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Conserved domains on  [gi|15219676|ref|NP_171918|]
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3-ketoacyl-CoA synthase 2 [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02192 super family cl30446
3-ketoacyl-CoA synthase
18-521 0e+00

3-ketoacyl-CoA synthase


The actual alignment was detected with superfamily member PLN02192:

Pssm-ID: 215123  Cd Length: 511  Bit Score: 875.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   18 TNKKLPNFLLSVRLKYVKLGYHYLISNAVYILILP-VGLLAATSSSFSLTDLTLLYNHLlKFHFLSSTLFAALLIFLTTL 96
Cdd:PLN02192  15 SSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPlVVVIAAQLSTFSIQDLHDLWEHL-KFNLISVILCSTLLVFLSTL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   97 YFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEAR 176
Cdd:PLN02192  94 YFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEAR 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  177 KEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQ 256
Cdd:PLN02192 174 KEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  257 VQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQRED 336
Cdd:PLN02192 254 VHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEED 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  337 NddNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNVkKIKPYIPDFKLAFEHFCIHAGGRA 416
Cdd:PLN02192 334 S--AGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKM-KLKPYIPDFKLAFEHFCIHAGGRA 410
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  417 VLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSKE 496
Cdd:PLN02192 411 VLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKE 490
                        490       500
                 ....*....|....*....|....*
gi 15219676  497 KkkktNPWIDEIHEFPVPVPRTSPV 521
Cdd:PLN02192 491 K----NPWMDEIHEFPVDVPKVSTI 511
 
Name Accession Description Interval E-value
PLN02192 PLN02192
3-ketoacyl-CoA synthase
18-521 0e+00

3-ketoacyl-CoA synthase


Pssm-ID: 215123  Cd Length: 511  Bit Score: 875.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   18 TNKKLPNFLLSVRLKYVKLGYHYLISNAVYILILP-VGLLAATSSSFSLTDLTLLYNHLlKFHFLSSTLFAALLIFLTTL 96
Cdd:PLN02192  15 SSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPlVVVIAAQLSTFSIQDLHDLWEHL-KFNLISVILCSTLLVFLSTL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   97 YFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEAR 176
Cdd:PLN02192  94 YFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEAR 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  177 KEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQ 256
Cdd:PLN02192 174 KEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  257 VQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQRED 336
Cdd:PLN02192 254 VHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEED 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  337 NddNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNVkKIKPYIPDFKLAFEHFCIHAGGRA 416
Cdd:PLN02192 334 S--AGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKM-KLKPYIPDFKLAFEHFCIHAGGRA 410
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  417 VLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSKE 496
Cdd:PLN02192 411 VLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKE 490
                        490       500
                 ....*....|....*....|....*
gi 15219676  497 KkkktNPWIDEIHEFPVPVPRTSPV 521
Cdd:PLN02192 491 K----NPWMDEIHEFPVDVPKVSTI 511
FAE1_CUT1_RppA pfam08392
FAE1/Type III polyketide synthase-like protein; The members of this family are described as ...
97-388 0e+00

FAE1/Type III polyketide synthase-like protein; The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.


Pssm-ID: 429970  Cd Length: 290  Bit Score: 550.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676    97 YFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEAR 176
Cdd:pfam08392   1 YLARRPRPVYLVDYSCYKPPDDRKVSTETFMEHIQRNGHLDLESLDFQRKILERSGLGEETYLPRAVLEGPPDPTLAEAR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   177 KEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQ 256
Cdd:pfam08392  81 EEAEEVIFGAVDDLFAKTGVSPRDIDILVVNCSLFNPTPSLSAMIVNRYKLRSDIKSYNLSGMGCSAGLISIDLAKNLLQ 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   257 VQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQRED 336
Cdd:pfam08392 161 VHPNTYALVVSTENITPNWYFGNDRSMLLPNCLFRMGGAAVLLSNRPADRRRAKYELVHTVRTHKGADDRAYNCVYQEED 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 15219676   337 NDDNkqIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKV 388
Cdd:pfam08392 241 EDGK--VGVSLSKDLMKVAGRALKTNITTLGPLVLPLSEQLRFAATLLARKL 290
CHS_like cd00831
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, ...
87-485 1.54e-150

Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.


Pssm-ID: 238427 [Multi-domain]  Cd Length: 361  Bit Score: 435.11  E-value: 1.54e-150
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  87 AALLIFLTTLYFTTRPRRIFLLDFACYKPDSsliCTRETFMDRSQRVGifteDNLAFQQKILERSGlGQKTYFP----EA 162
Cdd:cd00831   1 AATILAIGTAVPPHRVPQSELVDFYRRLFSS---DHLPELKEKLKRLC----AKTGIETRYLVLPG-GEETYAPrpemSP 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 163 LLRVPPNPCMSEARKEAETVMFGAIDavleKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCS 242
Cdd:cd00831  73 SLDERNDIALEEARELAEEAARGALD----EAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCS 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 243 AGLISIDLAKQLLQVQPNSYALVVSTENITLnWYLGND-RSMLLSNCIFRMGGAAVLLSNRSSDRCRskyqlihtvRTHK 321
Cdd:cd00831 149 AGAIALDLAKDLLEANPGARVLVVSTELCSL-WYRGPDhRSMLVGNALFGDGAAAVLLSNDPRDRRR---------ERPL 218
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 322 GSDDNAFNCVYQREDNDdnkqIGVSLSKnlmaiagEALKTNittLGPLVLPMSEQLLFFATLVARKvfnvkkiKPYIPDF 401
Cdd:cd00831 219 FELVRAASTLLPDSEDA----MGWHLGE-------EGLTFV---LSRDVPRLVEKNLERVLRKLLA-------RLGIGLF 277
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 402 KLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCN 481
Cdd:cd00831 278 KLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCE 357

                ....
gi 15219676 482 SAVW 485
Cdd:cd00831 358 SAVW 361
BH0617 COG3424
Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and ...
186-478 2.07e-37

Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442650 [Multi-domain]  Cd Length: 351  Bit Score: 141.05  E-value: 2.07e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 186 AIDAVLEKTGVNPKDIG-ILVVNCSLFNpTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYAL 264
Cdd:COG3424  84 AARRALDKAGLDPEDIDhLVTVSCTGFA-APGLDARLINRLGLRPDVRRLPVGGMGCAAGAAGLRRAADFLRADPDAVVL 162
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 265 VVSTENITLNWYLGND-RSMLLSNCIFRMGGAAVLLSnrSSDRCRSKYQLIHTvRTH---KGSDDNAFncvyqreDNDDN 340
Cdd:COG3424 163 VVCVELCSLTFQRDDDsKDNLVANALFGDGAAAVVVS--GDPRPGPGPRILAF-RSYlipDTEDVMGW-------DVGDT 232
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 341 KqIGVSLSKNLMAIAGEALKTNIttlgplvlpmsEQLLffatlvarkvfnvKKIKPYIPDfklaFEHFCIHAGGRAVLDE 420
Cdd:COG3424 233 G-FRMVLSPEVPDLIAEHLAPAV-----------EPLL-------------ARHGLTIED----IDHWAVHPGGPKVLDA 283
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 15219676 421 IEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGF 478
Cdd:COG3424 284 VEEALGLPPEALAHSREVLREYGNMSSATVLFVLERLLEEGAPAPGERGLAMAFGPGF 341
fabH TIGR00747
3-oxoacyl-(acyl-carrier-protein) synthase III; FabH in general initiate elongation in type II ...
178-486 3.92e-15

3-oxoacyl-(acyl-carrier-protein) synthase III; FabH in general initiate elongation in type II fatty acid synthase systems found in bacteria and plants. The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from E. coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 273249 [Multi-domain]  Cd Length: 318  Bit Score: 76.27  E-value: 3.92e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   178 EAETVMFGAIDA---VLEKTGVNPKDI-GILVVNCSLFNPTPSLSAMIVNKYKLRgNVLSYNLGGmGCSAGLISIDLAKQ 253
Cdd:TIGR00747  47 DDETSSTMGFEAakrAIENAGISKDDIdLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLSA-ACAGFIYALSVAKQ 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   254 LLQVQPNSYALVVSTENI--TLNWYlgnDRSmllsNCI-FRMGGAAVLLSNRSSDRcrskyqliHTVRTHKGSDDNAFNC 330
Cdd:TIGR00747 125 YIESGKYKTVLVVGAEKLssTLDWT---DRG----TCVlFGDGAGAVVLGESEDPG--------GIISTHLGADGTQGEA 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   331 VYQredndDNKQIGVSLSKNLMAIAG-EALKTNITTLGPLVlpmsEQLLFFATLvarkvfNVKKIKPYIPdfklafehfc 409
Cdd:TIGR00747 190 LYL-----PAGGRPTSGPSPFITMEGnEVFKHAVRKMGDVV----EETLEANGL------DPEDIDWFVP---------- 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   410 iHAGGRAVLDEIEKNLDlsewhMEPSRM--TLNRFGNTSSSSLwyELAYSEAK--GRIKRGDRTWQIAFGSGFKCNSAVW 485
Cdd:TIGR00747 245 -HQANLRIIEALAKRLE-----LDMSQVvkTVHKYGNTSAASI--PLALDELLrtGRIKPGDLLLLVAFGGGLTWGAALV 316

                  .
gi 15219676   486 R 486
Cdd:TIGR00747 317 R 317
 
Name Accession Description Interval E-value
PLN02192 PLN02192
3-ketoacyl-CoA synthase
18-521 0e+00

3-ketoacyl-CoA synthase


Pssm-ID: 215123  Cd Length: 511  Bit Score: 875.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   18 TNKKLPNFLLSVRLKYVKLGYHYLISNAVYILILP-VGLLAATSSSFSLTDLTLLYNHLlKFHFLSSTLFAALLIFLTTL 96
Cdd:PLN02192  15 SSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPlVVVIAAQLSTFSIQDLHDLWEHL-KFNLISVILCSTLLVFLSTL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   97 YFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEAR 176
Cdd:PLN02192  94 YFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEAR 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  177 KEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQ 256
Cdd:PLN02192 174 KEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  257 VQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQRED 336
Cdd:PLN02192 254 VHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEED 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  337 NddNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNVkKIKPYIPDFKLAFEHFCIHAGGRA 416
Cdd:PLN02192 334 S--AGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKM-KLKPYIPDFKLAFEHFCIHAGGRA 410
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  417 VLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSKE 496
Cdd:PLN02192 411 VLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKE 490
                        490       500
                 ....*....|....*....|....*
gi 15219676  497 KkkktNPWIDEIHEFPVPVPRTSPV 521
Cdd:PLN02192 491 K----NPWMDEIHEFPVDVPKVSTI 511
PLN02854 PLN02854
3-ketoacyl-CoA synthase
20-516 0e+00

3-ketoacyl-CoA synthase


Pssm-ID: 215459  Cd Length: 521  Bit Score: 755.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   20 KKLPNFLLSVRLKYVKLGYHYLISNAV---YILILPvgLLAATSSSFSLTDLTLLY----NHLLKFHFLSSTLFAALLIF 92
Cdd:PLN02854  24 QRLPDFLQSVKLKYVKLGYGYSCNPATilfFLIILP--LTIATLVQITGLEFDTVSelwsNQALHLDTATRLTGSAFLLF 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   93 LTTLYFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCM 172
Cdd:PLN02854 102 LLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCM 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  173 SEARKEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAK 252
Cdd:PLN02854 182 EEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLAN 261
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  253 QLLQVQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVY 332
Cdd:PLN02854 262 DLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVY 341
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  333 QREdnDDNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNVkKIKPYIPDFKLAFEHFCIHA 412
Cdd:PLN02854 342 QRE--DDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKA-KVKPYIPDFKLAFEHFCIHA 418
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  413 GGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTId 492
Cdd:PLN02854 419 GGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALREI- 497
                        490       500
                 ....*....|....*....|....
gi 15219676  493 PSKEkkKKTNPWIDEIHEFPVPVP 516
Cdd:PLN02854 498 PTGE--STGNPWADSIDRYPVKVP 519
PLN02377 PLN02377
3-ketoacyl-CoA synthase
15-513 0e+00

3-ketoacyl-CoA synthase


Pssm-ID: 166018  Cd Length: 502  Bit Score: 697.54  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   15 IHVTnKKLPNFLLSVRLKYVKLGYHYLISNAVYILILPVGLLAAT-SSSFSLTDLTLLYNHLlKFHFLSSTLFAALLIFL 93
Cdd:PLN02377   9 IHQT-RMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIeASQMNPDDLRQLWIHL-QYNLVSIIICSAFLVFG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   94 TTLYFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMS 173
Cdd:PLN02377  87 LTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  174 EARKEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQ 253
Cdd:PLN02377 167 AAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKD 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  254 LLQVQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQ 333
Cdd:PLN02377 247 MLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQ 326
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  334 REdnDDNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNvKKIKPYIPDFKLAFEHFCIHAG 413
Cdd:PLN02377 327 EQ--DDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFN-KKMKPYIPDFKLAFDHFCIHAG 403
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  414 GRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDP 493
Cdd:PLN02377 404 GRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKP 483
                        490       500
                 ....*....|....*....|
gi 15219676  494 SkekkkKTNPWIDEIHEFPV 513
Cdd:PLN02377 484 S-----NNSPWEDCIDKYPV 498
PLN02932 PLN02932
3-ketoacyl-CoA synthase
38-515 0e+00

3-ketoacyl-CoA synthase


Pssm-ID: 178520  Cd Length: 478  Bit Score: 597.40  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   38 YHYLISNAVYILILPVGL-LAATSSSFSLTDLTLLYNHLLKFHfLSSTLFAALLIFLTTLYFTTRPRRIFLLDFACYKPD 116
Cdd:PLN02932   1 FNYLMAHRFKLCFLPLMVgIAMEASRLSTQDLQNFYLYLQNNL-TSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPP 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  117 SSLICTRETFMDRSQRV---GIFTEDN---LAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEARKEAETVMFGAIDAV 190
Cdd:PLN02932  80 SHLKASIQTIMGHVRRVreaGAWKQESdylMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  191 LEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYALVVSTEN 270
Cdd:PLN02932 160 FRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTEN 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  271 ITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQREDNDDnkQIGVSLSKN 350
Cdd:PLN02932 240 ITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDG--IVGVSLSKN 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  351 LMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNvKKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEW 430
Cdd:PLN02932 318 LPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFN-PKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPL 396
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  431 HMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSkekkkKTNPWIDEIHE 510
Cdd:PLN02932 397 DVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPS-----ANNPWEDCLHK 471

                 ....*
gi 15219676  511 FPVPV 515
Cdd:PLN02932 472 YPVEI 476
FAE1_CUT1_RppA pfam08392
FAE1/Type III polyketide synthase-like protein; The members of this family are described as ...
97-388 0e+00

FAE1/Type III polyketide synthase-like protein; The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.


Pssm-ID: 429970  Cd Length: 290  Bit Score: 550.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676    97 YFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEAR 176
Cdd:pfam08392   1 YLARRPRPVYLVDYSCYKPPDDRKVSTETFMEHIQRNGHLDLESLDFQRKILERSGLGEETYLPRAVLEGPPDPTLAEAR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   177 KEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQ 256
Cdd:pfam08392  81 EEAEEVIFGAVDDLFAKTGVSPRDIDILVVNCSLFNPTPSLSAMIVNRYKLRSDIKSYNLSGMGCSAGLISIDLAKNLLQ 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   257 VQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQRED 336
Cdd:pfam08392 161 VHPNTYALVVSTENITPNWYFGNDRSMLLPNCLFRMGGAAVLLSNRPADRRRAKYELVHTVRTHKGADDRAYNCVYQEED 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 15219676   337 NDDNkqIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKV 388
Cdd:pfam08392 241 EDGK--VGVSLSKDLMKVAGRALKTNITTLGPLVLPLSEQLRFAATLLARKL 290
PLN00415 PLN00415
3-ketoacyl-CoA synthase
64-515 0e+00

3-ketoacyl-CoA synthase


Pssm-ID: 177808  Cd Length: 466  Bit Score: 537.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   64 SLTDLTLLYNHllkfHFLSSTLFAALLIFLTTLYF----TTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTED 139
Cdd:PLN00415  19 SLFELDLLHFH----HDFFSPFPVKIGLLLISIFFyaysTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEE 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  140 NLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEARKEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSA 219
Cdd:PLN00415  95 TIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSS 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  220 MIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLL 299
Cdd:PLN00415 175 MIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVML 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  300 SNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQREDNddNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLF 379
Cdd:PLN00415 255 SNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDS--KGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRF 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  380 FATLVARKVFNVkKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEA 459
Cdd:PLN00415 333 ILFLVKSKLFRL-KVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEA 411
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 15219676  460 KGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIdPSKEKKKKtNPWIDEIHEFPVPV 515
Cdd:PLN00415 412 KCRVKRGDRVWQLAFGSGFKCNSIVWRALRTI-PANESLVG-NPWGDSVHKYPVHV 465
CHS_like cd00831
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, ...
87-485 1.54e-150

Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.


Pssm-ID: 238427 [Multi-domain]  Cd Length: 361  Bit Score: 435.11  E-value: 1.54e-150
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  87 AALLIFLTTLYFTTRPRRIFLLDFACYKPDSsliCTRETFMDRSQRVGifteDNLAFQQKILERSGlGQKTYFP----EA 162
Cdd:cd00831   1 AATILAIGTAVPPHRVPQSELVDFYRRLFSS---DHLPELKEKLKRLC----AKTGIETRYLVLPG-GEETYAPrpemSP 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 163 LLRVPPNPCMSEARKEAETVMFGAIDavleKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCS 242
Cdd:cd00831  73 SLDERNDIALEEARELAEEAARGALD----EAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCS 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 243 AGLISIDLAKQLLQVQPNSYALVVSTENITLnWYLGND-RSMLLSNCIFRMGGAAVLLSNRSSDRCRskyqlihtvRTHK 321
Cdd:cd00831 149 AGAIALDLAKDLLEANPGARVLVVSTELCSL-WYRGPDhRSMLVGNALFGDGAAAVLLSNDPRDRRR---------ERPL 218
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 322 GSDDNAFNCVYQREDNDdnkqIGVSLSKnlmaiagEALKTNittLGPLVLPMSEQLLFFATLVARKvfnvkkiKPYIPDF 401
Cdd:cd00831 219 FELVRAASTLLPDSEDA----MGWHLGE-------EGLTFV---LSRDVPRLVEKNLERVLRKLLA-------RLGIGLF 277
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 402 KLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCN 481
Cdd:cd00831 278 KLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCE 357

                ....
gi 15219676 482 SAVW 485
Cdd:cd00831 358 SAVW 361
BH0617 COG3424
Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and ...
186-478 2.07e-37

Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442650 [Multi-domain]  Cd Length: 351  Bit Score: 141.05  E-value: 2.07e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 186 AIDAVLEKTGVNPKDIG-ILVVNCSLFNpTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYAL 264
Cdd:COG3424  84 AARRALDKAGLDPEDIDhLVTVSCTGFA-APGLDARLINRLGLRPDVRRLPVGGMGCAAGAAGLRRAADFLRADPDAVVL 162
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 265 VVSTENITLNWYLGND-RSMLLSNCIFRMGGAAVLLSnrSSDRCRSKYQLIHTvRTH---KGSDDNAFncvyqreDNDDN 340
Cdd:COG3424 163 VVCVELCSLTFQRDDDsKDNLVANALFGDGAAAVVVS--GDPRPGPGPRILAF-RSYlipDTEDVMGW-------DVGDT 232
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 341 KqIGVSLSKNLMAIAGEALKTNIttlgplvlpmsEQLLffatlvarkvfnvKKIKPYIPDfklaFEHFCIHAGGRAVLDE 420
Cdd:COG3424 233 G-FRMVLSPEVPDLIAEHLAPAV-----------EPLL-------------ARHGLTIED----IDHWAVHPGGPKVLDA 283
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 15219676 421 IEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGF 478
Cdd:COG3424 284 VEEALGLPPEALAHSREVLREYGNMSSATVLFVLERLLEEGAPAPGERGLAMAFGPGF 341
FabH COG0332
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
178-486 7.68e-20

3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440101 [Multi-domain]  Cd Length: 323  Bit Score: 90.55  E-value: 7.68e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 178 EAETVMFGAIDAV---LEKTGVNPKDIG-ILVVNCSLFNPTPSLSAMIVNKYKLRgNVLSYNLGGmGCSAGLISIDLAKQ 253
Cdd:COG0332  47 PDETTSDLAVEAArkaLEAAGIDPEDIDlIIVATVTPDYLFPSTACLVQHKLGAK-NAAAFDINA-ACSGFVYALSVAAA 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 254 LLQVQPNSYALVVSTENIT--LNWylgNDR--SMLLSNcifrmGGAAVLLSnrssdRCRSKYQLIHTvrtHKGSDDNAFN 329
Cdd:COG0332 125 LIRSGQAKNVLVVGAETLSriVDW---TDRstCVLFGD-----GAGAVVLE-----ASEEGPGILGS---VLGSDGSGAD 188
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 330 CVYQREDNDDNKQIGVSLSKNLMAIAGEAL-KTNITTLGPLVlpmsEQLLFFATLvarkvfNVKKIKpyipdfklafeHF 408
Cdd:COG0332 189 LLVVPAGGSRNPPSPVDEGDHYLRMDGREVfKFAVRNLPEVI----REALEKAGL------TLDDID-----------WF 247
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 409 CIHAGGRAVLDEIEKNLDLSEwhmepSR--MTLNRFGNTSSSSLwyELAYSEA--KGRIKRGDRTWQIAFGSGFKCNSAV 484
Cdd:COG0332 248 IPHQANLRIIEAVAKRLGLPE-----EKvvVNIDRYGNTSAASI--PLALDEAlrEGRIKPGDLVLLAGFGAGLTWGAAV 320

                ..
gi 15219676 485 WR 486
Cdd:COG0332 321 LR 322
KAS_III cd00830
Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty ...
178-485 2.99e-17

Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.


Pssm-ID: 238426 [Multi-domain]  Cd Length: 320  Bit Score: 82.59  E-value: 2.99e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 178 EAETVMFGAIDAV---LEKTGVNPKDIG-ILVVNCSLFNPTPSLSAMIVNKYKLrGNVLSYNLGGmGCSAGLISIDLAKQ 253
Cdd:cd00830  46 PGETTSDLAVEAAkkaLEDAGIDADDIDlIIVATSTPDYLFPATACLVQARLGA-KNAAAFDINA-ACSGFLYGLSTAAG 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 254 LLQVQPNSYALVVSTENIT--LNWylgNDRSMllsnC-IFRMGGAAVLLSnrssdRCRSKYQLIHTVRthkGSDDNAFNC 330
Cdd:cd00830 124 LIRSGGAKNVLVVGAETLSriLDW---TDRST----AvLFGDGAGAVVLE-----ATEEDPGILDSVL---GSDGSGADL 188
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 331 VYQREDNDDNKQIGVSLSKNLMAIAG-EALKTNITTLGPLVlpmsEQLLFFATLVARKVfnvkkikpyipdfklafEHFC 409
Cdd:cd00830 189 LTIPAGGSRSPFEDAEGGDPYLVMDGrEVFKFAVRLMPESI----EEALEKAGLTPDDI-----------------DWFV 247
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15219676 410 IHAGGRAVLDEIEKNLDLSewhMEPSRMTLNRFGNTSSSSLwyELAYSEA--KGRIKRGDRTWQIAFGSGFKCNSAVW 485
Cdd:cd00830 248 PHQANLRIIEAVAKRLGLP---EEKVVVNLDRYGNTSAASI--PLALDEAieEGKLKKGDLVLLLGFGAGLTWGAALL 320
fabH TIGR00747
3-oxoacyl-(acyl-carrier-protein) synthase III; FabH in general initiate elongation in type II ...
178-486 3.92e-15

3-oxoacyl-(acyl-carrier-protein) synthase III; FabH in general initiate elongation in type II fatty acid synthase systems found in bacteria and plants. The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from E. coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 273249 [Multi-domain]  Cd Length: 318  Bit Score: 76.27  E-value: 3.92e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   178 EAETVMFGAIDA---VLEKTGVNPKDI-GILVVNCSLFNPTPSLSAMIVNKYKLRgNVLSYNLGGmGCSAGLISIDLAKQ 253
Cdd:TIGR00747  47 DDETSSTMGFEAakrAIENAGISKDDIdLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLSA-ACAGFIYALSVAKQ 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   254 LLQVQPNSYALVVSTENI--TLNWYlgnDRSmllsNCI-FRMGGAAVLLSNRSSDRcrskyqliHTVRTHKGSDDNAFNC 330
Cdd:TIGR00747 125 YIESGKYKTVLVVGAEKLssTLDWT---DRG----TCVlFGDGAGAVVLGESEDPG--------GIISTHLGADGTQGEA 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   331 VYQredndDNKQIGVSLSKNLMAIAG-EALKTNITTLGPLVlpmsEQLLFFATLvarkvfNVKKIKPYIPdfklafehfc 409
Cdd:TIGR00747 190 LYL-----PAGGRPTSGPSPFITMEGnEVFKHAVRKMGDVV----EETLEANGL------DPEDIDWFVP---------- 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   410 iHAGGRAVLDEIEKNLDlsewhMEPSRM--TLNRFGNTSSSSLwyELAYSEAK--GRIKRGDRTWQIAFGSGFKCNSAVW 485
Cdd:TIGR00747 245 -HQANLRIIEALAKRLE-----LDMSQVvkTVHKYGNTSAASI--PLALDELLrtGRIKPGDLLLLVAFGGGLTWGAALV 316

                  .
gi 15219676   486 R 486
Cdd:TIGR00747 317 R 317
init_cond_enzymes cd00827
"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, ...
186-478 3.72e-13

"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.


Pssm-ID: 238423 [Multi-domain]  Cd Length: 324  Bit Score: 70.54  E-value: 3.72e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 186 AIDAV---LEKTGVNPKDIG-ILVVNCSLFNPTPSlSAMIVNKYKLRGNVLSYNLGGmGCSAGLISIDLAKQLLQVQPNS 261
Cdd:cd00827  52 AVEAArraLERAGIDPDDIGlLIVATESPIDKGKS-AATYLAELLGLTNAEAFDLKQ-ACYGGTAALQLAANLVESGPWR 129
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 262 YALVVSTENITlnwYLGNDRSmlLSNCIFRMGGAAVLLSNRSSDRcrskyqLIHTVRTHKGSDDNAFNCVY------QRE 335
Cdd:cd00827 130 YALVVASDIAS---YLLDEGS--ALEPTLGDGAAAMLVSRNPGIL------AAGIVSTHSTSDPGYDFSPYpvmdggYPK 198
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676 336 DNDDNKQIGVSLSKNLMAIAgEALKTNITTlgplvlpmseqllffatlVARKVFNVKKIKPYIPDFklafehFCIHAGGR 415
Cdd:cd00827 199 PCKLAYAIRLTAEPAGRAVF-EAAHKLIAK------------------VVRKALDRAGLSEDIDYF------VPHQPNGK 253
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15219676 416 AVLDEIEKNLDLSEWHMEPSRMTLNRF-GNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGF 478
Cdd:cd00827 254 KILEAVAKKLGGPPEKASQTRWILLRRvGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGF 317
ACP_syn_III_C pfam08541
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on ...
407-486 9.12e-11

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430060  Cd Length: 90  Bit Score: 58.28  E-value: 9.12e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   407 HFCIHAGGRAVLDEIEKNLDLSEwhmEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWR 486
Cdd:pfam08541  13 WFVPHQANLRIIDAVAKRLGLPP---EKVVVNLDEYGNTSAASIPLALDEAVEEGKLKPGDLVLLVGFGAGLTWGAALLR 89
PLN03169 PLN03169
chalcone synthase family protein; Provisional
410-477 8.80e-08

chalcone synthase family protein; Provisional


Pssm-ID: 215612 [Multi-domain]  Cd Length: 391  Bit Score: 54.32  E-value: 8.80e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15219676  410 IHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAY-SEAKGRIKRGDRTWQI--AFGSG 477
Cdd:PLN03169 308 VHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYmREELKKKGEEDEEWGLilAFGPG 378
PLN03171 PLN03171
chalcone synthase-like protein; Provisional
200-491 2.01e-07

chalcone synthase-like protein; Provisional


Pssm-ID: 178715 [Multi-domain]  Cd Length: 399  Bit Score: 53.47  E-value: 2.01e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  200 DIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYALVVSTEnITLNWYLGN 279
Cdd:PLN03171 129 DITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAE-ITLLLFNGP 207
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  280 DRS---MLLSNCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQREDNDdnkqiGVSLSKNLMAIAG 356
Cdd:PLN03171 208 DEGcfqTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAIIPESDDAINMHFTEGGLD-----GNIGTRQVPGLIG 282
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  357 EALKTNIT-TLGPL---VLPMSEQLLFFAtlvarkvfnvkkikpyipdfklafehfcIHAGGRAVLDEIEKNLDLSEWHM 432
Cdd:PLN03171 283 DNIERCLLdAFAPLlggDGGAEWNDLFWA----------------------------VHPGSSAILDQVDAALGLEPEKL 334
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15219676  433 EPSRMTLNRFGNTSSSSLWYELaySEAKGRIKRGDR--TW-----QIAFGSGFKCNSAVWRALRTI 491
Cdd:PLN03171 335 AASRRVLSDYGNMFGATVIFAL--DELRRQMEEAAAagAWpelgvMMAFGPGLTVDAMLLHASGHP 398
PRK09352 PRK09352
beta-ketoacyl-ACP synthase 3;
191-486 8.80e-07

beta-ketoacyl-ACP synthase 3;


Pssm-ID: 236475 [Multi-domain]  Cd Length: 319  Bit Score: 50.84  E-value: 8.80e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  191 LEKTGVNPKDIG-ILVVNCSLFNPTPSLSAMIVNKYKLrGNVLSYNLGGmGCSAGLISIDLAKQLLQVQPNSYALVVSTE 269
Cdd:PRK09352  64 LEAAGIDPEDIDlIIVATTTPDYAFPSTACLVQARLGA-KNAAAFDLSA-ACSGFVYALSTADQFIRSGAYKNVLVIGAE 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  270 NIT--LNWylgNDRSmllsNCI-FRMGGAAVLLSnrssdrcRSKYQLIHTvrTHKGSDDNAFNCVYQREDNDDNKQIGVS 346
Cdd:PRK09352 142 KLSriVDW---TDRS----TCVlFGDGAGAVVLG-------ASEEPGILS--THLGSDGSYGDLLYLPGGGSRGPASPGY 205
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  347 LS-----------KNLMAIAGEAL-KTNITtlgplvlpmSEQLLFFatlvarkvfnvkkikpyIPdfklafehfciH-AG 413
Cdd:PRK09352 206 LRmegrevfkfavRELAKVAREALeAAGLT---------PEDIDWL-----------------VP-----------HqAN 248
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15219676  414 GRaVLDEIEKNLDLSewhMEPSRMTLNRFGNTSSSSLwyELAYSEA--KGRIKRGDRTWQIAFGSGFKCNSAVWR 486
Cdd:PRK09352 249 LR-IIDATAKKLGLP---MEKVVVTVDKYGNTSAASI--PLALDEAvrDGRIKRGDLVLLEGFGGGLTWGAALVR 317
Chal_sti_synt_C pfam02797
Chalcone and stilbene synthases, C-terminal domain; This domain of chalcone synthase is ...
410-488 2.56e-06

Chalcone and stilbene synthases, C-terminal domain; This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain.


Pssm-ID: 397089  Cd Length: 151  Bit Score: 47.45  E-value: 2.56e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676   410 IHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAY---SEAKGRIKRGDRT--WQI--AFGSGFKCNS 482
Cdd:pfam02797  65 VHPGGPAILDRVETKLGLEPEKLEASRRALMDYGNVSSATVLFILDEmrkKSLKKGLATTGEGldWGVllAFGPGLTFET 144

                  ....*.
gi 15219676   483 AVWRAL 488
Cdd:pfam02797 145 VVLRSV 150
PLN02326 PLN02326
3-oxoacyl-[acyl-carrier-protein] synthase III
180-486 3.13e-06

3-oxoacyl-[acyl-carrier-protein] synthase III


Pssm-ID: 215185  Cd Length: 379  Bit Score: 49.35  E-value: 3.13e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  180 ETVMFGAIDA---VLEKTGVNPKDIGiLVVNCS-----LFNPTPSLSAMIVNKyklrgNVLSYNLGGmGCSAGLISIDLA 251
Cdd:PLN02326  94 ETLTSLAVEAakkALEMAGVDPEDVD-LVLLCTsspddLFGSAPQVQAALGCT-----NALAFDLTA-ACSGFVLGLVTA 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  252 KQLLQVQPNSYALVVSTENIT--LNWylgNDRSmllsNCI-FRMGGAAVLLSNRSSDRCRSKYQLIHTvrthKGSDDNAF 328
Cdd:PLN02326 167 ARFIRGGGYKNVLVIGADALSryVDW---TDRG----TCIlFGDGAGAVVLQACDDDEDGLLGFDMHS----DGNGHKHL 235
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  329 NCVYQREDNDDNKQIGVSLSKnlmAIAGEALKTNITtlgplvlpMSEQLLF-FATLVARKVFNVKKIKPYIPdfKLAFEH 407
Cdd:PLN02326 236 HATFKGEDDDSSGGNTNGVGD---FPPKKASYSCIQ--------MNGKEVFkFAVRCVPQVIESALQKAGLT--AESIDW 302
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  408 FCIHAGGRAVLDEIEKNLDLSewhMEPSRMTLNRFGNTSSSSLwyELAYSEA--KGRIKRGDRTWQIAFGSGFKCNSAVW 485
Cdd:PLN02326 303 LLLHQANQRIIDAVAQRLGIP---PEKVISNLANYGNTSAASI--PLALDEAvrSGKVKKGDVIATAGFGAGLTWGSAIV 377

                 .
gi 15219676  486 R 486
Cdd:PLN02326 378 R 378
PLN03172 PLN03172
chalcone synthase family protein; Provisional
227-477 7.19e-06

chalcone synthase family protein; Provisional


Pssm-ID: 178716  Cd Length: 393  Bit Score: 48.51  E-value: 7.19e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  227 LRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYALVVSTENITLNWYLGNDRSM--LLSNCIFRMGGAAVLL-SNRS 303
Cdd:PLN03172 150 LKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLdsLVGQALFGDGAAAVIIgADPD 229
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  304 SDRCRSKYQLIHTVRTHKGSDDNAFNCvYQREdnddnkqigVSLSKNLMAIAGEALKTNIttlgplvlpmsEQLLffatl 383
Cdd:PLN03172 230 TKIERPLFEIVSAAQTILPDSDGAIDG-HLRE---------VGLTFHLLKDVPGLISKNI-----------EKSL----- 283
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  384 varkvfnVKKIKPY-IPDFKLAFehFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYEL------AY 456
Cdd:PLN03172 284 -------VEAFAPIgINDWNSIF--WIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILdemrkkSI 354
                        250       260
                 ....*....|....*....|.
gi 15219676  457 SEAKGRIKRGdRTWQIAFGSG 477
Cdd:PLN03172 355 EEGKGSTGEG-LEWGVLFGFG 374
PLN03168 PLN03168
chalcone synthase; Provisional
399-491 1.41e-05

chalcone synthase; Provisional


Pssm-ID: 178712 [Multi-domain]  Cd Length: 389  Bit Score: 47.34  E-value: 1.41e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  399 PDFKLAFehFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGrIKRGDRT--------W 470
Cdd:PLN03168 292 PDWNEMF--WAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQRS-VKMGASTlgegsefgF 368
                         90       100
                 ....*....|....*....|.
gi 15219676  471 QIAFGSGFKCNSAVWRALRTI 491
Cdd:PLN03168 369 FIGFGPGLTLEVLVLRAAANV 389
PLN03170 PLN03170
chalcone synthase; Provisional
227-477 1.52e-05

chalcone synthase; Provisional


Pssm-ID: 178714 [Multi-domain]  Cd Length: 401  Bit Score: 47.40  E-value: 1.52e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  227 LRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYALVVSTEnITLNWYLGNDRSML---LSNCIFRMGGAAVLLSNRS 303
Cdd:PLN03170 154 LRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSE-ITAVTFRGPSESHLdsmVGQALFGDGAAAVIVGADP 232
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  304 SDRC-RSKYQLIHTVRTHKGSDDNAFNCvYQREdnddnkqigVSLSKNLMAIAGEALKTNIT-TLGPLVLPMSeqllffa 381
Cdd:PLN03170 233 DERVeRPLFQLVSASQTILPDSEGAIDG-HLRE---------VGLTFHLLKDVPGLISKNIErSLEEAFKPLG------- 295
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  382 tlvarkvfnvkkikpyIPDFKLAFehFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYEL----AYS 457
Cdd:PLN03170 296 ----------------ITDYNSIF--WVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILdemrKRS 357
                        250       260
                 ....*....|....*....|.
gi 15219676  458 EAKGRIKRGD-RTWQIAFGSG 477
Cdd:PLN03170 358 AEDGQATTGEgFDWGVLFGFG 378
PRK12879 PRK12879
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
186-478 1.81e-05

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 237245 [Multi-domain]  Cd Length: 325  Bit Score: 46.78  E-value: 1.81e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  186 AIDAV---LEKTGVNPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLRgNVLSYNLGGmGCSAGLISIDLAKQLLQVQPNS 261
Cdd:PRK12879  57 AIKAAeraLARAGLDAEDIDLIIVAtTTPDYLFPSTASQVQARLGIP-NAAAFDINA-ACAGFLYGLETANGLITSGLYK 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  262 YALVVSTEniTLNWYLG-NDRsmllSNCI-FRMGGAAVLLSNRSSDrcrskyqlIHTVRTHKGSDDNAFNCVYQREDNDD 339
Cdd:PRK12879 135 KVLVIGAE--RLSKVTDyTDR----TTCIlFGDGAGAVVLEATENE--------PGFIDYVLGTDGDGGDILYRTGLGTT 200
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  340 NKQIGVSLSKNLMAIAGEALKTNITTLGPLVlpmseqllffATLVARKVFNVKKIKPYIPdfklafehfciHAGGRAVLD 419
Cdd:PRK12879 201 MDRDALSGDGYIVQNGREVFKWAVRTMPKGA----------RQVLEKAGLTKDDIDWVIP-----------HQANLRIIE 259
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15219676  420 EIEKNLDLSewhMEPSRMTLNRFGNTSSSSLwyELAYSEA--KGRIKRGDRTWQIAFGSGF 478
Cdd:PRK12879 260 SLCEKLGIP---MEKTLVSVEYYGNTSAATI--PLALDLAleQGKIKPGDTLLLYGFGAGL 315
PRK09258 PRK09258
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
185-480 1.09e-03

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 181732  Cd Length: 338  Bit Score: 41.40  E-value: 1.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  185 GAIDA---VLEKTGVNPKDIGiLVVNCSLFNPT--PSLSAMIVNKYKLRGNVLSYN-----LG---GMGCSAGLIsidla 251
Cdd:PRK09258  64 GAIAAgrkALAEAGIDPSDIG-LLINTSVCRDYlePATACRVHHNLGLPKSCANFDvsnacLGflnGMLDAANMI----- 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  252 kQLLQVqpnSYALVVSTEN------ITLnwylgnDRsmLLSNCIFR-------------MGGAAVLLSNrsSDRCRSKYQ 312
Cdd:PRK09258 138 -ELGQI---DYALVVSGESareiveATI------DR--LLAPETTRedfaqsfatltlgSGAAAAVLTR--GSLHPRGHR 203
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  313 LIHTVrTHKGSDDNAFnCVYQRED-NDDnkqiGVSLSKNLMAIAGEALKTNITTLGplvlpmseqllffatlvarkvFNV 391
Cdd:PRK09258 204 LLGGV-TRAATEHHEL-CQGGRDGmRTD----AVGLLKEGVELAVDTWEAFLAQLG---------------------WAV 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15219676  392 KKIKPYIpdfklafehfcIHAGGRAVLDEIEKNLDLSewhmePSRM--TLNRFGNTSSSSLWYELAYSEAKGRIKRGDRT 469
Cdd:PRK09258 257 EQVDRVI-----------CHQVGAAHTRAILKALGID-----PEKVftTFPTLGNMGPASLPITLAMAAEEGFLKPGDRV 320
                        330
                 ....*....|.
gi 15219676  470 WQIAFGSGFKC 480
Cdd:PRK09258 321 ALLGIGSGLNC 331
ACP_syn_III pfam08545
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl- ...
239-308 2.15e-03

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430064 [Multi-domain]  Cd Length: 80  Bit Score: 37.11  E-value: 2.15e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15219676   239 MGCSAGLISIDLAKQLLQVQPNSYALVVSTENIT--LNWylgNDRSmllSNCIFRMGGAAVLLSNRSSDRCR 308
Cdd:pfam08545   5 AACSGFVYALSTAAALIRSGRAKNVLVIGAETLSkiLDW---TDRS---TAVLFGDGAGAVVLEATDEPGAR 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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