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Conserved domains on  [gi|124249216|ref|NP_082775|]
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leucine-rich repeat-containing protein 69 [Mus musculus]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 11469232)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Gene Ontology:  GO:0005515
PubMed:  11751054|7583641|14747988
SCOP:  4003523

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
8-233 1.18e-31

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 123.12  E-value: 1.18e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216   8 TALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNsiskvcpelrtltqltllnlgnnhlqevpEEIKYLTSLKN 87
Cdd:COG4886   67 LLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN-----------------------------EELSNLTNLES 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  88 LHLFGNRICRIaPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPKELCSLEHLSELHLNYNQIVY 167
Cdd:COG4886  118 LDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITD 196

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124249216 168 IPEEIKFLKNLQQLFLVRNNIEELPEEICHLEKLRVLDIAGNVIQIFPAGFQNLRLTEFYCEGNPL 233
Cdd:COG4886  197 LPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQL 262
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
8-233 1.18e-31

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 123.12  E-value: 1.18e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216   8 TALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNsiskvcpelrtltqltllnlgnnhlqevpEEIKYLTSLKN 87
Cdd:COG4886   67 LLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN-----------------------------EELSNLTNLES 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  88 LHLFGNRICRIaPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPKELCSLEHLSELHLNYNQIVY 167
Cdd:COG4886  118 LDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITD 196

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124249216 168 IPEEIKFLKNLQQLFLVRNNIEELPEEICHLEKLRVLDIAGNVIQIFPAGFQNLRLTEFYCEGNPL 233
Cdd:COG4886  197 LPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQL 262
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 19-209 4.58e-18

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 85.67  E-value: 4.58e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  19 LTLNGKRIT-KMPSTLEKLPNLKTLDLQNNSISKVCPE--LRTLTQLTLLNLGNNHLQ---------------------- 73
Cdd:PLN00113  74 IDLSGKNISgKISSAIFRLPYIQTINLSNNQLSGPIPDdiFTTSSSLRYLNLSNNNFTgsiprgsipnletldlsnnmls 153

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  74 -EVPEEIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT-VIPKELC 150
Cdd:PLN00113 154 gEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVgQIPRELGQMKSLKWIYLGYNNLSgEIPYEIG 233

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124249216 151 SLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFLVRNNIE-ELPEEICHLEKLRVLDIAGN 209
Cdd:PLN00113 234 GLTSLNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLQKLISLDLSDN 294
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 77-233 3.12e-14

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 70.97  E-value: 3.12e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  77 EEIKYLTSLKNLHLFGNRICRIAPgvFNGLHRLIMLNLNDNRLTSLpQEIGRLRSLTYLSLNRNNLTVIpKELCSLEHLS 156
Cdd:cd21340   18 DNLSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKI-ENLENLVNLKKLYLGGNRISVV-EGLENLTNLE 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 157 ELHLNYNQivyIPEEIKFL----------KNLQQLFLVRNNIEELpEEICHLEKLRVLDIAGNVIQ----IFPAGFQNLR 222
Cdd:cd21340   94 ELHIENQR---LPPGEKLTfdprslaalsNSLRVLNISGNNIDSL-EPLAPLRNLEQLDASNNQISdleeLLDLLSSWPS 169

                        170
                 ....*....|.
gi 124249216 223 LTEFYCEGNPL 233
Cdd:cd21340  170 LRELDLTGNPV 180
LRR_8 pfam13855
Leucine rich repeat;
83-142 1.84e-10

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 55.99  E-value: 1.84e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124249216   83 TSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSL-PQEIGRLRSLTYLSLNRNNL 142
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
8-233 1.18e-31

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 123.12  E-value: 1.18e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216   8 TALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNsiskvcpelrtltqltllnlgnnhlqevpEEIKYLTSLKN 87
Cdd:COG4886   67 LLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN-----------------------------EELSNLTNLES 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  88 LHLFGNRICRIaPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPKELCSLEHLSELHLNYNQIVY 167
Cdd:COG4886  118 LDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITD 196

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124249216 168 IPEEIKFLKNLQQLFLVRNNIEELPEEICHLEKLRVLDIAGNVIQIFPAGFQNLRLTEFYCEGNPL 233
Cdd:COG4886  197 LPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQL 262
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
8-283 8.62e-24

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 101.16  E-value: 8.62e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216   8 TALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNSISKVCPELRTLTQLTLLNLGNNHLQEVPEEIKYLTSLKN 87
Cdd:COG4886  107 EELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKE 186

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  88 LHLFGNRICRIaPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPK-------------------- 147
Cdd:COG4886  187 LDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPElgnltnleeldlsnnqltdl 265

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 148 -ELCSLEHLSELHLNYNQIVYIPEEIKFLKNLQQLFLVRNNIEELPEEICHLEKLRVLDIAGNVIQIFPAGFQNLRLTEF 226
Cdd:COG4886  266 pPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLS 345

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 124249216 227 YCEGNPLFLKRPFFAVQPKDLWTLREIAARFVLSLLEENDPLIMNVIESYPEVKDKL 283
Cdd:COG4886  346 LLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLL 402
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 19-209 4.58e-18

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 85.67  E-value: 4.58e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  19 LTLNGKRIT-KMPSTLEKLPNLKTLDLQNNSISKVCPE--LRTLTQLTLLNLGNNHLQ---------------------- 73
Cdd:PLN00113  74 IDLSGKNISgKISSAIFRLPYIQTINLSNNQLSGPIPDdiFTTSSSLRYLNLSNNNFTgsiprgsipnletldlsnnmls 153

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  74 -EVPEEIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT-VIPKELC 150
Cdd:PLN00113 154 gEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVgQIPRELGQMKSLKWIYLGYNNLSgEIPYEIG 233

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124249216 151 SLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFLVRNNIE-ELPEEICHLEKLRVLDIAGN 209
Cdd:PLN00113 234 GLTSLNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLQKLISLDLSDN 294
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 29-212 3.06e-15

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 76.81  E-value: 3.06e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  29 MPSTLEKLPNLKTLDLQNNSISKvcpelrtltqltllnlgnnhlqEVPEEIKYLTSLKNLHLFGNRICRIAPGVFNGLHR 108
Cdd:PLN00113 276 IPPSIFSLQKLISLDLSDNSLSG----------------------EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPR 333

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 109 LIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT-VIPKELCSLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFLVR 185
Cdd:PLN00113 334 LQVLQLWSNKFSgEIPKNLGKHNNLTVLDLSTNNLTgEIPEGLCSSGNLFKLILFSNSLEgEIPKSLGACRSLRRVRLQD 413

                        170       180
                 ....*....|....*....|....*...
gi 124249216 186 NNIE-ELPEEICHLEKLRVLDIAGNVIQ 212
Cdd:PLN00113 414 NSFSgELPSEFTKLPLVYFLDISNNNLQ 441
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 77-233 3.12e-14

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 70.97  E-value: 3.12e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  77 EEIKYLTSLKNLHLFGNRICRIAPgvFNGLHRLIMLNLNDNRLTSLpQEIGRLRSLTYLSLNRNNLTVIpKELCSLEHLS 156
Cdd:cd21340   18 DNLSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKI-ENLENLVNLKKLYLGGNRISVV-EGLENLTNLE 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 157 ELHLNYNQivyIPEEIKFL----------KNLQQLFLVRNNIEELpEEICHLEKLRVLDIAGNVIQ----IFPAGFQNLR 222
Cdd:cd21340   94 ELHIENQR---LPPGEKLTfdprslaalsNSLRVLNISGNNIDSL-EPLAPLRNLEQLDASNNQISdleeLLDLLSSWPS 169

                        170
                 ....*....|.
gi 124249216 223 LTEFYCEGNPL 233
Cdd:cd21340  170 LRELDLTGNPV 180
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 19-209 4.89e-14

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 70.20  E-value: 4.89e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  19 LTLNGKRITKMPStLEKLPNLKTLDLQNNSISKVcpelrtltqltllnlgnnhlqevpEEIKYLTSLKNLHLFGNRICRI 98
Cdd:cd21340    7 LYLNDKNITKIDN-LSLCKNLKVLYLYDNKITKI------------------------ENLEFLTNLTHLYLQNNQIEKI 61

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  99 APgvFNGLHRLIMLNLNDNRLTSLpQEIGRLRSLTYLSLNRNNL------TVIPKELCSL-EHLSELHLNYNQIVYIpEE 171
Cdd:cd21340   62 EN--LENLVNLKKLYLGGNRISVV-EGLENLTNLEELHIENQRLppgeklTFDPRSLAALsNSLRVLNISGNNIDSL-EP 137

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 124249216 172 IKFLKNLQQLFLVRNNIEELpEEIC----HLEKLRVLDIAGN 209
Cdd:cd21340  138 LAPLRNLEQLDASNNQISDL-EELLdllsSWPSLRELDLTGN 178
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 15-201 2.18e-12

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 68.34  E-value: 2.18e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  15 NTKILTLNGKRIT-KMPSTLEKLPNLKTLDLQNNSISKVCP-ELRTLTQLTLLNLGNNHLQ-EVPEEIKYLTSLKNLHLF 91
Cdd:PLN00113 165 SLKVLDLGGNVLVgKIPNSLTNLTSLEFLTLASNQLVGQIPrELGQMKSLKWIYLGYNNLSgEIPYEIGGLTSLNHLDLV 244

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  92 GNRIC-------------------------RIAPGVFnGLHRLIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT-V 144
Cdd:PLN00113 245 YNNLTgpipsslgnlknlqylflyqnklsgPIPPSIF-SLQKLISLDLSDNSLSgEIPELVIQLQNLEILHLFSNNFTgK 323

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 124249216 145 IPKELCSLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFLVRNNIE-ELPEEIC---HLEKL 201
Cdd:PLN00113 324 IPVALTSLPRLQVLQLWSNKFSgEIPKNLGKHNNLTVLDLSTNNLTgEIPEGLCssgNLFKL 385
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
14-233 2.57e-11

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 64.72  E-value: 2.57e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  14 KNTKILTLNGKRITKMPSTLEKlpNLKTLDLQNNSIsKVCPELRTLTQLTLLNLGNNhLQEVPEEIKylTSLKNLHLFGN 93
Cdd:PRK15370 178 NNKTELRLKILGLTTIPACIPE--QITTLILDNNEL-KSLPENLQGNIKTLYANSNQ-LTSIPATLP--DTIQEMELSIN 251

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  94 RICRIAPGVFNGLHRLImlnLNDNRLTSLPQEIGRlrSLTYLSLNRNNLTVIPKELCSleHLSELHLNYNQIVYIPEEIK 173
Cdd:PRK15370 252 RITELPERLPSALQSLD---LFHNKISCLPENLPE--ELRYLSVYDNSIRTLPAHLPS--GITHLNVQSNSLTALPETLP 324

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 174 flKNLQQLFLVRNNIEELPEEIChlEKLRVLDIAGNVIQIFPAGFQNlRLTEFYCEGNPL 233
Cdd:PRK15370 325 --PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQITVLPETLPP-TITTLDVSRNAL 379
LRR_8 pfam13855
Leucine rich repeat;
83-142 1.84e-10

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 55.99  E-value: 1.84e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124249216   83 TSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSL-PQEIGRLRSLTYLSLNRNNL 142
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
104-233 2.70e-09

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 58.02  E-value: 2.70e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 104 NGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPKELCSLEHLSELHLNYNqivyipEEIKFLKNLQQLFL 183
Cdd:COG4886   47 LLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN------EELSNLTNLESLDL 120

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 124249216 184 VRNNIEELPEEICHLEKLRVLDIAGNVIQIFPAGFQNL-RLTEFYCEGNPL 233
Cdd:COG4886  121 SGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLtNLKSLDLSNNQL 171
LRR_8 pfam13855
Leucine rich repeat;
108-165 4.05e-08

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 49.45  E-value: 4.05e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  108 RLIMLNLNDNRLTSLPQEI-GRLRSLTYLSLNRNNLTVI-PKELCSLEHLSELHLNYNQI 165
Cdd:pfam13855   2 NLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
130-188 4.48e-07

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 46.36  E-value: 4.48e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124249216  130 RSLTYLSLNRNNLTVIPKE-LCSLEHLSELHLNYNQIVYI-PEEIKFLKNLQQLFLVRNNI 188
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGaFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 28-186 5.08e-07

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 51.39  E-value: 5.08e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  28 KMPSTLEKLPNLKTLDLQNNSISKVCPELR--TLTQLTLLNLGNNHLQEVPEEIKYlTSLKNLHLFGNRICRIAPGVFNG 105
Cdd:PLN00113 419 ELPSEFTKLPLVYFLDISNNNLQGRINSRKwdMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLGS 497

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 106 LHRLIMLNLNDNRLTS-LPQEIGRLRSLTYLSLNRNNLT-VIPKELCSLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLF 182
Cdd:PLN00113 498 LSELMQLKLSENKLSGeIPDELSSCKKLVSLDLSHNQLSgQIPASFSEMPVLSQLDLSQNQLSgEIPKNLGNVESLVQVN 577


                 ....
gi 124249216 183 LVRN 186
Cdd:PLN00113 578 ISHN 581
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 17-209 1.42e-06

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 50.23  E-value: 1.42e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  17 KILTLNGKRIT-KMPSTLEKLPNLKTLDLQNNSISKVCPELRTLT--QLTLLNLGNNHLQEVPEEIKYLTSLKNLHLFGN 93
Cdd:PLN00113 335 QVLQLWSNKFSgEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSgnLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  94 RICRIAPGVFNGLHRLIMLNLNDNRLT-------------------------SLPQEIGRLRsLTYLSLNRNNLT-VIPK 147
Cdd:PLN00113 415 SFSGELPSEFTKLPLVYFLDISNNNLQgrinsrkwdmpslqmlslarnkffgGLPDSFGSKR-LENLDLSRNQFSgAVPR 493

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 124249216 148 ELCSLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFLVRNNIE-ELPEEICHLEKLRVLDIAGN 209
Cdd:PLN00113 494 KLGSLSELMQLKLSENKLSgEIPDELSSCKKLVSLDLSHNQLSgQIPASFSEMPVLSQLDLSQN 557
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 10-147 3.26e-06

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.47  E-value: 3.26e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  10 LKGGKNTKILTLNGKRITKMPStLEKLPNLKTLDLQNNSISKVCPELRTLTQLTLLNLGNN----------------HL- 72
Cdd:cd21340   20 LSLCKNLKVLYLYDNKITKIEN-LEFLTNLTHLYLQNNQIEKIENLENLVNLKKLYLGGNRisvveglenltnleelHIe 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  73 -QEVPEE---------IKYL-TSLKNLHLFGNRICRIAPgvFNGLHRLIMLNLNDNRLTSLP---QEIGRLRSLTYLSLN 138
Cdd:cd21340   99 nQRLPPGekltfdprsLAALsNSLRVLNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEellDLLSSWPSLRELDLT 176


                 ....*....
gi 124249216 139 RNNLTVIPK 147
Cdd:cd21340  177 GNPVCKKPK 185
PRK15387 PRK15387
type III secretion system effector E3 ubiquitin transferase SspH2;
23-209 8.81e-06

type III secretion system effector E3 ubiquitin transferase SspH2;


Pssm-ID: 185285 [Multi-domain]  Cd Length: 788  Bit Score: 47.46  E-value: 8.81e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  23 GKRITKMPSTLEKLPNLKTLDLQNNSISKVCPELRTLTQLtllnlgNNHLQEVPeeiKYLTSLKNLHLFGNRICRIaPGV 102
Cdd:PRK15387 291 GNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAY------NNQLTSLP---TLPSGLQELSVSDNQLASL-PTL 360

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 103 FNGLHRLIMLNlndNRLTSLPQEIGRLRSLTyLSLNR-NNLTVIPKELcslehlSELHLNYNQIVYIPeeiKFLKNLQQL 181
Cdd:PRK15387 361 PSELYKLWAYN---NRLTSLPALPSGLKELI-VSGNRlTSLPVLPSEL------KELMVSGNRLTSLP---MLPSGLLSL 427

                        170       180
                 ....*....|....*....|....*...
gi 124249216 182 FLVRNNIEELPEEICHLEKLRVLDIAGN 209
Cdd:PRK15387 428 SVYRNQLTRLPESLIHLSSETTVNLEGN 455
LRR_8 pfam13855
Leucine rich repeat;
37-119 2.79e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 41.36  E-value: 2.79e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216   37 PNLKTLDLQNNSISKVCPELrtltqltllnlgnnhlqevpeeIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLND 116
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGA----------------------FKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSG 58


                  ...
gi 124249216  117 NRL 119
Cdd:pfam13855  59 NRL 61
LRR_8 pfam13855
Leucine rich repeat;
154-211 2.96e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 41.36  E-value: 2.96e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  154 HLSELHLNYNQIVYIPEEI-KFLKNLQQLFLVRNNIEEL-PEEICHLEKLRVLDIAGNVI 211
Cdd:pfam13855   2 NLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
PLN03150 PLN03150
hypothetical protein; Provisional
 75-143 4.65e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 45.19  E-value: 4.65e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  75 VPEEIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT 143
Cdd:PLN03150 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLS 503
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 33-221 6.71e-05

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 44.40  E-value: 6.71e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  33 LEKLPNLKTLDLQNNSIskvcpelrtltqltllnlGNNHLQEVPEEIKYLTSLKNLHLFGNRI-CRIAPGVFNGL---HR 108
Cdd:COG5238  204 LTQNTTVTTLWLKRNPI------------------GDEGAEILAEALKGNKSLTTLDLSNNQIgDEGVIALAEALknnTT 265

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 109 LIMLNLNDNRLT-----SLPQEIGRLRSLTYLSLNRNNLT-----VIPKELCSLEHLSELHLNYNQI-----VYIPEEIK 173
Cdd:COG5238  266 VETLYLSGNQIGaegaiALAKALQGNTTLTSLDLSVNRIGdegaiALAEGLQGNKTLHTLNLAYNGIgaqgaIALAKALQ 345

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 124249216 174 FLKNLQQLFLVRNNI-----EELPEEICHLEKLRVLDIAGNviQIFPAGFQNL 221
Cdd:COG5238  346 ENTTLHSLDLSDNQIgdegaIALAKYLEGNTTLRELNLGKN--NIGKQGAEAL 396
LRR_9 pfam14580
Leucine-rich repeat;
81-146 2.52e-04

Leucine-rich repeat;


Pssm-ID: 405295 [Multi-domain]  Cd Length: 175  Bit Score: 41.29  E-value: 2.52e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 124249216   81 YLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSL--PQEIGRLRSLTYLSLNRNNLTVIP 146
Cdd:pfam14580  62 LLRRLKTLLLNNNRICRIGEGLGEALPNLTELILTNNNLQELgdLDPLASLKKLTFLSLLRNPVTNKP 129
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
81-233 2.75e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 42.61  E-value: 2.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  81 YLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPKELCSLEHLSELHL 160
Cdd:COG4886    1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 124249216 161 NYNQIVYIPEEIKFLKNLQQLFLVRNNieelpeEICHLEKLRVLDIAGNVIQIFPAGFQNLR-LTEFYCEGNPL 233
Cdd:COG4886   81 LLSLLLLGLTDLGDLTNLTELDLSGNE------ELSNLTNLESLDLSGNQLTDLPEELANLTnLKELDLSNNQL 148
PLN03150 PLN03150
hypothetical protein; Provisional
 29-117 6.58e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 41.34  E-value: 6.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  29 MPSTLEKLPNLKTLDLQNNSISKVCPELR-TLTQLTLLNLGNNHLQ-EVPEEIKYLTSLKNLHLFGNRICRIAPGVFNG- 105
Cdd:PLN03150 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLgSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLSGRVPAALGGr 513

                         90
                 ....*....|...
gi 124249216 106 -LHRLIMlNLNDN 117
Cdd:PLN03150 514 lLHRASF-NFTDN 525
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 19-207 7.16e-04

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 41.40  E-value: 7.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216   19 LTLNGKRITKMPSTLEKLPNLKTLDLQNNSISKVCPELRTLTQLTLLNLGN-NHLQEVPEEIKYLTSLKNLHLFGNRICR 97
Cdd:PLN03210  616 LQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDcSSLVELPSSIQYLNKLEDLDMSRCENLE 695

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216   98 IAPGVFNgLHRLIMLNLND-NRLTSLPqEIGrlRSLTYLSLNRNNLTVIPKELcSLEHLSELHLNYNQIVYIPEEIKFLK 176
Cdd:PLN03210  696 ILPTGIN-LKSLYRLNLSGcSRLKSFP-DIS--TNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSEKLWERVQPLT 770

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 124249216  177 --------NLQQLFLVRN-NIEELPEEICHLEKLRVLDIA 207
Cdd:PLN03210  771 plmtmlspSLTRLFLSDIpSLVELPSSIQNLHKLEHLEIE 810
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
17-181 1.34e-03

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 40.45  E-value: 1.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  17 KILTLNGKRITKMPstlEKLPN-LKTLDLQNNSISKVcPELRTLTQLTLLNlGNNHLQEVPEEIKylTSLKNLHLFGNRI 95
Cdd:PRK15370 286 RYLSVYDNSIRTLP---AHLPSgITHLNVQSNSLTAL-PETLPPGLKTLEA-GENALTSLPASLP--PELQVLDVSKNQI 358

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  96 CrIAPGVFNGlhRLIMLNLNDNRLTSLPQEIGRlrSLTYLSLNRNNLTVIPKELCSLehLSELHLNYNQIV-YIPEEIKF 174
Cdd:PRK15370 359 T-VLPETLPP--TITTLDVSRNALTNLPENLPA--ALQIMQASRNNLVRLPESLPHF--RGEGPQPTRIIVeYNPFSERT 431


                 ....*..
gi 124249216 175 LKNLQQL 181
Cdd:PRK15370 432 IQNMQRL 438
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 85-226 2.81e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 39.83  E-value: 2.81e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  85 LKNLHLFGNRIC-RIAPGVFnGLHRLIMLNLNDNRLT-SLPQEIGRL-RSLTYLSLNRNNLT-VIPKelcslehlselhl 160
Cdd:PLN00113  71 VVSIDLSGKNISgKISSAIF-RLPYIQTINLSNNQLSgPIPDDIFTTsSSLRYLNLSNNNFTgSIPR------------- 136

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 124249216 161 nynqivyipeeiKFLKNLQQLFLVRNNIE-ELPEEICHLEKLRVLDIAGNVIQ-IFPAGFQNLRLTEF 226
Cdd:PLN00113 137 ------------GSIPNLETLDLSNNMLSgEIPNDIGSFSSLKVLDLGGNVLVgKIPNSLTNLTSLEF 192
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 30-211 3.61e-03

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 38.88  E-value: 3.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216  30 PSTLEKLPNLKTLDLQNNSISKvcpelrtltqltllnlgnnHLQEVPEEIKYLTSLKNLHLFGNRI-CRIAPGVFNGL-- 106
Cdd:cd00116   74 LQGLTKGCGLQELDLSDNALGP-------------------DGCGVLESLLRSSSLQELKLNNNGLgDRGLRLLAKGLkd 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249216 107 --HRLIMLNLNDNRLTSlpqeigrlRSLTYLSlnrnnltvipKELCSLEHLSELHLNYNQ-----IVYIPEEIKFLKNLQ 179
Cdd:cd00116  135 lpPALEKLVLGRNRLEG--------ASCEALA----------KALRANRDLKELNLANNGigdagIRALAEGLKANCNLE 196

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 124249216 180 QLFLVRNNIEE-----LPEEICHLEKLRVLDIAGNVI 211
Cdd:cd00116  197 VLDLNNNGLTDegasaLAETLASLKSLEVLNLGDNNL 233
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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