|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00026 |
PLN00026 |
aquaporin NIP; Provisional |
1-305 |
0e+00 |
|
aquaporin NIP; Provisional
Pssm-ID: 177663 [Multi-domain] Cd Length: 298 Bit Score: 502.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 1 MDHEEIPSTPSTPATtPGTPGAPLFGGFEGKRNGhngrYTPKSLLKSCKCFSVDnewALEDGRLPPVTCSLPPPNVSLYR 80
Cdd:PLN00026 1 MDNEEVPSAPSTPAT-PGTPGGPLFGGFRVDSLS----YGDRKLLPSCKCFPVE---ALEWGRLPTCFCDLPPPDVSLTR 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 81 KLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVY 160
Cdd:PLN00026 73 KLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 161 IGAQVMASVSAAFALKAVFEPTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILI 240
Cdd:PLN00026 153 IAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILV 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15220826 241 AGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKLPEEDEAPKER-RSFRR 305
Cdd:PLN00026 233 AGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPPRPvRSFRR 298
|
|
| GlpF |
COG0580 |
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) ... |
77-288 |
6.88e-62 |
|
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) [Carbohydrate transport and metabolism];
Pssm-ID: 440345 [Multi-domain] Cd Length: 232 Bit Score: 196.12 E-value: 6.88e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 77 SLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKH 156
Cdd:COG0580 1 SLMKRLLAEFLGTFILVLLGCGVVAVLAGTKGGIGWLGIALAWGLAVLAGVYAFGHISGAHLNPAVTLALAVAGRFPWKD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 157 VPVYIGAQVMASVSAAFALKAVF--------EPTMSGGV--TVPTVGLS--QAFALEFIISFNLMFVVTAVATDTRAVGE 224
Cdd:COG0580 81 VLPYIIAQLLGAFLGAALVYLIYgghfdateDGGAKLGVfaTSPAIGYSlgAAFLTEIIGTFVLVFVILGITDKRAAPGG 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 225 LAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAA------NNYRAIWVYLTAPILGALIGAGTYTIV 288
Cdd:COG0580 161 LAPLAIGLLVAAIGLSLGPLTGYAINPARDLGPRLFHalgkggSDWGYLWVPIVAPILGAALAALLYRAL 230
|
|
| MIP |
cd00333 |
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane ... |
80-288 |
7.78e-55 |
|
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Pssm-ID: 238204 Cd Length: 228 Bit Score: 177.83 E-value: 7.78e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 80 RKLGAEFVGTLILIFAGTATAIVNQKTDGAE-TLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVP 158
Cdd:cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASgGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 159 VYIGAQVMASVSAAFALKAVFEP-------------TMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTR--AVG 223
Cdd:cd00333 81 PYIIAQLLGAILGAALLYGLYYGlyleflgannivaGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNgpPPG 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15220826 224 ELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAI---WVYLTAPILGALIGAGTYTIV 288
Cdd:cd00333 161 GLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWhyfWVYWVGPLIGAIAGALVYDYV 228
|
|
| MIP |
pfam00230 |
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two ... |
76-285 |
3.21e-50 |
|
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators.
Pssm-ID: 395174 [Multi-domain] Cd Length: 223 Bit Score: 165.57 E-value: 3.21e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 76 VSLYRKLGAEFVGTLILIFAGTATAI-VNQKT--DGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHF 152
Cdd:pfam00230 5 VSFLRAVIAEFLATLLFVFFGVGSALgVKKLVssLAVSGLLAVALAFGLALATLVYCAGHISGAHLNPAVTLALLVGRRF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 153 PWKHVPVYIGAQVMASVSAAFALKAVFEPTM--SGGVTVPTVGLS--QAFALEFIISFNLMFVVTAVATDTRAV--GELA 226
Cdd:pfam00230 85 SLLRAIFYIVAQLLGAIAGAALLYGVTVGLQraGLFANTLAPGVNagQAFVVEIILTFQLVYCVFATTDDRRNGslGTVA 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 15220826 227 GIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTY 285
Cdd:pfam00230 165 PLAIGFAVFLNHLAGGPYTGASMNPARSFGPAVVLWKWDDHWVYWVGPFIGAALGALVY 223
|
|
| MIP |
TIGR00861 |
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is ... |
84-285 |
9.52e-49 |
|
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273306 [Multi-domain] Cd Length: 216 Bit Score: 161.70 E-value: 9.52e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 84 AEFVGTLILIFAGTATAIVNQKTD-----GAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVP 158
Cdd:TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGaygavGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 159 VYIGAQVMASVSAAFALKAVFEPTMSGG---VTVPTVGLS--QAFALEFIISFNLMFVVTAVATDTRAV--GELAGIAVG 231
Cdd:TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNlavNGSASAGVSsgQAFFVEFIGTAILVLVIFATTDDRNRVprGGFAPLAIG 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 15220826 232 ATVMLNILIAGPATSASMNPVRTLGPAIAAN--NYRAIWVYLTAPILGALIGAGTY 285
Cdd:TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGlaGWGNHWVYWVGPIIGAILGALVY 216
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00026 |
PLN00026 |
aquaporin NIP; Provisional |
1-305 |
0e+00 |
|
aquaporin NIP; Provisional
Pssm-ID: 177663 [Multi-domain] Cd Length: 298 Bit Score: 502.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 1 MDHEEIPSTPSTPATtPGTPGAPLFGGFEGKRNGhngrYTPKSLLKSCKCFSVDnewALEDGRLPPVTCSLPPPNVSLYR 80
Cdd:PLN00026 1 MDNEEVPSAPSTPAT-PGTPGGPLFGGFRVDSLS----YGDRKLLPSCKCFPVE---ALEWGRLPTCFCDLPPPDVSLTR 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 81 KLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVY 160
Cdd:PLN00026 73 KLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 161 IGAQVMASVSAAFALKAVFEPTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILI 240
Cdd:PLN00026 153 IAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILV 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15220826 241 AGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKLPEEDEAPKER-RSFRR 305
Cdd:PLN00026 233 AGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPPRPvRSFRR 298
|
|
| PLN00184 |
PLN00184 |
aquaporin NIP1; Provisional |
70-289 |
1.15e-71 |
|
aquaporin NIP1; Provisional
Pssm-ID: 177778 Cd Length: 296 Bit Score: 223.36 E-value: 1.15e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 70 SLPPPNVSLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAAL 149
Cdd:PLN00184 45 SLLSVSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASC 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 150 KHFPWKHVPVYIGAQVMASVSAAFALKAVF---EPTMSGGV-----TVPTVGLSQAFALEFIISFNLMFVVTAVATDTRA 221
Cdd:PLN00184 125 GRFPLKQVPAYVISQVIGSTLAAATLRLLFgldHDVCSGKHdvfigSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRA 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15220826 222 VGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVK 289
Cdd:PLN00184 205 IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVR 272
|
|
| PLN00182 |
PLN00182 |
putative aquaporin NIP4; Provisional |
69-289 |
1.11e-70 |
|
putative aquaporin NIP4; Provisional
Pssm-ID: 165748 Cd Length: 283 Bit Score: 220.17 E-value: 1.11e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 69 CSLPPPNVSLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAA 148
Cdd:PLN00182 32 ICTSPSIVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAI 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 149 LKHFPWKHVPVYIGAQVMASVSAAFALKAVFEPTMSGGV-TVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAVGELAG 227
Cdd:PLN00182 112 FRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFgTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGELAG 191
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15220826 228 IAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVK 289
Cdd:PLN00182 192 IAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIR 253
|
|
| GlpF |
COG0580 |
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) ... |
77-288 |
6.88e-62 |
|
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) [Carbohydrate transport and metabolism];
Pssm-ID: 440345 [Multi-domain] Cd Length: 232 Bit Score: 196.12 E-value: 6.88e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 77 SLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKH 156
Cdd:COG0580 1 SLMKRLLAEFLGTFILVLLGCGVVAVLAGTKGGIGWLGIALAWGLAVLAGVYAFGHISGAHLNPAVTLALAVAGRFPWKD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 157 VPVYIGAQVMASVSAAFALKAVF--------EPTMSGGV--TVPTVGLS--QAFALEFIISFNLMFVVTAVATDTRAVGE 224
Cdd:COG0580 81 VLPYIIAQLLGAFLGAALVYLIYgghfdateDGGAKLGVfaTSPAIGYSlgAAFLTEIIGTFVLVFVILGITDKRAAPGG 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 225 LAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAA------NNYRAIWVYLTAPILGALIGAGTYTIV 288
Cdd:COG0580 161 LAPLAIGLLVAAIGLSLGPLTGYAINPARDLGPRLFHalgkggSDWGYLWVPIVAPILGAALAALLYRAL 230
|
|
| PLN00183 |
PLN00183 |
putative aquaporin NIP7; Provisional |
69-290 |
6.64e-59 |
|
putative aquaporin NIP7; Provisional
Pssm-ID: 215092 Cd Length: 274 Bit Score: 189.68 E-value: 6.64e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 69 CSLPPPNVSLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAA 148
Cdd:PLN00183 35 CLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFAT 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 149 LKHFPWKHVPVYIGAQVMASVSAAFALKAVFEPTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAVGELAGI 228
Cdd:PLN00183 115 FGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKADLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGF 194
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15220826 229 AVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKL 290
Cdd:PLN00183 195 VIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRL 256
|
|
| MIP |
cd00333 |
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane ... |
80-288 |
7.78e-55 |
|
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Pssm-ID: 238204 Cd Length: 228 Bit Score: 177.83 E-value: 7.78e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 80 RKLGAEFVGTLILIFAGTATAIVNQKTDGAE-TLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVP 158
Cdd:cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASgGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 159 VYIGAQVMASVSAAFALKAVFEP-------------TMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTR--AVG 223
Cdd:cd00333 81 PYIIAQLLGAILGAALLYGLYYGlyleflgannivaGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNgpPPG 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15220826 224 ELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAI---WVYLTAPILGALIGAGTYTIV 288
Cdd:cd00333 161 GLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWhyfWVYWVGPLIGAIAGALVYDYV 228
|
|
| MIP |
pfam00230 |
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two ... |
76-285 |
3.21e-50 |
|
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators.
Pssm-ID: 395174 [Multi-domain] Cd Length: 223 Bit Score: 165.57 E-value: 3.21e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 76 VSLYRKLGAEFVGTLILIFAGTATAI-VNQKT--DGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHF 152
Cdd:pfam00230 5 VSFLRAVIAEFLATLLFVFFGVGSALgVKKLVssLAVSGLLAVALAFGLALATLVYCAGHISGAHLNPAVTLALLVGRRF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 153 PWKHVPVYIGAQVMASVSAAFALKAVFEPTM--SGGVTVPTVGLS--QAFALEFIISFNLMFVVTAVATDTRAV--GELA 226
Cdd:pfam00230 85 SLLRAIFYIVAQLLGAIAGAALLYGVTVGLQraGLFANTLAPGVNagQAFVVEIILTFQLVYCVFATTDDRRNGslGTVA 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 15220826 227 GIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTY 285
Cdd:pfam00230 165 PLAIGFAVFLNHLAGGPYTGASMNPARSFGPAVVLWKWDDHWVYWVGPFIGAALGALVY 223
|
|
| MIP |
TIGR00861 |
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is ... |
84-285 |
9.52e-49 |
|
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273306 [Multi-domain] Cd Length: 216 Bit Score: 161.70 E-value: 9.52e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 84 AEFVGTLILIFAGTATAIVNQKTD-----GAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVP 158
Cdd:TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGaygavGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 159 VYIGAQVMASVSAAFALKAVFEPTMSGG---VTVPTVGLS--QAFALEFIISFNLMFVVTAVATDTRAV--GELAGIAVG 231
Cdd:TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNlavNGSASAGVSsgQAFFVEFIGTAILVLVIFATTDDRNRVprGGFAPLAIG 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 15220826 232 ATVMLNILIAGPATSASMNPVRTLGPAIAAN--NYRAIWVYLTAPILGALIGAGTY 285
Cdd:TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGlaGWGNHWVYWVGPIIGAILGALVY 216
|
|
| PRK05420 |
PRK05420 |
aquaporin Z; Provisional |
78-285 |
2.95e-31 |
|
aquaporin Z; Provisional
Pssm-ID: 235453 [Multi-domain] Cd Length: 231 Bit Score: 116.61 E-value: 2.95e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 78 LYRKLGAEFVGTLILIFAGTATAIVNQKTDGAET-LIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKH 156
Cdd:PRK05420 1 MFKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIgFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 157 VPVYIGAQVMASVSAAFAL------KAVFEPTMSG------GVTVP-TVGLSQAFALEFIISFNLMFVVTAvATDTRAVG 223
Cdd:PRK05420 81 LVPYIIAQVVGGIAAAAVLyliasgKAGFDLAGSGfasngyGEHSPgGYSLLAALVCEVVLTAFFLLVILG-ATDKRAPA 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15220826 224 ELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNY--RAIWVYLTAPILGALIGAGTY 285
Cdd:PRK05420 160 GFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWalEQLWLFWVAPIVGAIIGGLIY 223
|
|
| PTZ00016 |
PTZ00016 |
aquaglyceroporin; Provisional |
53-285 |
1.24e-30 |
|
aquaglyceroporin; Provisional
Pssm-ID: 240230 [Multi-domain] Cd Length: 294 Bit Score: 116.76 E-value: 1.24e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 53 VDNEWALEDGRLPPVTCSLPPPNV-SLYRKLGAEFVGTLILIFAGTAtAIVNQKTDGAE-TLIGCAASAGLAVMIVILST 130
Cdd:PTZ00016 23 MDEEVAEAQKRPPGGQNFWAPREYrPNVREYVAEFLGTFVLLFFGEG-VVATTHTVGNNgDYLAITIGWGLGVTFGLLVS 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 131 GHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFE-------------PTMSGG-----VTVPTV 192
Cdd:PTZ00016 102 AGISGGHLNPAVTLGNAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYgffkdhgipelpwETMANGfagvfATYPRE 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 193 GLSQAFALEFIISFNLMFVVTAV--ATDTRAVGELAgIAVGATVMLNILIAGPATSASMNPVRTLGPAI----------- 259
Cdd:PTZ00016 182 GNFYAIFSELILTAILLLVILAItdPNNCPAFNYLP-VAVGLLVFVIGISFGGNTGYALNPARDLGPRLfsailwgsevf 260
|
250 260
....*....|....*....|....*..
gi 15220826 260 -AANNYraIWVYLTAPILGALIGAGTY 285
Cdd:PTZ00016 261 tKDNYY--FWVPLVAPFVGAVLGMFLY 285
|
|
| PLN00166 |
PLN00166 |
aquaporin TIP2; Provisional |
84-285 |
4.57e-28 |
|
aquaporin TIP2; Provisional
Pssm-ID: 165733 Cd Length: 250 Bit Score: 108.87 E-value: 4.57e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 84 AEFVGTLILIFAGTATAIVNQK--TDGA---ETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVP 158
Cdd:PLN00166 23 SEFIATLLFVFAGVGSAIAFAKltSDAAldpAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITIITGF 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 159 VYIGAQVMASVSAAFALKAVfeptmSGGVTVPTVGLS------QAFALEFIISFNLMFVVTAVATDTR--AVGELAGIAV 230
Cdd:PLN00166 103 FYWIAQCLGSIVACLLLVFV-----TNGESVPTHGVAaglgaiEGVVMEIVVTFALVYTVYATAADPKkgSLGTIAPIAI 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 15220826 231 GATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTY 285
Cdd:PLN00166 178 GFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIY 232
|
|
| PLN00027 |
PLN00027 |
aquaporin TIP; Provisional |
84-288 |
3.33e-26 |
|
aquaporin TIP; Provisional
Pssm-ID: 177664 Cd Length: 252 Bit Score: 103.71 E-value: 3.33e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 84 AEFVGTLILIFAGTATAIV-NQKTDGAET----LIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVP 158
Cdd:PLN00027 25 AEFISTLIFVFAGEGSGMAfNKLTDNGSTtpagLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGI 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 159 VYIGAQVMASVSAAFALKAVfeptmSGGVTVPTVGLS------QAFALEFIISFNLMFVVTAVATDTR--AVGELAGIAV 230
Cdd:PLN00027 105 LYWIAQLLGSVVACLLLKFS-----TGGLETSAFSLSsgvgvwNAFVFEIVMTFGLVYTVYATAVDPKkgDLGIIAPIAI 179
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 15220826 231 GATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIV 288
Cdd:PLN00027 180 GFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELI 237
|
|
| PLN00167 |
PLN00167 |
aquaporin TIP5; Provisional |
84-295 |
1.02e-17 |
|
aquaporin TIP5; Provisional
Pssm-ID: 215085 Cd Length: 256 Bit Score: 80.72 E-value: 1.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 84 AEFVGTLILIFAGTATAIVNQK-----TDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVP 158
Cdd:PLN00167 27 AEFISTFFFVFAAVGSAMSSRKlmpdaASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGHISVPTAM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 159 VYIGAQVMASVSAAFALKAVfeptmSGGVTVPTVGLSQ------AFALEFIISFNLMFVVTAVATDTRA-VGELAGIAVG 231
Cdd:PLN00167 107 FYWISQMLASVMACLFLKVT-----TVGQHVPTYKIAEemtgfgASVLEGVLTFGLVYTVYAAGDPRRGlLGAIGPLAIG 181
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15220826 232 ATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKLPEEDE 295
Cdd:PLN00167 182 LVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDD 245
|
|
| MIP |
cd00333 |
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane ... |
69-173 |
1.61e-08 |
|
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Pssm-ID: 238204 Cd Length: 228 Bit Score: 54.18 E-value: 1.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 69 CSLPPPNVSLYRKLGAEFVGTLILIFAGTATAIvnqKTDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTI--AF 146
Cdd:cd00333 120 GTYPSPGVSNGNAFFVEFIGTFILVLVVFATTD---DPNGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLgpAL 196
|
90 100
....*....|....*....|....*..
gi 15220826 147 AALKHFPWKHVPVYIGAQVMASVSAAF 173
Cdd:cd00333 197 FTGLARHWHYFWVYWVGPLIGAIAGAL 223
|
|
| MIP |
TIGR00861 |
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is ... |
70-173 |
4.04e-04 |
|
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273306 [Multi-domain] Cd Length: 216 Bit Score: 40.74 E-value: 4.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220826 70 SLPPPNVSLYRKLGAEFVGTLILIFAGTATAIVNQKTDGAETligCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAAL 149
Cdd:TIGR00861 113 GSASAGVSSGQAFFVEFIGTAILVLVIFATTDDRNRVPRGGF---APLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALF 189
|
90 100
....*....|....*....|....*
gi 15220826 150 KHF-PWKHVPVYIGAQVMASVSAAF 173
Cdd:TIGR00861 190 AGLaGWGNHWVYWVGPIIGAILGAL 214
|
|
| |
