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Conserved domains on  [gi|240254258|ref|NP_175770|]
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nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

Protein Classification

triose-phosphate transporter family protein( domain architecture ID 1750314)

triose-phosphate transporter (TPT) family protein belongs to the drug/metabolite transporter (DMT) superfamily; similar to the well-characterized triose phosphate and sugar phosphate permeases of chloroplasts and its functionally uncharacterized homologs found in yeast and animals

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TPT_S35C2 super family cl40580
solute carrier family 35 member C2, member of the triose-phosphate transporter family; Solute ...
85-307 1.07e-18

solute carrier family 35 member C2, member of the triose-phosphate transporter family; Solute carrier family 35 member C2 (S35C2 or Slc35c2), also called ovarian cancer-overexpressed gene 1 protein (OVCOV1), is a member of the triose-phosphate transporter (TPT) family, which is part of the drug/metabolite transporter (DMT) superfamily. It may function either as a GDP-fucose transporter that competes with Slc35c1 (S35C1) for GDP-fucose, or a factor that otherwise enhances the fucosylation of Notch and is required for optimal Notch signaling in mammalian cells.


The actual alignment was detected with superfamily member cd21092:

Pssm-ID: 411044  Cd Length: 248  Bit Score: 83.86  E-value: 1.07e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  85 YVTSVIPIGAMFAMTLWLGNTAYLYITVAFSQMLKAimPVAVFILG--VCVGLEIMSCKMLLIMSVISFGVLVSSYGELN 162
Cdd:cd21092    4 YLKRVAPTGLASALDIGLSNWSFLFITVSLYTMTKS--SAIIFILFfsLVFKLEKPRWSLVLVVLLIAGGLFMFTYKSTQ 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 163 INWVGVVYQMGGIVSEALRLILMEILVKRKGIKL-NPLSLMYYMSPCSAICLFIPWIFLEKSKMDT----WNFH------ 231
Cdd:cd21092   82 FNLEGFILVLSASFLGGLRWTLAQLLMQKAELGLqNPIDMMYHLQPWMILGLLPLAIGFEGLHLATseklFRFHdssvll 161
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 240254258 232 --VLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDwLVVLVSALLFAETKLTIINLFGYAVAIVGVATYNNHK 307
Cdd:cd21092  162 rtLGYLLLGAVLAFGLEFSEFLLVSKTSSLTLSIAGIFKE-ICTLLLAVHINGDHLSLLNWLGLVICLCGISLHVVLK 238
 
Name Accession Description Interval E-value
TPT_S35C2 cd21092
solute carrier family 35 member C2, member of the triose-phosphate transporter family; Solute ...
85-307 1.07e-18

solute carrier family 35 member C2, member of the triose-phosphate transporter family; Solute carrier family 35 member C2 (S35C2 or Slc35c2), also called ovarian cancer-overexpressed gene 1 protein (OVCOV1), is a member of the triose-phosphate transporter (TPT) family, which is part of the drug/metabolite transporter (DMT) superfamily. It may function either as a GDP-fucose transporter that competes with Slc35c1 (S35C1) for GDP-fucose, or a factor that otherwise enhances the fucosylation of Notch and is required for optimal Notch signaling in mammalian cells.


Pssm-ID: 411044  Cd Length: 248  Bit Score: 83.86  E-value: 1.07e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  85 YVTSVIPIGAMFAMTLWLGNTAYLYITVAFSQMLKAimPVAVFILG--VCVGLEIMSCKMLLIMSVISFGVLVSSYGELN 162
Cdd:cd21092    4 YLKRVAPTGLASALDIGLSNWSFLFITVSLYTMTKS--SAIIFILFfsLVFKLEKPRWSLVLVVLLIAGGLFMFTYKSTQ 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 163 INWVGVVYQMGGIVSEALRLILMEILVKRKGIKL-NPLSLMYYMSPCSAICLFIPWIFLEKSKMDT----WNFH------ 231
Cdd:cd21092   82 FNLEGFILVLSASFLGGLRWTLAQLLMQKAELGLqNPIDMMYHLQPWMILGLLPLAIGFEGLHLATseklFRFHdssvll 161
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 240254258 232 --VLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDwLVVLVSALLFAETKLTIINLFGYAVAIVGVATYNNHK 307
Cdd:cd21092  162 rtLGYLLLGAVLAFGLEFSEFLLVSKTSSLTLSIAGIFKE-ICTLLLAVHINGDHLSLLNWLGLVICLCGISLHVVLK 238
TPT pfam03151
Triose-phosphate Transporter family; This family includes transporters with a specificity for ...
22-304 2.22e-18

Triose-phosphate Transporter family; This family includes transporters with a specificity for triose phosphate.


Pssm-ID: 308657 [Multi-domain]  Cd Length: 290  Bit Score: 83.88  E-value: 2.22e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258   22 LLYITLSSGQIFFNKWVLSSkeinFPYPLGLTLLHMTFSSVLC--FLLTKVFKVMKVEEGmtleiYVTSVIPIGAMFAMT 99
Cdd:pfam03151   8 GLWYFLNIYFNIYNKKILNA----FPYPMTVSSVQLFVGSVYIlvLWGTGLRKRPKISSP-----FLKNILPLALCHTLG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  100 LWLGNTAYLYITVAFSQMLKAIMPVAVFILGVCVGLEIMSCKMLLIMSVISFGVLVSSYGELNINWVGVVYQMGGIVSEA 179
Cdd:pfam03151  79 HVLANVSLGKVAVSFTHTVKAMEPFFTVILSRLFLGEYPPLLVYLSLLPIVGGVALASVTELSFNWIGFISAMISNLGFS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  180 LRLILMEILVKRKGIkLNPLSLMYYMSPCSAICLFIPWIFLEKSKMDT---------WNFHVLVLSLNSLCTFALNLSVF 250
Cdd:pfam03151 159 LRNIFSKKLMKGKDN-LDNLNLFAIITILSLLLLLPVWLLVEGFKKFPsllqsgkvgLKDVYMLLLLSGVCFHLYNQVAY 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 240254258  251 LVISRTSALTIRIAGVVKDwLVVLVSALLFAETKLTIINLFGYAVAIVGVATYN 304
Cdd:pfam03151 238 MILERVSPVTHSVANTVKR-VVVIVSSILVFGNPVSPLNAIGTAIAIAGVFLYS 290
tpt TIGR00817
Tpt phosphate/phosphoenolpyruvate translocator; The 6-8 TMS Triose-phosphate Transporter (TPT) ...
46-303 1.79e-10

Tpt phosphate/phosphoenolpyruvate translocator; The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap. [Hypothetical proteins, Conserved]


Pssm-ID: 129898 [Multi-domain]  Cd Length: 302  Bit Score: 60.89  E-value: 1.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258   46 FPYPLGLTLLHMTFSSVLCFL--LTKVFKVMKVEEGMtleiyVTSVIPIGAMFAMTLWLGNTAYLYITVAFSQMLKAIMP 123
Cdd:TIGR00817  28 FPYPYFKTLISLAVGSLYCLLswSSGLPKRLKISSAL-----LKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEP 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  124 VAVFILGVCVGLEIMSCKMLLIMSVISFGVLVSSYGELNINWVGVVYQMGGIVSEALRLILMEILVKRKgiKLNPLSLMY 203
Cdd:TIGR00817 103 FFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIK--SLDKTNLYA 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  204 YMSPCSAICLFIPWIFLEKSKMDTWNFHVLVLSLN------------SLCTFALNLSVFLVISRTSALTIRIAGVVKDWL 271
Cdd:TIGR00817 181 YISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNvtkiytvslvaaMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVV 260
                         250       260       270
                  ....*....|....*....|....*....|..
gi 240254258  272 VVLVSALLFaETKLTIINLFGYAVAIVGVATY 303
Cdd:TIGR00817 261 VIVVSILFF-GTKISPQQVFGTGIAIAGVFLY 291
PTZ00343 PTZ00343
triose or hexose phosphate/phosphate translocator; Provisional
81-303 1.10e-09

triose or hexose phosphate/phosphate translocator; Provisional


Pssm-ID: 240371 [Multi-domain]  Cd Length: 350  Bit Score: 58.98  E-value: 1.10e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  81 TLEIYVTSVIP---------IGAMFAMTLWlgntaylyiTVAFSQMLKAIMPVAVFILGVCVGLEIMSCKMLLIMSVISF 151
Cdd:PTZ00343 109 SLKLFLKNFLPqglchlfvhFGAVISMGLG---------AVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVG 179
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 152 GVLVSSYGELNINWVGVVYQMGGIVSEALRLILMEILVKRK---GIKLNPLSLMYYMSPCSA-ICLFIPWIFLEK----- 222
Cdd:PTZ00343 180 GVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKseiGENLTASNIYMLLTLIASlISLPLVLFFEGKkwvpv 259
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 223 -----SKMDTWNFHVLVLS--LNSLCTFALNLSVFLVISRTSALTIRIAGVVKDwLVVLVSALLFAETKLTIINLFGYAV 295
Cdd:PTZ00343 260 wtnytANMTNYTKGIIIFKifFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKR-VVIIVSSIIIFQTQVTLLGYLGMAV 338

                 ....*...
gi 240254258 296 AIVGVATY 303
Cdd:PTZ00343 339 AILGALLY 346
RhaT COG0697
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and ...
49-301 9.66e-07

Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only];


Pssm-ID: 440461 [Multi-domain]  Cd Length: 290  Bit Score: 49.46  E-value: 9.66e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  49 PLGLTLLHMTFSSVLCFLLtkVFKVMKVEEGMTLEIYVTSVIPIGAMFAMTLWLGNTAYLYITVAFSQMLKAIMPVAVFI 128
Cdd:COG0697   31 PLQLAFLRFLLAALLLLPL--LLLRGRRLPPLSRRDWLLLLLRGLLGLALAFLLFFLALQYTPAALAALLLALAPLFVAL 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 129 LGVCVGLEIMSCKMLLIMSVISFGVLV---SSYGELNINWVGVVYQMGGIVSEALRLILmeilVKRKGIKLNPLSLMYYM 205
Cdd:COG0697  109 LAALLLGERLSRRRWLGLLLGFAGVLLivgPGGGGGGGSLLGDLLALLAALSWALYTVL----TRRLSRRLDPLTLTFWQ 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 206 SPCSAICLFIPWIFLEKSKMDTWNFHVLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDWLVVLVSALLFAETkL 285
Cdd:COG0697  185 MLVGALLLLPLALLTGLPLPLSAAAWLALLYLGLFGTALAYLLWFRALRRLGASRAAPLTYLEPVFAVLLGWLLLGEP-L 263
                        250
                 ....*....|....*.
gi 240254258 286 TIINLFGYAVAIVGVA 301
Cdd:COG0697  264 TPLQLLGAALILAGVL 279
 
Name Accession Description Interval E-value
TPT_S35C2 cd21092
solute carrier family 35 member C2, member of the triose-phosphate transporter family; Solute ...
85-307 1.07e-18

solute carrier family 35 member C2, member of the triose-phosphate transporter family; Solute carrier family 35 member C2 (S35C2 or Slc35c2), also called ovarian cancer-overexpressed gene 1 protein (OVCOV1), is a member of the triose-phosphate transporter (TPT) family, which is part of the drug/metabolite transporter (DMT) superfamily. It may function either as a GDP-fucose transporter that competes with Slc35c1 (S35C1) for GDP-fucose, or a factor that otherwise enhances the fucosylation of Notch and is required for optimal Notch signaling in mammalian cells.


Pssm-ID: 411044  Cd Length: 248  Bit Score: 83.86  E-value: 1.07e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  85 YVTSVIPIGAMFAMTLWLGNTAYLYITVAFSQMLKAimPVAVFILG--VCVGLEIMSCKMLLIMSVISFGVLVSSYGELN 162
Cdd:cd21092    4 YLKRVAPTGLASALDIGLSNWSFLFITVSLYTMTKS--SAIIFILFfsLVFKLEKPRWSLVLVVLLIAGGLFMFTYKSTQ 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 163 INWVGVVYQMGGIVSEALRLILMEILVKRKGIKL-NPLSLMYYMSPCSAICLFIPWIFLEKSKMDT----WNFH------ 231
Cdd:cd21092   82 FNLEGFILVLSASFLGGLRWTLAQLLMQKAELGLqNPIDMMYHLQPWMILGLLPLAIGFEGLHLATseklFRFHdssvll 161
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 240254258 232 --VLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDwLVVLVSALLFAETKLTIINLFGYAVAIVGVATYNNHK 307
Cdd:cd21092  162 rtLGYLLLGAVLAFGLEFSEFLLVSKTSSLTLSIAGIFKE-ICTLLLAVHINGDHLSLLNWLGLVICLCGISLHVVLK 238
TPT pfam03151
Triose-phosphate Transporter family; This family includes transporters with a specificity for ...
22-304 2.22e-18

Triose-phosphate Transporter family; This family includes transporters with a specificity for triose phosphate.


Pssm-ID: 308657 [Multi-domain]  Cd Length: 290  Bit Score: 83.88  E-value: 2.22e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258   22 LLYITLSSGQIFFNKWVLSSkeinFPYPLGLTLLHMTFSSVLC--FLLTKVFKVMKVEEGmtleiYVTSVIPIGAMFAMT 99
Cdd:pfam03151   8 GLWYFLNIYFNIYNKKILNA----FPYPMTVSSVQLFVGSVYIlvLWGTGLRKRPKISSP-----FLKNILPLALCHTLG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  100 LWLGNTAYLYITVAFSQMLKAIMPVAVFILGVCVGLEIMSCKMLLIMSVISFGVLVSSYGELNINWVGVVYQMGGIVSEA 179
Cdd:pfam03151  79 HVLANVSLGKVAVSFTHTVKAMEPFFTVILSRLFLGEYPPLLVYLSLLPIVGGVALASVTELSFNWIGFISAMISNLGFS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  180 LRLILMEILVKRKGIkLNPLSLMYYMSPCSAICLFIPWIFLEKSKMDT---------WNFHVLVLSLNSLCTFALNLSVF 250
Cdd:pfam03151 159 LRNIFSKKLMKGKDN-LDNLNLFAIITILSLLLLLPVWLLVEGFKKFPsllqsgkvgLKDVYMLLLLSGVCFHLYNQVAY 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 240254258  251 LVISRTSALTIRIAGVVKDwLVVLVSALLFAETKLTIINLFGYAVAIVGVATYN 304
Cdd:pfam03151 238 MILERVSPVTHSVANTVKR-VVVIVSSILVFGNPVSPLNAIGTAIAIAGVFLYS 290
tpt TIGR00817
Tpt phosphate/phosphoenolpyruvate translocator; The 6-8 TMS Triose-phosphate Transporter (TPT) ...
46-303 1.79e-10

Tpt phosphate/phosphoenolpyruvate translocator; The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap. [Hypothetical proteins, Conserved]


Pssm-ID: 129898 [Multi-domain]  Cd Length: 302  Bit Score: 60.89  E-value: 1.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258   46 FPYPLGLTLLHMTFSSVLCFL--LTKVFKVMKVEEGMtleiyVTSVIPIGAMFAMTLWLGNTAYLYITVAFSQMLKAIMP 123
Cdd:TIGR00817  28 FPYPYFKTLISLAVGSLYCLLswSSGLPKRLKISSAL-----LKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEP 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  124 VAVFILGVCVGLEIMSCKMLLIMSVISFGVLVSSYGELNINWVGVVYQMGGIVSEALRLILMEILVKRKgiKLNPLSLMY 203
Cdd:TIGR00817 103 FFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIK--SLDKTNLYA 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  204 YMSPCSAICLFIPWIFLEKSKMDTWNFHVLVLSLN------------SLCTFALNLSVFLVISRTSALTIRIAGVVKDWL 271
Cdd:TIGR00817 181 YISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNvtkiytvslvaaMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVV 260
                         250       260       270
                  ....*....|....*....|....*....|..
gi 240254258  272 VVLVSALLFaETKLTIINLFGYAVAIVGVATY 303
Cdd:TIGR00817 261 VIVVSILFF-GTKISPQQVFGTGIAIAGVFLY 291
PTZ00343 PTZ00343
triose or hexose phosphate/phosphate translocator; Provisional
81-303 1.10e-09

triose or hexose phosphate/phosphate translocator; Provisional


Pssm-ID: 240371 [Multi-domain]  Cd Length: 350  Bit Score: 58.98  E-value: 1.10e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  81 TLEIYVTSVIP---------IGAMFAMTLWlgntaylyiTVAFSQMLKAIMPVAVFILGVCVGLEIMSCKMLLIMSVISF 151
Cdd:PTZ00343 109 SLKLFLKNFLPqglchlfvhFGAVISMGLG---------AVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVG 179
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 152 GVLVSSYGELNINWVGVVYQMGGIVSEALRLILMEILVKRK---GIKLNPLSLMYYMSPCSA-ICLFIPWIFLEK----- 222
Cdd:PTZ00343 180 GVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKseiGENLTASNIYMLLTLIASlISLPLVLFFEGKkwvpv 259
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 223 -----SKMDTWNFHVLVLS--LNSLCTFALNLSVFLVISRTSALTIRIAGVVKDwLVVLVSALLFAETKLTIINLFGYAV 295
Cdd:PTZ00343 260 wtnytANMTNYTKGIIIFKifFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKR-VVIIVSSIIIFQTQVTLLGYLGMAV 338

                 ....*...
gi 240254258 296 AIVGVATY 303
Cdd:PTZ00343 339 AILGALLY 346
RhaT COG0697
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and ...
49-301 9.66e-07

Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only];


Pssm-ID: 440461 [Multi-domain]  Cd Length: 290  Bit Score: 49.46  E-value: 9.66e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258  49 PLGLTLLHMTFSSVLCFLLtkVFKVMKVEEGMTLEIYVTSVIPIGAMFAMTLWLGNTAYLYITVAFSQMLKAIMPVAVFI 128
Cdd:COG0697   31 PLQLAFLRFLLAALLLLPL--LLLRGRRLPPLSRRDWLLLLLRGLLGLALAFLLFFLALQYTPAALAALLLALAPLFVAL 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 129 LGVCVGLEIMSCKMLLIMSVISFGVLV---SSYGELNINWVGVVYQMGGIVSEALRLILmeilVKRKGIKLNPLSLMYYM 205
Cdd:COG0697  109 LAALLLGERLSRRRWLGLLLGFAGVLLivgPGGGGGGGSLLGDLLALLAALSWALYTVL----TRRLSRRLDPLTLTFWQ 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240254258 206 SPCSAICLFIPWIFLEKSKMDTWNFHVLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDWLVVLVSALLFAETkL 285
Cdd:COG0697  185 MLVGALLLLPLALLTGLPLPLSAAAWLALLYLGLFGTALAYLLWFRALRRLGASRAAPLTYLEPVFAVLLGWLLLGEP-L 263
                        250
                 ....*....|....*.
gi 240254258 286 TIINLFGYAVAIVGVA 301
Cdd:COG0697  264 TPLQLLGAALILAGVL 279
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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