd:COG0833 363 LSISGLTGFiAWLGIAishYRFRRAYVAQ 391
PRK10238 PRK10238
aromatic amino acid transporter AroP;
58-506 1.07e-09

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 60.74  E-value: 1.07e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   58 KQSEHEMKRCLTWWDLVWFGFGSVIGAGIFvLTGQEAHEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAgGSFAYL 137
Cdd:PRK10238   4 QQHGEQLKRGLKNRHIQLIALGGAIGTGLF-LGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVA-GSFSHF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  138 RIEL-GDFAAFITAGNILLESIVGTAAVARAWTSYFATLLNRSPnalrikTDLSSgfnlldpiAVVVIAASATIASISTR 216
Cdd:PRK10238  82 AYKYwGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIP------TWVSA--------AVFFVVINAINLTNVKV 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  217 KTSLLNWIASAINTLVIFFVIIAGFI--------HADTSNL---TPFLPFGPEGVFRAAAVVYFAYGGFDSIATMAEETK 285
Cdd:PRK10238 148 FGEMEFWFAIIKVIAVVAMIIFGGWLlfsgnggpQATVSNLwdqGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEAD 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  286 NPSRDIPIGLLGSMSIITVIYC-LMALSLSMMqKYTDIdpnAAYSVAFQSVGMKWGKYLVAlgalKGMTTVLLVGALG-- 362
Cdd:PRK10238 228 NPEQSIPKATNQVIYRILIFYIgSLAVLLSLM-PWTRV---TADTSPFVLIFHELGDTFVA----NALNIVVLTAALSvy 299
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  363 ------QARYVTHIARTHMIPPIFALVHpKTGTPINANLLVAIPSAL------IAFFSGLDVLASLLSISTLFIFTMMPI 430
Cdd:PRK10238 300 nscvycNSRMLFGLAQQGNAPKALASVD-KRGVPVNTILVSALVTALcvlinyLAPESAFGLLMALVVSALVINWAMISL 378
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  431 ALLVRRYYVRQDTPRVHLIKLI------TCLLFVVVSSMGTSAYWGMQrKGSWIgytvtVPFWFLgTLGIVFFVPQQRTP 504
Cdd:PRK10238 379 AHMKFRRAKQEQGVVTRFPALLyplgnwICLLFMAAVLVIMLMTPGMA-ISVYL-----IPVWLI-VLGIGYLFKEKTAK 451

                 ..
gi 15226868  505 KV 506
Cdd:PRK10238 452 AV 453
PRK10249 PRK10249
phenylalanine transporter; Provisional
55-441 1.90e-08

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 56.92  E-value: 1.90e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   55 ELKKQSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGqEAHEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAgGSF 134
Cdd:PRK10249  10 DTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIG-PAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVS-GSF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  135 AYLRIEL-GDFAAFITAGNI-LLESIVGTAAVARA---------------WTSYFATLLNR-SPNALRIKTDLSSGFNLL 196
Cdd:PRK10249  88 AHFAYKYwGPFAGFLSGWNYwVMFVLVGMAELTAAgiymqywfpdvptwiWAAAFFIIINAvNLVNVRLYGETEFWFALI 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  197 DPIAVVVIAASATiasistrktsllnWIASAINtlviffviiaGFIHADTSNL---TPFLPFGPEGVFRAAAVVYFAYGG 273
Cdd:PRK10249 168 KVLAIIGMIGFGL-------------WLLFSGH----------GGEKASIDNLwryGGFFATGWNGLILSLAVIMFSFGG 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  274 FDSIATMAEETKNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDPNAA-YSVAFQSVGMKWGKYLVALGALKGM 352
Cdd:PRK10249 225 LELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSpFVMIFHNLDSNVVASALNFVILVAS 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  353 TTVLLVGALGQARYVTHIARTHMIPPIFALVhPKTGTPINANLLVAIPSALIAFFS------GLDVLASLLSISTLFIFT 426
Cdd:PRK10249 305 LSVYNSGVYSNSRMLFGLSVQGNAPKFLTRV-SRRGVPINSLMLSGAITSLVVLINyllpqkAFGLLMALVVATLLLNWI 383
                        410
                 ....*....|....*
gi 15226868  427 MMPIALLVRRYYVRQ 441
Cdd:PRK10249 384 MICLAHLRFRAAMRR 398
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
61-434 2.18e-08

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 56.68  E-value: 2.18e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    61 EHEMKRCLTWWDLVWFGFgSVIGAGIFVLTGQEAHEQAG--PAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAYLR 138
Cdd:TIGR00907   7 KPELKREFSLWSIFGFAF-SISNSWTGISTTYNYGLSSGgaMSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   139 IELGD----FAAFITAgnilLESIVGTAAVARAWTSYFATLLnrspnalRIKTDLSSGFNLLDP----IAVVVIAASATI 210
Cdd:TIGR00907  86 KLAPPrqmpFASWMTG----WFNLAGQVAGTASTDLSVAQLI-------LGIVSLTTPGREYIPtrwhIFGIMIGIHLIH 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   211 ASISTRKTSLLNWIAS--AINTLVIFFVII-------------AGFIHADTSNLTPflPFGPEGVFRAAAVVYFAYG--G 273
Cdd:TIGR00907 155 ALINSLPTKWLPRITSsaAYWSLLGFLTICitllackspkfndGKFVFTNFNNSTG--GWKPGGFAFLLGLLNPAWSmtG 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   274 FDSIATMAEETKNPSRDIPIGLLGSMSIITVI--YCLMALSLSMMQKYTDIDPNAAYSVA---FQSVGMKWGKYLVALGA 348
Cdd:TIGR00907 233 YDGTAHMAEEIENPEVVGPRAIIGAVAIGIVTgfCFNIVLFFSMGDIDSLISSTTGQPIAqifYNALGNKAGAIFLLCLI 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   349 LKGMTTVLLVGALGQARYVTHIARTHMIP--PIFALVHPKTGTPINANLLvaipSALIAFFSGLDVLASLLSISTlfIFT 426
Cdd:TIGR00907 313 LVTSFFCAITCMTANSRMIYAFSRDGGLPfsPLWSRVNPRTQVPLNAVWL----SAVWIILIGLLGLGSSTAFQA--IFS 386

                  ....*...
gi 15226868   427 MMPIALLV 434
Cdd:TIGR00907 387 VCTVALDV 394
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
79-432 4.52e-08

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 55.75  E-value: 4.52e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868    79 GSVIGAGIFVLTGQEAHEqAGPA-IVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAylrielgdfaafiTAGNILLES 157
Cdd:TIGR00913  15 GGTIGTGLLVGSGTALAT-GGPAgLLIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFA-------------TYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   158 IVGTAAVARAWTSYFATLlnrsPNALRIKTDLSSGFNLLDPIAVVVIAASATIASISTRKTSLL---NWIASAINTLVIF 234
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVL----PLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYgeaEFWFSSIKILAII 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   235 FVIIAGFI----HADTS---------NLTPFLPFGPEGVFRAAAVV----YFAYGGFDSIATMAEETKNPSRDIPIGLLG 297
Cdd:TIGR00913 157 GFIILSIIlncgGGPNHgyigfrywhDPGAFAGGTIGGRFKGVCSVfvtaAFSFGGTELVALTAGEAANPRKSIPRAAKR 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   298 SMSIITVIYCLMALSLSMMQKYTD---------IDPNAA-YSVAFQSVGMKWGKYLvalgalkgMTTVLLVGALGQA--- 364
Cdd:TIGR00913 237 TFWRILVFYILTLFLIGFLVPYNDprllsssssSDSAASpFVIAIQNHGIKVLPHI--------FNAVILISVLSAAnss 308
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15226868   365 -----RYVTHIARTHMIPPIFALVHpKTGTPINAnLLVAIPSALIAFF----SGLDVLASLLSISTLF-IFTMMPIAL 432
Cdd:TIGR00913 309 lyassRTLYALAHQGLAPKIFAYVD-RRGVPYVA-VIVSSLFGLLAFLavskKEAEVFTWLLNISGLSgFFTWMCICL 384
proY PRK10580
putative proline-specific permease; Provisional
59-428 1.82e-07

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 53.67  E-value: 1.82e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   59 QSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGqEAHEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAYLR 138
Cdd:PRK10580   2 ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSA-DAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  139 IELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLNRSPNALRIktdlssgfnlldpIAVVVIAASATIASIstRKT 218
Cdd:PRK10580  81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWV-------------LSVVLIICAVNLMSV--KVF 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  219 SLLNWIASAINTLVIFFVIIAGF---------------IHADTSNlTPFLPFGPEGVFRAAAVVYFAYGGFDSIATMAEE 283
Cdd:PRK10580 146 GELEFWFSFFKVATIIIMIVAGIgiiiwgignggqptgIHNLWSN-GGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGE 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  284 TKNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDPNAA-YSVAFQSVGMKWGKYLVALGALKGMTTVLLVGALG 362
Cdd:PRK10580 225 AKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTNGSpFVLTFQHMGITFAASILNFVVLTASLSAINSDVFG 304
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15226868  363 QARYVTHIARTHMIPPIFALVhPKTGTP------INANLLVAIPSALIAFFSGLDVLASLLSISTLFIFTMM 428
Cdd:PRK10580 305 VGRMLHGMAEQGSAPKIFSKT-SRRGIPwvtvlvMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMI 375
PRK11021 PRK11021
putative transporter; Provisional
224-412 2.41e-05

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 46.83  E-value: 2.41e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  224 IASAINTLVIFFVIIAGFIHADTSNLTPFLPfGPEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIPIGLLGSMSIIT 303
Cdd:PRK11021 144 IALLIVALVVAIWWAGDIKPADIPFPAPGSI-EWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAG 222
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  304 VIYCLMALSLSMMQKYTDIDPNAAYSVA-FQSVGMKWGKYLVA-LGALKGMTTVLLVGAlGQARYVTHIARTHMIPPIFA 381
Cdd:PRK11021 223 LVYWACTVVVLHFPAYGDKQAAAASLPGiFVQLFGGYALWVICvIGYLACFASVNIYTQ-SFARLVWSQAREGRPPSYLA 301
                        170       180       190
                 ....*....|....*....|....*....|....
gi 15226868  382 LVHPKtGTPINANLLV---AIPSALIAFFSGLDV 412
Cdd:PRK11021 302 RLSAR-GVPVNALNAVlgcCAVSILLIYALGLNL 334
PRK11387 PRK11387
S-methylmethionine permease;
55-410 3.28e-05

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 46.77  E-value: 3.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   55 ELKKQSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSF 134
Cdd:PRK11387   3 EPTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFH 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  135 AYLRIELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLNRSPnalriktdlssgfnlLDPIAVVVIAASATIASIS 214
Cdd:PRK11387  83 VYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVP---------------VWPWCLLFCALIFGLNVVS 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  215 TRKTSLLNWIASAIN--TLVIFFVI----IAGFIHADTSNLTPFL---------PFGPEGVFRAAAVVYFAYGGFDSIAT 279
Cdd:PRK11387 148 TRFFAEGEFWFSLIKvvTILAFIVLggaaIFGFIPMQDGSPAPGLrnltaegwfPHGGLPILMTMVAVNFAFSGTELIGI 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  280 MAEETKNPSRDIPIGLLGSMSIITVIYC----LMALSLSMMQKYTDIDPnaaYSVAFQSVGMKWGKYLVALGALKGMTTV 355
Cdd:PRK11387 228 AAGETENPAKVIPVAIRTTIARLVIFFVgtvlVLAALIPMQQAGVEKSP---FVLVFEKVGIPYAADIFNFVILTAILSA 304
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 15226868  356 LLVGALGQARYVTHIARTHMIPPIFALVHpKTGTPINAnLLVAIPSALIAFFSGL 410
Cdd:PRK11387 305 ANSGLYASGRMLWSLSNEGTLPACFARLT-KRGIPLTA-LSVSMLGGLLALFSSV 357
PRK15238 PRK15238
inner membrane transporter YjeM; Provisional
266-343 4.33e-04

inner membrane transporter YjeM; Provisional


Pssm-ID: 237929 [Multi-domain]  Cd Length: 496  Bit Score: 43.01  E-value: 4.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  266 VVY--FAYGGFDSIATMAEETKNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDP-------NAAYsVAFQSVG 336
Cdd:PRK15238 217 VVFaiFAYGGIEAVGGLVDKTENPEKNFPKGIIIAAIVISIGYSLAIFLWGVSTNWQQVLSnksvnlgNITY-VLMNNLG 295

                 ....*..
gi 15226868  337 MKWGKYL 343
Cdd:PRK15238 296 YTLGHAL 302
PRK10836 PRK10836
lysine transporter; Provisional
55-441 1.29e-03

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 41.34  E-value: 1.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   55 ELKKQSEHEMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAhEQAGP-AIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGgs 133
Cdd:PRK10836   4 ETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATI-SQAGPgGALLSYMLIGLMVYFLMTSLGELAAYMPVSG-- 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  134 faylrielgdfaAFITAGNILLESIVGTAAVARAWTSYfatllnrspnALRIKTDLSSG---FNLLDPIAVVVIAASATI 210
Cdd:PRK10836  81 ------------SFATYGQNYVEEGFGFALGWNYWYNW----------AVTIAVDLVAAqlvMSWWFPDTPGWIWSALFL 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  211 ASIstrktSLLNWIAS-------------AINTLVIFFV--------IIAGFIHADTSNLT----PFLPfGPEGVFRAAA 265
Cdd:PRK10836 139 GVI-----FLLNYISVrgfgeaeywfsliKVTTVIVFIIvgvlmiigIFKGAEPAGWSNWTigdaPFAG-GFAAMIGVAM 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  266 VVYFAYGGFDSIATMAEETKNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTdiDPN-----------AAYSVAFQS 334
Cdd:PRK10836 213 IVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYT--DPSllrndvkdisvSPFTLVFQH 290
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  335 VGMkwgkylvaLGALKGMTTVLLVGAL--------GQARYVTHIARTHMIPPIFALVhPKTGTPINA---NLLVAIPSAL 403
Cdd:PRK10836 291 AGL--------LSAAAVMNAVILTAVLsagnsgmyASTRMLYTLACDGKAPRIFAKL-SRGGVPRNAlyaTTVIAGLCFL 361
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|...
gi 15226868  404 IAFFSGLDVLASLLSIS--TLFIfTMMPIAL---LVRRYYVRQ 441
Cdd:PRK10836 362 TSMFGNQTVYLWLLNTSgmTGFI-AWLGIAIshyRFRRGYVLQ 403
potE PRK10655
putrescine transporter; Provisional
83-308 3.61e-03

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 40.01  E-value: 3.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868   83 GAGIFVLTGQEAheQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAYLRIELGDFAAFITAGNILLESIVGTA 162
Cdd:PRK10655  23 GSGIIMLPTKLA--QVGTISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANV 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15226868  163 AVARAWTSYFATLLNRSPNALRIktdlssgfnLLDPIAVVVIAASATI--ASISTRKTSLLNW--IASAINTLVIFFVII 238
Cdd:PRK10655 101 AIAISAVGYGTELFGATLSPVQI---------CLATIGVLWLCTVANFggARITGQISSVTVWgvIIPVVGLSIIGWFWF 171
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15226868  239 AGFIHADTSNltPF-LPFGpEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIPIGLLGSMSIITVIYCL 308
Cdd:PRK10655 172 SPSLYVAAWN--PHhLPFF-SAVGSSIAMTLWAFLGLESACANSDAVENPERNVPIAVLGGTLGAAVIYIV 239
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH