nuclear pore complex protein [Arabidopsis thaliana]
Nucleoporin_FG and Nup54 domain-containing protein( domain architecture ID 10614400)
Nucleoporin_FG and Nup54 domain-containing protein
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Nup54 | pfam13874 | Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, ... |
162-305 | 7.71e-37 | |||
Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, equivalent to Nup57 of yeast. Nup54, Nup58 and Nup62 all have similar affinities for importin-beta. It seems likely that they are the only FG-repeat nucleoporins of the central channel, and as such they would form a zone of equal affinity spanning the central channel. The diffusion of importin-beta import complexes through the central channel may be a stochastic process as the affinities are similar, whereas movement from cytoplasmic fibrils to the central channel and from the central channel to the nuclear basket would be facilitated by the subtle differences in affinity between them. : Pssm-ID: 464011 [Multi-domain] Cd Length: 139 Bit Score: 130.39 E-value: 7.71e-37
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Nucleoporin_FG | pfam13634 | Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in ... |
1-42 | 4.75e-04 | |||
Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in nucleoporin proteins. This family includes the yeast nucleoporins Nup116, Nup100, Nup49, Nup57 and Nup 145. : Pssm-ID: 463941 [Multi-domain] Cd Length: 90 Bit Score: 38.75 E-value: 4.75e-04
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Name | Accession | Description | Interval | E-value | |||
Nup54 | pfam13874 | Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, ... |
162-305 | 7.71e-37 | |||
Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, equivalent to Nup57 of yeast. Nup54, Nup58 and Nup62 all have similar affinities for importin-beta. It seems likely that they are the only FG-repeat nucleoporins of the central channel, and as such they would form a zone of equal affinity spanning the central channel. The diffusion of importin-beta import complexes through the central channel may be a stochastic process as the affinities are similar, whereas movement from cytoplasmic fibrils to the central channel and from the central channel to the nuclear basket would be facilitated by the subtle differences in affinity between them. Pssm-ID: 464011 [Multi-domain] Cd Length: 139 Bit Score: 130.39 E-value: 7.71e-37
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Nucleoporin_FG | pfam13634 | Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in ... |
1-42 | 4.75e-04 | |||
Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in nucleoporin proteins. This family includes the yeast nucleoporins Nup116, Nup100, Nup49, Nup57 and Nup 145. Pssm-ID: 463941 [Multi-domain] Cd Length: 90 Bit Score: 38.75 E-value: 4.75e-04
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Name | Accession | Description | Interval | E-value | |||
Nup54 | pfam13874 | Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, ... |
162-305 | 7.71e-37 | |||
Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, equivalent to Nup57 of yeast. Nup54, Nup58 and Nup62 all have similar affinities for importin-beta. It seems likely that they are the only FG-repeat nucleoporins of the central channel, and as such they would form a zone of equal affinity spanning the central channel. The diffusion of importin-beta import complexes through the central channel may be a stochastic process as the affinities are similar, whereas movement from cytoplasmic fibrils to the central channel and from the central channel to the nuclear basket would be facilitated by the subtle differences in affinity between them. Pssm-ID: 464011 [Multi-domain] Cd Length: 139 Bit Score: 130.39 E-value: 7.71e-37
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Nucleoporin_FG | pfam13634 | Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in ... |
1-42 | 4.75e-04 | |||
Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in nucleoporin proteins. This family includes the yeast nucleoporins Nup116, Nup100, Nup49, Nup57 and Nup 145. Pssm-ID: 463941 [Multi-domain] Cd Length: 90 Bit Score: 38.75 E-value: 4.75e-04
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Blast search parameters | ||||
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