|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
280-730 |
3.32e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 77.29 E-value: 3.32e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 280 AEPERP-----PSRSFEGSSHRTPSTELTWASKPtPVSEPVRHSELVPWQYSEPARQYQLSSRSSEAaqlsllPSVSDSS 354
Cdd:PHA03247 2593 PQSARPrapvdDRGDPRGPAPPSPLPPDTHAPDP-PPPSPSPAANEPDPHPPPTVPPPERPRDDPAP------GRVSRPR 2665
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 355 HASQPTRSNQshAVSKPQPVSKPHPPFPMSQPPPTSNPFPlsqPPSNSKPFPMSQSSQNSKPfPVSQSSQKSKPLLVSQS 434
Cdd:PHA03247 2666 RARRLGRAAQ--ASSPPQRPRRRAARPTVGSLTSLADPPP---PPPTPEPAPHALVSATPLP-PGPAAARQASPALPAAP 2739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 435 SQRSKP----LPVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASnpfpvsqPRPNSQPFSMSQPSSTARPFPAsqPPAAS 510
Cdd:PHA03247 2740 APPAVPagpaTPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRL-------TRPAVASLSESRESLPSPWDPA--DPPAA 2810
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 511 KSFPISQPPTTSKPFVSQPPNTSkPMPVSqPPTTSKPLPVSQPPP-------TFQSTCPSQPPAASSSLSPLPPVFN--- 580
Cdd:PHA03247 2811 VLAPAAALPPAASPAGPLPPPTS-AQPTA-PPPPPGPPPPSLPLGgsvapggDVRRRPPSRSPAAKPAAPARPPVRRlar 2888
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 581 -----STQSFQSPPVST----TPSAVPEASTIPSPPAPAPVAQPTHVFNQTPPPEQTPKSGAARTDSEPEVSSFWTTcpy 651
Cdd:PHA03247 2889 pavsrSTESFALPPDQPerppQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLG--- 2965
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30696783 652 CYVLYEYPiiyeesVLKCQTKSCRRAYQAVKVPSPPPVAEEDSYYCCWGfYPIGFSEVVTKIPVTGLHTKIPVSDLPKS 730
Cdd:PHA03247 2966 ALVPGRVA------VPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWA-SSLALHEETDPPPVSLKQTLWPPDDTEDS 3037
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
356-644 |
1.24e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.18 E-value: 1.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 356 ASQPTRSNQShaVSKPQPVSKPHPPFPMSQPPPTSNPfplsqPPSNSKPFPMSQSSQNSKPFPVSQSSQKSKPLLVSQSS 435
Cdd:PHA03247 2558 AAPPAAPDRS--VPPPRPAPRPSEPAVTSRARRPDAP-----PQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 436 QRSKPLPVSQSLQNSNPfPVSQPSSNSKPFPVSQPQPASNPF-------PVSQPRPNSQPFSMSQPSSTARP-----FPA 503
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVP-PPERPRDDPAPGRVSRPRRARRLGraaqassPPQRPRRRAARPTVGSLTSLADPpppppTPE 2709
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 504 SQPPAASKSFPIsqPPTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQP--PPT----FQSTCPSQPPAASSSLSPLPP 577
Cdd:PHA03247 2710 PAPHALVSATPL--PPGPAAARQASPALPAAPAPPAVPAGPATPGGPARParPPTtagpPAPAPPAAPAAGPPRRLTRPA 2787
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30696783 578 VFNSTQSFQSPPVSTTPSAVPEASTIPSPPAPAPVAQPThvfnqTPPPEQTPKSGAARTDSEPEVSS 644
Cdd:PHA03247 2788 VASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAG-----PLPPPTSAQPTAPPPPPGPPPPS 2849
|
|
| DnaJ |
pfam00226 |
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ... |
81-143 |
5.11e-08 |
|
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.
Pssm-ID: 395170 [Multi-domain] Cd Length: 63 Bit Score: 50.16 E-value: 5.11e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30696783 81 DWYAVLRLVRLThNPELVATQYSRLAVLLNPSRNR-YPYSEQAFRLISDAWYVLSDPSRKTLYD 143
Cdd:pfam00226 1 DYYEILGVSPDA-SDEEIKKAYRKLALKYHPDKNPgDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
405-601 |
2.00e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 54.50 E-value: 2.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 405 FPMSQSSQNSKPFPVSQSSqkskpllVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKPFPV-----SQPQPASNPFPV 479
Cdd:PRK12323 363 FRPGQSGGGAGPATAAAAP-------VAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAvaaapARRSPAPEALAA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 480 SQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPPPTFQS 559
Cdd:PRK12323 436 ARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPD 515
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 30696783 560 TCPSQPPAASsslSPLPPVFNSTQSFQSPPVSTTPSAVPEAS 601
Cdd:PRK12323 516 AAPAGWVAES---IPDPATADPDDAFETLAPAPAAAPAPRAA 554
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
313-564 |
3.54e-07 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 53.89 E-value: 3.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 313 EPVRHSELVPwqysePARQYQLSSRSSEAAQLSLLPSVSDSSHASQPTRSNQShAVSKPQPVSKPHPPFPMSQPPPTSNP 392
Cdd:pfam09770 98 EQVRFNRQQP-----AARAAQSSAQPPASSLPQYQYASQQSQQPSKPVRTGYE-KYKEPEPIPDLQVDASLWGVAPKKAA 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 393 FPLSQPPSnsKPFPMSQSSQNSKPFPV-------SQSSQKSKPLLVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKPF 465
Cdd:pfam09770 172 APAPAPQP--AAQPASLPAPSRKMMSLeeveaamRAQAKKPAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQQ 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 466 PVSQPQPASNPFPVSQ-PRPNSQPFSMSQPSSTARPFPASQPPAASKSFP--ISQPPTTSKPFVSQPPNTSKPMPVSQPP 542
Cdd:pfam09770 250 PQQPQQHPGQGHPVTIlQRPQSPQPDPAQPSIQPQAQQFHQQPPPVPVQPtqILQNPNRLSAARVGYPQNPQPGVQPAPA 329
|
250 260
....*....|....*....|..
gi 30696783 543 TTSKPLPVSQPPPTFQSTCPSQ 564
Cdd:pfam09770 330 HQAHRQQGSFGRQAPIITHPQQ 351
|
|
| PRK14298 |
PRK14298 |
chaperone protein DnaJ; Provisional |
81-155 |
5.02e-07 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184612 [Multi-domain] Cd Length: 377 Bit Score: 52.54 E-value: 5.02e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30696783 81 DWYAVLRLVRLTHNPELVATqYSRLAVLLNPSRNRYPYSEQAFRLISDAWYVLSDPSRKTLYDRelhlsqFGQLG 155
Cdd:PRK14298 6 DYYEILGLSKDASVEDIKKA-YRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDR------FGHAG 73
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
371-650 |
8.92e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 8.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 371 PQPVSKPHPPFPMSQPPPTSNPFPlSQPPSNSKPFPMSQSSQNSKP-FPVSQSSQKSKPLLVSQSSQRSKPLPVSQSLQN 449
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVPPPRPAPRP-SEPAVTSRARRPDAPPQSARPrAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPS 2632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 450 SNPFPVSQPSSNSKPfPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTA-RPFPASQPPAASKSFPISQPPTTSKPFVSQ 528
Cdd:PHA03247 2633 PAANEPDPHPPPTVP-PPERPRDDPAPGRVSRPRRARRLGRAAQASSPPqRPRRRAARPTVGSLTSLADPPPPPPTPEPA 2711
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 529 PPNTSKPMPVsqPPTTSKPLPVSQPPPtfqsTCPSQPPAASSSLSPLPPVFNSTQSFQSPPVSTTPSAVPEAstipsppa 608
Cdd:PHA03247 2712 PHALVSATPL--PPGPAAARQASPALP----AAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAA-------- 2777
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 30696783 609 papvaqpthvfnqTPPPEQTPKSGAARTDSEPEVSSFWTTCP 650
Cdd:PHA03247 2778 -------------GPPRRLTRPAVASLSESRESLPSPWDPAD 2806
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
453-644 |
1.02e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.19 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 453 FPVSQPSSNSKPFPVSQPqPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNT 532
Cdd:PRK12323 363 FRPGQSGGGAGPATAAAA-PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASA 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 533 SKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPPVFNSTQSFQSPPVSTTPSAVPEAStipspPAPAPV 612
Cdd:PRK12323 442 RGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPA-----PAQPDA 516
|
170 180 190
....*....|....*....|....*....|..
gi 30696783 613 AQPTHVFNQTPPPEQTPKSGAARTDSEPEVSS 644
Cdd:PRK12323 517 APAGWVAESIPDPATADPDDAFETLAPAPAAA 548
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
393-595 |
1.66e-06 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 51.58 E-value: 1.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 393 FPLSQPPSNSKPFPMSQSSQN--SKPFPVSQSSQKSKPLLVS-QSSQRSKPLP---VSQSLQNSNPfpvsqpssnsKPFP 466
Cdd:pfam09770 102 FNRQQPAARAAQSSAQPPASSlpQYQYASQQSQQPSKPVRTGyEKYKEPEPIPdlqVDASLWGVAP----------KKAA 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 467 VSQPQPASNPFPVSQPRPNSQPFSM----SQPSSTARPfpASQPPAAS-KSFPISQPPTTSKPFVSQPPNTSKPMPVSQP 541
Cdd:pfam09770 172 APAPAPQPAAQPASLPAPSRKMMSLeeveAAMRAQAKK--PAQQPAPApAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQQ 249
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 30696783 542 PTTSKPLPVSQPPPTfQSTCPSQPPAASSSLSPLPPVFNSTQsfQSPPVSTTPS 595
Cdd:pfam09770 250 PQQPQQHPGQGHPVT-ILQRPQSPQPDPAQPSIQPQAQQFHQ--QPPPVPVQPT 300
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
282-598 |
1.87e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 51.69 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 282 PERPPSRSFEGSSHRTPSTELTWASKPTPVSEPVrhselvPWQYSEPARQYQLSSRSSEAAQLSLLPSVSDSSHASQPTR 361
Cdd:pfam03154 184 PSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQP------PNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMTQPPP 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 362 SNQSHAVSKPQPVSkpHPPFPMSQPPPTSNPfPLSQPPSNSKPFPMSQSSQNSK--PFPVSQSSQKSKPLLVSQSSQRSK 439
Cdd:pfam03154 258 PSQVSPQPLPQPSL--HGQMPPMPHSLQTGP-SHMQHPVPPQPFPLTPQSSQSQvpPGPSPAAPGQSQQRIHTPPSQSQL 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 440 PLPVSQSLQNSNPFPVSQPSSNSKPF----PVSQPQPASNPFPVSQPRPNSQPFSMSQP------SSTARPFPASQPPAA 509
Cdd:pfam03154 335 QSQQPPREQPLPPAPLSMPHIKPPPTtpipQLPNPQSHKHPPHLSGPSPFQMNSNLPPPpalkplSSLSTHHPPSAHPPP 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 510 SKSFPISQP--------------PTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPsqPPAASSSLSPL 575
Cdd:pfam03154 415 LQLMPQSQQlppppaqppvltqsQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGP--PTSTSSAMPGI 492
|
330 340
....*....|....*....|...
gi 30696783 576 PPVFNSTQSFQSPPVSTTPSAVP 598
Cdd:pfam03154 493 QPPSSASVSSSGPVPAAVSCPLP 515
|
|
| DnaJ |
COG0484 |
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ... |
81-147 |
2.71e-06 |
|
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440252 [Multi-domain] Cd Length: 139 Bit Score: 47.77 E-value: 2.71e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30696783 81 DWYAVLRLVRlTHNPELVATQYSRLAVLLNPSRNRY-PYSEQAFRLISDAWYVLSDPSRKTLYDRELH 147
Cdd:COG0484 1 DYYEILGVSR-DASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGH 67
|
|
| PRK14292 |
PRK14292 |
chaperone protein DnaJ; Provisional |
81-144 |
4.18e-06 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237662 [Multi-domain] Cd Length: 371 Bit Score: 49.89 E-value: 4.18e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30696783 81 DWYAVLRLVRlTHNPELVATQYSRLAVLLNPSRNRYPYSEQAFRLISDAWYVLSDPSRKTLYDR 144
Cdd:PRK14292 3 DYYELLGVSR-TASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDR 65
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
409-572 |
7.52e-06 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 49.34 E-value: 7.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 409 QSSQNSKPFPVSQSSqkskpLLVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKpfpvSQPQPASNPFPVSQPRPNSQP 488
Cdd:PHA03269 16 NLIIANLNTNIPIPE-----LHTSAATQKPDPAPAPHQAASRAPDPAVAPTSAAS----RKPDLAQAPTPAASEKFDPAP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 489 FSMSQpsSTARPFPASQPPAASKSFPISQPPTTSKPfvsqppnTSKPMPVSQPPTTSKplpvSQPPPTFQSTCPSQPPAA 568
Cdd:PHA03269 87 APHQA--ASRAPDPAVAPQLAAAPKPDAAEAFTSAA-------QAHEAPADAGTSAAS----KKPDPAAHTQHSPPPFAY 153
|
....
gi 30696783 569 SSSL 572
Cdd:PHA03269 154 TRSM 157
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
268-601 |
7.64e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.78 E-value: 7.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 268 NATERVQSSRRFAEPERPPSRSFEGSSHRTPSTELTWASKPTPVSEPVRHSELVPWQYSEPARqyqlSSRSSEAAQLSLL 347
Cdd:PHA03307 85 RSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPP----PAASPPAAGASPA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 348 PSVSDSSHASQPTRSNQSHAVSKPQPVSKPHPPFPMSQPPPTSNPFPLSQPPSNSK---PFPMSQSSQNSKPFPVSQSSQ 424
Cdd:PHA03307 161 AVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASassPAPAPGRSAADDAGASSSDSS 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 425 KSKPLLVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPAS 504
Cdd:PHA03307 241 SSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSS 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 505 QPPA-----ASKSFPISQPPTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPPPTfqstcPSQPPA------ASSSLS 573
Cdd:PHA03307 321 SRESsssstSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSS-----PAASAGrptrrrARAAVA 395
|
330 340
....*....|....*....|....*...
gi 30696783 574 PLPPVFNSTQSFQSPPVSTTPSAVPEAS 601
Cdd:PHA03307 396 GRARRRDATGRFPAGRPRPSPLDAGAAS 423
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
356-577 |
8.32e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.46 E-value: 8.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 356 ASQPTRSNQSHAVSKPQPVSKPHPPFPMSQPPPTSNPFPLSQPPSNSKPFPMSQSSQNSKPFPVSQSSQKSKPLLVSQSS 435
Cdd:PRK07003 384 GARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRC 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 436 QRSKPLPVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPI 515
Cdd:PRK07003 464 DERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPA 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 516 SQ-------------------------PPTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASS 570
Cdd:PRK07003 544 ARaggaaaaldvlrnagmrvssdrgarAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESR 623
|
250
....*....|.
gi 30696783 571 SLSP----LPP 577
Cdd:PRK07003 624 GAPPpwedIPP 634
|
|
| PRK14291 |
PRK14291 |
chaperone protein DnaJ; Provisional |
81-155 |
8.55e-06 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237661 [Multi-domain] Cd Length: 382 Bit Score: 49.00 E-value: 8.55e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30696783 81 DWYAVLRLVRlTHNPELVATQYSRLAVLLNPSRNRYPYSEQAFRLISDAWYVLSDPSRKTLYDrelhlsQFGQLG 155
Cdd:PRK14291 4 DYYEILGVSR-NATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYD------QFGHAA 71
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
390-598 |
9.00e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.10 E-value: 9.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 390 SNPFPLSQPPSNSKPFPmsqSSQNSKPFPVSQSSQKSKPLLVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKPFPVsq 469
Cdd:PRK12323 383 AQPAPAAAAPAAAAPAP---AAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAA-- 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 470 PQPASNPfPVSQPRPNsqpfsmsqPSSTARPFPASQPPAASKSFPISQPPTTSKP--FVSQPPNTSKPMPVSQPPTTSKP 547
Cdd:PRK12323 458 PAAAARP-AAAGPRPV--------AAAAAAAPARAAPAAAPAPADDDPPPWEELPpeFASPAPAQPDAAPAGWVAESIPD 528
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 30696783 548 LPVSQPPPTFqstcPSQPPAASSSLSPLPPVFNSTQSFQSPPVSTTPSAVP 598
Cdd:PRK12323 529 PATADPDDAF----ETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPD 575
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
392-629 |
1.18e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 48.92 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 392 PFPLSQPPSNskPFPMSQSSQNSKPFPVSQSSQK-SKPLLVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKP------ 464
Cdd:PTZ00449 514 PEASGLPPKA--PGDKEGEEGEHEDSKESDEPKEgGKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKPEFPKDPkhpkdp 591
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 465 -FPVSQPQPASNPFPVSQPRPNsQPFSMSQPSSTARPFPASQPpaaSKSFPISQPPTTSKPFVSQPPNTSKPMPVSQPP- 542
Cdd:PTZ00449 592 eEPKKPKRPRSAQRPTRPKSPK-LPELLDIPKSPKRPESPKSP---KRPPPPQRPSSPERPEGPKIIKSPKPPKSPKPPf 667
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 543 ---------------------TTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPPVFNSTQSFqsppvSTTPSAVPEAS 601
Cdd:PTZ00449 668 dpkfkekfyddyldaaakskeTKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEF-----PFEPIGDPDAE 742
|
250 260
....*....|....*....|....*...
gi 30696783 602 TIPSPPAPAPVAQPTHVFNQTPPPEQTP 629
Cdd:PTZ00449 743 QPDDIEFFTPPEEERTFFHETPADTPLP 770
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
395-650 |
1.54e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 48.93 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 395 LSQPPSNSKPFPMSQSSQNSKPFPVSQSSQKSkpllVSQSSQRSKPLPVSQSLQNSNPFPVSQPssnskpfpVSQPQPAS 474
Cdd:PRK10263 341 TQTPPVASVDVPPAQPTVAWQPVPGPQTGEPV----IAPAPEGYPQQSQYAQPAVQYNEPLQQP--------VQPQQPYY 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 475 NPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPP 554
Cdd:PRK10263 409 APAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQP 488
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 555 -----PTFQSTCPSQPP----------------AASSSLSPLP-------PVFNSTQSFQS---PPVSTTPSAVPEASTI 603
Cdd:PRK10263 489 vvepePVVEETKPARPPlyyfeeveekrarereQLAAWYQPIPepvkepePIKSSLKAPSVaavPPVEAAAAVSPLASGV 568
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 604 PSPPAPAPVAQPTH--VFN----QTPPPE-------QTPKSGAARTDSEPEVSSFWTTCP 650
Cdd:PRK10263 569 KKATLATGAAATVAapVFSlansGGPRPQvkegigpQLPRPKRIRVPTRRELASYGIKLP 628
|
|
| PRK14284 |
PRK14284 |
chaperone protein DnaJ; Provisional |
81-144 |
1.57e-05 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237658 [Multi-domain] Cd Length: 391 Bit Score: 47.92 E-value: 1.57e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30696783 81 DWYAVLRLVRlTHNPELVATQYSRLAVLLNPSRNryP---YSEQAFRLISDAWYVLSDPSRKTLYDR 144
Cdd:PRK14284 2 DYYTILGVSK-TASPEEIKKAYRKLAVKYHPDKN--PgdaEAEKRFKEVSEAYEVLSDAQKRESYDR 65
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
468-644 |
1.62e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 468 SQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPA----ASKSFPISQPPTTSKPFVSQPPNTSKPMPVS---Q 540
Cdd:PRK07764 595 AGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAApaeaSAAPAPGVAAPEHHPKHVAVPDASDGGDGWPakaG 674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 541 PPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPPVFNSTQSFQSPPVSTTPSAVPEASTIPSPPAPAPVAQPTHVFN 620
Cdd:PRK07764 675 GAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGA 754
|
170 180
....*....|....*....|....
gi 30696783 621 QTPPPEQTPKSGAARTDSEPEVSS 644
Cdd:PRK07764 755 PAQPPPPPAPAPAAAPAAAPPPSP 778
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
370-577 |
1.68e-05 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 48.52 E-value: 1.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 370 KPQPVSKPHPPFPMSQPPPTSNP--FPLSQPPSNSKPFPMSQSSQNSKPFPVSQSSQKSKPLLVSQSSQRSKPLPVSQSL 447
Cdd:PHA03378 599 VPHPSQTPEPPTTQSHIPETSAPrqWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSP 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 448 QNSNPFPVSQPSSNSKPFPVSQPQPASNPF--PVSQPRPNSQPFSMSQPSSTA----RPFPASQPPAASKSFPISQPPTT 521
Cdd:PHA03378 679 TGANTMLPIQWAPGTMQPPPRAPTPMRPPAapPGRAQRPAAATGRARPPAAAPgrarPPAAAPGRARPPAAAPGRARPPA 758
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 30696783 522 SKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPP 577
Cdd:PHA03378 759 AAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAA 814
|
|
| PRK14299 |
PRK14299 |
chaperone protein DnaJ; Provisional |
81-144 |
1.84e-05 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237667 [Multi-domain] Cd Length: 291 Bit Score: 47.24 E-value: 1.84e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30696783 81 DWYAVLRLVRLTHNPElVATQYSRLAVLLNPSRNRYPYSEQAFRLISDAWYVLSDPSRKTLYDR 144
Cdd:PRK14299 5 DYYAILGVPKNASQDE-IKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDT 67
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
452-582 |
2.02e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 2.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 452 PFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSfPISQPPTTSKPFVSQPPN 531
Cdd:PRK14951 381 PARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAA-PAAVALAPAPPAQAAPET 459
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 30696783 532 TSKPMPVSQPPttskPLPVSQPPPtfqstcPSQPPAASSSLSPLPPVFNST 582
Cdd:PRK14951 460 VAIPVRVAPEP----AVASAAPAP------AAAPAAARLTPTEEGDVWHAT 500
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
359-604 |
2.39e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 48.22 E-value: 2.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 359 PTRSNQSHAVSKPQPVSKPHPPFPMSQPPPTSNPfPLSQPPSNSKPFPMSQSSQNSKPFPVSQSSQKSKPLLVSQSSQRS 438
Cdd:pfam03154 301 TPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQL-QSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLS 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 439 KPLPVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQ--PRPNSQPFSMSQpSSTARPFPASQPPAASKSFPIS 516
Cdd:pfam03154 380 GPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQqlPPPPAQPPVLTQ-SQSLPPPAASHPPTSGLHQVPS 458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 517 QPPTTSKPFVSQPPNTSKPmPVSQPPTTSKPLPVSQPPPTfqstcpsqppAASSSLSPLPpvfnSTQSFQSPPVSTTPSA 596
Cdd:pfam03154 459 QSPFPQHPFVPGGPPPITP-PSGPPTSTSSAMPGIQPPSS----------ASVSSSGPVP----AAVSCPLPPVQIKEEA 523
|
....*...
gi 30696783 597 VPEASTIP 604
Cdd:pfam03154 524 LDEAEEPE 531
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
436-529 |
2.60e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 47.85 E-value: 2.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 436 QRSKPL---PVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFS-MSQPSSTARPFPASQPPAASK 511
Cdd:PRK14971 377 QHIKPVftqPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAvPVNPPSTAPQAVRPAQFKEEK 456
|
90
....*....|....*...
gi 30696783 512 SFPISQPPTTSkPFVSQP 529
Cdd:PRK14971 457 KIPVSKVSSLG-PSTLRP 473
|
|
| PRK10266 |
PRK10266 |
curved DNA-binding protein; |
78-164 |
2.71e-05 |
|
curved DNA-binding protein;
Pssm-ID: 182347 [Multi-domain] Cd Length: 306 Bit Score: 46.74 E-value: 2.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 78 DLPDWYAVLRlVRLTHNPELVATQYSRLAVLLNPSRNRYPYSEQAFRLISDAWYVLSDPSRKTLYDR-ELHLS--QFG-Q 153
Cdd:PRK10266 2 ELKDYYAIMG-VKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQlWQHRNdpQFNrQ 80
|
90
....*....|.
gi 30696783 154 LGQLGFQLFNQ 164
Cdd:PRK10266 81 FQHGDGQSFNA 91
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
466-553 |
2.74e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 47.46 E-value: 2.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 466 PVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTS--KPMPVSQppT 543
Cdd:PRK14971 386 PAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAVRPAQFKeeKKIPVSK--V 463
|
90
....*....|
gi 30696783 544 TSKPLPVSQP 553
Cdd:PRK14971 464 SSLGPSTLRP 473
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
454-577 |
2.84e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.79 E-value: 2.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 454 PVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTS 533
Cdd:PRK14951 371 EAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPA 450
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 30696783 534 KPmPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPP 577
Cdd:PRK14951 451 PP-AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
454-643 |
3.22e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.56 E-value: 3.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 454 PVSQPSSNSKPFPVSQPQPASNPFPVSQPrPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPnts 533
Cdd:PRK12323 381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAA-PAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAA--- 456
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 534 KPMPVSQPPTTS-KPLPVSQPPPTFQSTCPSQPPAASSSLSP---LPPVFNSTQSFQSPPV-------STTPSAVPEAST 602
Cdd:PRK12323 457 APAAAARPAAAGpRPVAAAAAAAPARAAPAAAPAPADDDPPPweeLPPEFASPAPAQPDAApagwvaeSIPDPATADPDD 536
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 30696783 603 IPSPPAPAPVAQPTHVFNQTPPPEQTPKSGAARTDSEPEVS 643
Cdd:PRK12323 537 AFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMF 577
|
|
| DnaJ |
cd06257 |
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ... |
81-135 |
3.58e-05 |
|
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Pssm-ID: 99751 [Multi-domain] Cd Length: 55 Bit Score: 41.76 E-value: 3.58e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 30696783 81 DWYAVLRlVRLTHNPELVATQYSRLAVLLNPSRNRY-PYSEQAFRLISDAWYVLSD 135
Cdd:cd06257 1 DYYDILG-VPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
275-632 |
3.75e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.45 E-value: 3.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 275 SSRRFAEPERPPSRSFEGSSHRTPSTELTWASKPTPVSEPVRHSELVPWQYSEPARQYQLSSRSSEAAQLSLLPSVSDSS 354
Cdd:pfam03154 144 TSPSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQS 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 355 HASqPTRSNQSHAVSKPQPVSKPHPPFPmsqppptsnPFPLSQPPSNSKPFPMSQSSQNSKPFPVSQSSQKSKPLLVSQS 434
Cdd:pfam03154 224 TAA-PHTLIQQTPTLHPQRLPSPHPPLQ---------PMTQPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPV 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 435 SQRSKPLPVSQSLQNSNPFP---VSQPSSNSKPFPVSQPQPASNPFPVSQP---RPNSQPFSMSQPSSTARPFPASQ--- 505
Cdd:pfam03154 294 PPQPFPLTPQSSQSQVPPGPspaAPGQSQQRIHTPPSQSQLQSQQPPREQPlppAPLSMPHIKPPPTTPIPQLPNPQshk 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 506 -PPAASKSFPISQ-----PPTTSKPFVSQPpnTSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPPVF 579
Cdd:pfam03154 374 hPPHLSGPSPFQMnsnlpPPPALKPLSSLS--THHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTS 451
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 30696783 580 NSTQSFQSPPVSTTPSAVPEASTIPSPPAPAPVAQPTHVFNQTPPPEQTPKSG 632
Cdd:pfam03154 452 GLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPPSSASVSSSG 504
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
308-631 |
4.15e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.45 E-value: 4.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 308 PTPVSEPVRHSELVPWQYSEPARQyqlSSRSSEAAQLSLLPSVSDSSHASQPTRSNQSHAVSKPQPVSKPHPPFPMSQPP 387
Cdd:pfam03154 74 PSPLKSAKRQREKGASDTEEPERA---TAKKSKTQEISRPNSPSEGEGESSDGRSVNDEGSSDPKDIDQDNRSTSPSIPS 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 388 PTSNPfplsqppSNSKPFPMSQSSQNSKPFPVSQSSQKSKPLL-VSQSSQRSKPLPVSqslqnSNPFPVSQPSSNSKPFP 466
Cdd:pfam03154 151 PQDNE-------SDSDSSAQQQILQTQPPVLQAQSGAASPPSPpPPGTTQAATAGPTP-----SAPSVPPQGSPATSQPP 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 467 VsQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQP------PTTSKPFVSQPPNTSKPMPVSQ 540
Cdd:pfam03154 219 N-QTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSPQPLPQPslhgqmPPMPHSLQTGPSHMQHPVPPQP 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 541 PPTTSK------PLPVSQPPPTFQSTCPSQPPAASSSLS-------PLPPVFNSTQSFQSPPVSTTPSaVPEASTIPSPP 607
Cdd:pfam03154 298 FPLTPQssqsqvPPGPSPAAPGQSQQRIHTPPSQSQLQSqqppreqPLPPAPLSMPHIKPPPTTPIPQ-LPNPQSHKHPP 376
|
330 340
....*....|....*....|....
gi 30696783 608 APAPVAQPTHVFNQTPPPEQTPKS 631
Cdd:pfam03154 377 HLSGPSPFQMNSNLPPPPALKPLS 400
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
466-558 |
5.13e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 46.69 E-value: 5.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 466 PVSQPQPASNPF---PVSQPRPNSQPFSMSQPSSTARPFPASQPPAASksfpisQPPTTSKPFVSQPPNTSKPMPVSQPP 542
Cdd:PRK14971 371 GGRGPKQHIKPVftqPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSAT------QPAGTPPTVSVDPPAAVPVNPPSTAP 444
|
90
....*....|....*...
gi 30696783 543 --TTSKPLPVSQPPPTFQ 558
Cdd:PRK14971 445 qaVRPAQFKEEKKIPVSK 462
|
|
| Caprin-1_C |
pfam12287 |
Cytoplasmic activation/proliferation-associated protein-1 C term; This family of proteins is ... |
484-600 |
8.21e-05 |
|
Cytoplasmic activation/proliferation-associated protein-1 C term; This family of proteins is found in eukaryotes. Proteins in this family are typically between 343 and 708 amino acids in length. This family is the C terminal region of caprin-1. Caprin-1 is a protein involved in regulating cellular proliferation. In mutated phenotypes, the G1 phase of the cell cycle is greatly lengthened, impairing normal proliferation. The C terminal region of caprin-1 contains RGG motifs which are characteriztic of RNA binding domains. It is possible that caprin-1 functions through an RNA binding mechanism.
Pssm-ID: 463522 [Multi-domain] Cd Length: 320 Bit Score: 45.55 E-value: 8.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 484 PNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPT-TSKPFVSQPPNT-SKPMPVSQPPTTSKPLPVSQPPPTFQSTC 561
Cdd:pfam12287 31 VSAQPPSQSPDLSQMVCPPASPEQRLSQQSDVLQQPEqTQVSPVSPSSNAcASSGSEYQFHTSEPPQPEAIDPIQSSMSL 110
|
90 100 110
....*....|....*....|....*....|....*....
gi 30696783 562 PSQPPAASSSLSPLPPvfnsTQSFQSPPVSTTPSAVPEA 600
Cdd:pfam12287 111 PSELAPPSPPLSPASQ----PQVFQSKPASSSGINVNAA 145
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
423-601 |
1.44e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.61 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 423 SQKSKPLLVSQSSQRSKPLPVSQSLQNSNPFPVSqPSSNSKPFPVSQPQPASNPFPVSQPRPnsqpfsmsQPSSTARPFP 502
Cdd:PRK07003 372 VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGA-AGAALAPKAAAAAAATRAEAPPAAPAP--------PATADRGDDA 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 503 ASQPPAASKSFPISQPPTTSKPFVSQPPNTSkPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPPVFNST 582
Cdd:PRK07003 443 ADGDAPVPAKANARASADSRCDERDAQPPAD-SGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDA 521
|
170
....*....|....*....
gi 30696783 583 QSFQSPPVSTTPSAVPEAS 601
Cdd:PRK07003 522 PAAAAPPAPEARPPTPAAA 540
|
|
| PRK14283 |
PRK14283 |
chaperone protein DnaJ; Provisional |
81-159 |
1.45e-04 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184604 [Multi-domain] Cd Length: 378 Bit Score: 44.82 E-value: 1.45e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30696783 81 DWYAVLRLVRlTHNPELVATQYSRLAVLLNPSRNRYPYSEQAFRLISDAWYVLSDPSRKTLYDrelhlsQFGQLGQLGF 159
Cdd:PRK14283 6 DYYEVLGVDR-NADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYD------QFGHAGMDGF 77
|
|
| Rrn6 |
pfam10214 |
RNA polymerase I-specific transcription-initiation factor; RNA polymerase I-specific ... |
334-498 |
1.66e-04 |
|
RNA polymerase I-specific transcription-initiation factor; RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I. These proteins are found in fungi.
Pssm-ID: 431141 Cd Length: 846 Bit Score: 45.21 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 334 LSSRSSEAAQLSLLPSVSDSSHASQPTRSNQSHAVSKPQPVSKPHPPFPMSQPPPTSNPFP----LSQPPSNSKP--FPM 407
Cdd:pfam10214 660 VSKQRPEASSLSSSLSSSQSSSSSSSGSSSADPSISRSDPTDALSRYTTLIKSLPLSLSRRvaniLSHWDLGSDPedYDW 739
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 408 SQSSQNSKPFPVSQSSQKSKpllVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPrPNSQ 487
Cdd:pfam10214 740 QRTVSSLEEEEDSRQRSRRR---RERRRRRKERLRSRSRARASQSSSSSQSSPSSSNLPSSSPQPILPDFSLMQI-SSSQ 815
|
170
....*....|....*
gi 30696783 488 PFS----MSQPSSTA 498
Cdd:pfam10214 816 LTSssqpMSQPERGR 830
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
459-577 |
1.85e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.80 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 459 SSNSKPFPVSQPQPASNPFPVSQPRPNSQPfsmSQPSSTARPFPASQPPAASKSFPISQPPTTSkpfvSQPPNTSKPMPV 538
Cdd:PRK14950 345 SYGQLPLELAVIEALLVPVPAPQPAKPTAA---APSPVRPTPAPSTRPKAAAAANIPPKEPVRE----TATPPPVPPRPV 417
|
90 100 110
....*....|....*....|....*....|....*....
gi 30696783 539 SQPPTTSKPlpvsQPPPTFQSTCPSqpPAASSSLSPLPP 577
Cdd:PRK14950 418 APPVPHTPE----SAPKLTRAAIPV--DEKPKYTPPAPP 450
|
|
| PABP-1234 |
TIGR01628 |
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
413-577 |
2.13e-04 |
|
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range.
Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 44.80 E-value: 2.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 413 NSKPFPV--SQSSQKSKPLLVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASNPFpvSQPRPNSQpfs 490
Cdd:TIGR01628 352 GGKPLYValAQRKEQRRAHLQDQFMQLQPRMRQLPMGSPMGGAMGQPPYYGQGPQQQFNGQPLGWPR--MSMMPTPM--- 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 491 msQPSSTARP-FPAsqPPAASKSFPISQPPTTSKPfvsqPPNTSKPMPVSQPPTTSKPLPvsQPPPTFQSTCPSqpPAAS 569
Cdd:TIGR01628 427 --GPGGPLRPnGLA--PMNAVRAPSRNAQNAAQKP----PMQPVMYPPNYQSLPLSQDLP--QPQSTASQGGQN--KKLA 494
|
....*...
gi 30696783 570 SSLSPLPP 577
Cdd:TIGR01628 495 QVLASATP 502
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
482-589 |
2.27e-04 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 44.35 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 482 PRPNSQPFSMSQPSSTARPFPASQPPAAS-KSFPISQPPTTSKPFVSQPPNTSKPMP-VSQPPTTSKPLPVsqppptfQS 559
Cdd:PRK13335 74 PKLEKAPNTNEEKTSASKIEKISQPKQEEqKSLNISATPAPKQEQSQTTTESTTPKTkVTTPPSTNTPQPM-------QS 146
|
90 100 110
....*....|....*....|....*....|..
gi 30696783 560 TCPSQP--PAASSSLSPLPPVFNSTQSFQSPP 589
Cdd:PRK13335 147 TKSDTPqsPTIKQAQTDMTPKYEDLRAYYTKP 178
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
480-594 |
2.59e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.47 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 480 SQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPPPTFQS 559
Cdd:PRK07994 364 PLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEP 443
|
90 100 110
....*....|....*....|....*....|....*
gi 30696783 560 TCPSQPPAASSSLSPLPPVFNSTQSFQSPPVSTTP 594
Cdd:PRK07994 444 AAASRARPVNSALERLASVRPAPSALEKAPAKKEA 478
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
494-600 |
2.61e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.42 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 494 PSSTARPFPASQPPAASKSFPISQPPttskPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPPPTfqstcpsQPPAASSSLS 573
Cdd:PRK14950 365 APQPAKPTAAAPSPVRPTPAPSTRPK----AAAAANIPPKEPVRETATPPPVPPRPVAPPVPH-------TPESAPKLTR 433
|
90 100
....*....|....*....|....*..
gi 30696783 574 PLPPVfnstqsfQSPPVSTTPSAVPEA 600
Cdd:PRK14950 434 AAIPV-------DEKPKYTPPAPPKEE 453
|
|
| PHA01929 |
PHA01929 |
putative scaffolding protein |
449-509 |
2.65e-04 |
|
putative scaffolding protein
Pssm-ID: 177328 Cd Length: 306 Bit Score: 43.89 E-value: 2.65e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30696783 449 NSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAA 509
Cdd:PHA01929 26 TPQPNPVIQPQAPVQPGQPGAPQQLAIPTQQPQPVPTSAMTPHVVQQAPAQPAPAAPPAAG 86
|
|
| PRK14297 |
PRK14297 |
molecular chaperone DnaJ; |
81-152 |
2.88e-04 |
|
molecular chaperone DnaJ;
Pssm-ID: 184611 [Multi-domain] Cd Length: 380 Bit Score: 44.00 E-value: 2.88e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30696783 81 DWYAVLRLVRLTHNPElVATQYSRLAVLLNPSRNR-YPYSEQAFRLISDAWYVLSDPSRKTLYDrelhlsQFG 152
Cdd:PRK14297 5 DYYEVLGLEKGASDDE-IKKAFRKLAIKYHPDKNKgNKEAEEKFKEINEAYQVLSDPQKKAQYD------QFG 70
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
430-541 |
3.29e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.00 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 430 LVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSST--ARPFPASQPP 507
Cdd:PRK14971 362 LTQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVdpPAAVPVNPPS 441
|
90 100 110
....*....|....*....|....*....|....
gi 30696783 508 AASKSFPISQPPTTSKPFVSQPPntSKPMPVSQP 541
Cdd:PRK14971 442 TAPQAVRPAQFKEEKKIPVSKVS--SLGPSTLRP 473
|
|
| PRK14287 |
PRK14287 |
chaperone protein DnaJ; Provisional |
81-163 |
3.54e-04 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237659 [Multi-domain] Cd Length: 371 Bit Score: 43.84 E-value: 3.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 81 DWYAVLRLVRlTHNPELVATQYSRLAVLLNPSRNRYPYSEQAFRLISDAWYVLSDPSRKTLYDRELHLSQ---FGQLGQL 157
Cdd:PRK14287 5 DYYEVLGVDR-NASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPnqgFGGGGAG 83
|
....*.
gi 30696783 158 GFQLFN 163
Cdd:PRK14287 84 DFGGFS 89
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
454-594 |
4.39e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 43.75 E-value: 4.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 454 PVSQPSSNSKPFPVSQPQPASNPFPVSQPRPN---SQPFSMSQPSS---TARPFPASQPPAASKSFPISQPPTTSK---- 523
Cdd:pfam05109 466 PTVSTADVTSPTPAGTTSGASPVTPSPSPRDNgteSKAPDMTSPTSavtTPTPNATSPTPAVTTPTPNATSPTLGKtspt 545
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30696783 524 -PFVSQPPNTSKPMPVSQPPTTSKPLP-VSQPPPTFQSTCPSqPPAASSSLSPLPPVFNSTQ----SFQSPPVSTTP 594
Cdd:pfam05109 546 sAVTTPTPNATSPTPAVTTPTPNATIPtLGKTSPTSAVTTPT-PNATSPTVGETSPQANTTNhtlgGTSSTPVVTSP 621
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
376-510 |
4.68e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 4.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 376 KPHPPFPMSQPPPTSNPFPLSQPPSNSKPFPMSQSSQNSKPFPVSQSSQKSKPLLVSQSSQRSKPLPVSQ-SLQNSNPFP 454
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPaAAPAAAPAA 444
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 30696783 455 VSQPSSnskPFPVSQPQPASNPFPVsQPRPnsqpfsmsqPSSTARPFPASQPPAAS 510
Cdd:PRK14951 445 VALAPA---PPAQAAPETVAIPVRV-APEP---------AVASAAPAPAAAPAAAR 487
|
|
| PRK14282 |
PRK14282 |
chaperone protein DnaJ; Provisional |
81-156 |
4.88e-04 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184603 [Multi-domain] Cd Length: 369 Bit Score: 43.24 E-value: 4.88e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30696783 81 DWYAVLRLVRLTHNPELVATqYSRLAVLLNPSRN--RYPYSEQAFRLISDAWYVLSDPSRKTLYDRelhlsqFGQLGQ 156
Cdd:PRK14282 5 DYYEILGVSRNATQEEIKRA-YKRLVKEWHPDRHpeNRKEAEQKFKEIQEAYEVLSDPQKRAMYDR------FGYVGE 75
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
394-598 |
5.36e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 43.38 E-value: 5.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 394 PLSQPPSNSKPFPMSQSSQNSKPFPVSQSSQKSKPLLVSQSSQR-SKPLPVSQSLQNSNPFPVSQPSSNSKPFPVSQPQP 472
Cdd:PLN03209 339 PKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPpTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSPGS 418
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 473 ASNpfpVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPIS--QPPTTSKPFVSQPPNTSKPMPVSQppTTSKPLPV 550
Cdd:PLN03209 419 ASN---VPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTgvSPSVSSTSSVPAVPDTAPATAATD--AAAPPPAN 493
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 30696783 551 SQPPPTFQSTCPSQPPAASSSLSPLPPVFNSTQSFQSPPVSTTPSAVP 598
Cdd:PLN03209 494 MRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTAL 541
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
486-598 |
5.55e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 43.61 E-value: 5.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 486 SQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPfvSQPPntsKPMPVSQPPTTSKPLPVSQPPPTfqstcPSQP 565
Cdd:PRK14971 370 SGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAA--AQPS---APQSATQPAGTPPTVSVDPPAAV-----PVNP 439
|
90 100 110
....*....|....*....|....*....|...
gi 30696783 566 PAASSSLSPlPPVFNSTqsfQSPPVSTTPSAVP 598
Cdd:PRK14971 440 PSTAPQAVR-PAQFKEE---KKIPVSKVSSLGP 468
|
|
| GGN |
pfam15685 |
Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the ... |
454-603 |
6.24e-04 |
|
Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the maturation of sperm and is expressed virtually only in the testis. It is found to be associated with the intracellular membrane, binds with GGNBP1 and may be involved in vesicular trafficking.
Pssm-ID: 434857 [Multi-domain] Cd Length: 668 Bit Score: 43.22 E-value: 6.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 454 PVSQPSSNSKPFPvSQPQPASNPFPVSQPRPNS----QPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSkpfvSQP 529
Cdd:pfam15685 379 PRRRAAALSGPWG-SPPPPPGKAHPIPGPRRPApallAPPMFIFPAPTNGEPVRPGPPAPQALLPRPPPPTPP----ATP 453
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30696783 530 PNTSKPMPVSqPPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPPVFNSTQSfQSPPVSTTPSAVPEASTI 603
Cdd:pfam15685 454 PPVPPPIPQL-PALQPMPLAAARPPTPRPCPGHGESALAPAPTAPLPPALAADQA-PAPALAAAPAPSPAPAPA 525
|
|
| PRK12727 |
PRK12727 |
flagellar biosynthesis protein FlhF; |
443-603 |
6.28e-04 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 43.05 E-value: 6.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 443 VSQSLQNSNPfpvSQPSSNSKPFPVSQPqPASNPFPVSQPRPNSQPFSMSQPSSTARPFPA-------SQPPAASKSFPI 515
Cdd:PRK12727 51 VQRALETARS---DTPATAAAPAPAPQA-PTKPAAPVHAPLKLSANANMSQRQRVASAAEDmiaamalRQPVSVPRQAPA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 516 SQPPTTskpfvsqppnTSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLP-PVFNSTQSFQSPPVSTTP 594
Cdd:PRK12727 127 AAPVRA----------ASIPSPAAQALAHAAAVRTAPRQEHALSAVPEQLFADFLTTAPVPrAPVQAPVVAAPAPVPAIA 196
|
....*....
gi 30696783 595 SAVPEASTI 603
Cdd:PRK12727 197 AALAAHAAY 205
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
418-550 |
6.48e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 6.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 418 PVSQSSQKSKPLLVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPrpnsqpfSMSQPSST 497
Cdd:PRK14951 371 EAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPA-------AAPAAAPA 443
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 30696783 498 ARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPV 550
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
389-570 |
7.19e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 7.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 389 TSNPFPLSQPPSNSKPFPMSQSSQNSKPFPVSQSSQKSKPLLVSQSSQRSKPLPVSQSLQNSNPFPVSQPSSNSKPFPVS 468
Cdd:PRK07764 600 PPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPA 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 469 QPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPntsKPMPVSQPPTTSKPL 548
Cdd:PRK07764 680 APPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPL---PPEPDDPPDPAGAPA 756
|
170 180
....*....|....*....|..
gi 30696783 549 PVSQPPPTFQSTCPSQPPAASS 570
Cdd:PRK07764 757 QPPPPPAPAPAAAPAAAPPPSP 778
|
|
| PRK14294 |
PRK14294 |
chaperone protein DnaJ; Provisional |
81-159 |
7.51e-04 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237664 [Multi-domain] Cd Length: 366 Bit Score: 42.44 E-value: 7.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 81 DWYAVLRLVRLTHNPELVAtQYSRLAVLLNPSRNryP---YSEQAFRLISDAWYVLSDPSRKTLYDRELH--LSQFGQLG 155
Cdd:PRK14294 5 DYYEILGVTRDASEEEIKK-SYRKLAMKYHPDRN--PgdkEAEELFKEAAEAYEVLSDPKKRGIYDQYGHegLSGTGFSG 81
|
....
gi 30696783 156 QLGF 159
Cdd:PRK14294 82 FSGF 85
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
454-570 |
7.70e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 7.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 454 PVSQPSSNSKPFPVSQPQPAsnPFPvSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPN-- 531
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAA--PAA-APAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAap 462
|
90 100 110
....*....|....*....|....*....|....*....
gi 30696783 532 TSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASS 570
Cdd:PRK07764 463 SAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPA 501
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
439-556 |
8.41e-04 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 42.78 E-value: 8.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 439 KPLPVSQSLQNSNPFPVS--QPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPIS 516
Cdd:PRK12799 297 GTVPVAAVTPSSAVTQSSaiTPSSAAIPSPAVIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVNMQP 376
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 30696783 517 QPPTTSKpfvSQPPNTSKPMPVSQPPTTSKPL-PVSQPPPT 556
Cdd:PRK12799 377 QPMSTTE---TQQSSTGNITSTANGPTTSLPAaPASNIPVS 414
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
466-603 |
9.06e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 9.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 466 PVSQPQPASNPFPVSQPRPNSQPFsmsQPSSTARPFPASQPPAAsksfPISQPPTTSKPFVSQPPNTSKPMPVSQPPTTS 545
Cdd:PRK07764 392 GAPAAAAPSAAAAAPAAAPAPAAA---APAAAAAPAPAAAPQPA----PAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSA 464
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 30696783 546 KPLPVSQPPPTfqstcPSQPPAASSSLSPLPPvfnstQSFQSPPVSTTPSAVPEASTI 603
Cdd:PRK07764 465 QPAPAPAAAPE-----PTAAPAPAPPAAPAPA-----AAPAAPAAPAAPAGADDAATL 512
|
|
| PRK14288 |
PRK14288 |
molecular chaperone DnaJ; |
82-144 |
9.34e-04 |
|
molecular chaperone DnaJ;
Pssm-ID: 172776 [Multi-domain] Cd Length: 369 Bit Score: 42.37 E-value: 9.34e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30696783 82 WYAVLRLVRLThNPELVATQYSRLAVLLNPSRNRY-PYSEQAFRLISDAWYVLSDPSRKTLYDR 144
Cdd:PRK14288 5 YYEILEVEKHS-NQETIKKSYRKLALKYHPDRNAGdKEAEEKFKLINEAYGVLSDEKKRALYDR 67
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
464-574 |
9.87e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 41.53 E-value: 9.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 464 PFPVSQPQPASNPfPVSQPRPnSQPfsmsqPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTSKPMPVSQPPT 543
Cdd:PRK11633 45 PKPGDRDEPDMMP-AATQALP-TQP-----PEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKP 117
|
90 100 110
....*....|....*....|....*....|.
gi 30696783 544 TSKPLPVSQPPPTFQstcPSQPPAASSSLSP 574
Cdd:PRK11633 118 KPKPQQKVEAPPAPK---PEPKPVVEEKAAP 145
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
488-588 |
1.04e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 488 PFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQ--------PPPTFQS 559
Cdd:PHA03247 375 PKRASLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEpgsddgpaPPPERQP 454
|
90 100
....*....|....*....|....*....
gi 30696783 560 TCPSQPPAASSSLSPLPPVFNSTQSFQSP 588
Cdd:PHA03247 455 PAPATEPAPDDPDDATRKALDALRERRPP 483
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
448-546 |
1.04e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 42.04 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 448 QNSNPFPVSQPSSNSKPFPVSQPQPASNPfpvsqPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVS 527
Cdd:PRK13335 70 QERTPKLEKAPNTNEEKTSASKIEKISQP-----KQEEQKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPM 144
|
90
....*....|....*....
gi 30696783 528 QPPNTSKPmpvsQPPTTSK 546
Cdd:PRK13335 145 QSTKSDTP----QSPTIKQ 159
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
452-537 |
1.08e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 42.62 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 452 PFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTarPFPASQPPAAsksfpiSQPPTTSKPFVSQPPN 531
Cdd:PRK14954 382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSPASA--PTPEQQPPVA------RSAPLPPSPQASAPRN 453
|
....*.
gi 30696783 532 TSKPMP 537
Cdd:PRK14954 454 VASGKP 459
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
514-643 |
1.16e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 42.46 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 514 PISQPPTTSKPFVSQPpntskpmpVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASS-SLSPLPPVFNSTQSFQSPPVST 592
Cdd:PRK14971 371 GGRGPKQHIKPVFTQP--------AAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQpAGTPPTVSVDPPAAVPVNPPST 442
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 30696783 593 TPSAVPEASTIPSPPAPAPVAQPTHVFNQTPPPEQTpksgAARTDSEPEVS 643
Cdd:PRK14971 443 APQAVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKA----EQATGNIKEAP 489
|
|
| PRK14301 |
PRK14301 |
chaperone protein DnaJ; Provisional |
81-160 |
1.17e-03 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237668 [Multi-domain] Cd Length: 373 Bit Score: 42.04 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 81 DWYAVLRLVRLTHNPElVATQYSRLAVLLNPSRN-RYPYSEQAFRLISDAWYVLSDPSRKTLYDRELHLSQFGQLGQLGF 159
Cdd:PRK14301 5 DYYEVLGVSRDASEDE-IKKAYRKLALQYHPDRNpDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGGF 83
|
.
gi 30696783 160 Q 160
Cdd:PRK14301 84 S 84
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
451-595 |
1.23e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 41.96 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 451 NPFPVSQPSSNSKPFPVSQPqpasnPFPvSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSfpiSQPPTTSKPFVSQPP 530
Cdd:pfam05539 168 PKTAVTTSKTTSWPTEVSHP-----TYP-SQVTPQSQPATQGHQTATANQRLSSTEPVGTQG---TTTSSNPEPQTEPPP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 531 NTSKPMPVSQ-PPTTSK------------------PLPVSQPPPTFQSTCPSQPPAASSSLSPLPPVFNSTQSFQSPPVS 591
Cdd:pfam05539 239 SQRGPSGSPQhPPSTTSqdqsttgdgqehtqrrktPPATSNRRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSPPHS 318
|
....
gi 30696783 592 TTPS 595
Cdd:pfam05539 319 SPPG 322
|
|
| PRK14277 |
PRK14277 |
chaperone protein DnaJ; Provisional |
81-160 |
1.39e-03 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184599 [Multi-domain] Cd Length: 386 Bit Score: 41.71 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 81 DWYAVLRLVRLTHNPELvATQYSRLAVLLNPSRNryP---YSEQAFRLISDAWYVLSDPSRKTLYDrelhlsQFGQLG-- 155
Cdd:PRK14277 6 DYYEILGVDRNATEEEI-KKAYRRLAKKYHPDLN--PgdkEAEQKFKEINEAYEILSDPQKRAQYD------QFGHAAfd 76
|
....*
gi 30696783 156 QLGFQ 160
Cdd:PRK14277 77 PGGFG 81
|
|
| PRK14293 |
PRK14293 |
molecular chaperone DnaJ; |
81-155 |
1.53e-03 |
|
molecular chaperone DnaJ;
Pssm-ID: 237663 [Multi-domain] Cd Length: 374 Bit Score: 41.51 E-value: 1.53e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30696783 81 DWYAVLRLVRlTHNPELVATQYSRLAVLLNPSRNRYPYSEQAFRLISDAWYVLSDPSRKTLYDrelhlsQFGQLG 155
Cdd:PRK14293 4 DYYEILGVSR-DADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYD------QFGEAG 71
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
432-643 |
1.58e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 432 SQSSQRSKPLPVSQSLQNSNPF-PVSQPSSNSKPFPvSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAAS 510
Cdd:PRK07764 592 PGAAGGEGPPAPASSGPPEEAArPAAPAAPAAPAAP-APAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWP 670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 511 KSFPISQP--PTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPPPtfqstcPSQPPAASSSLSPLPPVfnstqSFQSP 588
Cdd:PRK07764 671 AKAGGAAPaaPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDP------AAQPPQAAQGASAPSPA-----ADDPV 739
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 30696783 589 PVSTTPSAVPEASTIPSPPAPAPVAQPTHVFNQTPPPEQTPKSGAARTDSEPEVS 643
Cdd:PRK07764 740 PLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMD 794
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
492-603 |
1.62e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 492 SQPSSTARPFPASQPPAASKSFPISQPPTTSKPfvsQPPNTSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASSS 571
Cdd:PRK07764 391 AGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAP---APAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPA 467
|
90 100 110
....*....|....*....|....*....|..
gi 30696783 572 LSPLPPVFNSTQSFQSPPVSTTPSAVPEASTI 603
Cdd:PRK07764 468 PAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAA 499
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
445-569 |
1.71e-03 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 41.00 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 445 QSLQNSNPFPVSQPSSNSkPFPVSQPQPASNPfpvsqPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKP 524
Cdd:PHA02682 63 QSRLKANSACMQRPSGQS-PLAPSPACAAPAP-----ACPACAPAAPAPAVTCPAPAPACPPATAPTCPPPAVCPAPARP 136
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 30696783 525 FVSQPPNTsKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAAS 569
Cdd:PHA02682 137 APACPPST-RQCPPAPPLPTPKPAPAAKPIFLHNQLPPPDYPAAS 180
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
442-600 |
2.18e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.39 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 442 PVSQSLQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPfsmSQPSSTARPFPASQPPAASKSFPISQPPTT 521
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAP---QQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 522 SKPfvsqppntskpmpvSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPPVFNSTQSFQSPPVS-TTPSAVPEA 600
Cdd:PRK07994 438 AKK--------------SEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPvATPKALKKA 503
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
452-640 |
2.22e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 452 PFPVSQPSSNSKPFPVSQPQPASNPFPvSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQP------------- 518
Cdd:PHA03247 2463 PFSLSLLLGELFPGAPVYRRPAEARFP-FAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPvhprmltwirgle 2541
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 519 ---------PTTSKPFVSQPPNTSKPMPVSQPpttsKPLPvSQPPPTFQSTCPSQPPaasSSLSPLPPVFNSTQSFQSPP 589
Cdd:PHA03247 2542 elasddagdPPPPLPPAAPPAAPDRSVPPPRP----APRP-SEPAVTSRARRPDAPP---QSARPRAPVDDRGDPRGPAP 2613
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 30696783 590 VSTTPSAVPEASTIPSPPAPAPVAQPTHVFNQTPPPEQTPKSGAARTDSEP 640
Cdd:PHA03247 2614 PSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRP 2664
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
466-594 |
2.31e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 41.61 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 466 PVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAAsksfPISQPPTTSKPFVSQPPNTSKPMPVSQPPTTS 545
Cdd:PRK10263 743 PLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVA----PQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQ 818
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 30696783 546 KPLPVSQPPPTFQStcPSQPPAASSSLSPLPPVF---NSTQSFQSPpvsTTP 594
Cdd:PRK10263 819 QPQQPVAPQPQYQQ--PQQPVAPQPQDTLLHPLLmrnGDSRPLHKP---TTP 865
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
441-549 |
2.71e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.33 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 441 LPVSQSLQNSNPFPVSQPSSNSKPFPVS-QPQPASNPFPvsqPRPNSQPfsmsqpssTARPFPASQPPAASKSFPISQPP 519
Cdd:PRK14950 353 LAVIEALLVPVPAPQPAKPTAAAPSPVRpTPAPSTRPKA---AAAANIP--------PKEPVRETATPPPVPPRPVAPPV 421
|
90 100 110
....*....|....*....|....*....|
gi 30696783 520 TTSKPfvSQPPNTSKPMPVSQPPTTSKPLP 549
Cdd:PRK14950 422 PHTPE--SAPKLTRAAIPVDEKPKYTPPAP 449
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
529-646 |
3.14e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 3.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 529 PPNTSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQPPAASSSLSPLPPVfnstqSFQSPPVSTTPSAVPEASTIpsppa 608
Cdd:PRK14950 365 APQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPP-----RPVAPPVPHTPESAPKLTRA----- 434
|
90 100 110
....*....|....*....|....*....|....*...
gi 30696783 609 pAPVAQPTHVFNQTPPPEQTPKSGAARTDSEPEVSSFW 646
Cdd:PRK14950 435 -AIPVDEKPKYTPPAPPKEEEKALIADGDVLEQLEAIW 471
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
456-576 |
3.42e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.12 E-value: 3.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 456 SQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPttskpfvsQPPNTSKP 535
Cdd:PRK07764 397 AAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAA--------APSAQPAP 468
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 30696783 536 MPVSQPPTTSKPLPVSQPPPTfQSTCPSQPPAASSSLSPLP 576
Cdd:PRK07764 469 APAAAPEPTAAPAPAPPAAPA-PAAAPAAPAAPAAPAGADD 508
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
336-644 |
3.75e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 41.06 E-value: 3.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 336 SRSSEAAQLSllPSVSDSSHASQPTRSNQSHAVSKPQPVSKPHPPFPMSQPPPTSNPFPLSQPPSNSKPFPmsqssqnsK 415
Cdd:pfam05109 422 SKAPESTTTS--PTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTP--------S 491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 416 PFPVSQSSQKSKPLLVSQSSQRSKPLP--VSQSLQNSNPFPVSQPSSNSKPFP---VSQPQP-ASNPFP-VSQPRPNSQP 488
Cdd:pfam05109 492 PSPRDNGTESKAPDMTSPTSAVTTPTPnaTSPTPAVTTPTPNATSPTLGKTSPtsaVTTPTPnATSPTPaVTTPTPNATI 571
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 489 FSMSQPSSTA---RPFPASQPPAASKSFPISQPP------TTSKPFVSQPPN--TSKPMPVSQPPTTSKPLPVSQPPPTF 557
Cdd:pfam05109 572 PTLGKTSPTSavtTPTPNATSPTVGETSPQANTTnhtlggTSSTPVVTSPPKnaTSAVTTGQHNITSSSTSSMSLRPSSI 651
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 558 QSTCPSQPPAASSSLSPLPPVFNSTQS---FQSPPVSTTPSAVPEASTIPSPPAPAPVAQPTHVFNQTPPPE-QTPKSGA 633
Cdd:pfam05109 652 SETLSPSTSDNSTSHMPLLTSAHPTGGeniTQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTSTKPGEvNVTKGTP 731
|
330
....*....|.
gi 30696783 634 ARTDSEPEVSS 644
Cdd:pfam05109 732 PKNATSPQAPS 742
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
466-602 |
5.33e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.08 E-value: 5.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 466 PVSQPQPASNPFPVSQPRPNSQPfsmsQPSSTARPFPASQPPAASKsfPISQPPTTSKPFVSQPPNTSKPMPVSQPPtts 545
Cdd:PRK14951 371 EAAAPAEKKTPARPEAAAPAAAP----VAQAAAAPAPAAAPAAAAS--APAAPPAAAPPAPVAAPAAAAPAAAPAAA--- 441
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 30696783 546 kPLPVSQPPPtfqstcpsqPPAASSSLSPLPPVfnSTQSFQSPPVSTTPSAVPEAST 602
Cdd:PRK14951 442 -PAAVALAPA---------PPAQAAPETVAIPV--RVAPEPAVASAAPAPAAAPAAA 486
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
484-594 |
5.85e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.08 E-value: 5.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 484 PNSQPFSMSQPSSTARPfPASQPPAASKsfpisQPPTTSKPFVSQPPNTSKPMPVSqPPTTSKPLPVSQPPPTFQSTCPS 563
Cdd:PRK14951 367 AAAAEAAAPAEKKTPAR-PEAAAPAAAP-----VAQAAAAPAPAAAPAAAASAPAA-PPAAAPPAPVAAPAAAAPAAAPA 439
|
90 100 110
....*....|....*....|....*....|.
gi 30696783 564 QPPAASSSLSPLPPVfnSTQSFQSPPVSTTP 594
Cdd:PRK14951 440 AAPAAVALAPAPPAQ--AAPETVAIPVRVAP 468
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
466-552 |
6.69e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 38.83 E-value: 6.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 466 PVSQPQPASNPFPVSQ-------PRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPntsKPMPV 538
Cdd:PRK11633 58 AATQALPTQPPEGAAEavragdaAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPP---APKPE 134
|
90
....*....|....
gi 30696783 539 SQPPTTSKPLPVSQ 552
Cdd:PRK11633 135 PKPVVEEKAAPTGK 148
|
|
| PRK14278 |
PRK14278 |
chaperone protein DnaJ; Provisional |
81-143 |
6.98e-03 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237654 [Multi-domain] Cd Length: 378 Bit Score: 39.65 E-value: 6.98e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30696783 81 DWYAVLRLVRLTHNPELvATQYSRLAVLLNPSRNRYPYSEQAFRLISDAWYVLSDPSRKTLYD 143
Cdd:PRK14278 4 DYYGLLGVSRNASDAEI-KRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVD 65
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
390-576 |
7.15e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.15 E-value: 7.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 390 SNPFPLSQPPSNSKPFPMSQSSQNSKPfPVSQSSQKSKPLLVSQSSQRSKPLPVSQSLQNSNPfpvSQPSSNSKPFPVSQ 469
Cdd:PHA03307 45 SDSAELAAVTVVAGAAACDRFEPPTGP-PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSP---TPPGPSSPDPPPPT 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30696783 470 PQPASNPfpvsqPRPNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKP----FVSQPPNTSKPmpvsqPPTTS 545
Cdd:PHA03307 121 PPPASPP-----PSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRqaalPLSSPEETARA-----PSSPP 190
|
170 180 190
....*....|....*....|....*....|..
gi 30696783 546 KPLPVSQPPPTFQSTCPSQ-PPAASSSLSPLP 576
Cdd:PHA03307 191 AEPPPSTPPAAASPRPPRRsSPISASASSPAP 222
|
|
| |
