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Conserved domains on  [gi|15220661|ref|NP_173729|]
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Auxin-responsive GH3 family protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GH3 super family cl21606
GH3 auxin-responsive promoter;
15-577 0e+00

GH3 auxin-responsive promoter;


The actual alignment was detected with superfamily member PLN02247:

Pssm-ID: 473922  Cd Length: 606  Bit Score: 775.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   15 MKVLEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFLGSFDKESFKKNVPVVTYEDVKPYIERVVNGEPSNVISARPITG 94
Cdd:PLN02247  14 LKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLDGESDKQSFKNKVPVVNYEDIKPCIERIANGESSSIISAQPITE 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   95 FVLSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISNNVKDVEKGKAMMFYFTKLESITPSGLPARVASSSYLKSNYFK 174
Cdd:PLN02247  94 LLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSYYKSSNFR 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  175 NRPSNWYYSYTSPDEVTLCPDNKQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRSGQLSEWITD 254
Cdd:PLN02247 174 NRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGCVSDWITD 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  255 IGCRDSVSLVLGGPHPEAADTIEQICNQKCWKGIITRLWPKAKYIETIVTGSMVQYVPTLNYYSNNmLPLISTIYASSET 334
Cdd:PLN02247 254 PSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGG-LPLVSTMYASSEC 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  335 QFGLNLNPMCKPEDVSYTFMPNVSYFEFIPVDGD----------------------KNDVVDLADVKLGCCYEAVVTNFS 392
Cdd:PLN02247 333 YFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNngevihfvqcngtdddddalkeDLEIVDLVDVKVGHYYELVVTTFT 412
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  393 GLYRIRVGDILVVTGFHNKAPQFRFIRRDNVVLSIDLDKTNEDDLFKAVNNAKLTLDSSHLMLIDFTSYADISTIPGHYV 472
Cdd:PLN02247 413 GLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSSIPGHYV 492
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  473 VYWEVKNKNEDKKSkkhiELKEETFSECCLLMEDSLDSVYKICRFKEESVGPLEIKVVRQGTFDSLMDYFISQGASIGQY 552
Cdd:PLN02247 493 LFWELKTRGSNDPP----ELDPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQY 568
                        570       580
                 ....*....|....*....|....*
gi 15220661  553 KTPRCIKSGKALEVLEENVVATFFS 577
Cdd:PLN02247 569 KTPRCIKSEEALKILDSRVIGRFFS 593
 
Name Accession Description Interval E-value
PLN02247 PLN02247
indole-3-acetic acid-amido synthetase
15-577 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 165890  Cd Length: 606  Bit Score: 775.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   15 MKVLEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFLGSFDKESFKKNVPVVTYEDVKPYIERVVNGEPSNVISARPITG 94
Cdd:PLN02247  14 LKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLDGESDKQSFKNKVPVVNYEDIKPCIERIANGESSSIISAQPITE 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   95 FVLSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISNNVKDVEKGKAMMFYFTKLESITPSGLPARVASSSYLKSNYFK 174
Cdd:PLN02247  94 LLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSYYKSSNFR 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  175 NRPSNWYYSYTSPDEVTLCPDNKQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRSGQLSEWITD 254
Cdd:PLN02247 174 NRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGCVSDWITD 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  255 IGCRDSVSLVLGGPHPEAADTIEQICNQKCWKGIITRLWPKAKYIETIVTGSMVQYVPTLNYYSNNmLPLISTIYASSET 334
Cdd:PLN02247 254 PSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGG-LPLVSTMYASSEC 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  335 QFGLNLNPMCKPEDVSYTFMPNVSYFEFIPVDGD----------------------KNDVVDLADVKLGCCYEAVVTNFS 392
Cdd:PLN02247 333 YFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNngevihfvqcngtdddddalkeDLEIVDLVDVKVGHYYELVVTTFT 412
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  393 GLYRIRVGDILVVTGFHNKAPQFRFIRRDNVVLSIDLDKTNEDDLFKAVNNAKLTLDSSHLMLIDFTSYADISTIPGHYV 472
Cdd:PLN02247 413 GLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSSIPGHYV 492
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  473 VYWEVKNKNEDKKSkkhiELKEETFSECCLLMEDSLDSVYKICRFKEESVGPLEIKVVRQGTFDSLMDYFISQGASIGQY 552
Cdd:PLN02247 493 LFWELKTRGSNDPP----ELDPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQY 568
                        570       580
                 ....*....|....*....|....*
gi 15220661  553 KTPRCIKSGKALEVLEENVVATFFS 577
Cdd:PLN02247 569 KTPRCIKSEEALKILDSRVIGRFFS 593
GH3 pfam03321
GH3 auxin-responsive promoter;
18-562 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 707.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661    18 LEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFLGS-FDKESFKKNVPVVTYEDVKPYIERVVNGEPsNVISARPITGFV 96
Cdd:pfam03321   2 FEKLTKNAAEVQEEVLREILKRNANTEYGKRHGFGEiKSAEDFKKRVPIVTYEDLEPYIERIANGEP-NILTSDPITWFA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661    97 LSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISnnvKDVEKGKAMMFYFTKLESITPSGLPARVASSSYLKSNYFKNR 176
Cdd:pfam03321  81 LSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMP---RYFYKGKALYFLYVPEEGKTPGGLPAGPASTSYYKSDPFLLK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   177 PSnwyysYTSPDEVTLCPDNKQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRSGQLSEWI-TDI 255
Cdd:pfam03321 158 RL-----YTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWEELCEDIRTGTLSNVInTDP 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   256 GCRDSVSLVLGGPHPEAADTIEQICnQKCWKGIITRLWPKAKYIETIVTGSMVQYVPTLNYYSNNmLPLISTIYASSETQ 335
Cdd:pfam03321 233 SLRLALSKRLLGPNPELADELEEEC-EKGWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLRHYFGG-LPLVSEGYAASEGF 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   336 FGLNLNPMCKPeDVSYTFMPNVSYFEFIPVDGDKN-----DVVDLADVKLGCCYEAVVTNFSGLYRIRVGDILVVTGFHN 410
Cdd:pfam03321 311 FGINLDPLCPP-DVSYTLLPNSAYFEFIPVEEDEDeeenpETLDLVEVEVGKEYELVVTTYAGLYRYRIGDVVRVTGFYN 389
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   411 KAPQFRFIRRDNVVLSIDLDKTNEDDLFKAVNNA--KLTldssHLMLIDFTSYADIS-TIPGHYVVYWEVKNknedkksk 487
Cdd:pfam03321 390 QAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAakELT----GAELVDFTSYADTSeSIPGHYVLFWELKD-------- 457
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15220661   488 khiELKEETFSECCLLMEDSL---DSVYKICRfKEESVGPLEIKVVRQGTFDSLMDYFISQGASIGQYKTPRCIKSGK 562
Cdd:pfam03321 458 ---EPDLEVLEEFCKVLDESLqedNSDYRAKR-KDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVNSRE 531
 
Name Accession Description Interval E-value
PLN02247 PLN02247
indole-3-acetic acid-amido synthetase
15-577 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 165890  Cd Length: 606  Bit Score: 775.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   15 MKVLEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFLGSFDKESFKKNVPVVTYEDVKPYIERVVNGEPSNVISARPITG 94
Cdd:PLN02247  14 LKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLDGESDKQSFKNKVPVVNYEDIKPCIERIANGESSSIISAQPITE 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   95 FVLSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISNNVKDVEKGKAMMFYFTKLESITPSGLPARVASSSYLKSNYFK 174
Cdd:PLN02247  94 LLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSYYKSSNFR 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  175 NRPSNWYYSYTSPDEVTLCPDNKQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRSGQLSEWITD 254
Cdd:PLN02247 174 NRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGCVSDWITD 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  255 IGCRDSVSLVLGGPHPEAADTIEQICNQKCWKGIITRLWPKAKYIETIVTGSMVQYVPTLNYYSNNmLPLISTIYASSET 334
Cdd:PLN02247 254 PSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGG-LPLVSTMYASSEC 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  335 QFGLNLNPMCKPEDVSYTFMPNVSYFEFIPVDGD----------------------KNDVVDLADVKLGCCYEAVVTNFS 392
Cdd:PLN02247 333 YFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNngevihfvqcngtdddddalkeDLEIVDLVDVKVGHYYELVVTTFT 412
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  393 GLYRIRVGDILVVTGFHNKAPQFRFIRRDNVVLSIDLDKTNEDDLFKAVNNAKLTLDSSHLMLIDFTSYADISTIPGHYV 472
Cdd:PLN02247 413 GLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSSIPGHYV 492
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  473 VYWEVKNKNEDKKSkkhiELKEETFSECCLLMEDSLDSVYKICRFKEESVGPLEIKVVRQGTFDSLMDYFISQGASIGQY 552
Cdd:PLN02247 493 LFWELKTRGSNDPP----ELDPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQY 568
                        570       580
                 ....*....|....*....|....*
gi 15220661  553 KTPRCIKSGKALEVLEENVVATFFS 577
Cdd:PLN02247 569 KTPRCIKSEEALKILDSRVIGRFFS 593
GH3 pfam03321
GH3 auxin-responsive promoter;
18-562 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 707.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661    18 LEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFLGS-FDKESFKKNVPVVTYEDVKPYIERVVNGEPsNVISARPITGFV 96
Cdd:pfam03321   2 FEKLTKNAAEVQEEVLREILKRNANTEYGKRHGFGEiKSAEDFKKRVPIVTYEDLEPYIERIANGEP-NILTSDPITWFA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661    97 LSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISnnvKDVEKGKAMMFYFTKLESITPSGLPARVASSSYLKSNYFKNR 176
Cdd:pfam03321  81 LSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMP---RYFYKGKALYFLYVPEEGKTPGGLPAGPASTSYYKSDPFLLK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   177 PSnwyysYTSPDEVTLCPDNKQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRSGQLSEWI-TDI 255
Cdd:pfam03321 158 RL-----YTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWEELCEDIRTGTLSNVInTDP 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   256 GCRDSVSLVLGGPHPEAADTIEQICnQKCWKGIITRLWPKAKYIETIVTGSMVQYVPTLNYYSNNmLPLISTIYASSETQ 335
Cdd:pfam03321 233 SLRLALSKRLLGPNPELADELEEEC-EKGWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLRHYFGG-LPLVSEGYAASEGF 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   336 FGLNLNPMCKPeDVSYTFMPNVSYFEFIPVDGDKN-----DVVDLADVKLGCCYEAVVTNFSGLYRIRVGDILVVTGFHN 410
Cdd:pfam03321 311 FGINLDPLCPP-DVSYTLLPNSAYFEFIPVEEDEDeeenpETLDLVEVEVGKEYELVVTTYAGLYRYRIGDVVRVTGFYN 389
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   411 KAPQFRFIRRDNVVLSIDLDKTNEDDLFKAVNNA--KLTldssHLMLIDFTSYADIS-TIPGHYVVYWEVKNknedkksk 487
Cdd:pfam03321 390 QAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAakELT----GAELVDFTSYADTSeSIPGHYVLFWELKD-------- 457
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15220661   488 khiELKEETFSECCLLMEDSL---DSVYKICRfKEESVGPLEIKVVRQGTFDSLMDYFISQGASIGQYKTPRCIKSGK 562
Cdd:pfam03321 458 ---EPDLEVLEEFCKVLDESLqedNSDYRAKR-KDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVNSRE 531
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
7-577 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 166261  Cd Length: 612  Bit Score: 680.89  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661    7 LSEKSSDKMKVLEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFL-GSFDKESFKKNVPVVTYEDVKPYIERVVNGEPSN 85
Cdd:PLN02620  17 LAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLnGRTDRETFKKVMPVITYEDIQPDINRIANGDTSP 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   86 VISARPITGFVLSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISNNVKDVEKGKAMMFYFTKLESITPSGLPARVASS 165
Cdd:PLN02620  97 ILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPVLT 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  166 SYLKSNYFKNRPSNWYYSYTSPDEVTLCPDNKQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRS 245
Cdd:PLN02620 177 SYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRT 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  246 GQLSEWITDIGCRDSVSLVLgGPHPEAADTIEQICNQKCWKGIITRLWPKAKYIETIVTGSMVQYVPTLNYYSNNmLPLI 325
Cdd:PLN02620 257 GTIDSQITDPSVREAVMKIL-KPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNG-LPLV 334
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  326 STIYASSETQFGLNLNPMCKPEDVSYTFMPNVSYFEFIPV-----------------DGDKNDVVDLADVKLGCCYEAVV 388
Cdd:PLN02620 335 CTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVhrnngvtnsislpkslnEKEQQELVDLVDVKLGQEYELVV 414
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  389 TNFSGLYRIRVGDILVVTGFHNKAPQFRFIRRDNVVLSIDLDKTNEDDLFKAVNNAkltldSSHLM-----LIDFTSYAD 463
Cdd:PLN02620 415 TTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNA-----VNHLVpfdasLTEYTSYAD 489
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  464 ISTIPGHYVVYWEVKNKNEdkkskkhIELKEETFSECCLLMEDSLDSVYKICRFKEESVGPLEIKVVRQGTFDSLMDYFI 543
Cdd:PLN02620 490 TSTIPGHYVLFWELCLNGS-------TPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAI 562
                        570       580       590
                 ....*....|....*....|....*....|....
gi 15220661  544 SQGASIGQYKTPRCIKSGKALEVLEENVVATFFS 577
Cdd:PLN02620 563 SLGASINQYKTPRCVKFAPIIELLNSRVVSNYFS 596
PLN02249 PLN02249
indole-3-acetic acid-amido synthetase
8-578 0e+00

indole-3-acetic acid-amido synthetase


Pssm-ID: 177891  Cd Length: 597  Bit Score: 638.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661    8 SEKSSDKMKVLEDLTSNVTQIQDNVLEEILTLNANTNYLQKFFL-GSFDKESFKKNVPVVTYEDVKPYIERVVNGEPSNV 86
Cdd:PLN02249  17 SEKDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLnGAVDRKTFKSKVPVVTYEDLKTEIQRISNGDRSPI 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661   87 ISARPITGFVLSTGTSGGAQKMMPWNEKYLDNLTFMYDLRMHIISNNVKDVEKGKAMMFYFTKLESITPSGLPARVASSS 166
Cdd:PLN02249  97 LSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPALTS 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  167 YLKSNYFKNRPSNwyYSYTSPDEVTLCPDNKQNLYCHLLCGLVQRNEVTRMGSIFASVMVRAIKFLEDSWEELCSNIRSG 246
Cdd:PLN02249 177 YYKSDHFRTSDYD--NVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDISTG 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  247 QLSEWITDIGCRDSVSLVLGGPHPEAADTIEQICNQKCWKGIITRLWPKAKYIETIVTGSMVQYVPTLNYYSNNmLPLIS 326
Cdd:PLN02249 255 TLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGG-LPMAS 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  327 TIYASSETQFGLNLNPMCKPEDVSYTFMPNVSYFEFIP--VDGD----KNDVVDLADVKLGCCYEAVVTNFSGLYRIRVG 400
Cdd:PLN02249 334 TIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPhnHDGDgaldETSLVELADVEVGKEYELVITTYAGLYRYRVG 413
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  401 DILVVTGFHNKAPQFRFIRRDNVVLSIDLDKTNEDDLFKAVNNAKLTLDSSHLMLIDFTSYADISTIPGHYVVYWEVKNK 480
Cdd:PLN02249 414 DILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGHYVIYWELLGR 493
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15220661  481 NEDKKSkkhieLKEETFSECCLLMEDSLDSVYKICRFKEESVGPLEIKVVRQGTFDSLMDYFISQGASIGQYKTPRCIKS 560
Cdd:PLN02249 494 DQSNAL-----PSDEVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRCVSL 568
                        570
                 ....*....|....*...
gi 15220661  561 GKALEVLEENVVATFFST 578
Cdd:PLN02249 569 TPIMELLDSRVVSAHFSP 586
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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