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Conserved domains on  [gi|15227037|ref|NP_180477|]
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laccase 2 [Arabidopsis thaliana]

Protein Classification

laccase family protein( domain architecture ID 1003049)

laccase acts as a multicopper oxidase that oxidizes a variety of phenolic substrates, performing one-electron oxidations, leading to crosslinking

Gene Ontology:  GO:0005507
PubMed:  21063888

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
laccase super family cl37260
laccase, plant; Members of this protein family include the copper-containing enzyme laccase ...
27-573 0e+00

laccase, plant; Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.


The actual alignment was detected with superfamily member TIGR03389:

Pssm-ID: 274556 [Multi-domain]  Cd Length: 539  Bit Score: 907.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    27 GITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQC 106
Cdd:TIGR03389   1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   107 PIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRATVYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADPQAVVQQALQTG 186
Cdd:TIGR03389  81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   187 AGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLG 266
Cdd:TIGR03389 161 GAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   267 PGQTTNVLLKTKPiYPNaTFYMLARPYFTGQGTIDNTTVAGILQYQHHTKSSKnlsIIKPSLPPINSTSYAANFTKMFRS 346
Cdd:TIGR03389 241 PGQTTNVLLTADQ-SPG-RYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAK---PILPTLPAYNDTAAATNFSNKLRS 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   347 LASSTFPANVPKVVDKQYFFAIGLGTNPCPkNQTCQGPtNTTKFAASINNVSFILPNkTSLLQSYFVGkSKNVFMTDFPT 426
Cdd:TIGR03389 316 LNSAQYPANVPVTIDRRLFFTIGLGLDPCP-NNTCQGP-NGTRFAASMNNISFVMPT-TALLQAHYFG-ISGVFTTDFPA 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   427 APIIPFNYTGTP-PNNTMVSRGTKVVVLKYKTTVELVLQGTSILGIEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLV 505
Cdd:TIGR03389 392 NPPTKFNYTGTNlPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLV 471
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15227037   506 DPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVLDGDLPNQKLLPPPSDFPKC 573
Cdd:TIGR03389 472 DPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539
 
Name Accession Description Interval E-value
laccase TIGR03389
laccase, plant; Members of this protein family include the copper-containing enzyme laccase ...
27-573 0e+00

laccase, plant; Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.


Pssm-ID: 274556 [Multi-domain]  Cd Length: 539  Bit Score: 907.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    27 GITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQC 106
Cdd:TIGR03389   1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   107 PIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRATVYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADPQAVVQQALQTG 186
Cdd:TIGR03389  81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   187 AGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLG 266
Cdd:TIGR03389 161 GAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   267 PGQTTNVLLKTKPiYPNaTFYMLARPYFTGQGTIDNTTVAGILQYQHHTKSSKnlsIIKPSLPPINSTSYAANFTKMFRS 346
Cdd:TIGR03389 241 PGQTTNVLLTADQ-SPG-RYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAK---PILPTLPAYNDTAAATNFSNKLRS 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   347 LASSTFPANVPKVVDKQYFFAIGLGTNPCPkNQTCQGPtNTTKFAASINNVSFILPNkTSLLQSYFVGkSKNVFMTDFPT 426
Cdd:TIGR03389 316 LNSAQYPANVPVTIDRRLFFTIGLGLDPCP-NNTCQGP-NGTRFAASMNNISFVMPT-TALLQAHYFG-ISGVFTTDFPA 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   427 APIIPFNYTGTP-PNNTMVSRGTKVVVLKYKTTVELVLQGTSILGIEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLV 505
Cdd:TIGR03389 392 NPPTKFNYTGTNlPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLV 471
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15227037   506 DPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVLDGDLPNQKLLPPPSDFPKC 573
Cdd:TIGR03389 472 DPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539
PLN02604 PLN02604
oxidoreductase
9-547 4.03e-86

oxidoreductase


Pssm-ID: 215324 [Multi-domain]  Cd Length: 566  Bit Score: 278.28  E-value: 4.03e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    9 LLVAFLFAIS-YNIDAASAGItRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHV-SNNISIHW 86
Cdd:PLN02604   4 FLALFFLLFSvLNFPAAEARI-RRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLlTENVAIHW 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   87 HGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTgQRGTLWWHAHIQWMR-ATVYGPLIILPKLHQPYPFPKPYKQvPI 165
Cdd:PLN02604  83 HGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVVD-RPGTYLYHAHYGMQReAGLYGSIRVSLPRGKSEPFSYDYDR-SI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  166 LFGEWFNAdpqAVVQQALQTGAGPnasdaHTFNGLPGPL-------YNCSTKDT-----------------YKLMVKPGK 221
Cdd:PLN02604 161 ILTDWYHK---STYEQALGLSSIP-----FDWVGEPQSLliqgkgrYNCSLVSSpylkagvcnatnpecspYVLTVVPGK 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  222 TYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPiYPNATFYM----LARPYFTGQ 297
Cdd:PLN02604 233 TYRLRISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQ-DPSRNYWVttsvVSRNNTTPP 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  298 GTidnttvaGILQY--QHHTKSSknlSIIKPSLPPINSTSYAANFTKMFRSLASSTFPAnvPKVVDKQYFFaigLGTnpc 375
Cdd:PLN02604 312 GL-------AIFNYypNHPRRSP---PTVPPSGPLWNDVEPRLNQSLAIKARHGYIHPP--PLTSDRVIVL---LNT--- 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  376 pknqtcQGPTNTTkFAASINNVSFILPNKtsllqSYFVGKSKNVFMTDFPTAPiiPFNY------TGTPPNNTMVSRGTK 449
Cdd:PLN02604 374 ------QNEVNGY-RRWSVNNVSFNLPHT-----PYLIALKENLTGAFDQTPP--PEGYdfanydIYAKPNNSNATSSDS 439
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  450 VVVLKYKTTVELVLQGTSILGI---EAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFL 526
Cdd:PLN02604 440 IYRLQFNSTVDIILQNANTMNAnnsETHPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFR 519
                        570       580
                 ....*....|....*....|.
gi 15227037  527 ADNPGVWLMHCHIEIHLSWGL 547
Cdd:PLN02604 520 ADNPGVWAFHCHIESHFFMGM 540
CuRO_3_LCC_plant cd13897
The third cupredoxin domain of the plant laccases; Laccase is a blue multicopper oxidase (MCO) ...
419-556 9.91e-82

The third cupredoxin domain of the plant laccases; Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259964 [Multi-domain]  Cd Length: 139  Bit Score: 252.18  E-value: 9.91e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 419 VFMTDFPTAPIIPFNYTGTPPN-NTMVSRGTKVVVLKYKTTVELVLQGTSILGIEAHPIHLHGFNFYVVGQGFGNFNPAR 497
Cdd:cd13897   1 VYTTDFPDRPPVPFDYTGNAPNeNTPTSRGTKVKVLEYGSTVEIVLQGTSLLAAENHPMHLHGFDFYVVGRGFGNFDPST 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 15227037 498 DPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVLDG 556
Cdd:cd13897  81 DPATFNLVDPPLRNTVGVPRGGWAAIRFVADNPGVWFMHCHFERHTSWGMATVFIVKNG 139
Cu-oxidase_3 pfam07732
Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are ...
35-149 9.54e-51

Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are not recognized by the pfam00394 model.


Pssm-ID: 462247 [Multi-domain]  Cd Length: 119  Bit Score: 170.12  E-value: 9.54e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    35 DIQLKNITRLCKTKTIV-TVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPIRMGQS 113
Cdd:pfam07732   1 TVTYGTVSPLGGTRQAViGVNGQFPGPTIRVREGDTVVVNVTNNLDEPTSIHWHGLQQRGTPWMDGVPGVTQCPIPPGQS 80
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 15227037   114 YVYNFTVTGQRGTLWWHAHIQWMR-ATVYGPLIILPK 149
Cdd:pfam07732  81 FTYRFQVKQQAGTYWYHSHTSGQQaAGLAGAIIIEDR 117
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
46-553 8.98e-38

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 144.69  E-value: 8.98e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  46 KTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRqLRSGwADGpsyVTQCPIRMGQSYVYNFTVTGQRG 125
Cdd:COG2132  31 KPTTVWGYNGQYPGPTIRVREGDRVRVRVTNRLPEPTTVHWHGLR-VPNA-MDG---VPGDPIAPGETFTYEFPVPQPAG 105
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 126 TLWWHAHIqwMRATV-------YGPLIILPKLHQpypFPKPYKQVPILFGEW-FNADPQAVVQQALQTGAGPnaSDAHTF 197
Cdd:COG2132 106 TYWYHPHT--HGSTAeqvyrglAGALIVEDPEED---LPRYDRDIPLVLQDWrLDDDGQLLYPMDAAMGGRL--GDTLLV 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 198 NGLPGPLYNcstkdtyklmVKPGKTYLLRLINAALNDelFFTIA---NHTLTVVEADACYV-KPFQTNIVLLGPGQTTNV 273
Cdd:COG2132 179 NGRPNPTLE----------VRPGERVRLRLLNASNAR--IYRLAlsdGRPFTVIATDGGLLpAPVEVDELLLAPGERADV 246
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 274 LLKTKPiyPNATFYMLARPYFTGQGtidnttvagilqyqhhtkssKNLSIIKPSlppinstsyaanftkmfRSLASSTFP 353
Cdd:COG2132 247 LVDFSA--DPGEEVTLANPFEGRSG--------------------RALLTLRVT-----------------GAAASAPLP 287
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 354 ANVPKVVDkqyffaIGLGTNPCPKNQTCQGPTNTTKFaaSINNVSFilpnktsllqsyfvgksknvfmtDfPTAPIIpfn 433
Cdd:COG2132 288 ANLAPLPD------LEDREAVRTRELVLTGGMAGYVW--TINGKAF-----------------------D-PDRPDL--- 332
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 434 ytgtppnntMVSRGtkvvvlkykTTVELVLQGTSilgIEAHPIHLHGFNFYVVGQgfgnfNPARDPkhynlvDPVERNTI 513
Cdd:COG2132 333 ---------TVKLG---------ERERWTLVNDT---MMPHPFHLHGHQFQVLSR-----NGKPPP------EGGWKDTV 380
                       490       500       510       520
                ....*....|....*....|....*....|....*....|.
gi 15227037 514 NIPSGGWVAIRFLADN-PGVWLMHCHIEIHLSWGLtMAWVV 553
Cdd:COG2132 381 LVPPGETVRILFRFDNyPGDWMFHCHILEHEDAGM-MGQFE 420
 
Name Accession Description Interval E-value
laccase TIGR03389
laccase, plant; Members of this protein family include the copper-containing enzyme laccase ...
27-573 0e+00

laccase, plant; Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.


Pssm-ID: 274556 [Multi-domain]  Cd Length: 539  Bit Score: 907.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    27 GITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQC 106
Cdd:TIGR03389   1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   107 PIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRATVYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADPQAVVQQALQTG 186
Cdd:TIGR03389  81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   187 AGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLG 266
Cdd:TIGR03389 161 GAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   267 PGQTTNVLLKTKPiYPNaTFYMLARPYFTGQGTIDNTTVAGILQYQHHTKSSKnlsIIKPSLPPINSTSYAANFTKMFRS 346
Cdd:TIGR03389 241 PGQTTNVLLTADQ-SPG-RYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAK---PILPTLPAYNDTAAATNFSNKLRS 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   347 LASSTFPANVPKVVDKQYFFAIGLGTNPCPkNQTCQGPtNTTKFAASINNVSFILPNkTSLLQSYFVGkSKNVFMTDFPT 426
Cdd:TIGR03389 316 LNSAQYPANVPVTIDRRLFFTIGLGLDPCP-NNTCQGP-NGTRFAASMNNISFVMPT-TALLQAHYFG-ISGVFTTDFPA 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   427 APIIPFNYTGTP-PNNTMVSRGTKVVVLKYKTTVELVLQGTSILGIEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLV 505
Cdd:TIGR03389 392 NPPTKFNYTGTNlPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLV 471
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15227037   506 DPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVLDGDLPNQKLLPPPSDFPKC 573
Cdd:TIGR03389 472 DPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539
ascorbase TIGR03388
L-ascorbate oxidase, plant type; Members of this protein family are the copper-containing ...
29-547 6.36e-97

L-ascorbate oxidase, plant type; Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases.


Pssm-ID: 274555 [Multi-domain]  Cd Length: 541  Bit Score: 305.52  E-value: 6.36e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    29 TRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNH-VSNNISIHWHGIRQLRSGWADGPSYVTQCP 107
Cdd:TIGR03388   1 IRHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKlHTEGVVIHWHGIRQIGTPWADGTAGVTQCA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   108 IRMGQSYVYNFTVTgQRGTLWWHAHIQWMR-ATVYGPLIILPKLHQPYPFPKPYkQVPILFGEWFNadpQAVVQQALQTG 186
Cdd:TIGR03388  81 INPGETFIYNFVVD-RPGTYFYHGHYGMQRsAGLYGSLIVDVPDGEKEPFHYDG-EFNLLLSDWWH---KSIHEQEVGLS 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   187 AGP------------------NASDAHTFNGLPGPLYNCSTKDT---YKLMVKPGKTYLLRLIN----AALNdelfFTIA 241
Cdd:TIGR03388 156 SKPmrwigepqsllingrgqfNCSLAAKFSSTNLPQCNLKGNEQcapQILHVEPGKTYRLRIASttalAALN----FAIE 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   242 NHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPiYPNATFYM----LARPYFTGQGTidnttvaGILQYqHHTKS 317
Cdd:TIGR03388 232 GHKLTVVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQ-DPSRNYWIsvgvRGRKPNTPPGL-------TVLNY-YPNSP 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   318 SKNLSIIKPSLPPINSTSYAANFTKMFRSLASSTFPanvPKVVDKQYFFaigLGTnpcpknqtcQGPTNT-TKFAasINN 396
Cdd:TIGR03388 303 SRLPPTPPPVTPAWDDFDRSKAFSLAIKAAMGSPKP---PETSDRRIVL---LNT---------QNKINGyTKWA--INN 365
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   397 VSFILPnktsllQSYFVGKSKNVFMTDFPTAP---IIPFNY--TGTPPN-NTMVSRGtkVVVLKYKTTVELVLQGTSIL- 469
Cdd:TIGR03388 366 VSLTLP------HTPYLGSLKYNLLNAFDQKPppeNYPRDYdiFKPPPNpNTTTGNG--IYRLKFNTTVDVILQNANTLn 437
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   470 --GIEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGL 547
Cdd:TIGR03388 438 gnNSETHPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGM 517
PLN02604 PLN02604
oxidoreductase
9-547 4.03e-86

oxidoreductase


Pssm-ID: 215324 [Multi-domain]  Cd Length: 566  Bit Score: 278.28  E-value: 4.03e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    9 LLVAFLFAIS-YNIDAASAGItRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHV-SNNISIHW 86
Cdd:PLN02604   4 FLALFFLLFSvLNFPAAEARI-RRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLlTENVAIHW 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   87 HGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTgQRGTLWWHAHIQWMR-ATVYGPLIILPKLHQPYPFPKPYKQvPI 165
Cdd:PLN02604  83 HGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVVD-RPGTYLYHAHYGMQReAGLYGSIRVSLPRGKSEPFSYDYDR-SI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  166 LFGEWFNAdpqAVVQQALQTGAGPnasdaHTFNGLPGPL-------YNCSTKDT-----------------YKLMVKPGK 221
Cdd:PLN02604 161 ILTDWYHK---STYEQALGLSSIP-----FDWVGEPQSLliqgkgrYNCSLVSSpylkagvcnatnpecspYVLTVVPGK 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  222 TYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPiYPNATFYM----LARPYFTGQ 297
Cdd:PLN02604 233 TYRLRISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQ-DPSRNYWVttsvVSRNNTTPP 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  298 GTidnttvaGILQY--QHHTKSSknlSIIKPSLPPINSTSYAANFTKMFRSLASSTFPAnvPKVVDKQYFFaigLGTnpc 375
Cdd:PLN02604 312 GL-------AIFNYypNHPRRSP---PTVPPSGPLWNDVEPRLNQSLAIKARHGYIHPP--PLTSDRVIVL---LNT--- 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  376 pknqtcQGPTNTTkFAASINNVSFILPNKtsllqSYFVGKSKNVFMTDFPTAPiiPFNY------TGTPPNNTMVSRGTK 449
Cdd:PLN02604 374 ------QNEVNGY-RRWSVNNVSFNLPHT-----PYLIALKENLTGAFDQTPP--PEGYdfanydIYAKPNNSNATSSDS 439
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  450 VVVLKYKTTVELVLQGTSILGI---EAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFL 526
Cdd:PLN02604 440 IYRLQFNSTVDIILQNANTMNAnnsETHPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFR 519
                        570       580
                 ....*....|....*....|.
gi 15227037  527 ADNPGVWLMHCHIEIHLSWGL 547
Cdd:PLN02604 520 ADNPGVWAFHCHIESHFFMGM 540
PLN02191 PLN02191
L-ascorbate oxidase
2-563 1.20e-85

L-ascorbate oxidase


Pssm-ID: 177843 [Multi-domain]  Cd Length: 574  Bit Score: 277.28  E-value: 1.20e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    2 VTWVLNYLLVAFlfaisyniDAASAGItRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNN 81
Cdd:PLN02191   5 VWWIVTVVAVLT--------HTASAAV-REYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTE 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   82 -ISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTgQRGTLWWHAHIQWMRAT-VYGPLIIL----PKLHQPYP 155
Cdd:PLN02191  76 gLVIHWHGIRQKGSPWADGAAGVTQCAINPGETFTYKFTVE-KPGTHFYHGHYGMQRSAgLYGSLIVDvakgPKERLRYD 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  156 fpkpyKQVPILFGEWFNadpQAVVQQALQTGAGP------------------NASDAHTFNGlPGPLYNCSTKDTYK--- 214
Cdd:PLN02191 155 -----GEFNLLLSDWWH---ESIPSQELGLSSKPmrwigeaqsilingrgqfNCSLAAQFSN-GTELPMCTFKEGDQcap 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  215 --LMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPIyPNATFYMlarp 292
Cdd:PLN02191 226 qtLRVEPNKTYRIRLASTTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQD-PSQNYYI---- 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  293 YFTGQGTIDNTTVA-GILQYQHHTkSSKNLSIIKPSLPPINSTSYAANFTKMFRSLASSTFPanvPKVVDKQYffaIGLG 371
Cdd:PLN02191 301 SVGVRGRKPNTTQAlTILNYVTAP-ASKLPSSPPPVTPRWDDFERSKNFSKKIFSAMGSPSP---PKKYRKRL---ILLN 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  372 TNPCPKNQTcqgptnttkfAASINNVSFILPnKTSLLQSYFVGKSKNVFMTDFPTAPIIPFNYTGTPPN-NTmvSRGTKV 450
Cdd:PLN02191 374 TQNLIDGYT----------KWAINNVSLVTP-ATPYLGSVKYNLKLGFNRKSPPRSYRMDYDIMNPPPFpNT--TTGNGI 440
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  451 VVLKYKTTVELVLQGTSIL-GI--EAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFLA 527
Cdd:PLN02191 441 YVFPFNVTVDVIIQNANVLkGVvsEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVT 520
                        570       580       590
                 ....*....|....*....|....*....|....*....
gi 15227037  528 DNPGVWLMHCHIEIHLSWGLTMAWVV-LD--GDLPNQKL 563
Cdd:PLN02191 521 DNPGVWFFHCHIEPHLHMGMGVVFAEgLNriGKIPDEAL 559
CuRO_3_LCC_plant cd13897
The third cupredoxin domain of the plant laccases; Laccase is a blue multicopper oxidase (MCO) ...
419-556 9.91e-82

The third cupredoxin domain of the plant laccases; Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259964 [Multi-domain]  Cd Length: 139  Bit Score: 252.18  E-value: 9.91e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 419 VFMTDFPTAPIIPFNYTGTPPN-NTMVSRGTKVVVLKYKTTVELVLQGTSILGIEAHPIHLHGFNFYVVGQGFGNFNPAR 497
Cdd:cd13897   1 VYTTDFPDRPPVPFDYTGNAPNeNTPTSRGTKVKVLEYGSTVEIVLQGTSLLAAENHPMHLHGFDFYVVGRGFGNFDPST 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 15227037 498 DPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVLDG 556
Cdd:cd13897  81 DPATFNLVDPPLRNTVGVPRGGWAAIRFVADNPGVWFMHCHFERHTSWGMATVFIVKNG 139
CuRO_2_LCC_plant cd13875
The second cupredoxin domain of the plant laccases; Laccase is a blue multi-copper enzyme that ...
163-311 1.18e-80

The second cupredoxin domain of the plant laccases; Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259943 [Multi-domain]  Cd Length: 148  Bit Score: 249.44  E-value: 1.18e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 163 VPILFGEWFNADPQAVVQQALQTGAGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIAN 242
Cdd:cd13875   1 VPIILGEWWNRDVNDVEDQALLTGGGPNISDAYTINGQPGDLYNCSSKDTFVLTVEPGKTYLLRIINAALNEELFFKIAN 80
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 243 HTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPiyPNATFYMLARPYFTGQG-TIDNTTVAGILQY 311
Cdd:cd13875  81 HTLTVVAVDASYTKPFTTDYILIAPGQTTDVLLTADQ--PPGRYYMAARPYQSAPPvPFDNTTATAILEY 148
CuRO_1_LCC_plant cd13849
The first cupredoxin domain of plant laccases; Laccase is a blue multicopper oxidase (MCO) ...
32-148 1.27e-67

The first cupredoxin domain of plant laccases; Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259918 [Multi-domain]  Cd Length: 117  Bit Score: 214.43  E-value: 1.27e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  32 YQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPIRMG 111
Cdd:cd13849   1 YTFVVQEKNVTRLCSTKSILTVNGQFPGPTIRVHEGDTVVVNVTNRSPYNITIHWHGIRQLRSGWADGPAYITQCPIQPG 80
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 15227037 112 QSYVYNFTVTGQRGTLWWHAHIQWMRATVYGPLIILP 148
Cdd:cd13849  81 QSYTYRFTVTGQEGTLWWHAHISWLRATVYGAFIIRP 117
ascorbOXfungal TIGR03390
L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, ...
36-557 4.63e-54

L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized.


Pssm-ID: 132431 [Multi-domain]  Cd Length: 538  Bit Score: 191.98  E-value: 4.63e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    36 IQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSN-NISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSY 114
Cdd:TIGR03390  15 VTSDNIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDnNVTMHWHGLTQRTAPFSDGTPLASQWPIPPGHFF 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   115 VYNFTVT-GQRGTLWWHAHIQWMRATVYGPLIILPKLHQPYPFPKpykQVPILFGEWFNADPQAVVQQALQTG-AGPNAS 192
Cdd:TIGR03390  95 DYEIKPEpGDAGSYFYHSHVGFQAVTAFGPLIVEDCEPPPYKYDD---ERILLVSDFFSATDEEIEQGLLSTPfTWSGET 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   193 DAHTFNGLPGPL-YNCSTKDTYKLM-----VKPGKTYLLRLINAALNDELFFTIANH-TLTVVEADACYVKPFQTNIVLL 265
Cdd:TIGR03390 172 EAVLLNGKSGNKsFYAQINPSGSCMlpvidVEPGKTYRLRFIGATALSLISLGIEDHeNLTIIEADGSYTKPAKIDHLQL 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   266 GPGQTTNVLLKTKpiyPNATFYMLAR-PYFTGQGTIDNTTVA---GILQYqhhtKSSKNLSIIK-PSLPPINSTSYAANF 340
Cdd:TIGR03390 252 GGGQRYSVLFKAK---TEDELCGGDKrQYFIQFETRDRPKVYrgyAVLRY----RSDKASKLPSvPETPPLPLPNSTYDW 324
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   341 TKMFRSLASSTFPANVPKVVDKQYFFAIGLGTNPCPKNQTcqgptnttkFAASINNVSFI--LPNKTSLLQSYFVGKskn 418
Cdd:TIGR03390 325 LEYELEPLSEENNQDFPTLDEVTRRVVIDAHQNVDPLNGR---------VAWLQNGLSWTesVRQTPYLVDIYENGL--- 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   419 vfmtdfptaPIIPfNYTGTPPNNTMvSRGTKVVVLKYKTTVELVLQGTSIL-----GIEAHPIHLHGFNFYVVGQGFGNF 493
Cdd:TIGR03390 393 ---------PATP-NYTAALANYGF-DPETRAFPAKVGEVLEIVWQNTGSYtgpngGVDTHPFHAHGRHFYDIGGGDGEY 461
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15227037   494 NPARDPKHYNLVDPVERNTINI-----------PSgGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVLDGD 557
Cdd:TIGR03390 462 NATANEAKLENYTPVLRDTTMLyryavkvvpgaPA-GWRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGDAE 535
PLN02168 PLN02168
copper ion binding / pectinesterase
8-533 9.32e-53

copper ion binding / pectinesterase


Pssm-ID: 215113 [Multi-domain]  Cd Length: 545  Bit Score: 188.65  E-value: 9.32e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    8 YLLVAFLFAISYNIDAASAGITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWH 87
Cdd:PLN02168   5 FVEVFVLISLVILELSYAFAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTEPFLMTWN 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   88 GIRQLRSGWADGPSYvTQCPIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRAT-VYGPLIILPKLHQPYPFPKPYKQVPIL 166
Cdd:PLN02168  85 GLQLRKNSWQDGVRG-TNCPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAgGYGAIRIYNPELVPVPFPKPDEEYDIL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  167 FGEWFNADpQAVVQQALQTGAGPNASDAHTFNGlPGPlyncstKDTYkLMVKPGKTYLLRLINAALNDELFFTIANHTLT 246
Cdd:PLN02168 164 IGDWFYAD-HTVMRASLDNGHSLPNPDGILFNG-RGP------EETF-FAFEPGKTYRLRISNVGLKTCLNFRIQDHDML 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  247 VVEADACYVKPFQTNIVLLGPGQTTNVLL--KTKPIYPNATFYMLARPYFTGQ--GTIdnttvaGILQYQHhtkssknlS 322
Cdd:PLN02168 235 LVETEGTYVQKRVYSSLDIHVGQSYSVLVtaKTDPVGIYRSYYIVATARFTDAylGGV------ALIRYPN--------S 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  323 IIKPS--LPPinstsyaanftkmfrSLASSTFPANVPKVVDKQYFFAIGlGTNPCPKNQTCQGPTNTT------------ 388
Cdd:PLN02168 301 PLDPVgpLPL---------------APALHDYFSSVEQALSIRMDLNVG-AARSNPQGSYHYGRINVTrtiilhndvmls 364
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  389 --KFAASINNVSFILPNKTSLLQSYFVgksknvfMTDfptaPIIPFNYTGTPPNNTmVSRGTKVVVLKYKTTVELVLQgT 466
Cdd:PLN02168 365 sgKLRYTINGVSFVYPGTPLKLVDHFQ-------LND----TIIPGMFPVYPSNKT-PTLGTSVVDIHYKDFYHIVFQ-N 431
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15227037  467 SILGIEAHpiHLHGFNFYVVGQGFGNFNPARDPKhYNLVDPVERNTINIPSGGWVAIRFLADNPGVW 533
Cdd:PLN02168 432 PLFSLESY--HIDGYNFFVVGYGFGAWSESKKAG-YNLVDAVSRSTVQVYPYSWTAILIAMDNQGMW 495
Cu-oxidase_3 pfam07732
Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are ...
35-149 9.54e-51

Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are not recognized by the pfam00394 model.


Pssm-ID: 462247 [Multi-domain]  Cd Length: 119  Bit Score: 170.12  E-value: 9.54e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    35 DIQLKNITRLCKTKTIV-TVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPIRMGQS 113
Cdd:pfam07732   1 TVTYGTVSPLGGTRQAViGVNGQFPGPTIRVREGDTVVVNVTNNLDEPTSIHWHGLQQRGTPWMDGVPGVTQCPIPPGQS 80
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 15227037   114 YVYNFTVTGQRGTLWWHAHIQWMR-ATVYGPLIILPK 149
Cdd:pfam07732  81 FTYRFQVKQQAGTYWYHSHTSGQQaAGLAGAIIIEDR 117
Cu-oxidase_2 pfam07731
Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are ...
423-557 2.23e-47

Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are not recognized by the pfam00394 model.


Pssm-ID: 462246 [Multi-domain]  Cd Length: 138  Bit Score: 162.22  E-value: 2.23e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   423 DFPTAPIIPFNYTGT-------PPNNTMVSRGTKVVVLKYKTTVELVLQGTSILgieAHPIHLHGFNFYVVGQGFGNfNP 495
Cdd:pfam07731   1 DTPPKLPTLLQITSGnfrrndwAINGLLFPPNTNVITLPYGTVVEWVLQNTTTG---VHPFHLHGHSFQVLGRGGGP-WP 76
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15227037   496 ARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVLDGD 557
Cdd:pfam07731  77 EEDPKTYNLVDPVRRDTVQVPPGGWVAIRFRADNPGVWLFHCHILWHLDQGMMGQFVVRPGD 138
PLN02991 PLN02991
oxidoreductase
9-539 2.90e-46

oxidoreductase


Pssm-ID: 215536 [Multi-domain]  Cd Length: 543  Bit Score: 170.58  E-value: 2.90e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    9 LLVAFLFAISYnidAASAGITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHG 88
Cdd:PLN02991  11 MILGLLFLISF---VAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHLDEPFLISWSG 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   89 IRQLRSGWADGpSYVTQCPIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRAT-VYGPLIILPKLHQPYPFPKPYKQVPILF 167
Cdd:PLN02991  88 IRNWRNSYQDG-VYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAgGFGAIRISSRPLIPVPFPAPADDYTVLI 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  168 GEWFNADPQAVVQQALQTGAGPnasdahtfngLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTV 247
Cdd:PLN02991 167 GDWYKTNHKDLRAQLDNGGKLP----------LPDGILINGRGSGATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKL 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  248 VEADACYV--KPFQTNIVLLgpGQTTNVLLKTKPiyPNATFYMLARPYFTGQGTIdnttVAGILqyqHHTKSSKNLSIIK 325
Cdd:PLN02991 237 VEVEGTHTiqTPFSSLDVHV--GQSYSVLITADQ--PAKDYYIVVSSRFTSKILI----TTGVL---HYSNSAGPVSGPI 305
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  326 PSLPpiNSTSYAANFTKMFRS-LASStfpanvpkvvdkqyffaiglGTNPCPKNQTCQGPTNTTKFAASINNVSFILPNk 404
Cdd:PLN02991 306 PDGP--IQLSWSFDQARAIKTnLTAS--------------------GPRPNPQGSYHYGKINITRTIRLANSAGNIEGK- 362
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  405 tsllQSYFVgKSKNVFMTDFPTAPIIPFNYTGT--------PPNNTMVSRGTKVVVLKYKTTVELVLQGTSILgieAHPI 476
Cdd:PLN02991 363 ----QRYAV-NSASFYPADTPLKLADYFKIAGVynpgsipdQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDI---VQTW 434
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15227037  477 HLHGFNFYVVGQGFGNFNPArDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHI 539
Cdd:PLN02991 435 HLDGYSFYVVGMELGKWSAA-SRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSEL 496
Cu-oxidase pfam00394
Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of ...
161-313 2.79e-41

Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain.


Pssm-ID: 395317 [Multi-domain]  Cd Length: 146  Bit Score: 145.92  E-value: 2.79e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   161 KQVPILFGEWFNADPQAVVQQALQTGAG----PNASDAHTFNGLPGplyncstKDTYKLMVKPGKTYLLRLINAALNDEL 236
Cdd:pfam00394   1 EDYVITLSDWYHKDAKDLEKELLASGKAptdfPPVPDAVLINGKDG-------ASLATLTVTPGKTYRLRIINVALDDSL 73
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15227037   237 FFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPiyPNATFYMLARPyftGQGTIDNTTVAGILQYQH 313
Cdd:pfam00394  74 NFSIEGHKMTVVEVDGVYVNPFTVDSLDIFPGQRYSVLVTANQ--DPGNYWIVASP---NIPAFDNGTAAAILRYSG 145
CuRO_1_LCC_like cd04206
Cupredoxin domain 1 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
30-146 2.93e-40

Cupredoxin domain 1 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) in this family contain three cupredoxin domains. They are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. Also included in this family are cupredoxin domains 1, 3, and 5 of the 6-domain MCO ceruloplasmin and similar proteins.


Pssm-ID: 259869 [Multi-domain]  Cd Length: 120  Bit Score: 142.04  E-value: 2.93e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  30 RHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSN-NISIHWHGIRQLRSGWADGPSYVTQCPI 108
Cdd:cd04206   1 REYELTITETTVNPDGVLRQVITVNGQFPGPTIRVKEGDTVEVTVTNNLPNePTSIHWHGLRQPGTNDGDGVAGLTQCPI 80
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 15227037 109 RMGQSYVYNFTVTGQRGTLWWHAHIQW-MRATVYGPLII 146
Cdd:cd04206  81 PPGESFTYRFTVDDQAGTFWYHSHVGGqRADGLYGPLIV 119
PLN02354 PLN02354
copper ion binding / oxidoreductase
31-533 1.30e-39

copper ion binding / oxidoreductase


Pssm-ID: 177987 [Multi-domain]  Cd Length: 552  Bit Score: 152.25  E-value: 1.30e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   31 HYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADG-PSyvTQCPIR 109
Cdd:PLN02354  29 FFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNLDEPFLLTWSGIQQRKNSWQDGvPG--TNCPIP 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  110 MGQSYVYNFTVTGQRGTLWWHAHIQWMRAT-VYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADpQAVVQQALQTGAG 188
Cdd:PLN02354 107 PGTNFTYHFQPKDQIGSYFYYPSTGMHRAAgGFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKS-HTALKKFLDSGRT 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  189 PNASDAHTFNGLPGPLyncSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPG 268
Cdd:PLN02354 186 LGRPDGVLINGKSGKG---DGKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVHVG 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  269 QTTNVLLKT--KPiypnATFYMLARPYFTGQgtidNTTVAGILQYqhhTKSSKNLSiikPSLPPINST-SYAANFTKMFR 345
Cdd:PLN02354 263 QCFSVLVTAnqAP----KDYYMVASTRFLKK----VLTTTGIIRY---EGGKGPAS---PELPEAPVGwAWSLNQFRSFR 328
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  346 -SLASStfpanvpkvvdkqyffaiglGTNPCPKNQTCQGPTNTT--------------KFAASINNVSFILPNKTSLLQS 410
Cdd:PLN02354 329 wNLTAS--------------------AARPNPQGSYHYGKINITrtiklvnsaskvdgKLRYALNGVSHVDPETPLKLAE 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  411 YFvGKSKNVF----MTDFPTAPIIPfnyTGTPPNntmvsrgtkVVVLKYKTTVELVLQG--TSIlgieaHPIHLHGFNFY 484
Cdd:PLN02354 389 YF-GVADKVFkydtIKDNPPAKITK---IKIQPN---------VLNITFRTFVEIIFENheKSM-----QSWHLDGYSFF 450
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*....
gi 15227037  485 VVGQGFGNFNPARDpKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVW 533
Cdd:PLN02354 451 AVAVEPGTWTPEKR-KNYNLLDAVSRHTVQVYPKSWAAILLTFDNAGMW 498
PLN02792 PLN02792
oxidoreductase
21-533 1.31e-39

oxidoreductase


Pssm-ID: 178389 [Multi-domain]  Cd Length: 536  Bit Score: 152.06  E-value: 1.31e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   21 IDAASAGITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGp 100
Cdd:PLN02792   8 ISFVKADDTLFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQDG- 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  101 SYVTQCPIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRAT-VYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADPQAvV 179
Cdd:PLN02792  87 VYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAgGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTT-L 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  180 QQALQTGAG-PNASDAHTFNGLpgplyncSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPF 258
Cdd:PLN02792 166 KKILDGGRKlPLMPDGVMINGQ-------GVSYVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQS 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  259 QTNIVLLGPGQTTNVLLKTKPiyPNATFYMLARPYFTGQGTIDNTTVagilqyqhHTKSSKNLSIIKPSLPPINSTSYAA 338
Cdd:PLN02792 239 MYTSLDIHVGQTYSVLVTMDQ--PPQNYSIVVSTRFIAAKVLVSSTL--------HYSNSKGHKIIHARQPDPDDLEWSI 308
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  339 NFTKMFRSLASSTFPANVPKvvDKQYFFAIGLGTNPCPKNQTCQgptNTTKFAASINNVSFILPNKTSLLQSYFvgKSKN 418
Cdd:PLN02792 309 KQAQSIRTNLTASGPRTNPQ--GSYHYGKMKISRTLILESSAAL---VKRKQRYAINGVSFVPSDTPLKLADHF--KIKG 381
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  419 VFMtdfptapiipfnyTGTPPNNTMVSRG----TKVVVLKYKTTVELVLQGTSILgieAHPIHLHGFNFYVVGQGFGNFN 494
Cdd:PLN02792 382 VFK-------------VGSIPDKPRRGGGmrldTSVMGAHHNAFLEIIFQNREKI---VQSYHLDGYNFWVVGINKGIWS 445
                        490       500       510
                 ....*....|....*....|....*....|....*....
gi 15227037  495 PARDpKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVW 533
Cdd:PLN02792 446 RASR-REYNLKDAISRSTTQVYPESWTAVYVALDNVGMW 483
PLN00044 PLN00044
multi-copper oxidase-related protein; Provisional
46-533 4.97e-39

multi-copper oxidase-related protein; Provisional


Pssm-ID: 165622 [Multi-domain]  Cd Length: 596  Bit Score: 150.97  E-value: 4.97e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   46 KTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYvTQCPIRMGQSYVYNFTVTGQRG 125
Cdd:PLN00044  46 KKQEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHGVQQRKSAWQDGVGG-TNCAIPAGWNWTYQFQVKDQVG 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  126 TLWWHAHIQWMRAT-VYGPLIILPKLHQPYPFPKP-YKQVPILFGEWFNADPQAvVQQALQTGAGPNASDAHTFNGLPGP 203
Cdd:PLN00044 125 SFFYAPSTALHRAAgGYGAITINNRDVIPIPFGFPdGGDITLFIADWYARDHRA-LRRALDAGDLLGAPDGVLINAFGPY 203
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  204 LYNCSTKD---TY-KLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLkTKP 279
Cdd:PLN00044 204 QYNDSLVPpgiTYeRINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLL-TMD 282
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  280 IYPNATFYMLARPYFTGQGTIDNTTVAGILqyqHHTKSSKNLSIIKPSLPPIN-STSYAANFTKMFRSLASSTfpanvpk 358
Cdd:PLN00044 283 QNASTDYYVVASARFVDAAVVDKLTGVAIL---HYSNSQGPASGPLPDAPDDQyDTAFSINQARSIRWNVTAS------- 352
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  359 vvdkqyffaiglGTNPCPKNQTCQGPTNTT---------------KFAASINNVSFILPNKTSLLQSYFvgKSKNVFMTD 423
Cdd:PLN00044 353 ------------GARPNPQGSFHYGDITVTdvyllqsmapelidgKLRATLNEISYIAPSTPLMLAQIF--NVPGVFKLD 418
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  424 FPTAPIipfnyTGTPPNNTMVSRGTkvvvlkYKTTVELVLQGTSilgIEAHPIHLHGFNFYVVGQGFGNFNpARDPKHYN 503
Cdd:PLN00044 419 FPNHPM-----NRLPKLDTSIINGT------YKGFMEIIFQNNA---TNVQSYHLDGYAFFVVGMDYGLWT-DNSRGTYN 483
                        490       500       510
                 ....*....|....*....|....*....|
gi 15227037  504 LVDPVERNTINIPSGGWVAIRFLADNPGVW 533
Cdd:PLN00044 484 KWDGVARSTIQVFPGAWTAILVFLDNAGIW 513
PLN02835 PLN02835
oxidoreductase
30-539 6.40e-39

oxidoreductase


Pssm-ID: 178429 [Multi-domain]  Cd Length: 539  Bit Score: 150.12  E-value: 6.40e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   30 RHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGpSYVTQCPIR 109
Cdd:PLN02835  30 KYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIP 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  110 MGQSYVYNFTVTGQRGTLWWHAHIQWMRAT-VYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADpQAVVQQALQTGag 188
Cdd:PLN02835 109 PNSNYTYKFQTKDQIGTFTYFPSTLFHKAAgGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTS-HKTLQQRLDSG-- 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  189 pnasdahtfNGLPGP---LYNCSTKDTYKlmVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLL 265
Cdd:PLN02835 186 ---------KVLPFPdgvLINGQTQSTFS--GDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDV 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  266 GPGQTTNVLLKTKPiyPNATFYMLARPYFTGQgtidNTTVAGILQYQH-HTKSSKNLsiikPSLPP-------INSTSYA 337
Cdd:PLN02835 255 HVGQSVAVLVTLNQ--SPKDYYIVASTRFTRQ----ILTATAVLHYSNsRTPASGPL----PALPSgelhwsmRQARTYR 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  338 ANFTkmfrslASSTFPanvpkvvDKQYFFAIGLGTnpcpknqtcqgPTNTTKFAAS-----------INNVSFILPNKTS 406
Cdd:PLN02835 325 WNLT------ASAARP-------NPQGSFHYGKIT-----------PTKTIVLANSaplingkqryaVNGVSYVNSDTPL 380
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  407 LLQSYFvgKSKNVFMTdfptapiipfNYTGTPPNNTMVSRGTKVVVLKYKTTVELVLQGTSilgIEAHPIHLHGFNFYVV 486
Cdd:PLN02835 381 KLADYF--GIPGVFSV----------NSIQSLPSGGPAFVATSVMQTSLHDFLEVVFQNNE---KTMQSWHLDGYDFWVV 445
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|...
gi 15227037  487 GQGFGNFNPARDpKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHI 539
Cdd:PLN02835 446 GYGSGQWTPAKR-SLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAI 497
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
46-553 8.98e-38

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 144.69  E-value: 8.98e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  46 KTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRqLRSGwADGpsyVTQCPIRMGQSYVYNFTVTGQRG 125
Cdd:COG2132  31 KPTTVWGYNGQYPGPTIRVREGDRVRVRVTNRLPEPTTVHWHGLR-VPNA-MDG---VPGDPIAPGETFTYEFPVPQPAG 105
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 126 TLWWHAHIqwMRATV-------YGPLIILPKLHQpypFPKPYKQVPILFGEW-FNADPQAVVQQALQTGAGPnaSDAHTF 197
Cdd:COG2132 106 TYWYHPHT--HGSTAeqvyrglAGALIVEDPEED---LPRYDRDIPLVLQDWrLDDDGQLLYPMDAAMGGRL--GDTLLV 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 198 NGLPGPLYNcstkdtyklmVKPGKTYLLRLINAALNDelFFTIA---NHTLTVVEADACYV-KPFQTNIVLLGPGQTTNV 273
Cdd:COG2132 179 NGRPNPTLE----------VRPGERVRLRLLNASNAR--IYRLAlsdGRPFTVIATDGGLLpAPVEVDELLLAPGERADV 246
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 274 LLKTKPiyPNATFYMLARPYFTGQGtidnttvagilqyqhhtkssKNLSIIKPSlppinstsyaanftkmfRSLASSTFP 353
Cdd:COG2132 247 LVDFSA--DPGEEVTLANPFEGRSG--------------------RALLTLRVT-----------------GAAASAPLP 287
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 354 ANVPKVVDkqyffaIGLGTNPCPKNQTCQGPTNTTKFaaSINNVSFilpnktsllqsyfvgksknvfmtDfPTAPIIpfn 433
Cdd:COG2132 288 ANLAPLPD------LEDREAVRTRELVLTGGMAGYVW--TINGKAF-----------------------D-PDRPDL--- 332
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 434 ytgtppnntMVSRGtkvvvlkykTTVELVLQGTSilgIEAHPIHLHGFNFYVVGQgfgnfNPARDPkhynlvDPVERNTI 513
Cdd:COG2132 333 ---------TVKLG---------ERERWTLVNDT---MMPHPFHLHGHQFQVLSR-----NGKPPP------EGGWKDTV 380
                       490       500       510       520
                ....*....|....*....|....*....|....*....|.
gi 15227037 514 NIPSGGWVAIRFLADN-PGVWLMHCHIEIHLSWGLtMAWVV 553
Cdd:COG2132 381 LVPPGETVRILFRFDNyPGDWMFHCHILEHEDAGM-MGQFE 420
CuRO_1_Diphenol_Ox cd13857
The first cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to ...
30-146 4.53e-36

The first cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to the laccase family. It catalyzes the initial steps in melanin biosynthesis from diphenols. Melanin is one of the virulence factors of infectious fungi. In the pathogenesis of C. neoformans, melanin pigments have been shown to protect the fungal cells from oxidative and microbicidal activities of host defense systems. Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259926 [Multi-domain]  Cd Length: 119  Bit Score: 130.84  E-value: 4.53e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  30 RHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPIR 109
Cdd:cd13857   1 REYNFTISEITGAPDGFVRPMLVINGQFPGPLIEANQGDRIVVHVTNELDEPTSIHWHGLFQNGTNWMDGTAGITQCPIP 80
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 15227037 110 MGQSYVYNFTVTGQRGTLWWHAHIQWMRAT-VYGPLII 146
Cdd:cd13857  81 PGGSFTYNFTVDGQYGTYWYHSHYSTQYADgLVGPLIV 118
CuRO_3_tcLLC2_insect_like cd13905
The third cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium castaneum; ...
393-567 4.47e-35

The third cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium castaneum; This multicopper oxidase (MCO) family includes the majority of insect laccases. One member of the family is laccase 2 from Tribolium castaneum. Laccase 2 is required for beetle cuticle tanning. Laccase (polyphenol oxidase EC 1.10.3.2) is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic - notably phenolic and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi, plants and insects. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259972 [Multi-domain]  Cd Length: 174  Bit Score: 130.11  E-value: 4.47e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 393 SINNVSFILPnkTSLLQSYFVGKSKNVFMTDFptapiipfNYTGTPPNNTmvSRGTKVVVLKYKTTVELVLQGTSILGIE 472
Cdd:cd13905   1 SINGISFVFP--SSPLLSQPEDLSDSSSCDFC--------NVPSKCCTEP--CECTHVIKLPLNSVVEIVLINEGPGPGL 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 473 AHPIHLHGFNFYVVGQGFGNFNPA----------------RDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMH 536
Cdd:cd13905  69 SHPFHLHGHSFYVLGMGFPGYNSTtgeilsqnwnnklldrGGLPGRNLVNPPLKDTVVVPNGGYVVIRFRADNPGYWLLH 148
                       170       180       190
                ....*....|....*....|....*....|.
gi 15227037 537 CHIEIHLSWGltMAWVVLDGDlpnQKLLPPP 567
Cdd:cd13905 149 CHIEFHLLEG--MALVLKVGE---PSDPPPP 174
CuRO_1_tcLCC2_insect_like cd13858
The first cupredoxin domain of insect laccases similar to laccase 2 in Tribolium castaneum; ...
48-147 1.60e-34

The first cupredoxin domain of insect laccases similar to laccase 2 in Tribolium castaneum; This multicopper oxidase (MCO) family includes the majority of insect laccases. One member of the family is laccase 2 from Tribolium castaneum. Laccase 2 is required for beetle cuticle tanning. Laccase (polyphenol oxidase EC 1.10.3.2) is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic - notably phenolic and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi, plants and insects. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259927 [Multi-domain]  Cd Length: 105  Bit Score: 126.11  E-value: 1.60e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  48 KTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNN-ISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTgQRGT 126
Cdd:cd13858   5 RPVITVNGQLPGPSIEVCEGDTVVVDVKNRLPGEsTTIHWHGIHQRGTPYMDGVPMVTQCPILPGQTFRYKFKAD-PAGT 83
                        90       100
                ....*....|....*....|..
gi 15227037 127 LWWHAHIQWMRA-TVYGPLIIL 147
Cdd:cd13858  84 HWYHSHSGTQRAdGLFGALIVR 105
CuRO_1_Tv-LCC_like cd13856
The first cupredoxin domain of fungal laccases similar to Tv-LCC from Trametes versicolor; ...
31-146 5.46e-34

The first cupredoxin domain of fungal laccases similar to Tv-LCC from Trametes versicolor; This subfamily of fungal laccases includes Tv-LCC from Trametes versicolor and Rs-LCC2 from plant pathogenic fungus Rhizoctonia solani. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259925 [Multi-domain]  Cd Length: 125  Bit Score: 125.14  E-value: 5.46e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  31 HYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNN-----ISIHWHGIRQLRSGWADGPSYVTQ 105
Cdd:cd13856   2 TYTLNIVNTRLAPDGFERSAVLANGQFPGPLITANKGDTFRITVVNQLTDPtmrrsTSIHWHGIFQHGTNYADGPAFVTQ 81
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 15227037 106 CPIRMGQSYVYNFTVTGQRGTLWWHAHIqwmrATVY-----GPLII 146
Cdd:cd13856  82 CPIAPNHSFTYDFTAGDQAGTFWYHSHL----STQYcdglrGPLVI 123
copper_res_A TIGR01480
copper-resistance protein, CopA family; This model represents the CopA copper resistance ...
51-547 2.95e-32

copper-resistance protein, CopA family; This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273649 [Multi-domain]  Cd Length: 587  Bit Score: 131.16  E-value: 2.95e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037    51 VTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIrqLRSGWADGPSYVTQCPIRMGQSYVYNFTVTgQRGTLWWH 130
Cdd:TIGR01480  67 ITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGI--LLPFQMDGVPGVSFAGIAPGETFTYRFPVR-QSGTYWYH 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   131 AH--IQWMrATVYGPLIILPKLHQPYPFPKPYKqvpILFGEWFNADPQAVVQQaLQTGAGPNASDAHTFNGLPGPLYNCS 208
Cdd:TIGR01480 144 SHsgFQEQ-AGLYGPLIIDPAEPDPVRADREHV---VLLSDWTDLDPAALFRK-LKVMAGHDNYYKRTVADFFRDVRNDG 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   209 TKDTYK-------------------------LM------------VKPGKTYLLRLINAALNDELFFTIANHTLTVVEAD 251
Cdd:TIGR01480 219 LKQTLAdrkmwgqmrmtptdladvngstytyLMngttpagnwtglFRPGEKVRLRFINGSAMTYFDVRIPGLKLTVVAVD 298
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   252 ACYVKPFQTNIVLLGPGQTTNVLLKTK-----PIYPNA---TFYM---LA-RPYFTGQ---------GTIDNTTVAGILQ 310
Cdd:TIGR01480 299 GQYVHPVSVDEFRIAPAETFDVIVEPTgddafTIFAQDsdrTGYArgtLAvRLGLTAPvpaldprplLTMKDMGMGGMHH 378
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   311 YQHHTKSSKnLSIIKPSLPPINSTSYAANFTKMfRSLASSTFPANVPK--VVDKQYFFAIGLGTNPcpknqtCQGPTNTT 388
Cdd:TIGR01480 379 GMDHSKMSM-GGMPGMDMSMRAQSNAPMDHSQM-AMDASPKHPASEPLnpLVDMIVDMPMDRMDDP------GIGLRDNG 450
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   389 KFAASINNVSFILPNKTSL-----LQSYFVGKSKNvFMTDFPTapiIPFNyTGTPpnntmvsrgtkvVVLKYKTTVELVL 463
Cdd:TIGR01480 451 RRVLTYADLHSLFPPPDGRapgreIELHLTGNMER-FAWSFDG---EAFG-LKTP------------LRFNYGERLRVVL 513
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   464 QGTSILgieAHPIHLHGFNFYVVGQGfGNFNPardpkhynlvdpvERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHL 543
Cdd:TIGR01480 514 VNDTMM---AHPIHLHGMWSELEDGQ-GEFQV-------------RKHTVDVPPGGKRSFRVTADALGRWAYHCHMLLHM 576

                  ....
gi 15227037   544 SWGL 547
Cdd:TIGR01480 577 EAGM 580
CuRO_1_AAO cd13845
The first cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the ...
30-148 5.40e-32

The first cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259914 [Multi-domain]  Cd Length: 120  Bit Score: 119.47  E-value: 5.40e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  30 RHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVS-NNISIHWHGIRQLRSGWADGPSYVTQCPI 108
Cdd:cd13845   1 RHYKWKVEYMFWAPDCVEKLVIGINGQFPGPTIRATAGDTIVVELENKLPtEGVAIHWHGIRQRGTPWADGTASVSQCPI 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 15227037 109 RMGQSYVYNFTVTgQRGTLWWHAHIQWMR-ATVYGPLIILP 148
Cdd:cd13845  81 NPGETFTYQFVVD-RPGTYFYHGHYGMQRsAGLYGSLIVDP 120
CuRO_1_MaLCC_like cd13854
The first cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus ...
27-146 9.56e-32

The first cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces; The subfamily of fungal laccases includes Ma-LCC and similar proteins. Ma-LCC is a multicopper oxidase (MCO) from Melanocarpus albomyces. Its crystal structure contains all four coppers at the mono- and trinuclear copper centers. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259923 [Multi-domain]  Cd Length: 122  Bit Score: 118.88  E-value: 9.56e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  27 GITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNN-ISIHWHGIRQLRSGWADGPSYVTQ 105
Cdd:cd13854   1 GVTRKYTLTITNSTLAPDGVEKEVMLINGQYPGPLIEANWGDTIEVTVINKLQDNgTSIHWHGIRQLNTNWQDGVPGVTE 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 15227037 106 CPIRMGQSYVYNFTVTgQRGTLWWHAH--IQWmRATVYGPLII 146
Cdd:cd13854  81 CPIAPGDTRTYRFRAT-QYGTSWYHSHysAQY-GDGVVGPIVI 121
CuRO_3_LCC_like cd04207
Cupredoxin domain 3 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
447-552 5.29e-31

Cupredoxin domain 3 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) in this family contain three cupredoxin domains. They are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. Also included in this family are cupredoxin domains 2, 4, and 6 of the 6-domain MCO ceruloplasmin and similar proteins.


Pssm-ID: 259870 [Multi-domain]  Cd Length: 132  Bit Score: 117.18  E-value: 5.29e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 447 GTKVVVLKYKTTVELVLQGTSILGIEaHPIHLHGFNFYVVGQGFGNFNPARdpkhyNLVDPVERNTINIPSGGWVAIRFL 526
Cdd:cd04207  33 NTDIFSVEAGDVVEIVLINAGNHDMQ-HPFHLHGHSFWVLGSGGGPFDAPL-----NLTNPPWRDTVLVPPGGWVVIRFK 106
                        90       100
                ....*....|....*....|....*.
gi 15227037 527 ADNPGVWLMHCHIEIHLSWGLTMAWV 552
Cdd:cd04207 107 ADNPGVWMLHCHILEHEDAGMMTVFE 132
CuRO_3_AAO cd13893
The third cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the ...
450-549 1.05e-29

The third cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259960 [Multi-domain]  Cd Length: 155  Bit Score: 114.44  E-value: 1.05e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 450 VVVLKYKTTVELVLQGTSIL---GIEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFL 526
Cdd:cd13893  40 VYPFKGGDVVDVILQNANTNtrnASEQHPWHLHGHDFWVLGYGLGGFDPAADPSSLNLVNPPMRNTVTIFPYGWTALRFK 119
                        90       100
                ....*....|....*....|...
gi 15227037 527 ADNPGVWLMHCHIEIHLSWGLTM 549
Cdd:cd13893 120 ADNPGVWAFHCHIEWHFHMGMGV 142
CuRO_3_MCO_like_4 cd13910
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
458-553 3.47e-28

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259977 [Multi-domain]  Cd Length: 166  Bit Score: 110.46  E-value: 3.47e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 458 TVELVLQGtsiLGIEAHPIHLHGFNFYVVGQGFGNFN----PARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVW 533
Cdd:cd13910  70 VVDLVINN---LDDGDHPFHLHGHKFWVLGSGDGRYGgggyTAPDGTSLNTTNPLRRDTVSVPGFGWAVLRFVADNPGLW 146
                        90       100
                ....*....|....*....|
gi 15227037 534 LMHCHIEIHLSWGLTMAWVV 553
Cdd:cd13910 147 AFHCHILWHMAAGMLMQFAV 166
CuRO_1_Fet3p cd13851
The first Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase ...
46-132 9.98e-28

The first Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase reaction, which couples the oxidation of Fe(II) to Fe(III) and a four-electron reduction of molecular oxygen to water. Fet3p is a type I membrane protein with the amino-terminal oxidase domain in the exocellular space and the carboxyl terminus in the cytoplasm. The periplamic produced Fe(III) is transferred to the permease Ftr1p for import into the cytosol. The four copper ions are inserted post-translationally and are essential for catalytic activity, thus linking copper and iron homeostasis. Like other related multicopper oxidases (MCOs), Fet3p is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259920 [Multi-domain]  Cd Length: 121  Bit Score: 107.74  E-value: 9.98e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  46 KTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSN-NISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTGQR 124
Cdd:cd13851  18 FERRVIGINGQWPPPPIEVNKGDTVVIHATNSLGDqPTSLHFHGLFQNGTNYMDGPVGVTQCPIPPGQSFTYEFTVDTQV 97

                ....*...
gi 15227037 125 GTLWWHAH 132
Cdd:cd13851  98 GTYWYHSH 105
CuRO_1_Abr2_like cd13850
The first cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus ...
51-146 1.04e-27

The first cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus fumigatus; Abr2 is involved in conidial pigment biosynthesis in Aspergillus fumigatus. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259919 [Multi-domain]  Cd Length: 117  Bit Score: 107.38  E-value: 1.04e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  51 VTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTGQRGTLWWH 130
Cdd:cd13850  20 ILINGQFPGPPIILDEGDEVEILVTNNLPVNTTIHFHGILQRGTPWSDGVPGVTQWPIQPGGSFTYRWKAEDQYGLYWYH 99
                        90
                ....*....|....*..
gi 15227037 131 AHI-QWMRATVYGPLII 146
Cdd:cd13850 100 SHYrGYYMDGLYGPIYI 116
CuRO_3_MaLCC_like cd13901
The third cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus ...
457-549 1.81e-27

The third cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces; The subfamily of fungal laccases includes Ma-LCC and similar proteins. Ma-LCC is a multicopper oxidase (MCO) from Melanocarpus albomyces. Its crystal structure contains all four coppers at the mono- and trinuclear copper centers. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259968 [Multi-domain]  Cd Length: 157  Bit Score: 108.08  E-value: 1.81e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 457 TTVELVLQGTSILgieAHPIHLHGFNFYVVGQGFGNFNPARDPkhYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMH 536
Cdd:cd13901  67 KWVYIVIQNNSPL---PHPIHLHGHDFYILAQGTGTFDDDGTI--LNLNNPPRRDVAMLPAGGYLVIAFKTDNPGAWLMH 141
                        90
                ....*....|...
gi 15227037 537 CHIEIHLSWGLTM 549
Cdd:cd13901 142 CHIAWHASGGLAL 154
CuRO_3_Abr2_like cd13898
The third cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus ...
414-556 5.81e-26

The third cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus fumigatus; Abr2 is involved in conidial pigment biosynthesis in Aspergillus fumigatus. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259965 [Multi-domain]  Cd Length: 164  Bit Score: 104.26  E-value: 5.81e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 414 GKSKNVFMTDFPTAPIIPFNYTGTPPNNTMVSrgtkvvvLKYKTTVELVLQgTSILGIEAHPIHLHGFNFYVVGQGFGNF 493
Cdd:cd13898  21 GTELYPLDEEAYPPLLFLPDPATALDSALTIS-------TKNGTWVDLIFQ-VTGPPQPPHPIHKHGNKAFVIGTGTGPF 92
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15227037 494 N-------PARDPKHYNLVDPVERNTINIP----SGGWVAIRFLADNPGVWLMHCHIEIHLSWGltMAWVVLDG 556
Cdd:cd13898  93 NwssvaeaAEAAPENFNLVNPPLRDTFTTPpsteGPSWLVIRYHVVNPGAWLLHCHIQSHLAGG--MAVVLLDG 164
CuRO_3_Fet3p cd13899
The third Cupredoxin domain of multicopper oxidase Fet3p; Fet3p catalyzes the ferroxidase ...
447-548 2.98e-25

The third Cupredoxin domain of multicopper oxidase Fet3p; Fet3p catalyzes the ferroxidase reaction, which couples the oxidation of Fe(II) to Fe(III) with the four-electron reduction of molecular oxygen to water. Fet3p is a type I membrane protein with the amino-terminal oxidase domain in the extracellular space and the carboxyl terminus in the cytoplasm. The periplasmic produced Fe(III) is transferred to the permease Ftr1p for import into the cytosol. The four copper ions are inserted post-translationally and are essential for catalytic activity, thus linking copper and iron homeostasis. Like other related multicopper oxidases (MCOs), Fet3p is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259966 [Multi-domain]  Cd Length: 160  Bit Score: 101.95  E-value: 2.98e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 447 GTKVVVLKYKTTVELVLQ----GTsilgieaHPIHLHGFNFYVVGQGFGNFNPARDPKHY-NLVDPVERNTINIPSGGWV 521
Cdd:cd13899  54 QTNAFVLNHGEVVELVVNnwdaGK-------HPFHLHGHKFQVVQRSPDVASDDPNPPINeFPENPMRRDTVMVPPGGSV 126
                        90       100
                ....*....|....*....|....*..
gi 15227037 522 AIRFLADNPGVWLMHCHIEIHLSWGLT 548
Cdd:cd13899 127 VIRFRADNPGVWFFHCHIEWHLEAGLA 153
CuRO_3_Tv-LCC_like cd13903
The third cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes Versicolor; ...
386-547 4.95e-25

The third cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes Versicolor; This subfamily of fungal laccases includes Tv-LCC from Trametes versicolor and Rs-LCC2 from plant pathogenic fungus Rhizoctonia solani. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259970 [Multi-domain]  Cd Length: 147  Bit Score: 100.82  E-value: 4.95e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 386 NTTKFAASINNVSFILPNKTSLLQSYfvgkSKNVFMTDFptapiipfnytgTPPNNTmvsrgtkvVVLKYKTTVELVLQG 465
Cdd:cd13903  11 NGTTGLFTINGVSYVSPTVPVLLQIL----SGATSAEDL------------LPTEST--------IILPRNKVVEITIPG 66
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 466 TSIlgIEAHPIHLHGFNFYVVgQGFGNFNpardpkhYNLVDPVERNTINI-PSGGWVAIRFLADNPGVWLMHCHIEIHLS 544
Cdd:cd13903  67 GAI--GGPHPFHLHGHAFSVV-RSAGSNT-------YNYVNPVRRDVVSVgTPGDGVTIRFVTDNPGPWFLHCHIDWHLE 136

                ...
gi 15227037 545 WGL 547
Cdd:cd13903 137 AGL 139
CuRO_2_LCC_like cd04205
Cupredoxin domain 2 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
163-311 8.51e-25

Cupredoxin domain 2 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259868 [Multi-domain]  Cd Length: 152  Bit Score: 100.51  E-value: 8.51e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 163 VPILFGEWFNADPQAVVQQAL--QTGAGPNAsDAHTFNGLPGP----LYNCSTKDTYKLMVKPGKTYLLRLINAALNDEL 236
Cdd:cd04205   1 RVLLLSDWYHDSAEDVLAGYMpnSFGNEPVP-DSLLINGRGRFncsmAVCNSGCPLPVITVEPGKTYRLRLINAGSFASF 79
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15227037 237 FFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPiyPNATFYMLARPYFTGQGTIDNTTVAGILQY 311
Cdd:cd04205  80 NFAIDGHNMTVIEVDGGYVEPLEVDNLDLAPGQRYDVLVKADQ--PPGNYWIRASADGRTFDEGGNPNGTAILRY 152
CuRO_1_CopA cd13848
The first cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper ...
46-146 6.52e-24

The first cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. It is part of the copper-regulatory cue operon, which employs a cytosolic metalloregulatory protein CueR that induces expression of CopA and CueO under copper stress conditions. CopA is a copper efflux P-type ATPase that is located in the inner cell membrane and is involved in copper resistance in bacteria. CopA mutant causes a loss of function including copper tolerance and oxidase activity, and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259917 [Multi-domain]  Cd Length: 116  Bit Score: 96.58  E-value: 6.52e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  46 KTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIrqLRSGWADGPSYVTQCPIRMGQSYVYNFTVTgQRG 125
Cdd:cd13848  17 KEGEAITVNGQVPGPLLRFKEGDDATIRVHNRLDEDTSIHWHGL--LLPNDMDGVPGLSFPGIKPGETFTYRFPVR-QSG 93
                        90       100
                ....*....|....*....|..
gi 15227037 126 TLWWHAHIQWMRAT-VYGPLII 146
Cdd:cd13848  94 TYWYHSHSGLQEQTgLYGPIII 115
CuRO_3_Diphenol_Ox cd13904
The third cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to ...
473-554 1.86e-23

The third cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to the laccase family. It catalyzes the initial steps in melanin biosynthesis from diphenols. Melanin is one of the virulence factors of infectious fungi. In the pathogenesis of C. neoformans, melanin pigments have been shown to protect the fungal cells from oxidative and microbicidal activities of host defense systems. Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259971 [Multi-domain]  Cd Length: 158  Bit Score: 96.98  E-value: 1.86e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 473 AHPIHLHGFNFYVVGQGFGNFNPARDPK-HYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLtMAW 551
Cdd:cd13904  77 DHPYHLHGVDFHIVARGSGTLTLEQLANvQYNTTNPLRRDTIVIPGGSWAVLRIPADNPGVWALHCHIGWHLAAGF-AGV 155

                ...
gi 15227037 552 VVL 554
Cdd:cd13904 156 VVV 158
CuRO_1_AAO_like_2 cd13847
The first cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal ...
45-146 3.28e-22

The first cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal proteins with similarity to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to multicopper oxidase (MCO) family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259916 [Multi-domain]  Cd Length: 117  Bit Score: 91.82  E-value: 3.28e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  45 CKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSN-NISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVT-G 122
Cdd:cd13847  12 FGPRPSTLINGSFPGPELRVQEGQHLWVRVYNDLEAgNTTMHFHGLSQYMSPFSDGTPLASQWPIPPGKFFDYEFPLEaG 91
                        90       100
                ....*....|....*....|....
gi 15227037 123 QRGTLWWHAHIQWMRATVYGPLII 146
Cdd:cd13847  92 DAGTYYYHSHVGFQSVTAYGALIV 115
CuRO_3_AAO_like_2 cd13895
The third cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal ...
435-552 1.01e-20

The third cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal proteins with similarity to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to multicopper oxidase (MCO) family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259962 [Multi-domain]  Cd Length: 188  Bit Score: 90.07  E-value: 1.01e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 435 TGTPPNNTMVSRG------TKVVVLKYKTTVELVLQGTSIL--GIEAHPIHLHGFNFYVVGQGFGNFNPARDP-----KH 501
Cdd:cd13895  46 TSLLPDYEAALANggfdpeTNTFPAKLGEVLDIVWQNTASPtgGLDAHPWHAHGAHYYDLGSGLGTYSATALAneeklRG 125
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15227037 502 YNlvdPVERNTINIPSG-------------GWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWV 552
Cdd:cd13895 126 YN---PIRRDTTMLYRYggkgyypppgtgsGWRAWRLRVDDPGVWMLHCHILQHMIMGMQTVWV 186
CuRO_1_2dMco_1 cd13860
The first cupredoxin domain of bacteria two domain multicopper oxidase; This subfamily ...
52-146 2.69e-19

The first cupredoxin domain of bacteria two domain multicopper oxidase; This subfamily includes bacterial two domain multicopper oxidases (2dMCOs) with similarity to McoN from Nitrosomonas europaea. 2dMCO is a trimeric type C blue copper oxidase. Each subunit houses a type 1 copper site in domain 1 and a type 2/type 3 trinuclear copper cluster at the subunit-subunit interface. The 2dMCO is proposed to be a key intermediate in the evolution of three domain MCOs. Multicopper oxidases couple oxidation of substrates with reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals.


Pssm-ID: 259929 [Multi-domain]  Cd Length: 119  Bit Score: 83.78  E-value: 2.69e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  52 TVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRqLRSGwADGPSYVTQCPIRMGQSYVYNFTVTgQRGTLWWHA 131
Cdd:cd13860  24 GYNGSVPGPTIEVTEGDRVRILVTNELPEPTTVHWHGLP-VPNG-MDGVPGITQPPIQPGETFTYEFTAK-QAGTYMYHS 100
                        90
                ....*....|....*...
gi 15227037 132 HI---QWMRATVYGPLII 146
Cdd:cd13860 101 HVdeaKQEDMGLYGAFIV 118
CuRO_2_MaLCC_like cd13880
The second cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus ...
164-313 5.96e-19

The second cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces; The subfamily of fungal laccases includes Ma-LCC and similar proteins. Ma-LCC is a multicopper oxidase (MCO) from Melanocarpus albomyces. Its crystal structure contains all four coppers at the mono- and trinuclear copper centers. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259947 [Multi-domain]  Cd Length: 167  Bit Score: 84.22  E-value: 5.96e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 164 PILFGEWFNADPQAVVQQALQTGAGPnASDAHTFNGLPGplYNCSTKDT--YKLMVKPGKTYLLRLINAALNDELFFTIA 241
Cdd:cd13880   3 PVLLTDWYHRSAFELFSEELPTGGPP-PMDNILINGKGK--FPCSTGAGsyFETTFTPGKKYRLRLINTGVDTTFRFSID 79
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15227037 242 NHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPIyPNATFYMLARPYFTGQGTIDNTTVA-GILQYQH 313
Cdd:cd13880  80 GHNLTVIAADFVPIVPYTTDSLNIGIGQRYDVIVEANQD-PVGNYWIRAEPATGCSGTNNNPDNRtGILRYDG 151
CuRO_3_AAO_like_1 cd13894
The third cupredoxin domain of plant Ascorbate oxidase homologs; This subfamily is composed of ...
415-533 7.45e-19

The third cupredoxin domain of plant Ascorbate oxidase homologs; This subfamily is composed of plant pollen multicopper oxidase homologous to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. This subfamily does not harbor T1 copper or trinuclear copper binding sites.


Pssm-ID: 259961 [Multi-domain]  Cd Length: 123  Bit Score: 82.48  E-value: 7.45e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 415 KSKNVFMTDFPTAPIIPfnytGTPPNNTMVSRGTkvvvlkYKTTVELVLQgTSILGIEAHpiHLHGFNFYVVGQGFGNFN 494
Cdd:cd13894  13 KIKGVFQLDSIPDPPTR----KTPYLGTSVINGT------YRGFIEIVFQ-NNEDTVQSW--HLDGYSFFVVGMGFGDWT 79
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 15227037 495 PARDpKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVW 533
Cdd:cd13894  80 PEKR-KSYNLLDAVSRSTTQVYPGSWTAILLELDNVGMW 117
CuRO_D1_2dMcoN_like cd13859
The first cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar ...
54-146 1.17e-18

The first cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar proteins; This family includes bacterial two domain multicopper oxidases (2dMCOs) represented by the McoN from Nitrosomonas europaea. McoN is a trimeric type C blue copper oxidase. Each subunit houses a type 1 copper site in domain 1 and a type 2/type 3 trinuclear copper cluster at the subunit-subunit interface. The 2dMCO is proposed to be a key intermediate in the evolution of three domain MCOs. Its biological function has not been characterized. Multicopper oxidases couple oxidation of substrates with reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals.


Pssm-ID: 259928 [Multi-domain]  Cd Length: 122  Bit Score: 82.14  E-value: 1.17e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  54 NGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTgQRGTLWWHAHI 133
Cdd:cd13859  26 NGQVPGPLIHVKEGDDLVVHVTNNTTLPHTIHWHGVLQMGSWKMDGVPGVTQPAIEPGESFTYKFKAE-RPGTLWYHCHV 104
                        90
                ....*....|....*...
gi 15227037 134 Q-----WMRAtVYGPLII 146
Cdd:cd13859 105 NvnehvGMRG-MWGPLIV 121
CuRO_3_CopA cd13896
The third cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper ...
459-553 6.56e-18

The third cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. It is part of the copper-regulatory cue operon, which employs a cytosolic metalloregulatory protein CueR that induces expression of CopA and CueO under copper stress conditions. CopA is a copper efflux P-type ATPase that is located in the inner cell membrane and is is involved in copper resistance in bacteria. CopA mutant causes a loss of function including copper tolerance and oxidase activity and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259963 [Multi-domain]  Cd Length: 115  Bit Score: 79.61  E-value: 6.56e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 459 VELVLQGTSILgieAHPIHLHGFNFYVVGqGFGNFNPARDpkhynlvdpvernTINIPSGGWVAIRFLADNPGVWLMHCH 538
Cdd:cd13896  38 VRIVFVNDTMM---AHPMHLHGHFFQVEN-GNGEYGPRKD-------------TVLVPPGETVSVDFDADNPGRWAFHCH 100
                        90
                ....*....|....*
gi 15227037 539 IEIHLSWGltMAWVV 553
Cdd:cd13896 101 NLYHMEAG--MMRVV 113
CuRO_1_CumA_like cd13861
The first cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) ...
54-146 4.39e-17

The first cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) subfamily includes CumA from Pseudomonas putida, which is involved in the oxidation of Mn(II). However, the cumA gene has been identified in a variety of bacterial species, including both Mn(II)-oxidizing and non-Mn(II)-oxidizing strains. Thus, the proteins in this family may catalyze the oxidation of other substrates. MCO catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water and has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259930 [Multi-domain]  Cd Length: 119  Bit Score: 77.27  E-value: 4.39e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  54 NGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRqLRSGwADGPSYVTQCPIRMGQSYVYNFTVTgQRGTLWWHAHI 133
Cdd:cd13861  26 NGQVPGPELRVRQGDTLRVRLTNRLPEPTTIHWHGLR-LPNA-MDGVPGLTQPPVPPGESFTYEFTPP-DAGTYWYHPHV 102
                        90
                ....*....|....*.
gi 15227037 134 ---QWMRATVYGPLII 146
Cdd:cd13861 103 gsqEQLDRGLYGPLIV 118
CuRO_D2_2dMcoN_like cd04202
The second cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar ...
469-554 1.32e-16

The second cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar proteins; This family includes bacterial two domain multicopper oxidases (2dMCOs) represented by the McoN from Nitrosomonas europaea. McoN is a trimeric type C blue copper oxidase. Each subunit houses a type 1 copper site in domain 1 and a type 2/type 3 trinuclear copper cluster at the subunit-subunit interface. The 2dMCO is proposed to be a key intermediate in the evolution of three domain MCOs. The biological function of McoN has not been characterized. Multicopper oxidases couple oxidation of substrates with reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals.


Pssm-ID: 259865 [Multi-domain]  Cd Length: 138  Bit Score: 76.52  E-value: 1.32e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 469 LGIEAHPIHLHGFNFYVVGQGFGNFNPArdpkhynlvDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLT 548
Cdd:cd04202  58 LSMDHHPMHLHGHFFLVTATDGGPIPGS---------APWPKDTLNVAPGERYDIEFVADNPGDWMFHCHKLHHAMNGMG 128

                ....*.
gi 15227037 549 MAWVVL 554
Cdd:cd04202 129 GGMMTL 134
CuRO_1_AAO_like_1 cd13846
The first cupredoxin domain of plant Ascorbate oxidase homologs; This subfamily is composed of ...
32-146 1.58e-15

The first cupredoxin domain of plant Ascorbate oxidase homologs; This subfamily is composed of plant pollen multicopper oxidase homologous to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. This subfamily does not harbor trinuclear copper binding histidines.


Pssm-ID: 259915 [Multi-domain]  Cd Length: 118  Bit Score: 72.82  E-value: 1.58e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  32 YQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSyVTQCPIRMG 111
Cdd:cd13846   3 FDWNVSYITASPLGVPQQVIAINGQFPGPTINVTTNDNVVVNVFNSLDEPLLLTWNGIQQRRNSWQDGVL-GTNCPIPPG 81
                        90       100       110
                ....*....|....*....|....*....|....*.
gi 15227037 112 QSYVYNFTVTGQRGTLWWHAHIQWMRAT-VYGPLII 146
Cdd:cd13846  82 WNWTYKFQVKDQIGSFFYFPSLHFQRAAgGFGGIRV 117
CuRO_2_Fet3p_like cd13877
The second Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase ...
214-279 2.10e-15

The second Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase reaction, which couples the oxidation of Fe(II) to Fe(III) with the four-electron reduction of molecular oxygen to water. Fet3p is a type I membrane protein with the amino-terminal oxidase domain in the extracellular space and the carboxyl terminus in the cytoplasm. The periplasmic produced Fe(III) is transferred to the permease Ftr1p for import into the cytosol. The four copper ions are inserted post-translationally and are essential for catalytic activity, thus linking copper and iron homeostasis. Like other related multicopper oxidases (MCOs), Fet3p is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259945 [Multi-domain]  Cd Length: 148  Bit Score: 73.35  E-value: 2.10e-15
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15227037 214 KLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKP 279
Cdd:cd13877  47 TINFEPGKTYLLRIINMGAFASQYFHIEGHDMTIIEVDGVYVKPYPVDTLYIAVGQRYSVLVKAKN 112
CuRO_2_AAO_like_2 cd13873
The second cupredoxin domain of plant Ascorbate oxidase homologs; This family includes plant ...
163-280 4.61e-15

The second cupredoxin domain of plant Ascorbate oxidase homologs; This family includes plant laccases similar to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to multicopper oxidase (MCO) family which couples oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259941 [Multi-domain]  Cd Length: 161  Bit Score: 73.09  E-value: 4.61e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 163 VPILFGEWFNADPQAVVQQALQTG-AGPNASDAHTFNGLPGP------LYNCSTKDTYKLM-VKPGKTYLLRLINAALND 234
Cdd:cd13873   3 RILLFSDYFPKTDSTIETGLTATPfVWPGEPNALLVNGKSGGtcnksaTEGCTTSCHPPVIdVEPGKTYRFRFIGATALS 82
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 15227037 235 ELFFTIANH-TLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPI 280
Cdd:cd13873  83 FVSLGIEGHdNLTIIEADGSYTKPAETDHLQLGSGQRYSFLLKTKSL 129
CuRO_2_MCO_like_1 cd13886
The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases ...
205-311 9.76e-15

The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This family of MCOs is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259953 [Multi-domain]  Cd Length: 163  Bit Score: 71.92  E-value: 9.76e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 205 YNCSTKDTY-KLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPIYPN 283
Cdd:cd13886  53 YCCASNGTYyNFTLEPNKTYRLRLINAGSFADFTFSVDGHPLTVIEADGTLVEPVEVHSITISVAQRYSVILTTNQPTGG 132
                        90       100       110
                ....*....|....*....|....*....|.
gi 15227037 284 AtFYMLAR---PYFTGQGTIDNTTVAGILQY 311
Cdd:cd13886 133 N-FWMRAElntDCFTYDNPNLDPDVRAIVSY 162
CuRO_2_Diphenol_Ox cd13883
The second cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to ...
207-311 1.10e-14

The second cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to the laccase family. It catalyzes the initial steps in melanin biosynthesis from diphenols. Melanin is one of the virulence factors of infectious fungi. In the pathogenesis of C. neoformans, melanin pigments have been shown to protect the fungal cells from oxidative and microbicidal activities of host defense systems. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Laccase is a multicopper oxidase (MCO) composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259950 [Multi-domain]  Cd Length: 164  Bit Score: 71.99  E-value: 1.10e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 207 CSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYV-KPFQTNIVLLGPGQTTNVLLKTKPIYPNAT 285
Cdd:cd13883  57 CTQTSPPEIQVEAGKRTRFRLINAGSHAMFRFSVDNHTLNVVEADDTPVyGPTVVHRIPIHNGQRYSVIIDTTSGKAGDS 136
                        90       100
                ....*....|....*....|....*...
gi 15227037 286 FYMLAR--PYFTGQGTIDNTTVAgILQY 311
Cdd:cd13883 137 FWLRARmaTDCFAWDLQQQTGKA-ILRY 163
CuRO_2_Tv-LCC_like cd13882
The second cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes versicolor; ...
165-312 4.24e-14

The second cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes versicolor; This subfamily of fungal laccases includes Tv-LCC from Trametes versicolor and Rs-LCC2 from plant pathogenic fungus Rhizoctonia solani. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Laccase is a multicopper oxidase (MCO) composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259949 [Multi-domain]  Cd Length: 159  Bit Score: 70.13  E-value: 4.24e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 165 ILFGEWFNADPQAVVQQALQTGAGPnasDAHTFNGL----PGPlyncsTKDTYKLMVKPGKTYLLRLINAALNDELFFTI 240
Cdd:cd13882   3 ITLGDWYHTAAPDLLATTAGVPPVP---DSGTINGKgrfdGGP-----TSPLAVINVKRGKRYRFRVINISCIPSFTFSI 74
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15227037 241 ANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPiyPNATFYMLARPYFTGQGTIDNTTVAGILQYQ 312
Cdd:cd13882  75 DGHNLTVIEADGVETKPLTVDSVQIYAGQRYSVVVEANQ--PVDNYWIRAPPTGGTPANNGGQLNRAILRYK 144
CuRO_1_LCC_like_3 cd13865
The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases ...
39-148 9.39e-13

The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259933 [Multi-domain]  Cd Length: 115  Bit Score: 65.02  E-value: 9.39e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  39 KNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGI----RQlrsgwaDGPSYVTQCPIRMGQSY 114
Cdd:cd13865   8 RTIEVNGKAATVYGIRQPDGTEGLRLTEGDRFDVELENRLDEPTTIHWHGLippnLQ------DGVPDVTQPPIPPGQSQ 81
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 15227037 115 VYNFTVtGQRGTLWWHAHI----QWMRAtvyGPLIILP 148
Cdd:cd13865  82 RYDFPL-VQPGTFWMHSHYglqeQKLLA---APLIIRS 115
CuRO_2_AAO cd13871
The second cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the ...
199-277 1.15e-12

The second cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. MCOs couple oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259939 [Multi-domain]  Cd Length: 166  Bit Score: 66.03  E-value: 1.15e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 199 GLPGPLYNCSTKDT--YKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLK 276
Cdd:cd13871  56 SLPSPVCNKSNPQCapFILHVSPGKTYRLRIASVTALSSLNFIIEGHNLTVVEADGNYVQPFEVSNLDIYSGETYSVLVT 135

                .
gi 15227037 277 T 277
Cdd:cd13871 136 A 136
CuRO_3_McoC_like cd13902
The third cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family ...
474-550 6.70e-12

The third cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family includes bacteria multicopper oxidases (MCOs) represented by McoC from pathogenic bacterium Campylobacter jejuni. McoC is a periplasmic multicopper oxidase, which has been characterized to be associated with copper homeostasis. McoC may also function to protect against oxidative stress as it may convert metallic ions into their less toxic form. MCOs are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. They are capable of oxidizing a vast range of substrates, varying from aromatic compunds to inorganic compounds such as metals. Most MCOs have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259969 [Multi-domain]  Cd Length: 125  Bit Score: 62.80  E-value: 6.70e-12
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15227037 474 HPIHLHGFNFYVVGQgfgNFNPARDPKhynlvdPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLtMA 550
Cdd:cd13902  55 HPFHLHGTQFQVLEI---DGNPQKPEY------RAWKDTVNLPPGEAVRIATRQDDPGMWMYHCHILEHEDAGM-MG 121
CuRO_3_MCO_like_3 cd13909
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
473-552 3.13e-11

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259976 [Multi-domain]  Cd Length: 137  Bit Score: 61.38  E-value: 3.13e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 473 AHPIHLHGFNFYVVGQGfGNFNPARDpkhynlvdpvernTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLtMAWV 552
Cdd:cd13909  70 PHGMHLHGHHFRAILPN-GALGPWRD-------------TLLMDRGETREIAFVADNPGDWLLHCHMLEHAAAGM-MSWF 134
CuRO_1_MCO_like_2 cd13864
The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases ...
34-146 4.58e-11

The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259932 [Multi-domain]  Cd Length: 139  Bit Score: 61.01  E-value: 4.58e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  34 FDIQLKNITRL-CKT-KTIVTVNGKFP--GPRVTAREGDNLQIKVVNHVSNN------------ISIHWHGIRQLRSGWA 97
Cdd:cd13864   2 TLLIILRISVEyNKDgKQIISINGSNDtiGPTIRVKSGDTLNLLVTNHLCNEqelskiwqdycpTSIHFHGLVLENFGKQ 81
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  98 -----DGPSYVTQCPIRMGQSYVYNFTVTGQR-GTLWWHAH--IQW---MRatvyGPLII 146
Cdd:cd13864  82 lanlvDGVPGLTQYPIGVGESYWYNFTIPEDTcGTFWYHSHssVQYgdgLR----GVFIV 137
CuRO_1_McoC_like cd13855
The first cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family ...
46-132 1.01e-10

The first cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family includes bacteria multicopper oxidases (MCOs) represented by McoC from pathogenic bacterium Campylobacter jejuni. McoC is a periplasmic multicopper oxidase, which has been characterized to be associated with copper homeostasis. McoC may also function to protect against oxidative stress as it may convert metallic ions into their less toxic form. MCOs are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. They are capable of oxidizing a vast range of substrates, varying from aromatic compunds to inorganic compounds such as metals. Most MCOs have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259924 [Multi-domain]  Cd Length: 121  Bit Score: 59.41  E-value: 1.01e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  46 KTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSgwADG-PSYvtqcPIRMGQSYVYNFTV-TGQ 123
Cdd:cd13855  19 KPTEFWAYNGSVPGPLIEVFEGDTVEITFRNRLPEPTTVHWHGLPVPPD--QDGnPHD----PVAPGNDRVYRFTLpQDS 92

                ....*....
gi 15227037 124 RGTLWWHAH 132
Cdd:cd13855  93 AGTYWYHPH 101
CuRO_1_2DMCO_NIR_like cd11024
The cupredoxin domain 1 of a two-domain laccase related to nitrite reductase; The two-domain ...
52-149 1.20e-10

The cupredoxin domain 1 of a two-domain laccase related to nitrite reductase; The two-domain laccase (small laccase) in this family differs significantly from all laccases. It resembles the two domain nitrite reductase in both sequence and structure. It consists of two cupredoxin domains and forms trimers and hence resembles the quaternary structure of nitrite reductases more than that of large laccases. There are three trinuclear copper clusters in the enzyme localized between domains 1 and 2 of each pair of neighbor chains. Three copper ions of type 1 lie close to one another near the surface of the central part of the trimer, and, effectively, a trimeric substrate binding site is formed in their vicinity. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic, notably phenolic, and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities.


Pssm-ID: 259910 [Multi-domain]  Cd Length: 119  Bit Score: 58.82  E-value: 1.20e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  52 TVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIrqlRSGWADGPSYVtqcPIRMGQSYVYNFtVTGQRGTLWWHA 131
Cdd:cd11024  25 TYNGTVPGPTLRATEGDLVRIHFINTGDHPHTIHFHGI---HDAAMDGTGLG---PIMPGESFTYEF-VAEPAGTHLYHC 97
                        90       100
                ....*....|....*....|..
gi 15227037 132 HIQ----WMRATVYGPLIILPK 149
Cdd:cd11024  98 HVQplkeHIAMGLYGAFIVDPK 119
CuRO_3_CumA_like cd13906
The third cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) ...
474-552 1.54e-10

The third cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) subfamily includes CumA from Pseudomonas putida, which is involved in the oxidation of Mn(II). However, the cumA gene has been identified in a variety of bacterial species, including both Mn(II)-oxidizing and non-Mn(II)-oxidizing strains. Thus, the proteins in this family may catalyze the oxidation of other substrates. MCO catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water and has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259973 [Multi-domain]  Cd Length: 138  Bit Score: 59.32  E-value: 1.54e-10
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15227037 474 HPIHLHGFNFYVVGQgfgNFNPARDPKHynlvdpveRNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLtMAWV 552
Cdd:cd13906  69 HPMHLHGHFFRVLSR---NGRPVPEPFW--------RDTVLLGPKETVDIAFVADNPGDWMFHCHILEHQETGM-MGVI 135
CuRO_2_AAO_like_1 cd13872
The second cupredoxin domain of plant pollen multicopper oxidase homologous to ascorbate ...
165-311 1.59e-10

The second cupredoxin domain of plant pollen multicopper oxidase homologous to ascorbate oxidase; The proteins in this subfamily are expressed in plant pollen. They share homology to ascorbate oxidase and other members of the blue copper oxidase family. The expression of the protein is detected during germination and pollen tube growth. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It is a member of the multicopper oxidase (MCO) family that couples oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259940 [Multi-domain]  Cd Length: 141  Bit Score: 59.34  E-value: 1.59e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 165 ILFGEWFNADPQaVVQQALQTGAGPNASDAHTFNGLpGPlYNCSTKDTyKLMVKPGKTYLLRLINAALNDELFFTIANHT 244
Cdd:cd13872   5 VLIGDWYKTDHK-TLRQSLDKGRTLGRPDGILINGK-GP-YGYGANET-SFTVEPGKTYRLRISNVGLRTSLNFRIQGHK 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15227037 245 LTVVEADACYVKpfQTNIVLLG--PGQTTNVLLKTKPiyPNATFYMLARPYFTGQgtidNTTVAGILQY 311
Cdd:cd13872  81 MLLVETEGSYTA--QNTYDSLDvhVGQSYSVLVTADQ--SPKDYYIVASSRFLSP----ELTGVAILHY 141
CuRO_1_CueO_FtsP cd04232
The first Cupredoxin domain of the multicopper oxidase CueO, the cell division protein FtsP, ...
46-146 3.04e-10

The first Cupredoxin domain of the multicopper oxidase CueO, the cell division protein FtsP, and similar proteins; CueO is a multicopper oxidase (MCO) that is part of the copper-regulatory cue operon, which employs a cytosolic metalloregulatory protein CueR that induces expression of CopA and CueO under copper stress conditions. CueO is a periplasmic multicopper oxidase that is stimulated by exogenous copper(II). FtsP (also named SufI) is a component of the cell division apparatus. It is involved in protecting or stabilizing the assembly of divisomes under stress conditions. FtsP belongs to the multicopper oxidase superfamily but lacks metal cofactors. The protein is localized at septal rings and may serve as a scaffolding function. Members of this subfamily contain three cupredoxin domains and this model represents the first domain. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. FtsP does not contain any copper binding sites.


Pssm-ID: 259894 [Multi-domain]  Cd Length: 120  Bit Score: 57.97  E-value: 3.04e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  46 KTKTIvTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIrQLRSGWADGPsyvtQCPIRMGQSYVYNFTVTGQRG 125
Cdd:cd04232  19 KTATW-GYNGSYLGPTIRVKKGDTVRINVTNNLDEETTVHWHGL-HVPGEMDGGP----HQPIAPGQTWSPTFTIDQPAA 92
                        90       100
                ....*....|....*....|....*...
gi 15227037 126 TLWWHAHIqwMRAT---VY----GPLII 146
Cdd:cd04232  93 TLWYHPHT--HGKTaeqVYrglaGLFII 118
CuRO_1_McoP_like cd13852
The first cupredoxin domain of multicopper oxidase McoP and similar proteins; This family ...
59-132 5.60e-10

The first cupredoxin domain of multicopper oxidase McoP and similar proteins; This family includes archaeal and bacterial multicopper oxidases (MCOs), represented by the extremely thermostable McoP from the hyperthermophilic archaeon Pyrobaculum aerophilum. McoP is an efficient metallo-oxidase that catalyzes the oxidation of cuprous and ferrous ions. It is noteworthy that McoP has three-fold higher catalytic efficiency when using nitrous oxide as the electron acceptor than when using dioxygen, the typical oxidizing substrate of MCOs. McoP may function as a novel archaeal nitrous oxide reductase that is probably involved in the denitrification pathway in archaea. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259921 [Multi-domain]  Cd Length: 114  Bit Score: 56.91  E-value: 5.60e-10
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15227037  59 GPRVTAREGDNLQIKVVNHVSNNISIHWHGirqLRSGWA-DG-PSYVtqcpIRMGQSYVYNFTVTGQRGTLWWHAH 132
Cdd:cd13852  24 GPILRLRKGQKVRITFKNNLPEPTIIHWHG---LHVPAAmDGhPRYA----IDPGETYVYEFEVLNRAGTYWYHPH 92
CuRO_3_MCO_like_2 cd13908
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
472-549 1.14e-09

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259975 [Multi-domain]  Cd Length: 122  Bit Score: 56.31  E-value: 1.14e-09
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15227037 472 EAHPIHLHGFNFYVVgQGFGNfnpardPKHynlvdPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTM 549
Cdd:cd13908  53 DAHPMHLHRHTFEVT-RIDGK------PTS-----GLRKDVVMLGGYQRVEVDFVADNPGLTLFHCHQQLHMDYGFMA 118
CuRO_2_tcLCC_insect_like cd13884
The second cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium ...
217-311 2.36e-08

The second cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium castaneum; This multicopper oxidase (MCO) subfamily includes the majority of insect laccases. One member is laccase 2 from Tribolium castaneum, which is required for beetle cuticle tanning. Laccase (polyphenol oxidase EC 1.10.3.2) is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic - notably phenolic and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi, plants and insects. Laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259951 [Multi-domain]  Cd Length: 150  Bit Score: 53.39  E-value: 2.36e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 217 VKPGKTYLLRLINAALNDELF-FTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKT-KPIypnATFYMLARPYf 294
Cdd:cd13884  59 VEQGKRYRFRLINAGATNCPFrVSIDGHTLTVIASDGNDVEPVEVDSIIIYPGERYDFVLNAnQPI---GNYWIRARGL- 134
                        90
                ....*....|....*..
gi 15227037 295 tGQGTIDNTTVAGILQY 311
Cdd:cd13884 135 -EDCDNRRLQQLAILRY 150
CuRO_1_CuNIR_like cd04201
Cupredoxin domain 1 of Copper-containing nitrite reductase and two-domain laccase; ...
52-149 3.35e-07

Cupredoxin domain 1 of Copper-containing nitrite reductase and two-domain laccase; Copper-containing nitrite reductase (CuNIR), which catalyzes the reduction of NO2- to NO, is the key enzyme in the denitrification process in denitrifying bacteria. CuNIR contains at least one type 1 copper center and a type 2 copper center, which serves as the active site of the enzyme. A histidine, bound to the Type 2 Cu center, is responsible for binding and reducing nitrite. A Cys-His bridge plays an important role in facilitating rapid electron transfer from the type 1 center to the type 2 center. A reduced type I blue copper protein (pseudoazurin) was found to be a specific electron transfer donor for the copper-containing NIR in bacteria Alcaligenes faecalis. The two-domain laccase (small laccase) in this family differs significantly from all laccases. It resembles two domain nitrite reductase in both sequence homology and structure similarity. It consists of two domains and forms trimers and hence resembles the quaternary structure of nitrite reductases more than that of larger laccases.


Pssm-ID: 259864 [Multi-domain]  Cd Length: 120  Bit Score: 49.03  E-value: 3.35e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  52 TVNGKFPGPRVTAREGDNLQIKVVNHVSNNI--SIHWHGIRQlrsgwADGPSYVTQcpIRMGQSYVYNFTVTgQRGTLWW 129
Cdd:cd04201  25 TFDGDIPGPMLRVREGDTVELHFSNNPSSTMphNIDFHAATG-----AGGGAGATF--IAPGETSTFSFKAT-QPGLYVY 96
                        90       100
                ....*....|....*....|....
gi 15227037 130 HAH---IQWMRAT-VYGPLIILPK 149
Cdd:cd04201  97 HCAvapVPMHIANgMYGLILVEPK 120
CuRO_2_Abr2_like cd13876
The second cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus ...
164-312 5.22e-07

The second cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus fumigatus; Abr2 is involved in conidial pigment biosynthesis in Aspergillus fumigatus. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259944 [Multi-domain]  Cd Length: 138  Bit Score: 49.12  E-value: 5.22e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 164 PILFGEWFNADPQAVVQQALQTGAGPNASDAHTFNGlPGPLYnCSTKDtyklmVKPGKTYL-LRLINAALNDELFFTIAN 242
Cdd:cd13876   2 PIILSDWRHLTSEEYWKIMRASGIEPFCYDSILING-KGRVY-CLIVI-----VDPGERWVsLNFINAGGFHTLAFSIDE 74
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 243 HTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPiyPNATFYMlaRpyFTGQGTIDNTTVAGILQYQ 312
Cdd:cd13876  75 HPMWVYAVDGGYIEPQLVDAISITNGERYSVLVKLDK--PPGDYTI--R--VASTGAPQVISGYAILRYK 138
CuRO_2_CopA_like_1 cd13870
The second cupredoxin domain of CopA copper resistance protein like family; The members of ...
217-293 5.40e-07

The second cupredoxin domain of CopA copper resistance protein like family; The members of this family are copper resistance protein (CopA) homologs. CopA is multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. CopA is involved in copper resistance in bacteria. CopA mutant causes a loss of function, including copper tolerance and oxidase activity, and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259938 [Multi-domain]  Cd Length: 117  Bit Score: 48.48  E-value: 5.40e-07
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15227037 217 VKPGKTYLLRLINAAlNDELF-FTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKpiypNATFYMLARPY 293
Cdd:cd13870  33 ARPGDRLRLRLINAA-GDTAFrVALAGHRLTVTHTDGFPVEPVEVDALLIGMGERYDAIVTAN----NGIWPLVALPE 105
PRK10965 PRK10965
multicopper oxidase; Provisional
53-132 6.15e-06

multicopper oxidase; Provisional


Pssm-ID: 236810 [Multi-domain]  Cd Length: 523  Bit Score: 48.87  E-value: 6.15e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037   53 VNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQlrSGWAD-GPsyvtQCPIRMGQSYVYNFTVTGQRGTLWWHA 131
Cdd:PRK10965  70 YNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEV--PGEVDgGP----QGIIAPGGKRTVTFTVDQPAATCWFHP 143

                 .
gi 15227037  132 H 132
Cdd:PRK10965 144 H 144
CuRO_1_MCO_like_1 cd13862
The first cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
48-146 6.38e-06

The first cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259931 [Multi-domain]  Cd Length: 123  Bit Score: 45.59  E-value: 6.38e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  48 KTIVTV--NGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGirQLRSGWADGPSYVTQCPIRMGQSYVYNFTvTGQRG 125
Cdd:cd13862  18 RTISTLgyNGQVPGPLLRMRQGVSVTVDVFNDTDIPEYVHWHG--LPLPADVDGAMEEGTPSVPPHGHRRYRMT-PRPAG 94
                        90       100
                ....*....|....*....|....*...
gi 15227037 126 TLWWHAHI----QWMRAT---VYGPLII 146
Cdd:cd13862  95 FRWYHTHVmtmdDLTRGQysgLFGFVYI 122
CuRO_3_Tth-MCO_like cd13900
The third cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus ...
472-539 7.14e-06

The third cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus Thermophilus; The subfamily of bacterial laccases includes Tth-MCO and similar proteins. Tth-MCO is a hyperthermophilic multicopper oxidase (MCO) from thermus thermophilus HB27. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259967 [Multi-domain]  Cd Length: 123  Bit Score: 45.31  E-value: 7.14e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 472 EAHPIHLHGFNFYVVgqgfgnfnpARDPKhyNLVDPVERNTINIPSGGWVAIR--FLaDNPGVWLMHCHI 539
Cdd:cd13900  52 EDHPFHIHVNPFQVV---------SINGK--PGLPPVWRDTVNVPAGGSVTIRtrFR-DFTGEFVLHCHI 109
CuRO_1_Tth-MCO_like cd13853
The first cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus ...
52-132 7.52e-06

The first cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus Thermophilus; The subfamily of bacterial laccases includes Tth-MCO and similar proteins. Tth-MCO is a hyperthermophilic multicopper oxidase (MCO) from thermus thermophilus HB27. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259922 [Multi-domain]  Cd Length: 139  Bit Score: 45.71  E-value: 7.52e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  52 TVNGKFPGPRVTAREGDNLQIKVVN-----------------HVSNNISIHWHGIRQLRSGWADGPsYVTqcpIRMGQSY 114
Cdd:cd13853  24 TYNGSIPGPTLRVRPGDTLRITLKNdlppegaaneapapntpHCPNTTNLHFHGLHVSPTGNSDNV-FLT---IAPGESF 99
                        90       100
                ....*....|....*....|
gi 15227037 115 VYNFTVTGQR--GTLWWHAH 132
Cdd:cd13853 100 TYEYDIPADHppGTYWYHPH 119
CuRO_2_MCO_like_2 cd13887
The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases ...
217-276 5.03e-05

The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This family of MCOs is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259954 [Multi-domain]  Cd Length: 114  Bit Score: 42.70  E-value: 5.03e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 217 VKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLK 276
Cdd:cd13887  28 VEPGGRVRLRVINGSTATNFHIDLGDLKGTLIAVDGNPVQPVEGRRFPLATAQRLDLLVT 87
CuRO_3_MCO_like_1 cd13907
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
473-538 8.33e-05

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259974 [Multi-domain]  Cd Length: 154  Bit Score: 43.24  E-value: 8.33e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15227037 473 AHPIHLHGFNFYVVG-QGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAI--RFlADNPGVWLMHCH 538
Cdd:cd13907  71 PHPIHLHGVQFQVLErSVGPKDRAYWATVKDGFIDEGWKDTVLVMPGERVRIikPF-DDYKGLFLYHCH 138
Cupredoxin cd00920
Cupredoxin superfamily; Cupredoxins contain type I copper centers and are involved in ...
472-544 1.32e-04

Cupredoxin superfamily; Cupredoxins contain type I copper centers and are involved in inter-molecular electron transfer reactions. Cupredoxins are blue copper proteins, having an intense blue color due to the presence of a mononuclear type 1 (T1) copper site. Structurally, the cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel. Some of these proteins have lost the ability to bind copper. The majority of family members contain multiple cupredoxin domain repeats: ceruloplasmin and the coagulation factors V/VIII have six repeats; laccase, ascorbate oxidase, spore coat protein A, and multicopper oxidase CueO contain three repeats; and nitrite reductase has two repeats. Others are mono-domain cupredoxins, such as plastocyanin, pseudoazurin, plantacyanin, azurin, rusticyanin, stellacyanin, quinol oxidase, and the periplasmic domain of cytochrome c oxidase subunit II.


Pssm-ID: 259860 [Multi-domain]  Cd Length: 110  Bit Score: 41.45  E-value: 1.32e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15227037 472 EAHPIHLHGFNFYVVGQGFGNFnpardpkhynlvdPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLS 544
Cdd:cd00920  43 ENHSVTIAGFGVPVVAMAGGAN-------------PGLVNTLVIGPGESAEVTFTTDQAGVYWFYCTIPGHNH 102
CuRO_2_CopA cd13874
The second cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper ...
193-276 1.66e-04

The second cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. It is part of the copper-regulatory cue operon, which employs a cytosolic metalloregulatory protein CueR that induces expression of CopA and CueO under copper stress conditions. CopA is a copper efflux P-type ATPase that is located in the inner cell membrane and is is involved in copper resistance in bacteria. CopA mutant causes a loss of function including copper tolerance and oxidase activity and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259942 [Multi-domain]  Cd Length: 112  Bit Score: 41.13  E-value: 1.66e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 193 DAHTFNGLPgplyncsTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTN 272
Cdd:cd13874  12 DTYLINGKP-------PEDNWTGLFKPGERVRLRFINAAASTYFDVRIPGGKMTVVAADGQDVRPVEVDEFRIGVAETYD 84

                ....
gi 15227037 273 VLLK 276
Cdd:cd13874  85 VIVT 88
CuRO_3_BOD cd13889
The third cupredoxin domain of Bilirubin oxidase (BOD); Bilirubin oxidase (BOD) catalyzes the ...
474-553 6.80e-04

The third cupredoxin domain of Bilirubin oxidase (BOD); Bilirubin oxidase (BOD) catalyzes the oxidation of bilirubin to biliverdin and the four-electron reduction of molecular oxygen to water. It is used in diagnosing jaundice through the determination of bilirubin in serum. BOD is a member of the multicopper oxidase (MCO) family that also includes laccase, ascorbate oxidase and ceruloplasmin. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259956 [Multi-domain]  Cd Length: 124  Bit Score: 39.99  E-value: 6.80e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 474 HPIHLHGFNFYVV---GQGFGNFNPARDPKHYNLVDPVERNTinipsggwVAIRFlADNPGVWLMHCHIEIHLSWGLTMA 550
Cdd:cd13889  51 HPIHIHLEDFQILsrnGGSRAVPPYERGRKDVVYLGPGEEVR--------VLMRF-RPFRGKYMMHCHNLVHEDHDMMLR 121

                ...
gi 15227037 551 WVV 553
Cdd:cd13889 122 FEV 124
CuRO_6_ceruloplasmin cd11012
The sixth cupredoxin domain of Ceruloplasmin; Ceruloplasmin is a multicopper oxidase essential ...
471-554 1.05e-03

The sixth cupredoxin domain of Ceruloplasmin; Ceruloplasmin is a multicopper oxidase essential for normal iron homeostasis and copper transport in blood. It also functions in amine oxidation and as an antioxidant preventing free radicals in serum. The protein has 6 cupredoxin domains with six copper centers; three mononuclear sites in domain 2, 4 and 6 and three in the form of trinuclear clusters at the interface of domains 1 and 6. Ceruloplasmin exhibits internal sequence homology that appears to have evolved from the triplication of a sequence unit composed of two tandem cupredoxin domains. This model represents the sixth cupredoxin domain of ceruloplasmin.


Pssm-ID: 259898 [Multi-domain]  Cd Length: 145  Bit Score: 39.85  E-value: 1.05e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 471 IEAHPIHLHGFNF-YVVGQGFgnfnpardpkhynlvdpvERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTM 549
Cdd:cd11012  79 IDIHTAHFHGHSFdYKHRGVY------------------RSDVFDLFPGTFQTVEMIPRTPGTWLLHCHVTDHIHAGMET 140

                ....*
gi 15227037 550 AWVVL 554
Cdd:cd11012 141 TYTVL 145
CuRO_3_McoP_like cd13888
The third cupredoxin domain of multicopper oxidase McoP and similar proteins; This subfamily ...
474-547 1.62e-03

The third cupredoxin domain of multicopper oxidase McoP and similar proteins; This subfamily includes archaeal and bacterial multicopper oxidases (MCOs), represented by the extremely thermostable McoP from the hyperthermophilic archaeon Pyrobaculum aerophilum. McoP is an efficient metallo-oxidase that catalyzes the oxidation of cuprous and ferrous ions. It is noteworthy that McoP has three-fold higher catalytic efficiency when using nitrous oxide as electron acceptor than when using dioxygen, the typical oxidizing substrate of multicopper oxidases. McoP may function as a novel archaeal nitrous oxide reductase that is probably involved in the denitrification pathway in archaea. Members of this subfamily contain three cupredoxin domain repeats. The copper ions are bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259955 [Multi-domain]  Cd Length: 139  Bit Score: 39.09  E-value: 1.62e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 474 HPIHLHGFNFYVVGQGFG---NFNPARDPKHYNLVDPVERNTINIPSGGWV--AIRFLADNPG--VWLMHCHIEIHLSWG 546
Cdd:cd13888  52 HPMHIHGFQFQVLERSDSppqVAELAVAPSGRTATDLGWKDTVLVWPGETVriAVDFTHDYPGdqLYLLHCHNLEHEDDG 131

                .
gi 15227037 547 L 547
Cdd:cd13888 132 M 132
CuRO_1_CuNIR cd11020
Cupredoxin domain 1 of Copper-containing nitrite reductase; Copper-containing nitrite ...
52-149 1.73e-03

Cupredoxin domain 1 of Copper-containing nitrite reductase; Copper-containing nitrite reductase (CuNIR), which catalyzes the reduction of NO2- to NO, is the key enzyme in the denitrification process in denitrifying bacteria. CuNIR contains at least one type 1 copper center and a type 2 copper center, which serves as the active site of the enzyme. A histidine, bound to the Type 2 Cu center, is responsible for binding and reducing nitrite. A Cys-His bridge plays an important role in facilitating rapid electron transfer from the type 1 center to the type 2 center. A reduced type I blue copper protein (pseudoazurin) was found to be a specific electron transfer donor for the copper-containing NIR in bacteria Alcaligenes faecalis.


Pssm-ID: 259906 [Multi-domain]  Cd Length: 119  Bit Score: 38.35  E-value: 1.73e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  52 TVNGKFPGPRVTAREGDNLQIKVVNHVSNNI--SIHWHGirqlrsgwADGPSYVTQCPIRMGQSYVYNFTVTgQRGTLWW 129
Cdd:cd11020  25 TFNGQVPGPVIRVREGDTVELTLTNPGTNTMphSIDFHA--------ATGPGGGEFTTIAPGETKTFSFKAL-YPGVFMY 95
                        90       100
                ....*....|....*....|....*...
gi 15227037 130 H-------AHI-QWMratvYGPLIILPK 149
Cdd:cd11020  96 HcatapvlMHIaNGM----YGAIIVEPK 119
CuRO_2_ceruloplasmin_like cd04200
Cupredoxin domains 2, 4, and 6 of ceruloplasmin and similar proteins; This family includes the ...
470-553 1.87e-03

Cupredoxin domains 2, 4, and 6 of ceruloplasmin and similar proteins; This family includes the second, fourth and sixth cupredoxin domains of ceruloplasmin and similar proteins, including the second, fourth, and sixth cupredoxin domains of unprocessed coagulation factors V and VIII. Ceruloplasmin (ferroxidase) is a multicopper oxidase essential for normal iron homeostasis. Ceruloplasmin also functions in copper transport, amine oxidase and as an antioxidant preventing free radicals in serum. The protein has 6 cupredoxin domains and exhibits internal sequence homology that appears to have evolved from the triplication of a sequence unit composed of two tandem cupredoxin domains. Human Factor VIII facilitates blood clotting by acting as a cofactor for factor IXa Factor VIII and IXa forms a complex in the presence of Ca+2 and phospholipids that converts factor X to the activated form Xa.


Pssm-ID: 259863 [Multi-domain]  Cd Length: 141  Bit Score: 38.93  E-value: 1.87e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037 470 GIEAHPIHLHGFNFYVvgqgfgnfnpardpKHYnlvdpvERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTM 549
Cdd:cd04200  78 EVDVHSIHFHGQTFLY--------------KGY------RIDTLTLFPATFETVEMVPSNPGTWLLHCHNSDHRHAGMQA 137

                ....
gi 15227037 550 AWVV 553
Cdd:cd04200 138 YFLV 141
CuRO_3_MCO_like_5 cd13911
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
474-538 2.42e-03

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259978 [Multi-domain]  Cd Length: 119  Bit Score: 38.30  E-value: 2.42e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15227037 474 HPIHLHGFNFYVVGQGFGnfnpARDPKHYNLVDPVE---RNTINipsggwVAIRFlADNPGVWLMHCH 538
Cdd:cd13911  49 HPVHLHGAHFQVVSRTGG----RPGEWDAGWKDTVLlrpRESVT------VIIRF-DGYRGRYVFHCH 105
CuRO_1_ceruloplasmin cd04222
The first cupredoxin domain of Ceruloplasmin; Ceruloplasmin is a multicopper oxidase essential ...
57-149 3.10e-03

The first cupredoxin domain of Ceruloplasmin; Ceruloplasmin is a multicopper oxidase essential for normal iron homeostasis and copper transport in blood. It also functions in amine oxidation and as an antioxidant preventing free radicals in serum. The protein has 6 cupredoxin domains with six copper centers; three mononuclear sites in domain 2, 4 and 6 and three in the form of trinuclear clusters at the interface of domains 1 and 6. Ceruloplasmin exhibits internal sequence homology that appears to have evolved from the triplication of a sequence unit composed of two tandem cupredoxin domains. This model represents the first cupredoxin domain of ceruloplasmin.


Pssm-ID: 259884 [Multi-domain]  Cd Length: 183  Bit Score: 38.94  E-value: 3.10e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  57 FPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSG----WADGPSYVTQC--PIRMGQSYVYNFTVTGQRG----- 125
Cdd:cd04222  73 FLGPILKAEVGDVIVVHLKNFASRPYSLHPHGVFYNKENegalYPDNTSGFEKAddAVPPGGSYTYTWTVPEEQAptkad 152
                        90       100       110
                ....*....|....*....|....*....|.
gi 15227037 126 ----TLWWHAHIQWMR---ATVYGPLIILPK 149
Cdd:cd04222 153 anclTRIYHSHIDAPKdiaSGLIGPLIICKK 183
CuRO_2_ceruloplasmin_like_2 cd11023
cupredoxin domain of ceruloplasmin homologs; Uncharacterized subfamily of ceruloplasmin ...
527-553 7.09e-03

cupredoxin domain of ceruloplasmin homologs; Uncharacterized subfamily of ceruloplasmin homologous proteins. Ceruloplasmin (ferroxidase) is a multicopper oxidase essential for normal iron homeostasis. Ceruloplasmin also functions in copper transport, amine oxidase and as an antioxidant preventing free radicals in serum. The protein has 6 cupredoxin domains and exhibits internal sequence homology that appears to have evolved from the triplication of a sequence unit composed of two tandem cupredoxin domains. This model represents the first domain of the triplicated units.


Pssm-ID: 259909 [Multi-domain]  Cd Length: 118  Bit Score: 36.82  E-value: 7.09e-03
                        10        20
                ....*....|....*....|....*..
gi 15227037 527 ADNPGVWLMHCHIEIHLSWGLTMAWVV 553
Cdd:cd11023  92 AADVGTWLLHCHVHDHYMAGMMTQFAV 118
CuRO_1_2DMCO_NIR_like_2 cd14449
The cupredoxin domain 1 of a two-domain laccase related to nitrite reductase; The two-domain ...
58-149 9.24e-03

The cupredoxin domain 1 of a two-domain laccase related to nitrite reductase; The two-domain laccase (small laccase) in this family differs significantly from all laccases. It resembles the two domain nitrite reductase in both sequence and structure. It consists of two cupredoxin domains and forms trimers, and hence resembles the quaternary structure of nitrite reductases more than that of large laccases. There are three trinuclear copper clusters in the enzyme localized between domains 1 and 2 of each pair of neighbor chains. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic, notably phenolic, and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities. This subfamily has lost the type 1 (T1) copper binding site in domain 1 that is present in other two-domain laccases.


Pssm-ID: 259991 [Multi-domain]  Cd Length: 135  Bit Score: 36.86  E-value: 9.24e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227037  58 PGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPirmGQSYVYNF------------TVTGQRG 125
Cdd:cd14449  28 PGPVIEVREGDTLKILFRNTLDVPASLHPHGVDYTTASDGTGMNASIVAP---GDTRIYTWrthggyrradgsWAEGTAG 104
                        90       100       110
                ....*....|....*....|....*....|.
gi 15227037 126 TLWWHAHI-------QWMRATVYGPLIILPK 149
Cdd:cd14449 105 YWHYHDHVfgtehgtEGLSRGLYGALIVRRV 135
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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