|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
93-293 |
5.79e-30 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 120.04 E-value: 5.79e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 93 IQQLNLQFNDieavtadSFINATHLKEINLSHNKIKSQKIDygvFAKLSNLQQLHLDHNNLEEFPFPLP--KSLERLLLG 170
Cdd:COG4886 98 LTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLPEE---LANLTNLKELDLSNNQLTDLPEPLGnlTNLKSLDLS 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 171 YNEISTLPThAMDGLVNVTMLDLCYNHLSDStlkGKILSKLEKLMQLNLCNNRLESMPPGLP--SSLMYLSLENNSISSI 248
Cdd:COG4886 168 NNQLTDLPE-ELGNLTNLKELDLSNNQITDL---PEPLGNLTNLEELDLSGNQLTDLPEPLAnlTNLETLDLSNNQLTDL 243
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 825706201 249 PEdyFQKLPKLHALRISHNKLEDIPyDIFNLSNLIELNVGHNKLK 293
Cdd:COG4886 244 PE--LGNLTNLEELDLSNNQLTDLP-PLANLTNLKTLDLSNNQLT 285
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
151-344 |
1.85e-23 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 101.55 E-value: 1.85e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 151 NNLEEFPFPLPKSLERLLLGYNEISTLPTHAMDGLVNVTMLDLCYNhlsdstlkgKILSKLEKLMQLNLCNNRLESMPPG 230
Cdd:COG4886 61 LLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN---------EELSNLTNLESLDLSGNQLTDLPEE 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 231 LPS--SLMYLSLENNSISSIPEDyFQKLPKLHALRISHNKLEDIPYDIFNLSNLIELNVGHNKLK---QAFYIPRNLEHL 305
Cdd:COG4886 132 LANltNLKELDLSNNQLTDLPEP-LGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITdlpEPLGNLTNLEEL 210
|
170 180 190
....*....|....*....|....*....|....*....
gi 825706201 306 YLQNNEIQSINvtmmcPSLDPLhhHHLTYLRVDQNKLKE 344
Cdd:COG4886 211 DLSGNQLTDLP-----EPLANL--TNLETLDLSNNQLTD 242
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
74-316 |
2.35e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.53 E-value: 2.35e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 74 TSMYCDNRKLKTIPD-IPM--HIQQLNLQFNDIEAVTAdSFINATHLKEINLSHNKIKSQKidyGVFAKLSNLQQLHLDH 150
Cdd:COG4886 139 KELDLSNNQLTDLPEpLGNltNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDLP---EPLGNLTNLEELDLSG 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 151 NNLEEFPFPLP--KSLERLLLGYNEISTLPthAMDGLVNVTMLDLCYNHLSDSTlkgkILSKLEKLMQLNLCNNR----- 223
Cdd:COG4886 215 NQLTDLPEPLAnlTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLP----PLANLTNLKTLDLSNNQltdlk 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 224 LESMPPGLPSSLMYLSLENNSISSIPEDYFQKLPKLHALRISHNKLEDIPYDIFNLSNLIELNVGHNKLKQAFYIPRNLE 303
Cdd:COG4886 289 LKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLT 368
|
250
....*....|...
gi 825706201 304 HLYLQNNEIQSIN 316
Cdd:COG4886 369 LGLLGLLEATLLT 381
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
68-302 |
4.60e-18 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 86.67 E-value: 4.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 68 CPTNFPTSMYCDNRKLKTIP-DIPMHIQQLNLQFNDIEAVTADSFINathLKEINLSHNKIKSqkidygVFAKLSN-LQQ 145
Cdd:PRK15370 175 CLKNNKTELRLKILGLTTIPaCIPEQITTLILDNNELKSLPENLQGN---IKTLYANSNQLTS------IPATLPDtIQE 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 146 LHLDHNNLEEFPFPLPKSLERLLLGYNEISTLPTHAMDGLvnvTMLDLCYNHLsdSTLKGKILSkleKLMQLNLCNNRLE 225
Cdd:PRK15370 246 MELSINRITELPERLPSALQSLDLFHNKISCLPENLPEEL---RYLSVYDNSI--RTLPAHLPS---GITHLNVQSNSLT 317
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 825706201 226 SMPPGLPSSLMYLSLENNSISSIPEDYfqkLPKLHALRISHNKLEDIPYDIfnLSNLIELNVGHNKLKQafyIPRNL 302
Cdd:PRK15370 318 ALPETLPPGLKTLEAGENALTSLPASL---PPELQVLDVSKNQITVLPETL--PPTITTLDVSRNALTN---LPENL 386
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
96-153 |
1.29e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 56.76 E-value: 1.29e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 825706201 96 LNLQFNDIEAVTADSFINATHLKEINLSHNKIKSqkIDYGVFAKLSNLQQLHLDHNNL 153
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
92-310 |
1.54e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 63.33 E-value: 1.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 92 HIQQLNLQFNDIEAVTADSFINATHLKEINLSHNKIkSQKIDYGVFAKLSNLQQLHLDHNNleeFPFPLPKS----LERL 167
Cdd:PLN00113 70 RVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQL-SGPIPDDIFTTSSSLRYLNLSNNN---FTGSIPRGsipnLETL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 168 LLGYNEISTLPTHAMDGLVNVTMLDLCYNhlsdsTLKGKI---LSKLEKLMQLNLCNNRLESMPP--------------- 229
Cdd:PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGN-----VLVGKIpnsLTNLTSLEFLTLASNQLVGQIPrelgqmkslkwiylg 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 230 ------GLP------SSLMYLSL-ENNSISSIPEDyFQKLPKLHALRISHNKLED-IPYDIFNLSNLIELNVGHNKLKQA 295
Cdd:PLN00113 221 ynnlsgEIPyeigglTSLNHLDLvYNNLTGPIPSS-LGNLKNLQYLFLYQNKLSGpIPPSIFSLQKLISLDLSDNSLSGE 299
|
250 260
....*....|....*....|.
gi 825706201 296 fyIP------RNLEHLYLQNN 310
Cdd:PLN00113 300 --IPelviqlQNLEILHLFSN 318
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
83-323 |
1.03e-09 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 60.56 E-value: 1.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 83 LKTIPD-IPMHIQQLNLQFNDIEAVTAdsfiNATHLKEINLSHNKIKSQKIdygvfaKLSNLQQLHLDHNNLEEFPfPLP 161
Cdd:PRK15387 213 LTTLPDcLPAHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPV------LPPGLLELSIFSNPLTHLP-ALP 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 162 KSLERLLLGYNEISTLPTHAmDGLVNVTMLDlcyNHLSdstlkgKILSKLEKLMQLNLCNNRLESMPPgLPSSLMYLSLE 241
Cdd:PRK15387 282 SGLCKLWIFGNQLTSLPVLP-PGLQELSVSD---NQLA------SLPALPSELCKLWAYNNQLTSLPT-LPSGLQELSVS 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 242 NNSISSIPedyfqKLP-KLHALRISHNKLEDIPYdifNLSNLIELNVGHNKLKQAFYIPRNLEHLYLQNNEIQSINvtmM 320
Cdd:PRK15387 351 DNQLASLP-----TLPsELYKLWAYNNRLTSLPA---LPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLP---M 419
|
...
gi 825706201 321 CPS 323
Cdd:PRK15387 420 LPS 422
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
92-292 |
1.19e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 60.63 E-value: 1.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 92 HIQQLNLQFNDIEAVTADSFINATHLKEINLSHNKIkSQKIDYGvFAKLSNLQQLHLDHNNL----EEFPFPLPkSLERL 167
Cdd:PLN00113 381 NLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSF-SGELPSE-FTKLPLVYFLDISNNNLqgriNSRKWDMP-SLQML 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 168 LLGYNEIS-TLPTHAmdGLVNVTMLDLCYNHLSDSTLKGkiLSKLEKLMQLNLCNNRLESMPPGLPSS---LMYLSLENN 243
Cdd:PLN00113 458 SLARNKFFgGLPDSF--GSKRLENLDLSRNQFSGAVPRK--LGSLSELMQLKLSENKLSGEIPDELSSckkLVSLDLSHN 533
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 825706201 244 SISSIPEDYFQKLPKLHALRISHNKLE-DIPYDIFNLSNLIELNVGHNKL 292
Cdd:PLN00113 534 QLSGQIPASFSEMPVLSQLDLSQNQLSgEIPKNLGNVESLVQVNISHNHL 583
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
141-319 |
3.81e-09 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 58.55 E-value: 3.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 141 SNLQQLHLDHNNLEEFPFPLPKSLERLLLGYNEISTLPthamdglvnvtmldlcynhlsdSTLKGKIlskleklMQLNLC 220
Cdd:PRK15370 178 NNKTELRLKILGLTTIPACIPEQITTLILDNNELKSLP----------------------ENLQGNI-------KTLYAN 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 221 NNRLESMPPGLPSSLMYLSLENNSISSIPEdyfqKLPK-LHALRISHNKLEDIPYDIFNlsNLIELNVGHNKLKQ-AFYI 298
Cdd:PRK15370 229 SNQLTSIPATLPDTIQEMELSINRITELPE----RLPSaLQSLDLFHNKISCLPENLPE--ELRYLSVYDNSIRTlPAHL 302
|
170 180
....*....|....*....|.
gi 825706201 299 PRNLEHLYLQNNEIQSINVTM 319
Cdd:PRK15370 303 PSGITHLNVQSNSLTALPETL 323
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
141-198 |
2.42e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.22 E-value: 2.42e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 825706201 141 SNLQQLHLDHNNLEEFP---FPLPKSLERLLLGYNEISTLPTHAMDGLVNVTMLDLCYNHL 198
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDdgaFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
233-292 |
3.80e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.83 E-value: 3.80e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 825706201 233 SSLMYLSLENNSISSIPEDYFQKLPKLHALRISHNKLEDI-PYDIFNLSNLIELNVGHNKL 292
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
138-302 |
1.69e-07 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 53.70 E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 138 AKLSNLQQLHLDHNNLE-EFPFPLP--KSLERLLLGYNEISTLPTHAMDGLVNVTMLDLCYNHLSdstlkGKI---LSKL 211
Cdd:PLN00113 185 TNLTSLEFLTLASNQLVgQIPRELGqmKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLT-----GPIpssLGNL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 212 EKLMQLNLCNNRLE-SMPPGLPS--SLMYLSLENNSIS-SIPEDYFQkLPKLHALRISHNKLE-DIPYDIFNLSNLIELN 286
Cdd:PLN00113 260 KNLQYLFLYQNKLSgPIPPSIFSlqKLISLDLSDNSLSgEIPELVIQ-LQNLEILHLFSNNFTgKIPVALTSLPRLQVLQ 338
|
170
....*....|....*.
gi 825706201 287 VGHNKLKQAfyIPRNL 302
Cdd:PLN00113 339 LWSNKFSGE--IPKNL 352
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
136-342 |
5.11e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 51.20 E-value: 5.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 136 VFAKLSNLQQLHLDHNNL--EEFPF-----PLPKSLERLLLGYNEISTLPT------HAMDGLVNVTMLDLCYNHLSDST 202
Cdd:cd00116 18 LLPKLLCLQVLRLEGNTLgeEAAKAlasalRPQPSLKELCLSLNETGRIPRglqsllQGLTKGCGLQELDLSDNALGPDG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 203 LKG-KILSKLEKLMQLNLCNNRLESMP--------PGLPSSLMYLSLENNSISSIP----EDYFQKLPKLHALRISHNKL 269
Cdd:cd00116 98 CGVlESLLRSSSLQELKLNNNGLGDRGlrllakglKDLPPALEKLVLGRNRLEGAScealAKALRANRDLKELNLANNGI 177
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 825706201 270 EDipydifnlsnlielnVGHNKLKQAFYIPRNLEHLYLQNNEIQSINVTMMCPSLdpLHHHHLTYLRVDQNKL 342
Cdd:cd00116 178 GD---------------AGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETL--ASLKSLEVLNLGDNNL 233
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
89-312 |
5.36e-07 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 52.16 E-value: 5.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 89 IPMHIQQL-NLQF-----NDIEAVTADSFINATHLKEINLSHNKIKSQKIDygVFAKLSNLQQLHLDHNNLE-EFPF--- 158
Cdd:PLN00113 252 IPSSLGNLkNLQYlflyqNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE--LVIQLQNLEILHLFSNNFTgKIPValt 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 159 PLPKsLERLLLGYNEISTLPTHAMDGLVNVTMLDLCYNHLSdstlkGKI---LSKLEKLMQLNLCNNRLES-MPPGLP-- 232
Cdd:PLN00113 330 SLPR-LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT-----GEIpegLCSSGNLFKLILFSNSLEGeIPKSLGac 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 233 SSLMYLSLENNSISSIPEDYFQKLPKLHALRISHNKLE-DIPYDIFNLSNLIELNVGHNK----LKQAFYiPRNLEHLYL 307
Cdd:PLN00113 404 RSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQgRINSRKWDMPSLQMLSLARNKffggLPDSFG-SKRLENLDL 482
|
....*
gi 825706201 308 QNNEI 312
Cdd:PLN00113 483 SRNQF 487
|
|
| LRRNT |
smart00013 |
Leucine rich repeat N-terminal domain; |
61-94 |
1.07e-06 |
|
Leucine rich repeat N-terminal domain;
Pssm-ID: 214470 [Multi-domain] Cd Length: 33 Bit Score: 45.00 E-value: 1.07e-06
10 20 30
....*....|....*....|....*....|....*
gi 825706201 61 GCAKECFCPtnfPTSMYCDNRKLKTIP-DIPMHIQ 94
Cdd:smart00013 1 ACPAPCNCS---GTAVDCSGRGLTEVPlDLPPDTT 32
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
96-316 |
3.17e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 47.86 E-value: 3.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 96 LNLQFNDIEAVtaDSFINATHLKEINLSHNKIksQKIDygVFAKLSNLQQLHLDHNNLEEFPF--PLPKsLERLLLGYNE 173
Cdd:cd21340 7 LYLNDKNITKI--DNLSLCKNLKVLYLYDNKI--TKIE--NLEFLTNLTHLYLQNNQIEKIENleNLVN-LKKLYLGGNR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 174 ISTLpthamdglvnvtmldlcynhlsdstlKGkiLSKLEKLMQLNLCNNRLesmPPGLPsslmyLSLENNSISSIpedyf 253
Cdd:cd21340 80 ISVV--------------------------EG--LENLTNLEELHIENQRL---PPGEK-----LTFDPRSLAAL----- 118
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 825706201 254 qkLPKLHALRISHNKLEDIpYDIFNLsnlielnvghnklkqafyipRNLEHLYLQNNEIQSIN 316
Cdd:cd21340 119 --SNSLRVLNISGNNIDSL-EPLAPL--------------------RNLEQLDASNNQISDLE 158
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
117-250 |
1.63e-05 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 47.08 E-value: 1.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 117 LKEINLSHNKIKSqkidygVFAKLSNLQQLHLDHNNLEEFPfPLPKSLERLLLGYNEISTLPT-----HAMDGLVN-VTM 190
Cdd:PRK15387 304 LQELSVSDNQLAS------LPALPSELCKLWAYNNQLTSLP-TLPSGLQELSVSDNQLASLPTlpselYKLWAYNNrLTS 376
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 825706201 191 LDLCYNHLSDSTLKGKILSKL----EKLMQLNLCNNRLESMPPgLPSSLMYLSLENNSISSIPE 250
Cdd:PRK15387 377 LPALPSGLKELIVSGNRLTSLpvlpSELKELMVSGNRLTSLPM-LPSGLLSLSVYRNQLTRLPE 439
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
142-302 |
2.56e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 46.76 E-value: 2.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 142 NLQQLHLDHNNLE-EFPFPLP--KSLERLLLGYNEISTLPTHAMDGLVNVTMLDLcynhlSDSTLKGKI----------- 207
Cdd:PLN00113 381 NLFKLILFSNSLEgEIPKSLGacRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDI-----SNNNLQGRInsrkwdmpslq 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 208 ---------------LSKLEKLMQLNLCNNRLESMPP---GLPSSLMYLSLENNSISSIPEDYFQKLPKLHALRISHNKL 269
Cdd:PLN00113 456 mlslarnkffgglpdSFGSKRLENLDLSRNQFSGAVPrklGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535
|
170 180 190
....*....|....*....|....*....|....
gi 825706201 270 E-DIPYDIFNLSNLIELNVGHNKLKQAfyIPRNL 302
Cdd:PLN00113 536 SgQIPASFSEMPVLSQLDLSQNQLSGE--IPKNL 567
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
92-361 |
2.62e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 46.32 E-value: 2.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 92 HIQQLNLQFNDIEAVTADSFINA----THLKEINLSHNKIKSQKIdYGVFAKLSNLQQLH-LD-HNN------LEEFPFP 159
Cdd:COG5238 181 SVETVYLGCNQIGDEGIEELAEAltqnTTVTTLWLKRNPIGDEGA-EILAEALKGNKSLTtLDlSNNqigdegVIALAEA 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 160 L--PKSLERLLLGYNEIS-----TLPTHaMDGLVNVTMLDLCYNHLSDSTLKGkILSKLEKlmqlnlcNNRLESMppglp 232
Cdd:COG5238 260 LknNTTVETLYLSGNQIGaegaiALAKA-LQGNTTLTSLDLSVNRIGDEGAIA-LAEGLQG-------NKTLHTL----- 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 233 sSLMYLSLENNSISSIPEdYFQKLPKLHALRISHNKLEDIPYD-----IFNLSNLIELNVGHNKLKqafyiprNLEHLYL 307
Cdd:COG5238 326 -NLAYNGIGAQGAIALAK-ALQENTTLHSLDLSDNQIGDEGAIalakyLEGNTTLRELNLGKNNIG-------KQGAEAL 396
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 825706201 308 qnneiqsinvtmmcpsLDPLHHHHLTYLRVDQNKLKEPISSYIFFCFPRIHSIY 361
Cdd:COG5238 397 ----------------IDALQTNRLHTLILDGNLIGAEAQQRLEQLLERIKSVY 434
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
163-224 |
5.61e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.59 E-value: 5.61e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 825706201 163 SLERLLLGYNEISTLPTHAMDGLVNVTMLDLCYNHLsdSTLKGKILSKLEKLMQLNLCNNRL 224
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL--TTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
187-245 |
5.72e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.59 E-value: 5.72e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 825706201 187 NVTMLDLCYNHLSDstLKGKILSKLEKLMQLNLCNNRLESMPP----GLPsSLMYLSLENNSI 245
Cdd:pfam13855 2 NLRSLDLSNNRLTS--LDDGAFKGLSNLKVLDLSNNLLTTLSPgafsGLP-SLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
93-246 |
1.63e-04 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 44.07 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 93 IQQLNLQFNDIEAVTADSFINATHLKEINLSHNKIKSQKIDYgvFAKLSNLQQLHLDHNNLE-EFPfplpkslerllLGY 171
Cdd:PLN00113 477 LENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDE--LSSCKKLVSLDLSHNQLSgQIP-----------ASF 543
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 825706201 172 NEISTLpthamdglvnvTMLDLCYNHLSdstlkGKI---LSKLEKLMQLNLCNNRLESmppGLPSSLMYLSLENNSIS 246
Cdd:PLN00113 544 SEMPVL-----------SQLDLSQNQLS-----GEIpknLGNVESLVQVNISHNHLHG---SLPSTGAFLAINASAVA 602
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
217-342 |
1.64e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 44.00 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 217 LNLCNNRLESMPPGLPSSLMYLSLENNSISSIPedyfQKLPKLHALRISHNKLEDIPydiFNLSNLIELNVGHNKLKQAF 296
Cdd:PRK15387 206 LNVGESGLTTLPDCLPAHITTLVIPDNNLTSLP----ALPPELRTLEVSGNQLTSLP---VLPPGLLELSIFSNPLTHLP 278
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 825706201 297 YIPRNLEHLYLQNNEIQSInvtmmcPSLDPlhhhHLTYLRVDQNKL 342
Cdd:PRK15387 279 ALPSGLCKLWIFGNQLTSL------PVLPP----GLQELSVSDNQL 314
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
211-315 |
3.01e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 42.08 E-value: 3.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 211 LEKLMQLNLCNNRLESMP-PGLPSSLMYLSLENNSISSIPEdyFQKLPKLHALRISHNKLEDIPydifNLSNLielnvgh 289
Cdd:cd21340 1 LKRITHLYLNDKNITKIDnLSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIE----NLENL------- 67
|
90 100
....*....|....*....|....*.
gi 825706201 290 nklkqafyipRNLEHLYLQNNEIQSI 315
Cdd:cd21340 68 ----------VNLKKLYLGGNRISVV 83
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
115-153 |
1.41e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 36.45 E-value: 1.41e-03
10 20 30
....*....|....*....|....*....|....*....
gi 825706201 115 THLKEINLSHNKIKsqkiDYGVFAKLSNLQQLHLDHNNL 153
Cdd:pfam12799 1 PNLEVLDLSNNQIT----DIPPLAKLPNLETLDLSGNNK 35
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
79-220 |
3.29e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 39.80 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 79 DNRKLK-TIP-DIPM--HIQQLNLQFNDIEAVTADSFINATHLKEINLSHNKIKSQKIDygVFAKLSNLQQLHLDHNNLE 154
Cdd:PLN03150 426 DNQGLRgFIPnDISKlrHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE--SLGQLTSLRILNLNGNSLS 503
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 825706201 155 EfpfPLPKSLERLLLgYNEISTLPTHAmdGLVNVTMLDLCYNHLSDSTLKGKILSKLEKLMQLNLC 220
Cdd:PLN03150 504 G---RVPAALGGRLL-HRASFNFTDNA--GLCGIPGLRACGPHLSVGAKIGIAFGVSVAFLFLVIC 563
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
198-264 |
3.72e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 39.41 E-value: 3.72e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 825706201 198 LSDSTLKGKI---LSKLEKLMQLNLCNNRLE-SMPPGLPS--SLMYLSLENNSIS-SIPEdyfqKLPKLHALRI 264
Cdd:PLN03150 425 LDNQGLRGFIpndISKLRHLQSINLSGNSIRgNIPPSLGSitSLEVLDLSYNSFNgSIPE----SLGQLTSLRI 494
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
238-328 |
4.01e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 38.61 E-value: 4.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 825706201 238 LSLENNSISSIPEdyFQKLPKLHALRISHNKLEDIPydifNLSNLielnvghnklkqafyipRNLEHLYLQNNEIQSINV 317
Cdd:cd21340 7 LYLNDKNITKIDN--LSLCKNLKVLYLYDNKITKIE----NLEFL-----------------TNLTHLYLQNNQIEKIEN 63
|
90
....*....|.
gi 825706201 318 TMMCPSLDPLH 328
Cdd:cd21340 64 LENLVNLKKLY 74
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
280-342 |
6.77e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 34.81 E-value: 6.77e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 825706201 280 SNLIELNVGHNKL----KQAFYIPRNLEHLYLQNNEIQSINVTmmcpSLDPLhhHHLTYLRVDQNKL 342
Cdd:pfam13855 1 PNLRSLDLSNNRLtsldDGAFKGLSNLKVLDLSNNLLTTLSPG----AFSGL--PSLRYLDLSGNRL 61
|
|
|