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Conserved domains on  [gi|148222456|ref|NP_084268|]
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trichoplein keratin filament-binding protein [Mus musculus]

Protein Classification

trichohyalin-plectin-homology domain domain-containing protein( domain architecture ID 12159040)

trichohyalin-plectin-homology domain (TPH) domain-containing protein similar to meiosis-specific nuclear structural protein 1, trichoplein keratin filament-binding protein, and cilia- and flagella-associated proteins

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TPH pfam13868
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ...
 145-479 7.60e-23

Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.


:

Pssm-ID: 464007 [Multi-domain]  Cd Length: 341  Bit Score: 99.22  E-value: 7.60e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  145 NNPKLRELELDLHKKHVINSWATQKEEKKQQEATEKQENKRLENQYAAARREAEARMRVEEERRQLEGRLQAEALRQQME 224
Cdd:pfam13868   4 NSDELRELNSKLLAAKCNKERDAQIAEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEEQIE 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  225 ELKQKEMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEVDGRILQALLE 304
Cdd:pfam13868  84 EREQKRQEEYEEKLQEREQMDEIVERIQEEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEDERILEYLKE 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  305 KEGELQQVELARREQARADAAWMKQVIEEQLQLEKAREAE---LQQLLREEAKEMWEKREAEWAREQVARDRLMSEvltG 381
Cdd:pfam13868 164 KAEREEEREAEREEIEEEKEREIARLRAQQEKAQDEKAERdelRAKLYQEEQERKERQKEREEAEKKARQRQELQQ---A 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  382 RQQQILEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLARKQELEAQVAERQGQEWEAARQEEEEEEEA 461
Cdd:pfam13868 241 REEQIELKERRLAEEAEREEEEFERMLRKQAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERL 320

                         330
                  ....*....|....*...
gi 148222456  462 RQAEEHSNALLQQEAKTM 479
Cdd:pfam13868 321 REEEAERRERIEEERQKK 338
 
Name Accession Description Interval E-value
TPH pfam13868
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ...
 145-479 7.60e-23

Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.


Pssm-ID: 464007 [Multi-domain]  Cd Length: 341  Bit Score: 99.22  E-value: 7.60e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  145 NNPKLRELELDLHKKHVINSWATQKEEKKQQEATEKQENKRLENQYAAARREAEARMRVEEERRQLEGRLQAEALRQQME 224
Cdd:pfam13868   4 NSDELRELNSKLLAAKCNKERDAQIAEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEEQIE 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  225 ELKQKEMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEVDGRILQALLE 304
Cdd:pfam13868  84 EREQKRQEEYEEKLQEREQMDEIVERIQEEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEDERILEYLKE 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  305 KEGELQQVELARREQARADAAWMKQVIEEQLQLEKAREAE---LQQLLREEAKEMWEKREAEWAREQVARDRLMSEvltG 381
Cdd:pfam13868 164 KAEREEEREAEREEIEEEKEREIARLRAQQEKAQDEKAERdelRAKLYQEEQERKERQKEREEAEKKARQRQELQQ---A 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  382 RQQQILEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLARKQELEAQVAERQGQEWEAARQEEEEEEEA 461
Cdd:pfam13868 241 REEQIELKERRLAEEAEREEEEFERMLRKQAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERL 320

                         330
                  ....*....|....*...
gi 148222456  462 RQAEEHSNALLQQEAKTM 479
Cdd:pfam13868 321 REEEAERRERIEEERQKK 338
PTZ00121 PTZ00121
MAEBL; Provisional
 111-487 2.33e-12

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 69.78  E-value: 2.33e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  111 REQRLREQHQDLKSAREEQRKLIAERLLYEHWKKNNPKLRELElDLHKKhvinswatQKEEKKQQEATEKQENKRlenQY 190
Cdd:PTZ00121 1392 KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD-EAKKK--------AEEAKKADEAKKKAEEAK---KA 1459

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  191 AAARREAEARMRVEEERRQLEGRLQAEALRQQMEELKQKEMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELG 270
Cdd:PTZ00121 1460 EEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEA 1539

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  271 RFLKHQYNAQLNRRTQEIQ--------EELEVDGRILQALLEKEGELQQVELARREQARADAAWMKQVIEEQLQLEKARE 342
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKkaeekkkaEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  343 AELQQLLREE----------AKEMWEKREAEWAREQVARDRLMSEVLTGRQQQILEKIEQNRRAQEETLKHREKLIRSLE 412
Cdd:PTZ00121 1620 IKAEELKKAEeekkkveqlkKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE 1699

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 148222456  413 EGKQLAQRAKEESEELKLARKQELEAQVAERQGQEWEAARQEEEEEEEARQAEEHSNALLQQEAKTMAEKGYQPK 487
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIR 1774
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 148-448 3.41e-10

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 62.65  E-value: 3.41e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 148 KLRELELDLHKKHVINS-WATQKEEKKQQEATEKQENKRLENQYAAARREAEARMRVEEERRQLEGRLQaEALRQQMEEL 226
Cdd:COG1196  223 KELEAELLLLKLRELEAeLEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEY-ELLAELARLE 301

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 227 KQKEMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEVDGRILQALLEKE 306
Cdd:COG1196  302 QDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL 381

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 307 GELQQVELARREQARADAAWMKQVIEEQLQLEKAREAELQQLLREEAKEMWEKREAEWAREQVARDRLMSEVLTGRQQQI 386
Cdd:COG1196  382 EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148222456 387 LEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLARKQELEAQVAERQGQEW 448
Cdd:COG1196  462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLA 523
SMC_prok_B TIGR02168
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
 219-442 1.26e-04

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 44.66  E-value: 1.26e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456   219 LRQQMEELKQK----EMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEV 294
Cdd:TIGR02168  682 LEEKIEELEEKiaelEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA 761

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456   295 DGRILQALLEKEGELQQVELARREQARADAawmkQVIEEQLQLEKAREAELQQLLREEAKEMWEKRE-AEWAREQVARDR 373
Cdd:TIGR02168  762 EIEELEERLEEAEEELAEAEAEIEELEAQI----EQLKEELKALREALDELRAELTLLNEEAANLRErLESLERRIAATE 837

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 148222456   374 LMSEVLTGRQQQILEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLaRKQELEAQVAE 442
Cdd:TIGR02168  838 RRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRS-ELEELSEELRE 905
 
Name Accession Description Interval E-value
TPH pfam13868
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ...
 145-479 7.60e-23

Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.


Pssm-ID: 464007 [Multi-domain]  Cd Length: 341  Bit Score: 99.22  E-value: 7.60e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  145 NNPKLRELELDLHKKHVINSWATQKEEKKQQEATEKQENKRLENQYAAARREAEARMRVEEERRQLEGRLQAEALRQQME 224
Cdd:pfam13868   4 NSDELRELNSKLLAAKCNKERDAQIAEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEEQIE 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  225 ELKQKEMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEVDGRILQALLE 304
Cdd:pfam13868  84 EREQKRQEEYEEKLQEREQMDEIVERIQEEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEDERILEYLKE 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  305 KEGELQQVELARREQARADAAWMKQVIEEQLQLEKAREAE---LQQLLREEAKEMWEKREAEWAREQVARDRLMSEvltG 381
Cdd:pfam13868 164 KAEREEEREAEREEIEEEKEREIARLRAQQEKAQDEKAERdelRAKLYQEEQERKERQKEREEAEKKARQRQELQQ---A 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  382 RQQQILEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLARKQELEAQVAERQGQEWEAARQEEEEEEEA 461
Cdd:pfam13868 241 REEQIELKERRLAEEAEREEEEFERMLRKQAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERL 320

                         330
                  ....*....|....*...
gi 148222456  462 RQAEEHSNALLQQEAKTM 479
Cdd:pfam13868 321 REEEAERRERIEEERQKK 338
PTZ00121 PTZ00121
MAEBL; Provisional
 111-487 2.33e-12

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 69.78  E-value: 2.33e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  111 REQRLREQHQDLKSAREEQRKLIAERLLYEHWKKNNPKLRELElDLHKKhvinswatQKEEKKQQEATEKQENKRlenQY 190
Cdd:PTZ00121 1392 KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD-EAKKK--------AEEAKKADEAKKKAEEAK---KA 1459

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  191 AAARREAEARMRVEEERRQLEGRLQAEALRQQMEELKQKEMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELG 270
Cdd:PTZ00121 1460 EEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEA 1539

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  271 RFLKHQYNAQLNRRTQEIQ--------EELEVDGRILQALLEKEGELQQVELARREQARADAAWMKQVIEEQLQLEKARE 342
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKkaeekkkaEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  343 AELQQLLREE----------AKEMWEKREAEWAREQVARDRLMSEVLTGRQQQILEKIEQNRRAQEETLKHREKLIRSLE 412
Cdd:PTZ00121 1620 IKAEELKKAEeekkkveqlkKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE 1699

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 148222456  413 EGKQLAQRAKEESEELKLARKQELEAQVAERQGQEWEAARQEEEEEEEARQAEEHSNALLQQEAKTMAEKGYQPK 487
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIR 1774
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 148-448 3.41e-10

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 62.65  E-value: 3.41e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 148 KLRELELDLHKKHVINS-WATQKEEKKQQEATEKQENKRLENQYAAARREAEARMRVEEERRQLEGRLQaEALRQQMEEL 226
Cdd:COG1196  223 KELEAELLLLKLRELEAeLEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEY-ELLAELARLE 301

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 227 KQKEMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEVDGRILQALLEKE 306
Cdd:COG1196  302 QDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL 381

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 307 GELQQVELARREQARADAAWMKQVIEEQLQLEKAREAELQQLLREEAKEMWEKREAEWAREQVARDRLMSEVLTGRQQQI 386
Cdd:COG1196  382 EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 148222456 387 LEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLARKQELEAQVAERQGQEW 448
Cdd:COG1196  462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLA 523
PTZ00121 PTZ00121
MAEBL; Provisional
 69-487 9.75e-10

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 61.31  E-value: 9.75e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456   69 EKMKEEKRKILELRRERLRELLLEEQDLLAAELDELRLSMGLREQRLREQHQDLKSAREEQRKLIAERLLYEHWKKNNPK 148
Cdd:PTZ00121 1370 EKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA 1449

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  149 LRELEldlHKKHVINSWATQKEEKKQQEATEKQENKRLENQYAAARREAEArmRVEEERRQLEGRLQAEALRQQMEELKQ 228
Cdd:PTZ00121 1450 KKKAE---EAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKK--KADEAKKAAEAKKKADEAKKAEEAKKA 1524

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  229 KEMEATKLKKEQENLLR---QRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLnRRTQEIQEELEVDGRILQALLEK 305
Cdd:PTZ00121 1525 DEAKKAEEAKKADEAKKaeeKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMAL-RKAEEAKKAEEARIEEVMKLYEE 1603

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  306 EGELQQVELARREQARADAAWMKQVIEEQLQLEKAREAELQQLLREE----AKEMWEKREAEWAREQvARDRLMSEVLTG 381
Cdd:PTZ00121 1604 EKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEelkkAEEENKIKAAEEAKKA-EEDKKKAEEAKK 1682

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  382 RQQQILEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLARKQELEAQVAERQGQEWEAARQEEEEEEEA 461
Cdd:PTZ00121 1683 AEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHL 1762

                         410       420
                  ....*....|....*....|....*.
gi 148222456  462 RQAEEHSNALLQQEAKTMAEKGYQPK 487
Cdd:PTZ00121 1763 KKEEEKKAEEIRKEKEAVIEEELDEE 1788
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 72-444 3.92e-09

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 59.18  E-value: 3.92e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  72 KEEKRKILELRRERLRELLLEEQDLLAAELDELRLSMGLREQRLREQHQDLKSAREEQRKLIAERllyEHWKKNNPKLRE 151
Cdd:COG1196  240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDI---ARLEERRRELEE 316

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 152 LELDLHKKHVINSWATQKEEKKQQEATEKQENKRLENQYAAARREAEARMRVEEERRQLEGRLQAEALRQQMEELKQKEM 231
Cdd:COG1196  317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 232 EATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEVDGRILQALLEKEGELQQ 311
Cdd:COG1196  397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 312 VELARREQARADAAWMKQVIEEQLQLEKAREAELQQLLREEAKEMWEKREAEWAREQVARDRLMSEVLTGRQQQILEKIE 391
Cdd:COG1196  477 AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDD 556

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 148222456 392 QNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLARKQELEAQVAERQ 444
Cdd:COG1196  557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLR 609
PTZ00121 PTZ00121
MAEBL; Provisional
 102-444 5.46e-08

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 55.92  E-value: 5.46e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  102 DELRLSMGLREQRLREQHQDLKSAREEQRKLIAERLLYEHWKKNNPKLRELELDLHKKHVINSWATQKEEKKQQEATEKQ 181
Cdd:PTZ00121 1287 EEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKA 1366

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  182 ENKRLENQyAAARREAEARMRVEEERRQLEGRLQAEALRQQMEELKQKEME----------------ATKLKKEQENLLR 245
Cdd:PTZ00121 1367 EAAEKKKE-EAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAkkkadeakkkaeekkkADEAKKKAEEAKK 1445

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  246 QRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEVDGRILQALLEKEGELQQVELARR--EQARAD 323
Cdd:PTZ00121 1446 ADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKaeEAKKAD 1525

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  324 AAWMKQVIEEQLQLEKAREAELQQLLR--EEAKEMWEKREAEWAREQVARDRL---------------MSEVLTGRQQQI 386
Cdd:PTZ00121 1526 EAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKKAEEAKKAEEDKNMalrkaeeakkaeearIEEVMKLYEEEK 1605

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 148222456  387 LEKIEQNRRAQEETLKhREKLIRSLEEGKQLAQRAKEESEELKLA---RKQELEAQVAERQ 444
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIK-AEELKKAEEEKKKVEQLKKKEAEEKKKAeelKKAEEENKIKAAE 1665
PTZ00121 PTZ00121
MAEBL; Provisional
 143-482 1.71e-06

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 50.91  E-value: 1.71e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  143 KKNNPKLRELELDLHKKHVINSwaTQKEEKKQQEATEKQENKRLENQyaaarREAEARMRVEEERRQLEGRLQAEALRQQ 222
Cdd:PTZ00121 1070 EGLKPSYKDFDFDAKEDNRADE--ATEEAFGKAEEAKKTETGKAEEA-----RKAEEAKKKAEDARKAEEARKAEDARKA 1142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  223 MEELKQKEMEATKLKKEQENLLRQRWELERLEEERRQMAalrRKTELGRFLKHQYNAQLNRRTQEIQEELEVdgrilqal 302
Cdd:PTZ00121 1143 EEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAA---RKAEEVRKAEELRKAEDARKAEAARKAEEE-------- 1211

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  303 lEKEGELQQVELARREQARADAAWMKQVIEEQLQLEKAREAELQQLLREEAKEMWEKREAEWAREQVARDRLMSEVLTGR 382
Cdd:PTZ00121 1212 -RKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKK 1290

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  383 QQQILEKIEQNRRAQEETLKHREKliRSLEEGKQLAQRAKEESEEL-KLARKQELEAQVAERQGQEWEAARQEEEEEEEA 461
Cdd:PTZ00121 1291 KADEAKKAEEKKKADEAKKKAEEA--KKADEAKKKAEEAKKKADAAkKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA 1368

                         330       340
                  ....*....|....*....|.
gi 148222456  462 RQAEEHSNALLQQEAKTMAEK 482
Cdd:PTZ00121 1369 AEKKKEEAKKKADAAKKKAEE 1389
PTZ00121 PTZ00121
MAEBL; Provisional
 169-461 6.33e-06

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 48.98  E-value: 6.33e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  169 KEEKKQQEATEKQENKRLENQYAAARREAEARMRVEEERRQLEGRLQAEALRQQMEELKQKEMEATKLKKEQENLLR--- 245
Cdd:PTZ00121 1137 EDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKaee 1216

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  246 -QRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEVDGRILQALLE--KEGELQQVELARREQARA 322
Cdd:PTZ00121 1217 aRKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEarKADELKKAEEKKKADEAK 1296

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  323 DAAWMKQVIEEQLQLEKAREAELQQLLREEAKEMWE--KREAEWAREQVARDRLMSEVLTGRQQQILEKIEQNRRAQEET 400
Cdd:PTZ00121 1297 KAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADaaKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA 1376

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 148222456  401 LKHREKL------IRSLEEGKQLAQRAKEESEELKLARKQELEAQVAERQGQEWEAARQEEEEEEEA 461
Cdd:PTZ00121 1377 KKKADAAkkkaeeKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEA 1443
PTZ00121 PTZ00121
MAEBL; Provisional
 69-415 1.14e-05

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 48.21  E-value: 1.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456   69 EKMKEEKRKILELRRERLRELLLEEQDLLAAELDELRLSMGLREQRLREQHQDLKSAREEQRKLIAERLLYEHWKKNNPK 148
Cdd:PTZ00121 1442 EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEA 1521

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  149 LRELELDLHKKHVINSWATQKEEKKQQEATEK-------------QENKRLENQYAAARREAEARMRVEEERRQLEGRLQ 215
Cdd:PTZ00121 1522 KKADEAKKAEEAKKADEAKKAEEKKKADELKKaeelkkaeekkkaEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLY 1601

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  216 AEALRQQMEELKQKEME---ATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQL---NRRTQEIQ 289
Cdd:PTZ00121 1602 EEEKKMKAEEAKKAEEAkikAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAeedKKKAEEAK 1681

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  290 EELEVDGRILQALLEKEGELQQVELARREQARAdaawmKQVIEEQLQLEKAREAELQQLLREEAKEmweKREAEWAREQV 369
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAKKAEELKKKEAEE-----KKKAEELKKAEEENKIKAEEAKKEAEED---KKKAEEAKKDE 1753

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 148222456  370 ARDRLMSEVLTGRQQQILEKIEQNRRAQEETLKHREKLIRSLEEGK 415
Cdd:PTZ00121 1754 EEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKK 1799
SMC_prok_B TIGR02168
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
 219-442 1.26e-04

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 44.66  E-value: 1.26e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456   219 LRQQMEELKQK----EMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEV 294
Cdd:TIGR02168  682 LEEKIEELEEKiaelEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA 761

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456   295 DGRILQALLEKEGELQQVELARREQARADAawmkQVIEEQLQLEKAREAELQQLLREEAKEMWEKRE-AEWAREQVARDR 373
Cdd:TIGR02168  762 EIEELEERLEEAEEELAEAEAEIEELEAQI----EQLKEELKALREALDELRAELTLLNEEAANLRErLESLERRIAATE 837

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 148222456   374 LMSEVLTGRQQQILEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLaRKQELEAQVAE 442
Cdd:TIGR02168  838 RRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRS-ELEELSEELRE 905
SMC_prok_B TIGR02168
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
 202-474 2.97e-04

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 43.51  E-value: 2.97e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456   202 RVEEERRQLEGRLQAEALRQQMEELKQKEMEATKLKKEQENLLRQ-RWELERLEEERRQMAALRRKTELGRFLKHQYNAQ 280
Cdd:TIGR02168  217 ELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAElQELEEKLEELRLEVSELEEEIEELQKELYALANE 296

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456   281 LNRRTQEIQEELEVDGRILQALLEKEGELQQVElARREQARADAAWMKQVIEEQLQLEKAREAELqqllrEEAKEMWEKR 360
Cdd:TIGR02168  297 ISRLEQQKQILRERLANLERQLEELEAQLEELE-SKLDELAEELAELEEKLEELKEELESLEAEL-----EELEAELEEL 370

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456   361 EAEWAREQVARDRLMSEV--LTGRQQQILEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEELKLARKQELEA 438
Cdd:TIGR02168  371 ESRLEELEEQLETLRSKVaqLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELE 450

                          250       260       270
                   ....*....|....*....|....*....|....*.
gi 148222456   439 QVAERQGQEWEAARQEEEEEEEARQAEEHSNALLQQ 474
Cdd:TIGR02168  451 ELQEELERLEEALEELREELEEAEQALDAAERELAQ 486
PTZ00121 PTZ00121
MAEBL; Provisional
 169-482 7.44e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.44  E-value: 7.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  169 KEEKKQQEATEKQENKRLENQYAAARREAEARMRVEEERRQLEGRLQAEALRQqMEELKQKEMEATKLKKEQENLLRQRW 248
Cdd:PTZ00121 1179 EAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKK-AEEAKKDAEEAKKAEEERNNEEIRKF 1257

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  249 ELERLEEERRQMAA-----------------------LRRKTELGRFLKHQYNAQLNRRTQEIQEELEVDGRILQALLEK 305
Cdd:PTZ00121 1258 EEARMAHFARRQAAikaeearkadelkkaeekkkadeAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKK 1337

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  306 EGELQQVELARREQARADAAWMKQViEEQLQLEKAREAELQQLLREEAKEMWEKREAEWAREQVARDRLMSEVLTGRQQQ 385
Cdd:PTZ00121 1338 AEEAKKAAEAAKAEAEAAADEAEAA-EEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAA 1416

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  386 ILEKIEQNRRAQE----ETLKHREKLIRSLEEGKQLAQRAKEESEELKLARKQELEAQVAERQGQEWEAARQEEEEEEEA 461
Cdd:PTZ00121 1417 KKKADEAKKKAEEkkkaDEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAK 1496

                         330       340
                  ....*....|....*....|.
gi 148222456  462 RQAEEHSNAllqQEAKTMAEK 482
Cdd:PTZ00121 1497 KKADEAKKA---AEAKKKADE 1514
DUF5401 pfam17380
Family of unknown function (DUF5401); This is a family of unknown function found in ...
 187-482 8.24e-04

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.


Pssm-ID: 375164 [Multi-domain]  Cd Length: 722  Bit Score: 42.03  E-value: 8.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  187 ENQYAAARREAEARMRVEEERRQLEG--RLQAEALRQQMEElKQKEMEATKLKKEQENLLRQRWELERLEEERRQMAALR 264
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKfeKMEQERLRQEKEE-KAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAME 345

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  265 RKTELGRFLKHQYNAQLNR-RTQEIQEELEVDGRILQALLEK----EGELQQVELARR------EQARADAAWMKQVIEE 333
Cdd:pfam17380 346 RERELERIRQEERKRELERiRQEEIAMEISRMRELERLQMERqqknERVRQELEAARKvkileeERQRKIQQQKVEMEQI 425

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  334 QLQLEKAREAELQQLLREEAKEMWEKREAEWAREQVARDRLMSEVLTGRQQQILEKIEQNRRAQEEtlKHREKLIRSLEE 413
Cdd:pfam17380 426 RAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEE--QRRKILEKELEE 503

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 148222456  414 GKQlaqRAKEESEELKLarkqeLEAQVAERQGQEWEAARQEEEEEEEARQAEEHSNALLQQEAKTMAEK 482
Cdd:pfam17380 504 RKQ---AMIEEERKRKL-----LEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEE 564
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
 279-444 2.05e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 40.52  E-value: 2.05e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 279 AQLNRRTQEIQEELEVDGRILQALLEKEGELQQvELARREQARADAAWMKQVIEEQLQLEKAREAELQQLLREEAKEMWE 358
Cdd:COG4942   23 AEAEAELEQLQQEIAELEKELAALKKEEKALLK-QLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 359 KREAEWAREQVA-----RDRLM------SEVLTGRQQQILEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEE 427
Cdd:COG4942  102 QKEELAELLRALyrlgrQPPLAlllspeDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLA 181

                        170
                 ....*....|....*..
gi 148222456 428 LKLARKQELEAQVAERQ 444
Cdd:COG4942  182 ELEEERAALEALKAERQ 198
PRK13735 PRK13735
conjugal transfer mating pair stabilization protein TraG; Provisional
 120-229 8.04e-03

conjugal transfer mating pair stabilization protein TraG; Provisional


Pssm-ID: 184287 [Multi-domain]  Cd Length: 942  Bit Score: 38.96  E-value: 8.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 120 QDLKSAREEQRKLIAERLlYEHWKKNNPKLRELELDLHKKHVINSwatQKEEKKQQEATEKQENKRLENQYAAARREAEA 199
Cdd:PRK13735 833 QDIIADHQGHQAIIEQRT-QDSGIRNDVKHQVDNMVTEYEGNIGD---TQNSIRGEENTVKGQYSELQNHHKTEALSQNN 908

                         90       100       110
                 ....*....|....*....|....*....|.
gi 148222456 200 RMRVEEERRQ-LEGRLQAEALRQQMEELKQK 229
Cdd:PRK13735 909 KYNEEKSAQErMPGADSPEELMKRAKEYQDK 939
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 69-428 8.43e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 38.76  E-value: 8.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456  69 EKMKEEKRKILELRRERLRELLLEEQDLLAAELDELRLSmgLREQRLREQHQDLKSAREEQRKLIAERLLYEHWKKNNPK 148
Cdd:COG1196  417 ERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELE--EEEEALLELLAELLEEAALLEAALAELLEELAEAAARLL 494

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 149 LRELELDLHKKHVINSWATQKEEKKQQEATEKQENKRLENQYAAARREAEARMRVEEERRQLEGRLQAEALRQQMEELKQ 228
Cdd:COG1196  495 LLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRA 574

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 229 KEMEATKLKKEQENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYNAQLNRRTQEIQEELEV--DGRILQALLEKE 306
Cdd:COG1196  575 TFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVtlAGRLREVTLEGE 654

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148222456 307 GELQ---QVELARREQARADAAWMKQVIEEQLQLEKAREAELQQLLREEAKEMWEKREAEWAREQVARDRLMSEVLTGRQ 383
Cdd:COG1196  655 GGSAggsLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAER 734

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 148222456 384 QQILEKIEQNRRAQEETLKHREKLIRSLEEGKQLAQRAKEESEEL 428
Cdd:COG1196  735 EELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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