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Conserved domains on  [gi|30678573|ref|NP_171846|]
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Kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

Protein Classification

KIP1 and Smc domain-containing protein( domain architecture ID 10544173)

KIP1 and Smc domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
KIP1 pfam07765
KIP1-like protein; This is a family of sequences found exclusively in plants. They are similar ...
 8-81 2.58e-38

KIP1-like protein; This is a family of sequences found exclusively in plants. They are similar to kinase interacting protein 1 (KIP1), which has been found to interact with the kinase domain of PRK1, a receptor-like kinase. This particular region contains two coiled-coils, which are described as motifs involved in protein-protein interactions. It has also been suggested that the protein's coiled- coils allow it to dimerize in vivo.


:

Pssm-ID: 429647 [Multi-domain]  Cd Length: 74  Bit Score: 128.94  E-value: 2.58e-38
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30678573     8 WWWIGNHNTTNFSPWLHSTLSELDEKTKEMLRVIDEDADSFAARAEMYYKKRPELIAMVEEFYRSHRSLAERYD 81
Cdd:pfam07765   1 SWWWDSHIRPKQSKWLQENLSEMDEKVKAMLKLIEEDGDSFAKRAEMYYKKRPELINLVEEFYRSYRSLAERYD 74
 
Name Accession Description Interval E-value
KIP1 pfam07765
KIP1-like protein; This is a family of sequences found exclusively in plants. They are similar ...
 8-81 2.58e-38

KIP1-like protein; This is a family of sequences found exclusively in plants. They are similar to kinase interacting protein 1 (KIP1), which has been found to interact with the kinase domain of PRK1, a receptor-like kinase. This particular region contains two coiled-coils, which are described as motifs involved in protein-protein interactions. It has also been suggested that the protein's coiled- coils allow it to dimerize in vivo.


Pssm-ID: 429647 [Multi-domain]  Cd Length: 74  Bit Score: 128.94  E-value: 2.58e-38
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30678573     8 WWWIGNHNTTNFSPWLHSTLSELDEKTKEMLRVIDEDADSFAARAEMYYKKRPELIAMVEEFYRSHRSLAERYD 81
Cdd:pfam07765   1 SWWWDSHIRPKQSKWLQENLSEMDEKVKAMLKLIEEDGDSFAKRAEMYYKKRPELINLVEEFYRSYRSLAERYD 74
 
Name Accession Description Interval E-value
KIP1 pfam07765
KIP1-like protein; This is a family of sequences found exclusively in plants. They are similar ...
 8-81 2.58e-38

KIP1-like protein; This is a family of sequences found exclusively in plants. They are similar to kinase interacting protein 1 (KIP1), which has been found to interact with the kinase domain of PRK1, a receptor-like kinase. This particular region contains two coiled-coils, which are described as motifs involved in protein-protein interactions. It has also been suggested that the protein's coiled- coils allow it to dimerize in vivo.


Pssm-ID: 429647 [Multi-domain]  Cd Length: 74  Bit Score: 128.94  E-value: 2.58e-38
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30678573     8 WWWIGNHNTTNFSPWLHSTLSELDEKTKEMLRVIDEDADSFAARAEMYYKKRPELIAMVEEFYRSHRSLAERYD 81
Cdd:pfam07765   1 SWWWDSHIRPKQSKWLQENLSEMDEKVKAMLKLIEEDGDSFAKRAEMYYKKRPELINLVEEFYRSYRSLAERYD 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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