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Conserved domains on  [gi|15227865|ref|NP_179942|]
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methyl esterase 3 [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02211 super family cl26328
methyl indole-3-acetate methyltransferase
1-259 1.88e-58

methyl indole-3-acetate methyltransferase


The actual alignment was detected with superfamily member PLN02211:

Pssm-ID: 215128  Cd Length: 273  Bit Score: 187.02  E-value: 1.88e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865    1 MSEEERKQHVVLVHGACHGAWCWYKVKPQLEASGHRVTAVDLAASGIDMTrSITDISTCEQYSEPLMQLMTSLPDDEKVV 80
Cdd:PLN02211  12 MKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQS-DADSVTTFDEYNKPLIDFLSSLPENEKVI 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865   81 LVGHSLGGLSLAMAMDMFPTKISVSVFVTAMMpdTKHspSFVWDKLRKE-----TSREEWLDTVFtSEKPDFPSEFWIFG 155
Cdd:PLN02211  91 LVGHSAGGLSVTQAIHRFPKKICLAVYVAATM--LKL--GFQTDEDMKDgvpdlSEFGDVYELGF-GLGPDQPPTSAIIK 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865  156 PEFMAKNLYQLSPVQDLELAKMLVRANPLIKKDMAErrsFSEEG--YGSVTRIFIVCGKDLVSPEDYQRSMISNFPPKEV 233
Cdd:PLN02211 166 KEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSAR---FEEETgdIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQV 242
                        250       260
                 ....*....|....*....|....*.
gi 15227865  234 MEIkDADHMPMFSKPQQLCALLLEIA 259
Cdd:PLN02211 243 YEL-ESDHSPFFSTPFLLFGLLIKAA 267
 
Name Accession Description Interval E-value
PLN02211 PLN02211
methyl indole-3-acetate methyltransferase
1-259 1.88e-58

methyl indole-3-acetate methyltransferase


Pssm-ID: 215128  Cd Length: 273  Bit Score: 187.02  E-value: 1.88e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865    1 MSEEERKQHVVLVHGACHGAWCWYKVKPQLEASGHRVTAVDLAASGIDMTrSITDISTCEQYSEPLMQLMTSLPDDEKVV 80
Cdd:PLN02211  12 MKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQS-DADSVTTFDEYNKPLIDFLSSLPENEKVI 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865   81 LVGHSLGGLSLAMAMDMFPTKISVSVFVTAMMpdTKHspSFVWDKLRKE-----TSREEWLDTVFtSEKPDFPSEFWIFG 155
Cdd:PLN02211  91 LVGHSAGGLSVTQAIHRFPKKICLAVYVAATM--LKL--GFQTDEDMKDgvpdlSEFGDVYELGF-GLGPDQPPTSAIIK 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865  156 PEFMAKNLYQLSPVQDLELAKMLVRANPLIKKDMAErrsFSEEG--YGSVTRIFIVCGKDLVSPEDYQRSMISNFPPKEV 233
Cdd:PLN02211 166 KEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSAR---FEEETgdIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQV 242
                        250       260
                 ....*....|....*....|....*.
gi 15227865  234 MEIkDADHMPMFSKPQQLCALLLEIA 259
Cdd:PLN02211 243 YEL-ESDHSPFFSTPFLLFGLLIKAA 267
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
9-248 7.53e-19

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 82.94  E-value: 7.53e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865     9 HVVLVHGACHGAWCWYKVKPQLEASGHRVTAVDLAASGIDMTR-SITDISTCEqYSEPLMQLMTSLPDDeKVVLVGHSLG 87
Cdd:pfam00561   2 PVLLLHGLPGSSDLWRKLAPALARDGFRVIALDLRGFGKSSRPkAQDDYRTDD-LAEDLEYILEALGLE-KVNLVGHSMG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865    88 G-LSLAMAMDmFPTKISVSVFVTAMMPDtkHSPSFVWDKLRKetSREEWLDTVF--TSEKPDFPSE----FWIFGPEFMA 160
Cdd:pfam00561  80 GlIALAYAAK-YPDRVKALVLLGALDPP--HELDEADRFILA--LFPGFFDGFVadFAPNPLGRLVakllALLLLRLRLL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865   161 KNLYQLS---PVQDLELAKMLVRANPLIKKDMAERRSFSEEGYGSVTRIFIVCGKDLVSPEDYQRSMISNFPPKEVMEIK 237
Cdd:pfam00561 155 KALPLLNkrfPSGDYALAKSLVTGALLFIETWSTELRAKFLGRLDEPTLIIWGDQDPLVPPQALEKLAQLFPNARLVVIP 234
                         250
                  ....*....|.
gi 15227865   238 DADHMPMFSKP 248
Cdd:pfam00561 235 DAGHFAFLEGP 245
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
10-261 2.44e-16

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 75.42  E-value: 2.44e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865  10 VVLVHGACHGAWCWYKVKPQLeASGHRVTAVDLAASGidMTRSITDISTCEQYSEPLMQLMTSLpDDEKVVLVGHSLGG- 88
Cdd:COG0596  26 VVLLHGLPGSSYEWRPLIPAL-AAGYRVIAPDLRGHG--RSDKPAGGYTLDDLADDLAALLDAL-GLERVVLVGHSMGGm 101
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865  89 LSLAMAMDmFPTKISVSVFVTAMMpdtkhspSFVWDKLRKETSREEWLDTVFTSEKPDFPSEfwifgpefmaknlyQLSP 168
Cdd:COG0596 102 VALELAAR-HPERVAGLVLVDEVL-------AALAEPLRRPGLAPEALAALLRALARTDLRE--------------RLAR 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865 169 VQdlelAKMLVranplikkdmaerrsfseegygsvtrifIVCGKDLVSPEDYQRSMISNFPPKEVMEIKDADHMPMFSKP 248
Cdd:COG0596 160 IT----VPTLV----------------------------IWGEKDPIVPPALARRLAELLPNAELVVLPGAGHFPPLEQP 207
                       250
                ....*....|...
gi 15227865 249 QQLCALLLEIANK 261
Cdd:COG0596 208 EAFAAALRDFLAR 220
 
Name Accession Description Interval E-value
PLN02211 PLN02211
methyl indole-3-acetate methyltransferase
1-259 1.88e-58

methyl indole-3-acetate methyltransferase


Pssm-ID: 215128  Cd Length: 273  Bit Score: 187.02  E-value: 1.88e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865    1 MSEEERKQHVVLVHGACHGAWCWYKVKPQLEASGHRVTAVDLAASGIDMTrSITDISTCEQYSEPLMQLMTSLPDDEKVV 80
Cdd:PLN02211  12 MKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQS-DADSVTTFDEYNKPLIDFLSSLPENEKVI 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865   81 LVGHSLGGLSLAMAMDMFPTKISVSVFVTAMMpdTKHspSFVWDKLRKE-----TSREEWLDTVFtSEKPDFPSEFWIFG 155
Cdd:PLN02211  91 LVGHSAGGLSVTQAIHRFPKKICLAVYVAATM--LKL--GFQTDEDMKDgvpdlSEFGDVYELGF-GLGPDQPPTSAIIK 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865  156 PEFMAKNLYQLSPVQDLELAKMLVRANPLIKKDMAErrsFSEEG--YGSVTRIFIVCGKDLVSPEDYQRSMISNFPPKEV 233
Cdd:PLN02211 166 KEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSAR---FEEETgdIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQV 242
                        250       260
                 ....*....|....*....|....*.
gi 15227865  234 MEIkDADHMPMFSKPQQLCALLLEIA 259
Cdd:PLN02211 243 YEL-ESDHSPFFSTPFLLFGLLIKAA 267
PLN02965 PLN02965
Probable pheophorbidase
9-260 1.06e-54

Probable pheophorbidase


Pssm-ID: 178549 [Multi-domain]  Cd Length: 255  Bit Score: 177.03  E-value: 1.06e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865    9 HVVLVHGACHGAWCWYKVKPQLEASGHRVTAVDLAASGIDMTRSITdISTCEQYSEPLMQLMTSLPDDEKVVLVGHSLGG 88
Cdd:PLN02965   5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNT-VSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865   89 LSLAMAMDMFPTKISVSVFVTAMM--PDTKHSPsfvwDKLRKETSREEWLDTVFtSEKPDFPSEFWIFGPEFMAKNLYQL 166
Cdd:PLN02965  84 GSVTEALCKFTDKISMAIYVAAAMvkPGSIISP----RLKNVMEGTEKIWDYTF-GEGPDKPPTGIMMKPEFVRHYYYNQ 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865  167 SPVQDLELAKMLVRANPLIK-KDMAERRSFSEEGYgsVTRIFIVCGKDLVSPEDYQRSMISNFPPKEVMEIKDADHMPMF 245
Cdd:PLN02965 159 SPLEDYTLSSKLLRPAPVRAfQDLDKLPPNPEAEK--VPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFF 236
                        250
                 ....*....|....*
gi 15227865  246 SKPQQLCALLLEIAN 260
Cdd:PLN02965 237 SVPTTLFQYLLQAVS 251
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
9-248 7.53e-19

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 82.94  E-value: 7.53e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865     9 HVVLVHGACHGAWCWYKVKPQLEASGHRVTAVDLAASGIDMTR-SITDISTCEqYSEPLMQLMTSLPDDeKVVLVGHSLG 87
Cdd:pfam00561   2 PVLLLHGLPGSSDLWRKLAPALARDGFRVIALDLRGFGKSSRPkAQDDYRTDD-LAEDLEYILEALGLE-KVNLVGHSMG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865    88 G-LSLAMAMDmFPTKISVSVFVTAMMPDtkHSPSFVWDKLRKetSREEWLDTVF--TSEKPDFPSE----FWIFGPEFMA 160
Cdd:pfam00561  80 GlIALAYAAK-YPDRVKALVLLGALDPP--HELDEADRFILA--LFPGFFDGFVadFAPNPLGRLVakllALLLLRLRLL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865   161 KNLYQLS---PVQDLELAKMLVRANPLIKKDMAERRSFSEEGYGSVTRIFIVCGKDLVSPEDYQRSMISNFPPKEVMEIK 237
Cdd:pfam00561 155 KALPLLNkrfPSGDYALAKSLVTGALLFIETWSTELRAKFLGRLDEPTLIIWGDQDPLVPPQALEKLAQLFPNARLVVIP 234
                         250
                  ....*....|.
gi 15227865   238 DADHMPMFSKP 248
Cdd:pfam00561 235 DAGHFAFLEGP 245
Abhydrolase_6 pfam12697
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ...
10-254 3.65e-17

Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.


Pssm-ID: 463673 [Multi-domain]  Cd Length: 211  Bit Score: 77.51  E-value: 3.65e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865    10 VVLVHGACHGAWCWykvkPQLEASGHRVTAVDLAASGiDMTRSITDISTCEQYSEplmqLMTSLPDDEKVVLVGHSLGGl 89
Cdd:pfam12697   1 VVLVHGAGLSAAPL----AALLAAGVAVLAPDLPGHG-SSSPPPLDLADLADLAA----LLDELGAARPVVLVGHSLGG- 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865    90 slAMAMDMFPTKISVSVFVTAMMPDTKHSPSF--VWDKLRKETSREEWLDTVFtsekpdfpsefwiFGPEFMAKnlyqls 167
Cdd:pfam12697  71 --AVALAAAAAALVVGVLVAPLAAPPGLLAALlaLLARLGAALAAPAWLAAES-------------LARGFLDD------ 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865   168 PVQDLELAKMLVRANPLikkdMAERRSFSEEGYGSV-TRIFIVCGKDLVSPEDYQRSMiSNFPPKEVMEIKDADHMPMFS 246
Cdd:pfam12697 130 LPADAEWAAALARLAAL----LAALALLPLAAWRDLpVPVLVLAEEDRLVPELAQRLL-AALAGARLVVLPGAGHLPLDD 204

                  ....*...
gi 15227865   247 kPQQLCAL 254
Cdd:pfam12697 205 -PEEVAEA 211
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
10-261 2.44e-16

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 75.42  E-value: 2.44e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865  10 VVLVHGACHGAWCWYKVKPQLeASGHRVTAVDLAASGidMTRSITDISTCEQYSEPLMQLMTSLpDDEKVVLVGHSLGG- 88
Cdd:COG0596  26 VVLLHGLPGSSYEWRPLIPAL-AAGYRVIAPDLRGHG--RSDKPAGGYTLDDLADDLAALLDAL-GLERVVLVGHSMGGm 101
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865  89 LSLAMAMDmFPTKISVSVFVTAMMpdtkhspSFVWDKLRKETSREEWLDTVFTSEKPDFPSEfwifgpefmaknlyQLSP 168
Cdd:COG0596 102 VALELAAR-HPERVAGLVLVDEVL-------AALAEPLRRPGLAPEALAALLRALARTDLRE--------------RLAR 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865 169 VQdlelAKMLVranplikkdmaerrsfseegygsvtrifIVCGKDLVSPEDYQRSMISNFPPKEVMEIKDADHMPMFSKP 248
Cdd:COG0596 160 IT----VPTLV----------------------------IWGEKDPIVPPALARRLAELLPNAELVVLPGAGHFPPLEQP 207
                       250
                ....*....|...
gi 15227865 249 QQLCALLLEIANK 261
Cdd:COG0596 208 EAFAAALRDFLAR 220
EstA COG1075
Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and ...
5-89 3.52e-12

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism];


Pssm-ID: 440693 [Multi-domain]  Cd Length: 106  Bit Score: 61.38  E-value: 3.52e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865   5 ERKQHVVLVHGACHGAWCWYKVKPQLEASGHRVTAVDLAASGIDMtrsitdistcEQYSEPLMQLMTSL---PDDEKVVL 81
Cdd:COG1075   3 ATRYPVVLVHGLGGSAASWAPLAPRLRAAGYPVYALNYPSTNGSI----------EDSAEQLAAFVDAVlaaTGAEKVDL 72

                ....*...
gi 15227865  82 VGHSLGGL 89
Cdd:COG1075  73 VGHSMGGL 80
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
3-250 9.47e-12

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 62.71  E-value: 9.47e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865   3 EEERKQHVVLVHGACHGAWCWYKVKPQLEASGHRVTAVDLAASGiDMTRSITDISTCEQYSEPLMQLMTSL--PDDEKVV 80
Cdd:COG2267  24 AGSPRGTVVLVHGLGEHSGRYAELAEALAAAGYAVLAFDLRGHG-RSDGPRGHVDSFDDYVDDLRAALDALraRPGLPVV 102
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865  81 LVGHSLGGLSLAMAMDMFPTKISVSVFVtammpdtkhSPSFVWDKLRKETSReeWLdtvftsekpdfpsefwifgpefma 160
Cdd:COG2267 103 LLGHSMGGLIALLYAARYPDRVAGLVLL---------APAYRADPLLGPSAR--WL------------------------ 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15227865 161 knlyqlspvQDLELAKMLVRANplikkdmaerrsfseegygsvTRIFIVCG-KDLVSPEDYQRSMISNFPP-KEVMEIKD 238
Cdd:COG2267 148 ---------RALRLAEALARID---------------------VPVLVLHGgADRVVPPEAARRLAARLSPdVELVLLPG 197
                       250
                ....*....|..
gi 15227865 239 ADHMPMFSKPQQ 250
Cdd:COG2267 198 ARHELLNEPARE 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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