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Conserved domains on  [gi|15217959|ref|NP_176137|]
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Disease resistance protein (CC-NBS-LRR class) family [Arabidopsis thaliana]

Protein Classification

NB-LRR family disease resistance protein( domain architecture ID 11605486)

NB-LRR (nucleotide-binding-leucine rich repeat) family disease resistance protein guards the plant against pathogens via an indirect interaction with an avirulence protein contained in the plant, triggering a defense response that restricts the pathogen growth

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NB-ARC super family cl26397
NB-ARC domain;
166-414 4.16e-66

NB-ARC domain;


The actual alignment was detected with superfamily member pfam00931:

Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 221.48  E-value: 4.16e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   166 EANVKKLVGYLVEKDDYQIVSLTGMGGLGKTTLARQVFN-HDVVKDRFDGFAWVSVSQEFTRISVWQTILQNLTSKErkD 244
Cdd:pfam00931   2 EDMVEKVIGKLSEKDEPGIVGIHGMGGVGKTTLAAQIFNdFDEVEGHFDSVAWVVVSKTFTISTLQQTILQNLGLSE--D 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   245 EIQNMKEADLHDDLFRLLESSKTLIVLDDIWKEEDWDLIKPIFPPKK-GWKVLLTSRTESIAMRGDTTYISFKPKCLSIP 323
Cdd:pfam00931  80 DWDNKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDREnGCRVLLTTRSEEVAGRVGGPSDPHEVELLEPD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   324 DSWTLFQSIAMPRKDTSefkvDEEMENMGKKMIKHCGGLSLAVKVLGGLLAAKYTLHDWKRLSENIGSHIVErTSGNNSS 403
Cdd:pfam00931 160 EAWELFENKVFPKTLGE----CELLEDVAKEIVEKCRGLPLALKVLGGLLSCKKTVEEWKHVYDVLQSELKS-NSYSLNS 234
                         250
                  ....*....|.
gi 15217959   404 IDHVLSVSFEE 414
Cdd:pfam00931 235 VRSILQLSYEN 245
RX-CC_like cd14798
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato ...
4-121 7.11e-28

Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato virus X resistance protein (RX) confers resistance against potato virus X. It is a member of a family of resistance proteins with a domain architecture that includes an N-terminal coiled-coil domain (modeled here), a nucleotide-binding domain, and leucine-rich repeats (CC-NB-LRR). These intracellular resistance proteins recognize pathogen effector proteins and will subsequently trigger a response that may be as severe as localized cell death. The N-terminal coiled-coil domain of RX has been shown to interact with RanGAP2, which is a necessary co-factor in the resistance response.


:

Pssm-ID: 271353 [Multi-domain]  Cd Length: 124  Bit Score: 108.86  E-value: 7.11e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   4 VSFGVEKLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKKHISEMVRHCVEEIKDIVYDTEDIIETFILK-EK 82
Cdd:cd14798   5 VSFLLEKLGELLEQEADLLSGVKEEIESLKDELESMQAFLKDADAKQDEDEELKDWVKQVRDVAYDAEDIIDSFLLKlVP 84
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 15217959  83 VEMKRGIMKRIKRFASTIMDRRELASDIGGISKRISKVI 121
Cdd:cd14798  85 DKRRGGFLKRLFSLLKELKELHQVAKEIQSIKSRIKDIS 123
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
579-730 4.67e-12

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 69.19  E-value: 4.67e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 579 LRVLDLVQAKFKggKLPSDIGKLIHLRYLSLKDAKVSHLPSSLRNLVLLIYLDIR-TDFTDIfvPNVFMGMRELRYLELp 657
Cdd:COG4886 138 LKELDLSNNQLT--DLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSnNQITDL--PEPLGNLTNLEELDL- 212
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15217959 658 rfmhEKTKL-----ELSNLEKLEALENFSTKSSSLEDLRGMVRLRTLVIilsEGTSLQTLSASvCGLRHLENFKIMEN 730
Cdd:COG4886 213 ----SGNQLtdlpePLANLTNLETLDLSNNQLTDLPELGNLTNLEELDL---SNNQLTDLPPL-ANLTNLKTLDLSNN 282
 
Name Accession Description Interval E-value
NB-ARC pfam00931
NB-ARC domain;
166-414 4.16e-66

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 221.48  E-value: 4.16e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   166 EANVKKLVGYLVEKDDYQIVSLTGMGGLGKTTLARQVFN-HDVVKDRFDGFAWVSVSQEFTRISVWQTILQNLTSKErkD 244
Cdd:pfam00931   2 EDMVEKVIGKLSEKDEPGIVGIHGMGGVGKTTLAAQIFNdFDEVEGHFDSVAWVVVSKTFTISTLQQTILQNLGLSE--D 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   245 EIQNMKEADLHDDLFRLLESSKTLIVLDDIWKEEDWDLIKPIFPPKK-GWKVLLTSRTESIAMRGDTTYISFKPKCLSIP 323
Cdd:pfam00931  80 DWDNKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDREnGCRVLLTTRSEEVAGRVGGPSDPHEVELLEPD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   324 DSWTLFQSIAMPRKDTSefkvDEEMENMGKKMIKHCGGLSLAVKVLGGLLAAKYTLHDWKRLSENIGSHIVErTSGNNSS 403
Cdd:pfam00931 160 EAWELFENKVFPKTLGE----CELLEDVAKEIVEKCRGLPLALKVLGGLLSCKKTVEEWKHVYDVLQSELKS-NSYSLNS 234
                         250
                  ....*....|.
gi 15217959   404 IDHVLSVSFEE 414
Cdd:pfam00931 235 VRSILQLSYEN 245
RX-CC_like cd14798
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato ...
4-121 7.11e-28

Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato virus X resistance protein (RX) confers resistance against potato virus X. It is a member of a family of resistance proteins with a domain architecture that includes an N-terminal coiled-coil domain (modeled here), a nucleotide-binding domain, and leucine-rich repeats (CC-NB-LRR). These intracellular resistance proteins recognize pathogen effector proteins and will subsequently trigger a response that may be as severe as localized cell death. The N-terminal coiled-coil domain of RX has been shown to interact with RanGAP2, which is a necessary co-factor in the resistance response.


Pssm-ID: 271353 [Multi-domain]  Cd Length: 124  Bit Score: 108.86  E-value: 7.11e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   4 VSFGVEKLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKKHISEMVRHCVEEIKDIVYDTEDIIETFILK-EK 82
Cdd:cd14798   5 VSFLLEKLGELLEQEADLLSGVKEEIESLKDELESMQAFLKDADAKQDEDEELKDWVKQVRDVAYDAEDIIDSFLLKlVP 84
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 15217959  83 VEMKRGIMKRIKRFASTIMDRRELASDIGGISKRISKVI 121
Cdd:cd14798  85 DKRRGGFLKRLFSLLKELKELHQVAKEIQSIKSRIKDIS 123
Rx_N pfam18052
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant ...
3-80 9.57e-21

Rx N-terminal domain; This entry represents the N-terminal domain found in many plant resistance proteins. This domain has been predicted to be a coiled-coil, however the structure shows that it adopts a four helical bundle fold.


Pssm-ID: 436239  Cd Length: 93  Bit Score: 87.71  E-value: 9.57e-21
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15217959     3 LVSFGVEKLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKKHISEMVRHCVEEIKDIVYDTEDIIETFILK 80
Cdd:pfam18052   1 AVSSLLEKLGSLLAEEAKLLKGVKDDLEKLKDELESIQAFLEDAERKQITDEQVKLWLKQLRDVAYDAEDVLDEFLYE 78
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
579-730 4.67e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 69.19  E-value: 4.67e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 579 LRVLDLVQAKFKggKLPSDIGKLIHLRYLSLKDAKVSHLPSSLRNLVLLIYLDIR-TDFTDIfvPNVFMGMRELRYLELp 657
Cdd:COG4886 138 LKELDLSNNQLT--DLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSnNQITDL--PEPLGNLTNLEELDL- 212
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15217959 658 rfmhEKTKL-----ELSNLEKLEALENFSTKSSSLEDLRGMVRLRTLVIilsEGTSLQTLSASvCGLRHLENFKIMEN 730
Cdd:COG4886 213 ----SGNQLtdlpePLANLTNLETLDLSNNQLTDLPELGNLTNLEELDL---SNNQLTDLPPL-ANLTNLKTLDLSNN 282
COG3903 COG3903
Predicted ATPase [General function prediction only];
184-508 3.03e-07

Predicted ATPase [General function prediction only];


Pssm-ID: 443109 [Multi-domain]  Cd Length: 933  Bit Score: 54.25  E-value: 3.03e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 184 IVSLTGMGGLGKTTLARQVfNHDVVkDRF-DGFAWVSVSQEFTRISVWQTILQNLTSKERKDeiqnmkeADLHDDLFRLL 262
Cdd:COG3903 178 LVTLTGPGGVGKTRLALEV-AHRLA-DRFpDGVWFVDLAGVTDPALVLAAVARALGVRDAPG-------RDPAARLRAAL 248
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 263 ESSKTLIVLDDIwkeEDW-----DLIKPIFPPKKGWKVLLTSRtESIAMRGDTTYiSFKPkcLSIPDSWT---------L 328
Cdd:COG3903 249 ADRRLLLVLDNC---EHVvdaaaALVRPLLPAAPGLRVLATSR-EPLGLPGERVL-PLPP--LAVPPPGAealaseavaL 321
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 329 FQSIAmpRKDTSEFKVDEemENMG--KKMIKHCGGLSLAVKVLGGLLAAkYTLHDwkrLSENIGSHIVERTSGNNSSIDH 406
Cdd:COG3903 322 FVERA--GAARPGFALDA--AEAAavAEICRRLDGLPLAIELAAARLRT-LSLAE---LAARLDDRLRLLTGGRRDAPPR 393
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 407 ------VLSVSFEELPNYLKHCFLYLAHFPEDheIDVEklhyywAAEGISerrryDGETIRDTGDSyIEELVRRNMVISE 480
Cdd:COG3903 394 hrtlraALDWSYDLLSPAERRLLRRLSVFPGG--FTLE------AAEAVC-----GGDGPADVLDL-LAALVDKSLLEVE 459
                       330       340
                ....*....|....*....|....*...
gi 15217959 481 RDVMTSRFetcRLHDMMREICLFKAKEE 508
Cdd:COG3903 460 GGGGGPRY---RLLETVREYAAERLAEA 484
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
550-685 2.75e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 44.84  E-value: 2.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959  550 KLRSLVVVYDDIGNrrwmLSGSI---FTRVKLLRVLDLVQAKFKGgKLPSDIGKLIHLRYLSLKDAKVS-HLPSSLRNLV 625
Cdd:PLN00113 210 QMKSLKWIYLGYNN----LSGEIpyeIGGLTSLNHLDLVYNNLTG-PIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLQ 284
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15217959  626 LLIYLDIRTDFTDIFVPNVFMGMRELRYLELprFMHE---KTKLELSNLEKLEALENFSTKSS 685
Cdd:PLN00113 285 KLISLDLSDNSLSGEIPELVIQLQNLEILHL--FSNNftgKIPVALTSLPRLQVLQLWSNKFS 345
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
153-204 4.24e-03

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 41.01  E-value: 4.24e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 15217959   153 TFSRDSEnDFVGMEANVKKLVGYL-VEKDDYQIVSLTGMGGLGKTTLARQVFN 204
Cdd:PLN03210  178 TPSNDFE-DFVGIEDHIAKMSSLLhLESEEVRMVGIWGSSGIGKTTIARALFS 229
 
Name Accession Description Interval E-value
NB-ARC pfam00931
NB-ARC domain;
166-414 4.16e-66

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 221.48  E-value: 4.16e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   166 EANVKKLVGYLVEKDDYQIVSLTGMGGLGKTTLARQVFN-HDVVKDRFDGFAWVSVSQEFTRISVWQTILQNLTSKErkD 244
Cdd:pfam00931   2 EDMVEKVIGKLSEKDEPGIVGIHGMGGVGKTTLAAQIFNdFDEVEGHFDSVAWVVVSKTFTISTLQQTILQNLGLSE--D 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   245 EIQNMKEADLHDDLFRLLESSKTLIVLDDIWKEEDWDLIKPIFPPKK-GWKVLLTSRTESIAMRGDTTYISFKPKCLSIP 323
Cdd:pfam00931  80 DWDNKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDREnGCRVLLTTRSEEVAGRVGGPSDPHEVELLEPD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   324 DSWTLFQSIAMPRKDTSefkvDEEMENMGKKMIKHCGGLSLAVKVLGGLLAAKYTLHDWKRLSENIGSHIVErTSGNNSS 403
Cdd:pfam00931 160 EAWELFENKVFPKTLGE----CELLEDVAKEIVEKCRGLPLALKVLGGLLSCKKTVEEWKHVYDVLQSELKS-NSYSLNS 234
                         250
                  ....*....|.
gi 15217959   404 IDHVLSVSFEE 414
Cdd:pfam00931 235 VRSILQLSYEN 245
RX-CC_like cd14798
Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato ...
4-121 7.11e-28

Coiled-coil domain of the potato virux X resistance protein and similar proteins; The potato virus X resistance protein (RX) confers resistance against potato virus X. It is a member of a family of resistance proteins with a domain architecture that includes an N-terminal coiled-coil domain (modeled here), a nucleotide-binding domain, and leucine-rich repeats (CC-NB-LRR). These intracellular resistance proteins recognize pathogen effector proteins and will subsequently trigger a response that may be as severe as localized cell death. The N-terminal coiled-coil domain of RX has been shown to interact with RanGAP2, which is a necessary co-factor in the resistance response.


Pssm-ID: 271353 [Multi-domain]  Cd Length: 124  Bit Score: 108.86  E-value: 7.11e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   4 VSFGVEKLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKKHISEMVRHCVEEIKDIVYDTEDIIETFILK-EK 82
Cdd:cd14798   5 VSFLLEKLGELLEQEADLLSGVKEEIESLKDELESMQAFLKDADAKQDEDEELKDWVKQVRDVAYDAEDIIDSFLLKlVP 84
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 15217959  83 VEMKRGIMKRIKRFASTIMDRRELASDIGGISKRISKVI 121
Cdd:cd14798  85 DKRRGGFLKRLFSLLKELKELHQVAKEIQSIKSRIKDIS 123
Rx_N pfam18052
Rx N-terminal domain; This entry represents the N-terminal domain found in many plant ...
3-80 9.57e-21

Rx N-terminal domain; This entry represents the N-terminal domain found in many plant resistance proteins. This domain has been predicted to be a coiled-coil, however the structure shows that it adopts a four helical bundle fold.


Pssm-ID: 436239  Cd Length: 93  Bit Score: 87.71  E-value: 9.57e-21
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15217959     3 LVSFGVEKLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKKHISEMVRHCVEEIKDIVYDTEDIIETFILK 80
Cdd:pfam18052   1 AVSSLLEKLGSLLAEEAKLLKGVKDDLEKLKDELESIQAFLEDAERKQITDEQVKLWLKQLRDVAYDAEDVLDEFLYE 78
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
579-730 4.67e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 69.19  E-value: 4.67e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 579 LRVLDLVQAKFKggKLPSDIGKLIHLRYLSLKDAKVSHLPSSLRNLVLLIYLDIR-TDFTDIfvPNVFMGMRELRYLELp 657
Cdd:COG4886 138 LKELDLSNNQLT--DLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSnNQITDL--PEPLGNLTNLEELDL- 212
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15217959 658 rfmhEKTKL-----ELSNLEKLEALENFSTKSSSLEDLRGMVRLRTLVIilsEGTSLQTLSASvCGLRHLENFKIMEN 730
Cdd:COG4886 213 ----SGNQLtdlpePLANLTNLETLDLSNNQLTDLPELGNLTNLEELDL---SNNQLTDLPPL-ANLTNLKTLDLSNN 282
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
573-782 6.87e-11

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 65.34  E-value: 6.87e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 573 FTRVKLLRVLDLVQAKFKggKLPSDIGKLIHLRYLSLKDAKVSHLPSSLRNLVLLIYLDIR-TDFTDIfvPNVFMGMREL 651
Cdd:COG4886 109 LSNLTNLESLDLSGNQLT--DLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSnNQLTDL--PEELGNLTNL 184
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 652 RYLELprfmhEKTKL-----ELSNLEKLEALenfstksssleDLRGMvRLRTLVIILSEGTSLQTLSASVCGLRHLENFK 726
Cdd:COG4886 185 KELDL-----SNNQItdlpePLGNLTNLEEL-----------DLSGN-QLTDLPEPLANLTNLETLDLSNNQLTDLPELG 247
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 15217959 727 imenagvnrmgeermvlDFTYLKKLTLS---IEmpRLPKIQHLPShLTVLDLSYCCLEE 782
Cdd:COG4886 248 -----------------NLTNLEELDLSnnqLT--DLPPLANLTN-LKTLDLSNNQLTD 286
COG3903 COG3903
Predicted ATPase [General function prediction only];
184-508 3.03e-07

Predicted ATPase [General function prediction only];


Pssm-ID: 443109 [Multi-domain]  Cd Length: 933  Bit Score: 54.25  E-value: 3.03e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 184 IVSLTGMGGLGKTTLARQVfNHDVVkDRF-DGFAWVSVSQEFTRISVWQTILQNLTSKERKDeiqnmkeADLHDDLFRLL 262
Cdd:COG3903 178 LVTLTGPGGVGKTRLALEV-AHRLA-DRFpDGVWFVDLAGVTDPALVLAAVARALGVRDAPG-------RDPAARLRAAL 248
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 263 ESSKTLIVLDDIwkeEDW-----DLIKPIFPPKKGWKVLLTSRtESIAMRGDTTYiSFKPkcLSIPDSWT---------L 328
Cdd:COG3903 249 ADRRLLLVLDNC---EHVvdaaaALVRPLLPAAPGLRVLATSR-EPLGLPGERVL-PLPP--LAVPPPGAealaseavaL 321
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 329 FQSIAmpRKDTSEFKVDEemENMG--KKMIKHCGGLSLAVKVLGGLLAAkYTLHDwkrLSENIGSHIVERTSGNNSSIDH 406
Cdd:COG3903 322 FVERA--GAARPGFALDA--AEAAavAEICRRLDGLPLAIELAAARLRT-LSLAE---LAARLDDRLRLLTGGRRDAPPR 393
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959 407 ------VLSVSFEELPNYLKHCFLYLAHFPEDheIDVEklhyywAAEGISerrryDGETIRDTGDSyIEELVRRNMVISE 480
Cdd:COG3903 394 hrtlraALDWSYDLLSPAERRLLRRLSVFPGG--FTLE------AAEAVC-----GGDGPADVLDL-LAALVDKSLLEVE 459
                       330       340
                ....*....|....*....|....*...
gi 15217959 481 RDVMTSRFetcRLHDMMREICLFKAKEE 508
Cdd:COG3903 460 GGGGGPRY---RLLETVREYAAERLAEA 484
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
550-685 2.75e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 44.84  E-value: 2.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959  550 KLRSLVVVYDDIGNrrwmLSGSI---FTRVKLLRVLDLVQAKFKGgKLPSDIGKLIHLRYLSLKDAKVS-HLPSSLRNLV 625
Cdd:PLN00113 210 QMKSLKWIYLGYNN----LSGEIpyeIGGLTSLNHLDLVYNNLTG-PIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLQ 284
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15217959  626 LLIYLDIRTDFTDIFVPNVFMGMRELRYLELprFMHE---KTKLELSNLEKLEALENFSTKSS 685
Cdd:PLN00113 285 KLISLDLSDNSLSGEIPELVIQLQNLEILHL--FSNNftgKIPVALTSLPRLQVLQLWSNKFS 345
AAA_16 pfam13191
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ...
162-283 7.40e-04

AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.


Pssm-ID: 433025 [Multi-domain]  Cd Length: 167  Bit Score: 41.34  E-value: 7.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15217959   162 FVGMEANVKKLVGYL--VEKDDYQIVSLTGMGGLGKTTLARQVFNH------DVVKDRFDGFA-WVSVSQEFTRISVWQT 232
Cdd:pfam13191   2 LVGREEELEQLLDALdrVRSGRPPSVLLTGEAGTGKTTLLRELLRAlerdggYFLRGKCDENLpYSPLLEALTREGLLRQ 81
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15217959   233 ILQNLTSKERKD-------------EIQNMKEADLHDDLFRLLESSK-----TLIVLDDI-W-KEEDWDLI 283
Cdd:pfam13191  82 LLDELESSLLEAwraallealapvpELPGDLAERLLDLLLRLLDLLArgerpLVLVLDDLqWaDEASLQLL 152
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
153-204 4.24e-03

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 41.01  E-value: 4.24e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 15217959   153 TFSRDSEnDFVGMEANVKKLVGYL-VEKDDYQIVSLTGMGGLGKTTLARQVFN 204
Cdd:PLN03210  178 TPSNDFE-DFVGIEDHIAKMSSLLhLESEEVRMVGIWGSSGIGKTTIARALFS 229
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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