|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06126 |
PRK06126 |
hypothetical protein; Provisional |
48-686 |
4.45e-84 |
|
hypothetical protein; Provisional
Pssm-ID: 235704 [Multi-domain] Cd Length: 545 Bit Score: 275.72 E-value: 4.45e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 48 PVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEEIERSQPPVDLWRKFIYCTSL 127
Cdd:PRK06126 9 PVLIVGGGPVGLALALDLGRRGVDSILVERKDGTAFNPKANTTSARSMEHFRRL-GIADEVRSAGLPVDYPTDIAYFTRL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 128 SGSTLGTVDHmqPQDFEKVVSPASVAHF----------SQYKLTNLLLKrledlgfHVRGSkesdgleaDSVvarQILMG 197
Cdd:PRK06126 88 TGYELARFRL--PSAREAITPVGGPDGSwpspelphriPQKYLEPILLE-------HAAAQ--------PGV---TLRYG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 198 HECVGIDANKDSITATVSFLKGGKhmKRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKLVSVHFMSRELGEyLISNR 277
Cdd:PRK06126 148 HRLTDFEQDADGVTATVEDLDGGE--SLTIRADYLVGCDGARSAVRRSLGISYEGTSGLQRDLSIYIRAPGLAA-LVGHD 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 278 PGMLFFIFNTDGIGVLVAHDLlQGEFVLQIPYyppqQSLSDFSPEM--CKMLIFNLVGHELsDLDVADIKPWVMHAEVAE 355
Cdd:PRK06126 225 PAWMYWLFNPDRRGVLVAIDG-RDEWLFHQLR----GGEDEFTIDDvdARAFVRRGVGEDI-DYEVLSVVPWTGRRLVAD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 356 KFMccENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIALSNTslsvqnfRAAM 435
Cdd:PRK06126 299 SYR--RGRVFLAGDAAHLFTPTGGYGMNTGIGDAVNLAWKLAAVLNGWAGPALLDSYEAERRPIAARNT-------DYAR 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 436 SVPSALGLDPTVANsvhrfinktVGSILPTGlqkailDNVFALGRAQLSESLLNESNPLGNQrlsrlksifeggkslqlq 515
Cdd:PRK06126 370 RNADALGSFPVPPE---------IEDDGPAG------DAARRKVGDALSEHARQEFNSPGIT------------------ 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 516 fpaedLGFRYlEG--AIVPDneseaGDPEvPSGRRRDYVPCAEPGSRLPHMYvkiLSDStreviVSTLDLVSTEKVefLL 593
Cdd:PRK06126 417 -----LGYRY-DGspIIVPD-----GTPP-PPDDPGVYVPSACPGGRAPHAW---LSDG-----RSLYDLFGPGFT--LL 474
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 594 IISPLQESYELAHATFkvakefmASVKVCVvwpssddglerksnsalapweNYVDVmevkkqngEGTSWWSickMSERGS 673
Cdd:PRK06126 475 RFGDAAVDVAPLEAAA-------AALGVPL---------------------AVVDL--------PGPEAAA---LYEADL 515
|
650
....*....|...
gi 79351534 674 ILVRPDQHIAWRA 686
Cdd:PRK06126 516 VLVRPDQHVAWRG 528
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
46-420 |
1.69e-78 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 254.94 E-value: 1.69e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 46 KLPVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEEIERSQPPVDLWRKFIYCT 125
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQA-GLEDRILAEGVPHEGMGLAFYNT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 126 slsgstlgtvDHMQPQDFEkvVSPASVAHFSQYKLTNLLLKRLEDLGFhvrgskesdgleadsvvarQILMGHECVGIDA 205
Cdd:pfam01494 80 ----------RRRADLDFL--TSPPRVTVYPQTELEPILVEHAEARGA-------------------QVRFGTEVLSLEQ 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 206 NKDSITATVSFLKGGKHmkRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQ-KLVSVHFMSRELGEYLisNRPGMLFFI 284
Cdd:pfam01494 129 DGDGVTAVVRDRRDGEE--YTVRAKYLVGCDGGRSPVRKTLGIEFEGFEGVPfGSLDVLFDAPDLSDPV--ERAFVHYLI 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 285 FNTD--GIGVLVAHDLLQGEFVLQIPYYPPQ-QSLSDFSPEMCKMLIFNLVGHELSDLDVADIKPWVMHAEVAEKFMccE 361
Cdd:pfam01494 205 YAPHsrGFMVGPWRSAGRERYYVQVPWDEEVeERPEEFTDEELKQRLRSIVGIDLALVEILWKSIWGVASRVATRYR--K 282
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 79351534 362 NRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIA 420
Cdd:pfam01494 283 GRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLAAVLRGQAGESLLDTYSAERLPVA 341
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
48-436 |
4.06e-58 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 199.78 E-value: 4.06e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 48 PVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEEI-ERSQPpvdlWRKFIYCTS 126
Cdd:COG0654 5 DVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRL-GLWDRLlARGAP----IRGIRVRDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 127 LSGSTLGTVdhmqpqDFEKVVSPASVaHFSQYKLTNLLLKRLEDLGFHVRgskesdgleadsvvarqilMGHECVGIDAN 206
Cdd:COG0654 80 SDGRVLARF------DAAETGLPAGL-VVPRADLERALLEAARALGVELR-------------------FGTEVTGLEQD 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 207 KDSITATvsfLKGGKHmkrnIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKLVSVHfmsrelgeylisnrpgmlffifn 286
Cdd:COG0654 134 ADGVTVT---LADGRT----LRADLVVGADGARSAVRRLLGIGFTGRDYPQRALWAG----------------------- 183
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 287 tdgigvlVAHDLLqgefvlqipyyppqQSLSDFSPEMCKMlifnlvghelsdLDVADIKPWVMHAEVAEKFmcCENRVIL 366
Cdd:COG0654 184 -------VRTELR--------------ARLAAAGPRLGEL------------LELSPRSAFPLRRRRAERW--RRGRVVL 228
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 367 AGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIALSNTSLSVQNFRAAMS 436
Cdd:COG0654 229 LGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDDEAALARYERERRPRAARVQRAADALGRLFHP 298
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
49-418 |
2.70e-14 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 75.32 E-value: 2.70e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDkATSFSKHPQAHF------INNRSMEIFRELDglaeeiersqppvdLWRKfi 122
Cdd:TIGR01988 2 IVIVGGGMVGLALALALARSGLKVALIE-ATPLPAPADPGFdnrvsaLSAASIRLLEKLG--------------VWDK-- 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 123 yctslsgstlgtVDHMQPQDFEKV-----VSPASVaHFSQYKLTnlllkrLEDLGFHVRGSKESDGLEadSVVARQ---- 193
Cdd:TIGR01988 65 ------------IEPARAQPIRDIhvsdgGSFGAL-RFDADEIG------LEALGYVVENRVLQQALW--ERLQELpnvt 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 194 ILMGHECVGIDANKDSITATvsfLKGGkhmkRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKlvsvhfmsrelgeyl 273
Cdd:TIGR01988 124 LLCPARVVELPRHSDHVELT---LDDG----QQLRARLLVGADGANSKVRQLAGIPTTGWDYGQS--------------- 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 274 isnrpgMLFFIFNTDgigvlVAHD-------LLQGEFVLqIPYYPPQQSL--SDfSPEMCKMLIfNL------------V 332
Cdd:TIGR01988 182 ------AVVANVKHE-----RPHQgtawerfTPTGPLAL-LPLPDNRSSLvwTL-PPEEAERLL-ALsdeeflaelqraF 247
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 333 GHELSDL-DVADIKPWVMHAEVAEKFmcCENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQ-----GSANS 406
Cdd:TIGR01988 248 GSRLGAItLVGERHAFPLSLTHAKRY--VAPRLALIGDAAHTIHPLAGQGLNLGLRDVAALAEVLEDARRrgediGSLRV 325
|
410
....*....|..
gi 79351534 407 siLKTYETERRP 418
Cdd:TIGR01988 326 --LQRYERRRRF 335
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06126 |
PRK06126 |
hypothetical protein; Provisional |
48-686 |
4.45e-84 |
|
hypothetical protein; Provisional
Pssm-ID: 235704 [Multi-domain] Cd Length: 545 Bit Score: 275.72 E-value: 4.45e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 48 PVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEEIERSQPPVDLWRKFIYCTSL 127
Cdd:PRK06126 9 PVLIVGGGPVGLALALDLGRRGVDSILVERKDGTAFNPKANTTSARSMEHFRRL-GIADEVRSAGLPVDYPTDIAYFTRL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 128 SGSTLGTVDHmqPQDFEKVVSPASVAHF----------SQYKLTNLLLKrledlgfHVRGSkesdgleaDSVvarQILMG 197
Cdd:PRK06126 88 TGYELARFRL--PSAREAITPVGGPDGSwpspelphriPQKYLEPILLE-------HAAAQ--------PGV---TLRYG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 198 HECVGIDANKDSITATVSFLKGGKhmKRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKLVSVHFMSRELGEyLISNR 277
Cdd:PRK06126 148 HRLTDFEQDADGVTATVEDLDGGE--SLTIRADYLVGCDGARSAVRRSLGISYEGTSGLQRDLSIYIRAPGLAA-LVGHD 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 278 PGMLFFIFNTDGIGVLVAHDLlQGEFVLQIPYyppqQSLSDFSPEM--CKMLIFNLVGHELsDLDVADIKPWVMHAEVAE 355
Cdd:PRK06126 225 PAWMYWLFNPDRRGVLVAIDG-RDEWLFHQLR----GGEDEFTIDDvdARAFVRRGVGEDI-DYEVLSVVPWTGRRLVAD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 356 KFMccENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIALSNTslsvqnfRAAM 435
Cdd:PRK06126 299 SYR--RGRVFLAGDAAHLFTPTGGYGMNTGIGDAVNLAWKLAAVLNGWAGPALLDSYEAERRPIAARNT-------DYAR 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 436 SVPSALGLDPTVANsvhrfinktVGSILPTGlqkailDNVFALGRAQLSESLLNESNPLGNQrlsrlksifeggkslqlq 515
Cdd:PRK06126 370 RNADALGSFPVPPE---------IEDDGPAG------DAARRKVGDALSEHARQEFNSPGIT------------------ 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 516 fpaedLGFRYlEG--AIVPDneseaGDPEvPSGRRRDYVPCAEPGSRLPHMYvkiLSDStreviVSTLDLVSTEKVefLL 593
Cdd:PRK06126 417 -----LGYRY-DGspIIVPD-----GTPP-PPDDPGVYVPSACPGGRAPHAW---LSDG-----RSLYDLFGPGFT--LL 474
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 594 IISPLQESYELAHATFkvakefmASVKVCVvwpssddglerksnsalapweNYVDVmevkkqngEGTSWWSickMSERGS 673
Cdd:PRK06126 475 RFGDAAVDVAPLEAAA-------AALGVPL---------------------AVVDL--------PGPEAAA---LYEADL 515
|
650
....*....|...
gi 79351534 674 ILVRPDQHIAWRA 686
Cdd:PRK06126 516 VLVRPDQHVAWRG 528
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
46-420 |
1.69e-78 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 254.94 E-value: 1.69e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 46 KLPVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEEIERSQPPVDLWRKFIYCT 125
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQA-GLEDRILAEGVPHEGMGLAFYNT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 126 slsgstlgtvDHMQPQDFEkvVSPASVAHFSQYKLTNLLLKRLEDLGFhvrgskesdgleadsvvarQILMGHECVGIDA 205
Cdd:pfam01494 80 ----------RRRADLDFL--TSPPRVTVYPQTELEPILVEHAEARGA-------------------QVRFGTEVLSLEQ 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 206 NKDSITATVSFLKGGKHmkRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQ-KLVSVHFMSRELGEYLisNRPGMLFFI 284
Cdd:pfam01494 129 DGDGVTAVVRDRRDGEE--YTVRAKYLVGCDGGRSPVRKTLGIEFEGFEGVPfGSLDVLFDAPDLSDPV--ERAFVHYLI 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 285 FNTD--GIGVLVAHDLLQGEFVLQIPYYPPQ-QSLSDFSPEMCKMLIFNLVGHELSDLDVADIKPWVMHAEVAEKFMccE 361
Cdd:pfam01494 205 YAPHsrGFMVGPWRSAGRERYYVQVPWDEEVeERPEEFTDEELKQRLRSIVGIDLALVEILWKSIWGVASRVATRYR--K 282
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 79351534 362 NRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIA 420
Cdd:pfam01494 283 GRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLAAVLRGQAGESLLDTYSAERLPVA 341
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
48-436 |
4.06e-58 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 199.78 E-value: 4.06e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 48 PVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEEI-ERSQPpvdlWRKFIYCTS 126
Cdd:COG0654 5 DVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRL-GLWDRLlARGAP----IRGIRVRDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 127 LSGSTLGTVdhmqpqDFEKVVSPASVaHFSQYKLTNLLLKRLEDLGFHVRgskesdgleadsvvarqilMGHECVGIDAN 206
Cdd:COG0654 80 SDGRVLARF------DAAETGLPAGL-VVPRADLERALLEAARALGVELR-------------------FGTEVTGLEQD 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 207 KDSITATvsfLKGGKHmkrnIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKLVSVHfmsrelgeylisnrpgmlffifn 286
Cdd:COG0654 134 ADGVTVT---LADGRT----LRADLVVGADGARSAVRRLLGIGFTGRDYPQRALWAG----------------------- 183
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 287 tdgigvlVAHDLLqgefvlqipyyppqQSLSDFSPEMCKMlifnlvghelsdLDVADIKPWVMHAEVAEKFmcCENRVIL 366
Cdd:COG0654 184 -------VRTELR--------------ARLAAAGPRLGEL------------LELSPRSAFPLRRRRAERW--RRGRVVL 228
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 367 AGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIALSNTSLSVQNFRAAMS 436
Cdd:COG0654 229 LGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDDEAALARYERERRPRAARVQRAADALGRLFHP 298
|
|
| PRK06184 |
PRK06184 |
hypothetical protein; Provisional |
49-434 |
4.36e-43 |
|
hypothetical protein; Provisional
Pssm-ID: 235728 [Multi-domain] Cd Length: 502 Bit Score: 162.85 E-value: 4.36e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDKAT-----SFSKHPQAhfinnRSMEIFRELdGLAEEI---ERSQPPVDLWRk 120
Cdd:PRK06184 6 VLIVGAGPTGLTLAIELARRGVSFRLIEKAPepfpgSRGKGIQP-----RTQEVFDDL-GVLDRVvaaGGLYPPMRIYR- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 121 fiyctslSGSTLGTVDHMQPQDfekvVSPASVAHFS----QYKLTNLLLKRLEDLGFHVRgskesdgleadsvvarqilM 196
Cdd:PRK06184 79 -------DDGSVAESDMFAHLE----PTPDEPYPLPlmvpQWRTERILRERLAELGHRVE-------------------F 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 197 GHECVGIDANKDSITATVSFLKGGkhmkRNIQCSLLVGADGAGSAVRKLTVIEMRGE-----RDLQKLVSVHFMSRElgE 271
Cdd:PRK06184 129 GCELVGFEQDADGVTARVAGPAGE----ETVRARYLVGADGGRSFVRKALGIGFPGEtlgidRMLVADVSLTGLDRD--A 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 272 YLISNRPGMLFFifntdGIGVLVAHDLLQgefvLQIPYypPQQSLSDFSPEMCKMLIFNLVGheLSDLDVADIkPWV--- 348
Cdd:PRK06184 203 WHQWPDGDMGMI-----ALCPLPGTDLFQ----IQAPL--PPGGEPDLSADGLTALLAERTG--RTDIRLHSV-TWAsaf 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 349 -MHAEVAEKFMccENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGsANSSILKTYETERRPIALSNTSLS 427
Cdd:PRK06184 269 rMNARLADRYR--VGRVFLAGDAAHVHPPAGGQGLNTSVQDAYNLGWKLAAVLAG-APEALLDTYEEERRPVAAAVLGLS 345
|
....*..
gi 79351534 428 VQNFRAA 434
Cdd:PRK06184 346 TELLDAI 352
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
48-429 |
6.20e-39 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 150.83 E-value: 6.20e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 48 PVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEEIER-SQPPVDLwRkfiYCTS 126
Cdd:PRK06183 12 DVVIVGAGPVGLTLANLLGQYGVRVLVLERWPTLYDLPRAVGIDDEALRVLQAI-GLADEVLPhTTPNHGM-R---FLDA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 127 lSGSTLGTVDH--MQPQDFekvvsPASVAhFSQYKLTNLLLKRLEDLGfHVRgskesdgleadsvvarqILMGHECVGID 204
Cdd:PRK06183 87 -KGRCLAEIARpsTGEFGW-----PRRNA-FHQPLLEAVLRAGLARFP-HVR-----------------VRFGHEVTALT 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 205 ANKDSITATVSFLKGGKhmkRNIQCSLLVGADGAGSAVRKLTVIEMRGErdlqklvsvHFMSRelgeYLIsnrpgmlffi 284
Cdd:PRK06183 142 QDDDGVTVTLTDADGQR---ETVRARYVVGCDGANSFVRRTLGVPFEDL---------TFPER----WLV---------- 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 285 fntdgIGVLVAHDLLQGEFVLQipYYPPQQslsdfsPEMCkMLI--------FNLVGHElSDLDVAD-------IKPWVM 349
Cdd:PRK06183 196 -----VDVLIANDPLGGPHTYQ--YCDPAR------PYTS-VRLphgrrrweFMLLPGE-TEEQLASpenvwrlLAPWGP 260
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 350 ---------------HAEVAEKFMCceNRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYET 414
Cdd:PRK06183 261 tpddaelirhavytfHARVADRWRS--GRVLLAGDAAHLMPPFAGQGMNSGIRDAANLAWKLAAVLRGRAGDALLDTYEQ 338
|
410
....*....|....*
gi 79351534 415 ERRPIALSNTSLSVQ 429
Cdd:PRK06183 339 ERRPHARAMIDLAVR 353
|
|
| PRK08244 |
PRK08244 |
monooxygenase; |
46-424 |
7.15e-33 |
|
monooxygenase;
Pssm-ID: 236199 [Multi-domain] Cd Length: 493 Bit Score: 132.95 E-value: 7.15e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 46 KLPVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFrELDGLAEE-IERSQPpvdlwrkfiyc 124
Cdd:PRK08244 2 KYEVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPRTLEIL-DMRGLLERfLEKGRK----------- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 125 tsLSGSTLGTVDhmQPQDFEKVVSPASVAHF-SQYKLTNLLLKRLEDLGFhvrgskesdgleadsvvarQILMGHECVGI 203
Cdd:PRK08244 70 --LPSGHFAGLD--TRLDFSALDTSSNYTLFlPQAETEKVLEEHARSLGV-------------------EIFRGAEVLAV 126
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 204 DANKDSITATVSflkgGKHMKRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLqklvsvhfMSRELGEYLISNRPGMLFF 283
Cdd:PRK08244 127 RQDGDGVEVVVR----GPDGLRTLTSSYVVGADGAGSIVRKQAGIAFPGTDAT--------FTAMLGDVVLKDPPPSSVL 194
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 284 IFNTDGIGVLVAhDLLQGEF-VLQIPYYPPQQSLSD-FSPEMCKMLIFNLVGhelSDLDVADIKpWVMH----AEVAEKF 357
Cdd:PRK08244 195 SLCTREGGVMIV-PLSGGIYrVLIIDPERPQVPKDEpVTLEELKTSLIRICG---TDFGLNDPV-WMSRfgnaTRQAERY 269
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 358 MccENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIA---LSNT 424
Cdd:PRK08244 270 R--SGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGWAPDWLLDSYHAERHPVGtalLRNT 337
|
|
| PRK08132 |
PRK08132 |
FAD-dependent oxidoreductase; Provisional |
41-416 |
2.33e-27 |
|
FAD-dependent oxidoreductase; Provisional
Pssm-ID: 236158 [Multi-domain] Cd Length: 547 Bit Score: 116.89 E-value: 2.33e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 41 GEDAAKLPVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEEIersqppVD---L 117
Cdd:PRK08132 18 ADDPARHPVVVVGAGPVGLALAIDLAQQGVPVVLLDDDDTLSTGSRAICFAKRSLEIFDRL-GCGERM------VDkgvS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 118 WRkfiyctslsgstLGTVDH---------MQPQDFEKVvsPASVaHFSQYKLTNLLLKRLEDL-GFHVRGSkesdglead 187
Cdd:PRK08132 91 WN------------VGKVFLrdeevyrfdLLPEPGHRR--PAFI-NLQQYYVEGYLVERAQALpNIDLRWK--------- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 188 svvarqilmgHECVGIDANKDSITATVSFLKGGKHMkrniQCSLLVGADGAGSAVRKLTVIEMRGErdlqklvsvHFMSR 267
Cdd:PRK08132 147 ----------NKVTGLEQHDDGVTLTVETPDGPYTL----EADWVIACDGARSPLREMLGLEFEGR---------TFEDR 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 268 elgeYLI------SNRPGMLFFIFntD-----GIGVLVAHdllQGEFVLQIPYyppqQSLSDFSPEMCKM------LIFN 330
Cdd:PRK08132 204 ----FLIadvkmkADFPTERWFWF--DppfhpGQSVLLHR---QPDNVWRIDF----QLGWDADPEAEKKpenvipRVRA 270
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 331 LVGHElsdldvADIKP-WV----MHAEVAEKFMccENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSAN 405
Cdd:PRK08132 271 LLGED------VPFELeWVsvytFQCRRMDRFR--HGRVLFAGDAAHQVSPFGARGANSGIQDADNLAWKLALVLRGRAP 342
|
410
....*....|.
gi 79351534 406 SSILKTYETER 416
Cdd:PRK08132 343 DSLLDSYASER 353
|
|
| PRK06834 |
PRK06834 |
hypothetical protein; Provisional |
363-424 |
9.07e-19 |
|
hypothetical protein; Provisional
Pssm-ID: 235870 [Multi-domain] Cd Length: 488 Bit Score: 90.08 E-value: 9.07e-19
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 79351534 363 RVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIA---LSNT 424
Cdd:PRK06834 266 RVLLAGDAAHVHSPVGGQGLNTGVQDAVNLGWKLAQVVKGTSPESLLDTYHAERHPVAarvLRNT 330
|
|
| PRK07190 |
PRK07190 |
FAD-binding protein; |
49-422 |
5.25e-18 |
|
FAD-binding protein;
Pssm-ID: 235955 [Multi-domain] Cd Length: 487 Bit Score: 87.56 E-value: 5.25e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFrELDGLAEEIERSQPPVD---LWR--KFIY 123
Cdd:PRK07190 8 VVIIGAGPVGLMCAYLGQLCGLNTVIVDKSDGPLEVGRADALNARTLQLL-ELVDLFDELYPLGKPCNtssVWAngKFIS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 124 CTSLSGSTLGTVDHmqpqdfekvvspasvAHF---SQYKLTNLLLKRLEDLGFHVRGSKesdgleadSVVarqilmghec 200
Cdd:PRK07190 87 RQSSWWEELEGCLH---------------KHFlmlGQSYVEKLLDDKLKEAGAAVKRNT--------SVV---------- 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 201 vGIDANKDSITATVSflkGGKhmkrNIQCSLLVGADGAGSAVRK--------------LTVIEMRGERDLQKLVSVHFMS 266
Cdd:PRK07190 134 -NIELNQAGCLTTLS---NGE----RIQSRYVIGADGSRSFVRNhfnvpfeiirpqiiWAVIDGVIDTDFPKVPEIIVFQ 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 267 RELGEYLISNRPGML--FFIfntdgigVLVAHDLLQGEFVLQIpyyppQQSLSDFSPEMCKMLIFnlvghelSDLDVADi 344
Cdd:PRK07190 206 AETSDVAWIPREGEIdrFYV-------RMDTKDFTLEQAIAKI-----NHAMQPHRLGFKEIVWF-------SQFSVKE- 265
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 79351534 345 kpwvmhaEVAEKFmCCENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIALS 422
Cdd:PRK07190 266 -------SVAEHF-FIQDRIFLAGDACHIHSVNGGQGLNTGLADAFNLIWKLNMVIHHGASPELLQSYEAERKPVAQG 335
|
|
| PRK08294 |
PRK08294 |
phenol 2-monooxygenase; Provisional |
44-420 |
8.45e-17 |
|
phenol 2-monooxygenase; Provisional
Pssm-ID: 236223 [Multi-domain] Cd Length: 634 Bit Score: 84.27 E-value: 8.45e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 44 AAKLP----VLIVGAGPVGLVLSILLTKL-GVKCAVVDKatsfSKHP----QAHFINNRSMEIFRELdGLAEEIERSQPP 114
Cdd:PRK08294 26 PADLPdevdVLIVGCGPAGLTLAAQLSAFpDITTRIVER----KPGRlelgQADGIACRTMEMFQAF-GFAERILKEAYW 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 115 VD---LWRKfiyctslsgstlgtvdhmQPQDFEKVVSPASV----AHFSQYKltNLLLKRLEDLGFHVRGSKESDG-LEA 186
Cdd:PRK08294 101 INetaFWKP------------------DPADPSTIVRTGRVqdteDGLSEFP--HVIVNQARVHDYFLDVMRNSPTrLEP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 187 DsvvarqilMGHECVGIDANKDS---ITATVSFLKGGKHMK-RNIQCSLLVGADGAGSAVRKLTVIEMRGER-------- 254
Cdd:PRK08294 161 D--------YGREFVDLEVDEEGeypVTVTLRRTDGEHEGEeETVRAKYVVGCDGARSRVRKAIGRELRGDSanhawgvm 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 255 ---------DLQKLVSVHfmSRELGEYLISNRPGMLFFIFNTDgIGVL-----VAHDLLQGEFVLQipyyPPQQSLSDFS 320
Cdd:PRK08294 233 dvlavtdfpDIRLKCAIQ--SASEGSILLIPREGGYLVRLYVD-LGEVppderVAVRNTTVEEVIA----KAQRILHPYT 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 321 PEMcKMLIFNLV---GHELSDL--DVADikpwvmhAEVAEKFmcceNRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWK 395
Cdd:PRK08294 306 LDV-KEVAWWSVyevGQRLTDRfdDVPA-------EEAGTRL----PRVFIAGDACHTHSAKAGQGMNVSMQDGFNLGWK 373
|
410 420
....*....|....*....|....*
gi 79351534 396 IAALVQGSANSSILKTYETERRPIA 420
Cdd:PRK08294 374 LAAVLSGRSPPELLHTYSAERQAIA 398
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
49-418 |
2.70e-14 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 75.32 E-value: 2.70e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDkATSFSKHPQAHF------INNRSMEIFRELDglaeeiersqppvdLWRKfi 122
Cdd:TIGR01988 2 IVIVGGGMVGLALALALARSGLKVALIE-ATPLPAPADPGFdnrvsaLSAASIRLLEKLG--------------VWDK-- 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 123 yctslsgstlgtVDHMQPQDFEKV-----VSPASVaHFSQYKLTnlllkrLEDLGFHVRGSKESDGLEadSVVARQ---- 193
Cdd:TIGR01988 65 ------------IEPARAQPIRDIhvsdgGSFGAL-RFDADEIG------LEALGYVVENRVLQQALW--ERLQELpnvt 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 194 ILMGHECVGIDANKDSITATvsfLKGGkhmkRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKlvsvhfmsrelgeyl 273
Cdd:TIGR01988 124 LLCPARVVELPRHSDHVELT---LDDG----QQLRARLLVGADGANSKVRQLAGIPTTGWDYGQS--------------- 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 274 isnrpgMLFFIFNTDgigvlVAHD-------LLQGEFVLqIPYYPPQQSL--SDfSPEMCKMLIfNL------------V 332
Cdd:TIGR01988 182 ------AVVANVKHE-----RPHQgtawerfTPTGPLAL-LPLPDNRSSLvwTL-PPEEAERLL-ALsdeeflaelqraF 247
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 333 GHELSDL-DVADIKPWVMHAEVAEKFmcCENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQ-----GSANS 406
Cdd:TIGR01988 248 GSRLGAItLVGERHAFPLSLTHAKRY--VAPRLALIGDAAHTIHPLAGQGLNLGLRDVAALAEVLEDARRrgediGSLRV 325
|
410
....*....|..
gi 79351534 407 siLKTYETERRP 418
Cdd:TIGR01988 326 --LQRYERRRRF 335
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
49-457 |
3.44e-13 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 71.81 E-value: 3.44e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDKATSF-------SKHPqahfinnRSMEIFRELdGLAEEIErsQPPVDLWRKF 121
Cdd:PRK06185 9 CCIVGGGPAGMMLGLLLARAGVDVTVLEKHADFlrdfrgdTVHP-------STLELMDEL-GLLERFL--ELPHQKVRTL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 122 IYCTSLSGSTLGTVDHM-QPQDFekvvspasVAHFSQYKLTNLLLKRLEDL-GFHVRgskesdgleadsvvarqilMGHE 199
Cdd:PRK06185 79 RFEIGGRTVTLADFSRLpTPYPY--------IAMMPQWDFLDFLAEEASAYpNFTLR-------------------MGAE 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 200 CVGIDANKDSITATVSFLKGGKHmkrNIQCSLLVGADGAGSAVRK---LTVIEMRGERDLqklvsVHF-MSRELGE---Y 272
Cdd:PRK06185 132 VTGLIEEGGRVTGVRARTPDGPG---EIRADLVVGADGRHSRVRAlagLEVREFGAPMDV-----LWFrLPREPDDpesL 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 273 LISNRPGMLFFIFNTDGigvlvahdllqgefVLQIPYYPP---------------QQSLSDFSPEMCKMLifnlvgHELS 337
Cdd:PRK06185 204 MGRFGPGQGLIMIDRGD--------------YWQCGYVIPkggyaalraagleafRERVAELAPELADRV------AELK 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 338 DLDvaDIKpwVMHAEVaekfmcceNRV--------ILAGDAAHRFPPAGGFGMNTGIQDA---HNLAwkIAALVQGSANS 406
Cdd:PRK06185 264 SWD--DVK--LLDVRV--------DRLrrwhrpglLCIGDAAHAMSPVGGVGINLAIQDAvaaANIL--AEPLRRGRVSD 329
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 79351534 407 SILKTYETERR-PIALsntslsVQNFRAAMS----VPSALGLDPTVANSVHRFINK 457
Cdd:PRK06185 330 RDLAAVQRRREfPTRV------TQALQRRIQrrllAPALAGRGPLGPPLLLRLLNR 379
|
|
| COQ6 |
TIGR01989 |
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ... |
49-418 |
5.02e-12 |
|
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Pssm-ID: 273914 [Multi-domain] Cd Length: 437 Bit Score: 68.63 E-value: 5.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGV----KCAVVD------KATSFSKHPQAHF------INNRSMEIFRELDGLAE-EIERS 111
Cdd:TIGR01989 3 VVIVGGGPVGLALAAALGNNPLtkdlKVLLLDavdnpkLKSRNYEKPDGPYsnrvssITPASISFFKKIGAWDHiQSDRI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 112 QPpvdlWRKFIYCTSLSGSTLgtvdhmqpqDFEKVVSPASVAHFSQYK-LTNLLLKRLEdlgfhvrgskESDGlEADSVV 190
Cdd:TIGR01989 83 QP----FGRMQVWDGCSLALI---------RFDRDNGKEDMACIIENDnIQNSLYNRLQ----------EYNG-DNVKIL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 191 ARQILMGHECVGIDANKDSITATVSFLKGgkhmkRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKLV--SVHFmsre 268
Cdd:TIGR01989 139 NPARLISVTIPSKYPNDNSNWVHITLSDG-----QVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVvaTLKL---- 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 269 lgEYLISNRPGMLFFIFN--------TDGIGVLVAH------------------DLLQGEFVL---QIPYYPpqqsLSDF 319
Cdd:TIGR01989 210 --EEATENDVAWQRFLPTgpiallplPDNNSTLVWStspeealrllslppedfvDALNAAFDLgysDHPYSY----LLDY 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 320 SPEMckmlIFNLVGHELSDLDVADIKPWVMHAEVAEKFMC-----------CENRVILAGDAAHRFPPAGGFGMNTGIQD 388
Cdd:TIGR01989 284 AMEK----LNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAAfplglghadeyVTKRVALVGDAAHRVHPLAGQGVNLGFGD 359
|
410 420 430
....*....|....*....|....*....|...
gi 79351534 389 AHNLAWKIAALVQGSAN---SSILKTYETERRP 418
Cdd:TIGR01989 360 VASLVKALAEAVSVGADigsISSLKPYERERYA 392
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
49-418 |
3.16e-10 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 62.73 E-value: 3.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDkATSFSK---HPQAHFINNRSMEIFRELdGLAEEIersQPPVDLWRKFIyct 125
Cdd:PRK07364 21 VAIVGGGIVGLTLAAALKDSGLRIALIE-AQPAEAaaaKGQAYALSLLSARIFEGI-GVWEKI---LPQIGKFRQIR--- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 126 sLSGSTLGTVDHMQPQDfekvVSPASVAHFSQYK-LTNLLLKRLEDLGfHVrgskesdgleadsvvarQILMGHECVGID 204
Cdd:PRK07364 93 -LSDADYPGVVKFQPTD----LGTEALGYVGEHQvLLEALQEFLQSCP-NI-----------------TWLCPAEVVSVE 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 205 ANKDsiTATVSFLKGGKhmKRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKLVsVHFMSRELgeylisNRPGMLFFI 284
Cdd:PRK07364 150 YQQD--AATVTLEIEGK--QQTLQSKLVVAADGARSPIRQAAGIKTKGWKYWQSCV-TATVKHEA------PHNDIAYER 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 285 FNTDG-IGVL-------------------VAHDLLQGEFVLQI-PYYPPQqslsdfspemckMLIFNLVGHelsdldvad 343
Cdd:PRK07364 219 FWPSGpFAILplpgnrcqivwtaphaqakALLALPEAEFLAELqQRYGDQ------------LGKLELLGD--------- 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 344 ikPWVMHAEVAEKFMCCENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQ-----GSAnsSILKTYETERRP 418
Cdd:PRK07364 278 --RFLFPVQLMQSDRYVQHRLALVGDAAHCCHPVGGQGLNLGIRDAAALAQVLQTAHQrgediGSL--AVLKRYERWRKR 353
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
49-436 |
1.99e-09 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 60.30 E-value: 1.99e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDkatsfskhPQAHFINNRS----MEIFRELDGLaeeiersqppvDLWRKFiyc 124
Cdd:PRK07494 10 IAVIGGGPAGLAAAIALARAGASVALVA--------PEPPYADLRTtallGPSIRFLERL-----------GLWARL--- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 125 tSLSGSTLGTvdhMQPQDFEKVVSPASVAHFSQ---------YKLTNLLLKR-LEDlgfHVRGSKESD--GLEADSVVAR 192
Cdd:PRK07494 68 -APHAAPLQS---MRIVDATGRLIRAPEVRFRAaeigedafgYNIPNWLLNRaLEA---RVAELPNITrfGDEAESVRPR 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 193 QilmghecvgidankDSITATvsfLKGGkhmkRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKLVSVHFmSRELGEY 272
Cdd:PRK07494 141 E--------------DEVTVT---LADG----TTLSARLVVGADGRNSPVREAAGIGVRTWSYPQKALVLNF-THSRPHQ 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 273 LISNRpgmlffiFNTDGigvlvahdllqGEFVlQIPY-----------YPPQ-QSLSDFSPE---------MCKMLifnl 331
Cdd:PRK07494 199 NVSTE-------FHTEG-----------GPFT-QVPLpgrrsslvwvvRPAEaERLLALSDAalsaaieerMQSML---- 255
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 332 vGHelsdLDVAD-IKPWVMHAEVAEKFmcCENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAwKIAALVQGSANSS-IL 409
Cdd:PRK07494 256 -GK----LTLEPgRQAWPLSGQVAHRF--AAGRTALVGEAAHVFPPIGAQGLNLGLRDVATLV-EIVEDRPEDPGSAaVL 327
|
410 420
....*....|....*....|....*...
gi 79351534 410 KTYETERRPIALSNT-SLSVQNfRAAMS 436
Cdd:PRK07494 328 AAYDRARRPDILSRTaSVDLLN-RSLLS 354
|
|
| PRK07333 |
PRK07333 |
ubiquinone biosynthesis hydroxylase; |
49-426 |
5.87e-08 |
|
ubiquinone biosynthesis hydroxylase;
Pssm-ID: 180935 [Multi-domain] Cd Length: 403 Bit Score: 55.37 E-value: 5.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLG--VKCAVVDKATS--FSKHPQAHFINNRSMEIFRELdGLAEEIE-RSQPPVDLwrkFIY 123
Cdd:PRK07333 4 VVIAGGGYVGLALAVALKQAAphLPVTVVDAAPAgaWSRDPRASAIAAAARRMLEAL-GVWDEIApEAQPITDM---VIT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 124 CTSLSgstlgtvDHMQPQ--DFEKVVSPAS-VAHFSQYK-LTNLLLKRLEDLGFHVRgskesdglEADSVVarqilmghe 199
Cdd:PRK07333 80 DSRTS-------DPVRPVflTFEGEVEPGEpFAHMVENRvLINALRKRAEALGIDLR--------EATSVT--------- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 200 cvGIDANKDSITATvsfLKGGKhmkrNIQCSLLVGADGAGSAVRKLTVIEMRG--------------ERDLQKLVSVHFM 265
Cdd:PRK07333 136 --DFETRDEGVTVT---LSDGS----VLEARLLVAADGARSKLRELAGIKTVGwdygqsgivctvehERPHGGRAEEHFL 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 266 SRelGEY----LISNRPGMLFFIFNTDGIGVLVAHDLLqgefvlqipyyppqqslsdFSPEMCKMLifnlvGHELSDLDV 341
Cdd:PRK07333 207 PA--GPFailpLKGNRSSLVWTERTADAERLVALDDLV-------------------FEAELEQRF-----GHRLGELKV 260
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 342 ADiKP--WVMHAEVAEKFMccENRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKI--AA---LVQGSANssILKTYET 414
Cdd:PRK07333 261 LG-KRraFPLGLTLARSFV--APRFALVGDAAHGIHPIAGQGLNLGLKDVAALAEVVveAArlgLDIGSLD--VLERYQR 335
|
410
....*....|....*.
gi 79351534 415 ERRP----IALSNTSL 426
Cdd:PRK07333 336 WRRFdtvrMGVTTDVL 351
|
|
| PRK07538 |
PRK07538 |
hypothetical protein; Provisional |
47-423 |
6.40e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 236046 [Multi-domain] Cd Length: 413 Bit Score: 55.29 E-value: 6.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 47 LPVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFskHP-------QAHFInnrsmeifRELD--GLAEEIERSQPPVDL 117
Cdd:PRK07538 1 MKVLIAGGGIGGLTLALTLHQRGIEVVVFEAAPEL--RPlgvginlLPHAV--------RELAelGLLDALDAIGIRTRE 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 118 WRKFiyctSLSGSTLGTvdhmqpqdfekvvSPASVA---HFSQY-----KLTNLLLKR-LEDLGfhvrgskesdgleADS 188
Cdd:PRK07538 71 LAYF----NRHGQRIWS-------------EPRGLAagyDWPQYsihrgELQMLLLDAvRERLG-------------PDA 120
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 189 VVArqilmGHECVGIDANKDSITATVSFLKGGKhmKRNIQCSLLVGADGAGSAVRKLT-----------------VIEMR 251
Cdd:PRK07538 121 VRT-----GHRVVGFEQDADVTVVFLGDRAGGD--LVSVRGDVLIGADGIHSAVRAQLypdegpprwngvmmwrgVTEAP 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 252 GERDLQKLVSVHFMSRELGEYLISNRPGmlffifnTDGIgVLVahdllqgEFVLQIPY---YPPQQS-------LSDFSP 321
Cdd:PRK07538 194 PFLTGRSMVMAGHLDGKLVVYPISEPVD-------ADGR-QLI-------NWVAEVRVddaGAPRREdwnrpgdLEDFLP 258
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 322 emckmlIFNlvGHELSDLDVADIkpwVMHAEVAEKFMCC---------ENRVILAGDAAHRFPPAGGFGMNTGIQDAHNL 392
Cdd:PRK07538 259 ------HFA--DWRFDWLDVPAL---IRAAEAIYEYPMVdrdplprwtRGRVTLLGDAAHPMYPVGSNGASQAILDARAL 327
|
410 420 430
....*....|....*....|....*....|....*
gi 79351534 393 AwkiAALVQGSANSSILKTYETERRP----IALSN 423
Cdd:PRK07538 328 A---DALAAHGDPEAALAAYEAERRPataqIVLAN 359
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
54-417 |
1.92e-07 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 53.05 E-value: 1.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 54 AGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEEIERSQPPVDLWrkfiyctSLSGSTLg 133
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPL-GLDEPLERPVRGARFY-------SPGGKSV- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 134 TVDHMQPQDFekvvspasvaHFSQYKLTNLLLKRLEDLGfhvrgskesdgleADsvvarqILMGHECVGIDANKDSITAT 213
Cdd:COG0644 72 ELPPGRGGGY----------VVDRARFDRWLAEQAEEAG-------------AE------VRTGTRVTDVLRDDGRVVVR 122
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 214 VsflkggKHMKRnIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKLVSVHFMsRELGEYLISNRPGMLFFIFNTDGIG-- 291
Cdd:COG0644 123 T------GDGEE-IRADYVVDADGARSLLARKLGLKRRSDEPQDYALAIKEH-WELPPLEGVDPGAVEFFFGEGAPGGyg 194
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 292 -VLVAHDllqGEFVLQIPYYPPQQSLSDfspemckmlifnlvghelsdldvadikpwvmhaevaekfmcceNRVILAGDA 370
Cdd:COG0644 195 wVFPLGD---GRVSVGIPLGGPRPRLVG-------------------------------------------DGVLLVGDA 228
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 79351534 371 AHRFPPAGGFGMNTGIQDAHNLAWKIA-ALVQGSANSSILKTYETERR 417
Cdd:COG0644 229 AGFVDPLTGEGIHLAMKSGRLAAEAIAeALEGGDFSAEALAEYERRLR 276
|
|
| PRK08243 |
PRK08243 |
4-hydroxybenzoate 3-monooxygenase; Validated |
49-401 |
2.96e-06 |
|
4-hydroxybenzoate 3-monooxygenase; Validated
Pssm-ID: 236198 [Multi-domain] Cd Length: 392 Bit Score: 50.18 E-value: 2.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDKATSfsKH----PQAHFINNRSMEIFRELdGLAEEIERSQPPVDlwrkfiyc 124
Cdd:PRK08243 5 VAIIGAGPAGLLLGQLLHLAGIDSVVLERRSR--EYvegrIRAGVLEQGTVDLLREA-GVGERMDREGLVHD-------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 125 tslsGSTLGTVDHMQPQDFEKVVSPASVAHFSQYKLTNLLLKRLEDLGFHVRgskesdgLEADSVVARQIlmghecvgid 204
Cdd:PRK08243 74 ----GIELRFDGRRHRIDLTELTGGRAVTVYGQTEVTRDLMAARLAAGGPIR-------FEASDVALHDF---------- 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 205 ankDSITATVSFLKGGKHmkRNIQCSLLVGADGAGSAVRKLtvIEMRGERDLQKlvsvhfmsrelgEYlisnrP-GMLff 283
Cdd:PRK08243 133 ---DSDRPYVTYEKDGEE--HRLDCDFIAGCDGFHGVSRAS--IPAGALRTFER------------VY-----PfGWL-- 186
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 284 ifntdgiGVL-----VAHDLLQGE----FVLQIP-------YY---PPQQSLSDFSPEmckmLIFNlvghELS---DLDV 341
Cdd:PRK08243 187 -------GILaeappVSDELIYANhergFALCSMrsptrsrYYlqcPLDDKVEDWSDE----RFWD----ELRrrlPPED 251
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 79351534 342 AD-----------IKPwvMHAEVAE--KFmcceNRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWkiaALVQ 401
Cdd:PRK08243 252 AErlvtgpsieksIAP--LRSFVAEpmQY----GRLFLAGDAAHIVPPTGAKGLNLAASDVRYLAR---ALVE 315
|
|
| PRK08849 |
PRK08849 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
225-418 |
5.57e-06 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 181564 [Multi-domain] Cd Length: 384 Bit Score: 49.38 E-value: 5.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 225 RNIQCSLLVGADGAGSAVRKLTVIEMRG--ERDLQKLVSVhfmSRELGEYLISnrpgmlFFIFNTDGIGVLVAHDLLQGE 302
Cdd:PRK08849 152 AEIEAKWVIGADGANSQVRQLAGIGITAwdYRQHCMLINV---ETEQPQQDIT------WQQFTPSGPRSFLPLCGNQGS 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 303 FVLqipYYPPQ--QSLSDFSPEMCKMLIFNLVGHELSDLDVADIKPWVMHAEVAEKFMccENRVILAGDAAHRFPPAGGF 380
Cdd:PRK08849 223 LVW---YDSPKriKQLSAMNPEQLRSEILRHFPAELGEIKVLQHGSFPLTRRHAQQYV--KNNCVLLGDAAHTINPLAGQ 297
|
170 180 190
....*....|....*....|....*....|....*...
gi 79351534 381 GMNTGIQDAHNLAWKIAAlvQGSANSSILKTYETERRP 418
Cdd:PRK08849 298 GVNLGFKDVDVLLAETEK--QGVLNDASFARYERRRRP 333
|
|
| PRK07608 |
PRK07608 |
UbiH/UbiF family hydroxylase; |
195-417 |
6.31e-06 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181057 [Multi-domain] Cd Length: 388 Bit Score: 49.18 E-value: 6.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 195 LMGHECVGIDANKDSITATvsfLKGGkhmkRNIQCSLLVGADGAGSAVRKLTVIEMRGERDLQKLVSVHFMSrelgeyli 274
Cdd:PRK07608 129 WFPARAQGLEVDPDAATLT---LADG----QVLRADLVVGADGAHSWVRSQAGIKAERRPYRQTGVVANFKA-------- 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 275 sNRP--GMLFFIFNTDGIGVLV-----------------AHDLLQgefvlqipyyppqqslsdFSPEMCKMLIFNLVGHE 335
Cdd:PRK07608 194 -ERPhrGTAYQWFRDDGILALLplpdghvsmvwsartahADELLA------------------LSPEALAARVERASGGR 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 336 LSDLDVadIKPW------VMHAE--VAEkfmccenRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAAL--VQGSAN 405
Cdd:PRK07608 255 LGRLEC--VTPAagfplrLQRVDrlVAP-------RVALVGDAAHLIHPLAGQGMNLGLRDVAALADVLAGRepFRDLGD 325
|
250
....*....|..
gi 79351534 406 SSILKTYETERR 417
Cdd:PRK07608 326 LRLLRRYERARR 337
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
44-393 |
1.13e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 44.86 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 44 AAKLPVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKHPQAHFINNRSMEIFRELdGLAEE-IERSQPpvdlWRKFI 122
Cdd:PRK06847 2 AAVKKVLIVGGGIGGLSAAIALRRAGIAVDLVEIDPEWRVYGAGITLQGNALRALREL-GVLDEcLEAGFG----FDGVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 123 YCTSlSGSTLGTVdhmqpqDFEKVVS---PASVAhFSQYKLTNLLLKRLEDLGFHVRGSKESDGLE--ADSVvarqilmg 197
Cdd:PRK06847 77 LFDP-DGTLLAEL------PTPRLAGddlPGGGG-IMRPALARILADAARAAGADVRLGTTVTAIEqdDDGV-------- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 198 hecvgidankdsitaTVSFLKGGKHmkrniQCSLLVGADGAGSAVRKLtvieMRGERdlqklvsvhFMSRELGE----YL 273
Cdd:PRK06847 141 ---------------TVTFSDGTTG-----RYDLVVGADGLYSKVRSL----VFPDE---------PEPEYTGQgvwrAV 187
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 274 ISNRPGM---LFFIFNTDGIGVL-VAHDLLQgEFVLQ----IPYYPP-------QQSLSDFSPEMCKMLIFNLVGHELSD 338
Cdd:PRK06847 188 LPRPAEVdrsLMYLGPTTKAGVVpLSEDLMY-LFVTEprpdNPRIEPdtlaallRELLAPFGGPVLQELREQITDDAQVV 266
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 79351534 339 ---LDVADIK-PWvmHaevaekfmccENRVILAGDAAHRFPP--AGGFGMntGIQDAHNLA 393
Cdd:PRK06847 267 yrpLETLLVPaPW--H----------RGRVVLIGDAAHATTPhlAQGAGM--AIEDAIVLA 313
|
|
| PRK08850 |
PRK08850 |
2-octaprenyl-6-methoxyphenol hydroxylase; Validated |
363-432 |
4.05e-04 |
|
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Pssm-ID: 236341 [Multi-domain] Cd Length: 405 Bit Score: 43.22 E-value: 4.05e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 79351534 363 RVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQgsANSSI-----LKTYETERRPIALSNTSlSVQNFR 432
Cdd:PRK08850 283 RVALVGDAAHTIHPLAGQGVNLGLLDAASLAQEILALWQ--QGRDIglkrnLRGYERWRKAEAAKMIA-AMQGFR 354
|
|
| PRK06617 |
PRK06617 |
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated |
225-417 |
5.71e-04 |
|
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Pssm-ID: 168629 [Multi-domain] Cd Length: 374 Bit Score: 42.99 E-value: 5.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 225 RNIQCSLLVGADGAGSAVRK-------------LTVIEMRGERDLQKLVSVHFMSreLGeylisnrPGMLFFIFNTDGIG 291
Cdd:PRK06617 145 KQIKCNLLIICDGANSKVRShyfaneiekpyqtALTFNIKHEKPHENCAMEHFLP--LG-------PFALLPLKDQYASS 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 292 VLVAHDLLQGEFVLQIPYyppqqslsdfspEMCKMLIFNLVGHELSDLDV-ADIKPWVMHAEVAEKFMccENRVILAGDA 370
Cdd:PRK06617 216 VIWSTSSDQAALIVNLPV------------EEVRFLTQRNAGNSLGKITIdSEISSFPLKARIANRYF--HNRIVLIADT 281
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 79351534 371 AHRFPPAGGFGMNTGIQDahnlawkIAALVQGSANSSILKTYETERR 417
Cdd:PRK06617 282 AHTVHPLAGQGLNQGIKD-------IEILSMIVSNNGTLQEYQKLRQ 321
|
|
| PRK07236 |
PRK07236 |
hypothetical protein; Provisional |
197-243 |
7.84e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235980 [Multi-domain] Cd Length: 386 Bit Score: 42.22 E-value: 7.84e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 79351534 197 GHECVGIDANKDsiTATVSFLKGgkhmkRNIQCSLLVGADGAGSAVR 243
Cdd:PRK07236 118 GETLVGFEQDGD--RVTARFADG-----RRETADLLVGADGGRSTVR 157
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
225-442 |
8.69e-04 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 42.20 E-value: 8.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 225 RNIQCSLLVGADGAGSAVRKlTVIEMRGERD------LQKLVSVHFMSRELGEYLISNRPGMLFFIfntdGIGVLVAhdl 298
Cdd:PRK07045 150 ERVAPTVLVGADGARSMIRD-DVLRMPAERVpyatpmAFGTIALTDSVRECNRLYVDSNQGLAYFY----PIGDQAT--- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 299 lqgEFVLQIPYYPPQQSLSDFSPEMCKMLIFNLVGHELSDLdVADIKPWVMHAEVAEKFMCCE----NRVILAGDAAHRF 374
Cdd:PRK07045 222 ---RLVVSFPADEMQGYLADTTRTKLLARLNEFVGDESADA-MAAIGAGTAFPLIPLGRMNLDryhkRNVVLLGDAAHSI 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 79351534 375 PPAGGFGMNTGIQDAHNLAWKIAALVQGS-ANSSILKTYETERRPI---------ALSNT----SLSVQNFRAAMSV--- 437
Cdd:PRK07045 298 HPITGQGMNLAIEDAGELGACLDLHLSGQiALADALERFERIRRPVneavisyghALATTyhdrAALVANFRSQLQTsgr 377
|
....*.
gi 79351534 438 -PSALG 442
Cdd:PRK07045 378 dAAWLG 383
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
51-78 |
2.22e-03 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 37.13 E-value: 2.22e-03
10 20
....*....|....*....|....*...
gi 79351534 51 IVGAGPVGLVLSILLTKLGVKCAVVDKA 78
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKR 28
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
49-84 |
5.23e-03 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 39.96 E-value: 5.23e-03
10 20 30
....*....|....*....|....*....|....*.
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDKATSFSKH 84
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGA 37
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
42-81 |
5.85e-03 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 39.85 E-value: 5.85e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 79351534 42 EDAAKLPVLIVGAGPVGLVLSILLTKLGVKCAVVDKATSF 81
Cdd:COG2072 2 AATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDV 41
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
49-79 |
9.54e-03 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 38.91 E-value: 9.54e-03
10 20 30
....*....|....*....|....*....|.
gi 79351534 49 VLIVGAGPVGLVLSILLTKLGVKCAVVDKAT 79
Cdd:COG1249 6 LVVIGAGPGGYVAAIRAAQLGLKVALVEKGR 36
|
|
| |
