|
Name |
Accession |
Description |
Interval |
E-value |
| HkD_Daple |
cd22228 |
Hook domain found in Daple (Dvl-associating protein with a high frequency of leucine residues) ... |
12-164 |
1.04e-97 |
|
Hook domain found in Daple (Dvl-associating protein with a high frequency of leucine residues) and similar proteins; Protein Daple, also called coiled-coil domain-containing protein 88C (CCDC88C), or Hook-related protein 2 (HkRP2), is a novel non-receptor nucleotide exchange factor (GEF) required for activation of guanine nucleotide-binding proteins (G-proteins) during non-canonical Wnt signaling.
Pssm-ID: 411799 Cd Length: 153 Bit Score: 311.09 E-value: 1.04e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 12 FLQSPLVTWVKTFGSFGSGHQDNLTLYMDLVDGIFLNQIMLQIDPRPSNQRINKHVNNDVNLRIQNLSILVRNIKTYYQE 91
Cdd:cd22228 1 FLQSPLVTWVKTFGPLGFGSEDKLSMYMDLVDGVFLNKIMLQIDPRPTNQRVNKHVNNDVNLRIQNLTILVRHIKTYYQE 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 92 VLQQLIVMNLPNVLMIGKDPLSGKSMEEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEVTH 164
Cdd:cd22228 81 VLQQLIVMNLPNVLMIGKDPLSGKSMEEIKKMLLLVLGCAVQCERKEEFIERIKQLDIETQAAIVSHIQEVTH 153
|
|
| HkD_HkRP |
cd22223 |
Hook domain found in the Hook-related protein (HkRP) family; The HkRP family includes Daple, ... |
12-164 |
1.67e-76 |
|
Hook domain found in the Hook-related protein (HkRP) family; The HkRP family includes Daple, Girdin and Gipie. Daple, also called Dvl-associating protein with a high frequency of leucine residues, or coiled-coil domain-containing protein 88C (CCDC88C), or Hook-related protein 2 (HkRP2), is a novel non-receptor nucleotide exchange factor (GEF) required for activation of guanine nucleotide-binding proteins (G-proteins) during non-canonical Wnt signaling. Girdin, also called Akt phosphorylation enhancer (APE), or coiled-coil domain-containing protein 88A (CCDC88A), or G alpha-interacting vesicle-associated protein (GIV), or Girders of actin filament, or Hook-related protein 1 (HkRP1), is a bifunctional modulator of guanine nucleotide-binding proteins (G proteins). It acts as a non-receptor guanine nucleotide exchange factor which binds to and activates guanine nucleotide-binding protein G(i) alpha subunits. It also acts as a guanine nucleotide dissociation inhibitor for guanine nucleotide-binding protein G(s) subunit alpha GNAS. In addition, Girdin plays an essential role in cell migration. Gipie, also called GRP78-interacting protein induced by ER stress, or coiled-coil domain-containing protein 88B (CCDC88B), or brain leucine zipper domain-containing protein, or Hook-related protein 3 (HkRP3), is a novel actin cytoskeleton-binding protein and Akt substrate that regulates cell migratory responses in various biological contexts. It acts as a positive regulator of T-cell maturation and inflammatory function. As a microtubule-binding protein, Gipie regulates lytic granule clustering and NK cell killing. All family members contain a conserved globular Hook domain which folds as a variant of the helical calponin homology (CH) domain.
Pssm-ID: 411794 Cd Length: 149 Bit Score: 250.20 E-value: 1.67e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 12 FLQSPLVTWVKTFGSFGSghqDNLTlYMDLVDGIFLNQIMLQIDPRPSNQRINKHVNNDVNLRIQNLSILVRNIKTYYQE 91
Cdd:cd22223 1 FLSSPLVTWAKTFADDGS---AELS-YTDLVDGVFLNNVMLQIDPRPFSEVSNRNVDDDVNARIQNLDLLLRNIKSFYQE 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 92 VLQQLIVMNLPNVLMIGKDPLSGKSMEEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEVTH 164
Cdd:cd22223 77 VLQQLIVMKLPDILTIGREPESEQSLEELEKLLLLLLGCAVQCERKEEFIERIKNLDLEVQHALVACIQEVTD 149
|
|
| HkD_Girdin |
cd22229 |
Hook domain found in Girdin and similar proteins; Girdin, also called Akt phosphorylation ... |
9-164 |
1.52e-74 |
|
Hook domain found in Girdin and similar proteins; Girdin, also called Akt phosphorylation enhancer (APE), or coiled-coil domain-containing protein 88A (CCDC88A), or G alpha-interacting vesicle-associated protein (GIV), or Girders of actin filament, or Hook-related protein 1 (HkRP1), is a bifunctional modulator of guanine nucleotide-binding proteins (G proteins). It acts as a non-receptor guanine nucleotide exchange factor which binds to and activates guanine nucleotide-binding protein G(i) alpha subunits. It also acts as a guanine nucleotide dissociation inhibitor for guanine nucleotide-binding protein G(s) subunit alpha GNAS. In addition, Girdin plays an essential role in cell migration.
Pssm-ID: 411800 Cd Length: 156 Bit Score: 244.70 E-value: 1.52e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 9 VELFLQSPLVTWVKTFGSFGSGHQDNLTLYMDLVDGIFLNQIMLQIDPRPSNQRINKHVNNDVNLRIQNLSILVRNIKTY 88
Cdd:cd22229 1 LEQFMSSPLVTWVKTFGPLATGNGTPLDEYVALVDGVFLNEVMLQINPKSSNQRVNKKVNNDASLRIQNLSILVKQIKLY 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47059089 89 YQEVLQQLIVMNLPNVLMIGKDPLSGKSMEEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEVTH 164
Cdd:cd22229 81 YQETLQQLIMMSLPNVLVLGRNPLSEQGTEEMKKLLLLLLGCAVQCERKEEFIERIQTLDFDTKAAVAAHIQEVTH 156
|
|
| HkD_Gipie |
cd22230 |
Hook domain found in Gipie (GRP78-interacting protein induced by ER stress) and similar ... |
10-163 |
6.67e-40 |
|
Hook domain found in Gipie (GRP78-interacting protein induced by ER stress) and similar proteins; Gipie, also called coiled-coil domain-containing protein 88B (CCDC88B), or brain leucine zipper domain-containing protein, or Hook-related protein 3 (HkRP3), is a novel actin cytoskeleton-binding protein and Akt substrate that regulates cell migratory responses in various biological contexts. It acts as a positive regulator of T-cell maturation and inflammatory function. As a microtubule-binding protein, Gipie regulates lytic granule clustering and NK cell killing.
Pssm-ID: 411801 Cd Length: 170 Bit Score: 146.13 E-value: 6.67e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 10 ELFLQSPLVTWVKTF-GSFGS--------------GHQDNLTLYMDLVDGIFLNQIMLQIDPRPSNQRINKHVNNDVNLR 74
Cdd:cd22230 1 EEFMSGALVTWALGFeGLVGEeedslgfpeeeeeeGTLDAEKRFLRLSNGDLLNRVMGIIDPSPRGGPRMRGDDGPAAHR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 75 IQNLSILVRNIKTYYQEVLQQLIVMNLPNVLMIGKDPLSGKSMEEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAG 154
Cdd:cd22230 81 VQNLHILWGRLRDFYQEELQQLILSPPPDLQVMGRDPFTEEAVQELEKLLRLLLGAAVQCERRELFIRHIQGLDLDVQAE 160
|
....*....
gi 47059089 155 IVAHIQEVT 163
Cdd:cd22230 161 LAEAIQEVT 169
|
|
| HkD_SF |
cd22211 |
Hook domain-containing proteins superfamily; The Hook domain superfamily includes Hook adaptor ... |
14-164 |
1.08e-36 |
|
Hook domain-containing proteins superfamily; The Hook domain superfamily includes Hook adaptor proteins, Hook-related proteins and nuclear mitotic apparatus protein (NuMA). They share an N-terminal conserved globular Hook domain, which folds as a variant of the helical calponin homology (CH) domain with an extended alpha-helix. The Hook domain is responsible for the binding of microtubule. The Hook family includes microtubule-binding proteins, Hook1-3. Hook1 is required for spermatid differentiation. Hook2 contributes to the establishment and maintenance of centrosome function. Hook3 is an adaptor protein for microtubule-dependent intracellular vesicle and protein trafficking, and is involved in Golgi and endosome transport. Hook proteins are components of the FTS/Hook/FHIP complex (FHF complex), which may function to promote vesicle trafficking and/or fusion via the homotypic vesicular protein sorting (HOPS) complex. The Hook-related protein (HkRP) family includes Daple, Girdin and Gipie. Daple, also called Dvl-associating protein with a high frequency of leucine residues, or coiled-coil domain-containing protein 88C(CCDC88C), or Hook-related protein 2 (HkRP2), is a novel non-receptor nucleotide exchange factor (GEF) required for activation of guanine nucleotide-binding proteins (G-proteins) during non-canonical Wnt signaling. Girdin, also called Akt phosphorylation enhancer (APE), or coiled-coil domain-containing protein 88A (CCDC88A), or G alpha-interacting vesicle-associated protein (GIV), or Girders of actin filament, or Hook-related protein 1 (HkRP1), is a bifunctional modulator of guanine nucleotide-binding proteins (G proteins). Gipie, also called GRP78-interacting protein induced by ER stress, or coiled-coil domain-containing protein 88B(CCDC88B), or brain leucine zipper domain-containing protein, or Hook-related protein 3 (HkRP3), is a novel actin cytoskeleton-binding protein and Akt substrate that regulates cell migratory responses in various biological contexts. NuMA, also called nuclear mitotic apparatus protein 1, or nuclear matrix protein-22 (NMP-22), or SP-H antigen, is a microtubule (MT)-binding protein that plays a role in the formation and maintenance of the spindle poles and the alignment and the segregation of chromosomes during mitotic cell division.
Pssm-ID: 411792 Cd Length: 145 Bit Score: 136.25 E-value: 1.08e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 14 QSPLVTWVKTFGSFGSghQDNLTlymDLVDGIFLNQIMLQIDPR--PSNQRINKHVNNDVNLRIQNLSILVRNIKTYYQE 91
Cdd:cd22211 1 EAALLAWINTFPLSSP--VESLD---DLSDGVVLAEILSQIDPSyfDSEWLESRDSSDNWVLKLNNLKKLYRSLSKYYRE 75
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47059089 92 VLQQLIV-MNLPNVLMIGKDPlsgkSMEEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEVTH 164
Cdd:cd22211 76 VLGQQLSdLPLPDLSAIARDG----DEEEIVKLLELVLGAAVQCENKEEYIARIQQLDESTQAELMLIIQEVLE 145
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
489-1307 |
9.20e-28 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 123.24 E-value: 9.20e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 489 LEESS--LKYGELEKENQqlsKKIEKLQTQLERekqsnqdLETLSEELIREKEQLQsgmeaLKADRARQIKDLEQEKGHL 566
Cdd:TIGR02168 161 FEEAAgiSKYKERRKETE---RKLERTRENLDR-------LEDILNELERQLKSLE-----RQAEKAERYKELKAELREL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 567 HQAVWSLR------ERPQVNST-KDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAK-----------EKGEQAE 628
Cdd:TIGR02168 226 ELALLVLRleelreELEELQEElKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQkelyalaneisRLEQQKQ 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 629 ALEKELHRLEKENEQLTKEVTSLKA----ATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQ-QLGQEN 703
Cdd:TIGR02168 306 ILRERLANLERQLEELEAQLEELESkldeLAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEeQLETLR 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 704 LELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQ--SVSAENLQLQHSLESSTHKSQA 781
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAEleELEEELEELQEELERLEEALEE 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 782 LQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVE--------------- 846
Cdd:TIGR02168 466 LREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvdegyeaaieaalgg 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 847 -LKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNRDLTKQVTMHTRTLTTLRE-DLVLEKLKSQQLSSE 924
Cdd:TIGR02168 546 rLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKfDPKLRKALSYLLGGV 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 925 L--DKLSQELEKVG-LSKDLLLQEDDGH----------GDGKGKTeSALKTTLAMKEekivfLEAQVEEKESLSRQLQIE 991
Cdd:TIGR02168 626 LvvDDLDNALELAKkLRPGYRIVTLDGDlvrpggvitgGSAKTNS-SILERRREIEE-----LEEKIEELEEKIAELEKA 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 992 LQMIKKEHE-------QLRQTQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLRVK------------DRAIE 1052
Cdd:TIGR02168 700 LAELRKELEeleeeleQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEieeleerleeaeEELAE 779
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1053 LERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAqytvlqs 1132
Cdd:TIGR02168 780 AEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSE------- 852
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1133 QQAAKEAEHEGLQQQQEQLAAVYEALLQdhkhlgtlyecqssEYEALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKA 1212
Cdd:TIGR02168 853 DIESLAAEIEELEELIEELESELEALLN--------------ERASLEEALALLRSELEELSEELRELESKRSELRRELE 918
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1213 ELEELEKVLSTEREALEREQKTNAIATSENQRLrgELDRISFLHQQLKGEYEELHAHTKELKTSLNN-------SQLELS 1285
Cdd:TIGR02168 919 ELREKLAQLELRLEGLEVRIDNLQERLSEEYSL--TLEEAEALENKIEDDEEEARRRLKRLENKIKElgpvnlaAIEEYE 996
|
890 900
....*....|....*....|..
gi 47059089 1286 RWQVRFDELKEQHQSMDISLTK 1307
Cdd:TIGR02168 997 ELKERYDFLTAQKEDLTEAKET 1018
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
262-1077 |
6.57e-27 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 120.55 E-value: 6.57e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 262 RLRRVRQELEekteQLADTRHEVD-QLV-LELQkakqdniqlaadARSARAYRDELDSLREKANRVerLEMDLVRCKEKL 339
Cdd:TIGR02168 180 KLERTRENLD----RLEDILNELErQLKsLERQ------------AEKAERYKELKAELRELELAL--LVLRLEELREEL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 340 HDVDFYKARMEELREDniiLIETKAMLEEQLTASRAR----SDKVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEEY 415
Cdd:TIGR02168 242 EELQEELKEAEEELEE---LTAELQELEEKLEELRLEvselEEEIEELQKELYALANEISRLEQQKQILRERLANLERQL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 416 MVLEMAQKQSMKESAHLGWELEQLSKNADlsdasrksfvfELNECASSRILKLEKENQSLQSTIQGLRDTSLALEESSLK 495
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLE-----------ELKEELESLEAELEELEAELEELESRLEELEEQLETLRSK 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 496 YGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEqlqsgmEALKADRARQIKDLEQEKGHLHQAVWSLRE 575
Cdd:TIGR02168 388 VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE------EAELKELQAELEELEEELEELQEELERLEE 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 576 RpqvnsTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLE------------KENEQ 643
Cdd:TIGR02168 462 A-----LEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSgilgvlselisvDEGYE 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 644 LTKE-----------VTSLKAATEKVEALEHQSQG----LELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRK 708
Cdd:TIGR02168 537 AAIEaalggrlqavvVENLNAAKKAIAFLKQNELGrvtfLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRK 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 709 MVEAMRFTSAKMAQIETENRQLEREKEELR---RDVELLKT---LSKKSERLELSYQSVSAENLQLQHSLESSTHKSQAL 782
Cdd:TIGR02168 617 ALSYLLGGVLVVDDLDNALELAKKLRPGYRivtLDGDLVRPggvITGGSAKTNSSILERRREIEELEEKIEELEEKIAEL 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 783 QRELSQLEAERQALRRDLETLQL----THKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAK 858
Cdd:TIGR02168 697 EKALAELRKELEELEEELEQLRKeleeLSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEE 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 859 LSAAEKESRALDKELA-------------------------RCRDVGSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVL 913
Cdd:TIGR02168 777 LAEAEAEIEELEAQIEqlkeelkalrealdelraeltllneEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIES 856
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 914 EKLKSQQLSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTlamkEEKIVFLEAQVEEKESLSRQLQIELQ 993
Cdd:TIGR02168 857 LAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL----ESKRSELRRELEELREKLAQLELRLE 932
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 994 MIKKEHEQLRQ--TQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLRVKDRAIElersnaalqaERQLLKEQL 1071
Cdd:TIGR02168 933 GLEVRIDNLQErlSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIE----------EYEELKERY 1002
|
....*.
gi 47059089 1072 QHLETQ 1077
Cdd:TIGR02168 1003 DFLTAQ 1008
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
378-1234 |
1.03e-26 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 119.78 E-value: 1.03e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 378 DKVHELEK--ENLQLKSKLHD--LELDRDADKKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSF 453
Cdd:TIGR02168 193 DILNELERqlKSLERQAEKAEryKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 454 VFELNEcASSRILKLEKENQSLQSTIQGLrdtslaleESSLKygELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEE 533
Cdd:TIGR02168 273 RLEVSE-LEEEIEELQKELYALANEISRL--------EQQKQ--ILRERLANLERQLEELEAQLEELESKLDELAEELAE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 534 LIREKEQLQSGMEALKAdrarQIKDLEQEKGHLHQAVWSLRE-RPQVNSTKDVEKENRALHQA-VTEAGSKLSQLELEKQ 611
Cdd:TIGR02168 342 LEEKLEELKEELESLEA----ELEELEAELEELESRLEELEEqLETLRSKVAQLELQIASLNNeIERLEARLERLEDRRE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 612 QLHRDLEEA---------KEKGEQAEALEKELHRLEKENEQLtkeVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTL 682
Cdd:TIGR02168 418 RLQQEIEELlkkleeaelKELQAELEELEEELEELQEELERL---EEALEELREELEEAEQALDAAERELAQLQARLDSL 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 683 QNVSVQLEGLERDKQQLGQENLELRKMV----EAMRFTSAKMAQIET---ENRQ--LEREKEELRRDVELLK-TLSKKSE 752
Cdd:TIGR02168 495 ERLQENLEGFSEGVKALLKNQSGLSGILgvlsELISVDEGYEAAIEAalgGRLQavVVENLNAAKKAIAFLKqNELGRVT 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 753 RLELSyqsvSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLqLTH----KQLEGAEEDRKALEQEVAQLE 828
Cdd:TIGR02168 575 FLPLD----SIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYL-LGGvlvvDDLDNALELAKKLRPGYRIVT 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 829 KDKKLL-----------EKEARRLWQQVELKDAilddsAAKLSAAEKESRALDKELARCRDvgsKLKELEKDNRDLTKQV 897
Cdd:TIGR02168 650 LDGDLVrpggvitggsaKTNSSILERRREIEEL-----EEKIEELEEKIAELEKALAELRK---ELEELEEELEQLRKEL 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 898 TMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEKVGLSKDLLLQEddghgdgKGKTESALKTTlamkEEKIVFLEAQ 977
Cdd:TIGR02168 722 EELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEER-------LEEAEEELAEA----EAEIEELEAQ 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 978 VEEkesLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRppgkvtSHQEKEAWEpshkeatmellrvkDRAIELERSN 1057
Cdd:TIGR02168 791 IEQ---LKEELKALREALDELRAELTLLNEEAANLRERLES------LERRIAATE--------------RRLEDLEEQI 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1058 AALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAK 1137
Cdd:TIGR02168 848 EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQL 927
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1138 EAEHEGLQQQ----QEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQH-SCLKTLHR-NLEL--EHKELGERHGDLQQ 1209
Cdd:TIGR02168 928 ELRLEGLEVRidnlQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLeNKIKELGPvNLAAieEYEELKERYDFLTA 1007
|
890 900 910
....*....|....*....|....*....|
gi 47059089 1210 RKAELEE----LEKVLS-TEREALEREQKT 1234
Cdd:TIGR02168 1008 QKEDLTEaketLEEAIEeIDREARERFKDT 1037
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
248-836 |
3.87e-26 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 117.73 E-value: 3.87e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 248 DKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAyrdeldSLREKANRVER 327
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA------EEYELLAELAR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 328 LEMDLVRCKEKLHDvdfYKARMEELREDNIILIETKAMLEEQLTASRARSDkvhELEKENLQLKSKLHDLELDRDADKKQ 407
Cdd:COG1196 300 LEQDIARLEERRRE---LEERLEELEEELAELEEELEELEEELEELEEELE---EAEEELEEAEAELAEAEEALLEAEAE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 408 IEKLLEEYMVLEMAQKQSMKESAhlgwELEQLSKNADLSDASRKSfvfelnecassRILKLEKENQSLQSTIQGLR---- 483
Cdd:COG1196 374 LAEAEEELEELAEELLEALRAAA----ELAAQLEELEEAEEALLE-----------RLERLEEELEELEEALAELEeeee 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 484 DTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELiREKEQLQSGMEALKADRARQIKDLEQEK 563
Cdd:COG1196 439 EEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEA-AARLLLLLEAEADYEGFLEGVKAALLLA 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 564 G--HLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQL--ELEKQQLHRDLEEAKEKGEQAEALEKELHRLEK 639
Cdd:COG1196 518 GlrGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAieYLKAAKAGRATFLPLDKIRARAALAAALARGAI 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 640 EneqltKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEamRFTSAK 719
Cdd:COG1196 598 G-----AAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTG--GSRREL 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 720 MAQIETENRQLEREKEELRRDVELLKTLSKKSERLELsyqsvsAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRD 799
Cdd:COG1196 671 LAALLEAEAELEELAERLAEEELELEEALLAEEEEER------ELAEAEEERLEEELEEEALEEQLEAEREELLEELLEE 744
|
570 580 590
....*....|....*....|....*....|....*..
gi 47059089 800 LETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEK 836
Cdd:COG1196 745 EELLEEEALEELPEPPDLEELERELERLEREIEALGP 781
|
|
| HkD_Hook |
cd22222 |
Hook domain found in Hook family of microtubule-binding proteins; The Hook family includes ... |
17-162 |
4.08e-26 |
|
Hook domain found in Hook family of microtubule-binding proteins; The Hook family includes Hook1-3. Hook1 is a microtubule-binding protein required for spermatid differentiation. Hook2, also a microtubule-binding protein, contributes to the establishment and maintenance of centrosome function. It may function in the positioning or formation of aggresomes, which are pericentriolar accumulations of misfolded proteins, proteasomes and chaperones. Hook3 is an adaptor protein for microtubule-dependent intracellular vesicle and protein trafficking. It is involved in Golgi and endosome transport. It acts as a scaffold for the opposite-polarity microtubule-based motors cytoplasmic dynein-1 and the kinesin KIF1C. It may participate in the turnover of the endocytosed scavenger receptor. Hook proteins are components of the FTS/Hook/FHIP complex (FHF complex), which may function to promote vesicle trafficking and/or fusion via the homotypic vesicular protein sorting (HOPS) complex. Hook adaptor proteins share an N-terminal conserved globular Hook domain, which folds as a variant of the helical calponin homology (CH) domain, and contacts the helix alpha1 of dynein light intermediate chain 1 (LIC1) in a hydrophobic groove.
Pssm-ID: 411793 Cd Length: 147 Bit Score: 105.79 E-value: 4.08e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 17 LVTWVKTFgSFGSGHQDnltlYMDLVDGIFLNQIMLQIDPRPSNQ----RINKHVNNDVNLRIQNLSILVRNIKTYYQEV 92
Cdd:cd22222 4 LLQWLQTF-NLIAPHAT----AEDLSDGVAIAQVLNQIDPEYFSDswlsKIKPDVGDNWRLKVSNLKKILKGIVDYYSEV 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47059089 93 L-QQLIVMNLPNVLMIGKDplsgKSMEEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEV 162
Cdd:cd22222 79 LgQQISGFTMPDVNAIAEK----EDPKELGRLLQLVLGCAVNCERKEEYIQAIMGLEESVQHVVMEAIQEL 145
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
255-875 |
2.29e-24 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 111.95 E-value: 2.29e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 255 ELADTKARLRRV---RQELE----------EKTEQLADTRHEVDQLVLELQKAKQDNIQlaADARSARAYRDELDSLREK 321
Cdd:COG1196 180 KLEATEENLERLediLGELErqleplerqaEKAERYRELKEELKELEAELLLLKLRELE--AELEELEAELEELEAELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 322 AN-RVERLEMDLVRCKEKLHDVDfykARMEELREDNIILIETKAMLEEQLTASRARSdkvHELEKENLQLKSKLHDLELD 400
Cdd:COG1196 258 LEaELAELEAELEELRLELEELE---LELEEAQAEEYELLAELARLEQDIARLEERR---RELEERLEELEEELAELEEE 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 401 RDADKKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSFVFELNEcASSRILKLEKENQSLQSTIQ 480
Cdd:COG1196 332 LEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLE-ALRAAAELAAQLEELEEAEE 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 481 GLRDTSLALEEsslkygelekENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLE 560
Cdd:COG1196 411 ALLERLERLEE----------ELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 561 QEKGHLHQAvwslreRPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQ-QLHRDLEEAKEKGEQAEALEKELHRLEK 639
Cdd:COG1196 481 ELLEELAEA------AARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAvAVLIGVEAAYEAALEAALAAALQNIVVE 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 640 ENEQLTKEVTSLKAATEKVEALehqsqgLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRFTSAK 719
Cdd:COG1196 555 DDEVAAAAIEYLKAAKAGRATF------LPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 720 MAQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLEssthksQALQRELSQLEAERQALRRD 799
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELE------ELAERLAEEELELEEALLAE 702
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47059089 800 LETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELAR 875
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
252-1077 |
3.38e-24 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 111.31 E-value: 3.38e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 252 LAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARS-----ARAYRDEL----------- 315
Cdd:TIGR02169 228 LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDlgeeeQLRVKEKIgeleaeiasle 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 316 DSLREKANRVERLEMDLVRCKEKLHDvdfYKARMEELREDniilIETKAMLEEQLTASRARSDKVHELEKENLQLKSKLH 395
Cdd:TIGR02169 308 RSIAEKERELEDAEERLAKLEAEIDK---LLAEIEELERE----IEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 396 DLELDRDAD-KKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLskNADLSDASRKsfVFELNECASSRILKLEKENQS 474
Cdd:TIGR02169 381 AETRDELKDyREKLEKLKREINELKRELDRLQEELQRLSEELADL--NAAIAGIEAK--INELEEEKEDKALEIKKQEWK 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 475 LQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQ---LEREKQSNQDLETLSEELIRekeqlqsGMEALKAD 551
Cdd:TIGR02169 457 LEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQaraSEERVRGGRAVEEVLKASIQ-------GVHGTVAQ 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 552 ----RARQIKDLEQEKGHLHQAVwslrerpqVNSTKDVEKEnrALHQAVTEAGSKLSQLELEK-QQLHRDLEEAKEKGEQ 626
Cdd:TIGR02169 530 lgsvGERYATAIEVAAGNRLNNV--------VVEDDAVAKE--AIELLKRRKAGRATFLPLNKmRDERRDLSILSEDGVI 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 627 AEALEkeLHRLEKENEQLTKEV---TSLKAATEKVEALEHQSQGLELENRSLRKSlDTLQNVSVQLEGLERDKQQLGQEN 703
Cdd:TIGR02169 600 GFAVD--LVEFDPKYEPAFKYVfgdTLVVEDIEAARRLMGKYRMVTLEGELFEKS-GAMTGGSRAPRGGILFSRSEPAEL 676
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 704 LELRKMVEAMRftsAKMAQIETENRQLEREKEELRRdveLLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQ 783
Cdd:TIGR02169 677 QRLRERLEGLK---RELSSLQSELRRIENRLDELSQ---ELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 784 RELSQLEAERQALRRDLETLQLTHKQLEGAEED--RKALEQEVAQLEKDKKLLEKEARRLwqqvelkDAILDDSAAKLsa 861
Cdd:TIGR02169 751 QEIENVKSELKELEARIEELEEDLHKLEEALNDleARLSHSRIPEIQAELSKLEEEVSRI-------EARLREIEQKL-- 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 862 aekESRALDKELARcrdvgSKLKELEKDNRDLTKQVTMHTRTLTTLREDLvlEKLKSQQLSSELDKLSQELEKVGLSKDL 941
Cdd:TIGR02169 822 ---NRLTLEKEYLE-----KEIQELQEQRIDLKEQIKSIEKEIENLNGKK--EELEEELEELEAALRDLESRLGDLKKER 891
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 942 llqeddghgdgkgkteSALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLrqtqeggDKAQNALKRPPG 1021
Cdd:TIGR02169 892 ----------------DELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEI-------EDPKGEDEEIPE 948
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47059089 1022 KVTS-----------HQEKEAWEPSHKEATMELLRVKDRAIELERSNAALQAERQLLKEQLQHLETQ 1077
Cdd:TIGR02169 949 EELSledvqaelqrvEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
673-1380 |
1.42e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 109.38 E-value: 1.42e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 673 RSLRKSLDTLQNVSVQLEGLERDKQQLgqENLELRkmVEAMRFTSAKmAQIETENRQLEREKEELRRDVELLKTLSKKSE 752
Cdd:TIGR02168 196 NELERQLKSLERQAEKAERYKELKAEL--RELELA--LLVLRLEELR-EELEELQEELKEAEEELEELTAELQELEEKLE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 753 RLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLthkQLEGAEEDRKALEQEVAQLEKDKK 832
Cdd:TIGR02168 271 ELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEA---QLEELESKLDELAEELAELEEKLE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 833 LLEKEarrlwqqVELKDAILDDSAAKLSAAEKESRALDKElarcrdvgskLKELEKDNRDLTKQVTMHTRTLTTLREDLv 912
Cdd:TIGR02168 348 ELKEE-------LESLEAELEELEAELEELESRLEELEEQ----------LETLRSKVAQLELQIASLNNEIERLEARL- 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 913 leklksQQLSSELDKLSQELEKVGLSKDLL-LQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIE 991
Cdd:TIGR02168 410 ------ERLEDRRERLQQEIEELLKKLEEAeLKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERE 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 992 LQ-------MIKKEHEQLRQTQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLRVKDRAIELERSNAALQA-- 1062
Cdd:TIGR02168 484 LAqlqarldSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAia 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1063 -------------------ERQLLKEQLQHLETQNvSFSSQILTLQKQSAFLQEH----------TTTLQTQTAKL---- 1109
Cdd:TIGR02168 564 flkqnelgrvtflpldsikGTEIQGNDREILKNIE-GFLGVAKDLVKFDPKLRKAlsyllggvlvVDDLDNALELAkklr 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1110 ------------------------QVENSTLSSQN--AALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHK 1163
Cdd:TIGR02168 643 pgyrivtldgdlvrpggvitggsaKTNSSILERRReiEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1164 HLGTLYECQSSEYEALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKAELEELEKVLSTEREALEREQKTNAIATSENQ 1243
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALR 802
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1244 R----LRGELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSRWQVRFDELKEQHQSMDISLTKMDNHCELLSRLK 1319
Cdd:TIGR02168 803 EaldeLRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNER 882
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47059089 1320 GNLEEENHHLLSQIQLLSQQNQMLLEQNMESKEQYHEEQkqyiDKLNALRRHKEKLEEKIM 1380
Cdd:TIGR02168 883 ASLEEALALLRSELEELSEELRELESKRSELRRELEELR----EKLAQLELRLEGLEVRID 939
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
505-1379 |
1.76e-23 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 109.00 E-value: 1.76e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 505 QLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSgmEALKADRarqIKDLEQEKGHLHQAVWSLRERPQVNSTKD 584
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRR--EREKAER---YQALLKEKREYEGYELLKEKEALERQKEA 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 585 VEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEK-----GEQAEALEKELHRLEKENEQLtkeVTSLKAATEKVE 659
Cdd:TIGR02169 242 IERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKikdlgEEEQLRVKEKIGELEAEIASL---ERSIAEKERELE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 660 ALEHQSQGLELEnrsLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRftsAKMAQIETENR----------- 728
Cdd:TIGR02169 319 DAEERLAKLEAE---IDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLR---AELEEVDKEFAetrdelkdyre 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 729 ---QLEREKEELRRDV----ELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLE 801
Cdd:TIGR02169 393 kleKLKREINELKRELdrlqEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELY 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 802 TLQLTHKQLEgaeEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDD---SAAKLSAAeKESRALDKELArcrd 878
Cdd:TIGR02169 473 DLKEEYDRVE---KELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGvhgTVAQLGSV-GERYATAIEVA---- 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 879 VGSKLKELEKDNRDLTKQVTMHTRTLTTLRED-LVLEKLKSQQlsSELDKLSQElEKVGLSKDLLLQEDdghgdgkgKTE 957
Cdd:TIGR02169 545 AGNRLNNVVVEDDAVAKEAIELLKRRKAGRATfLPLNKMRDER--RDLSILSED-GVIGFAVDLVEFDP--------KYE 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 958 SALKttlamkeekIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLrqtQEGGDKAQNALKRPPGKVTSHQEKEawepshk 1037
Cdd:TIGR02169 614 PAFK---------YVFGDTLVVEDIEAARRLMGKYRMVTLEGELF---EKSGAMTGGSRAPRGGILFSRSEPA------- 674
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1038 eatmELLRVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLS 1117
Cdd:TIGR02169 675 ----ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1118 SQNAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVY--EALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRNLEL 1195
Cdd:TIGR02169 751 QEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLshSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEY 830
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1196 ---EHKELGERHGDLQQRKAELEELEKVLSTEREALEREQKtnaiatsenqRLRGELDRISFLHQQLKGEYEELHAHTKE 1272
Cdd:TIGR02169 831 lekEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELE----------ELEAALRDLESRLGDLKKERDELEAQLRE 900
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1273 LKTSLNNSQLELSRWQVRFDELKEQHQSMDISLTKMDnhcellsRLKGNLEEENHHLLS------QIQLLSQQNQMLLEQ 1346
Cdd:TIGR02169 901 LERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIE-------DPKGEDEEIPEEELSledvqaELQRVEEEIRALEPV 973
|
890 900 910
....*....|....*....|....*....|....*.
gi 47059089 1347 NMESKEQYHEEQKQYID---KLNALRRHKEKLEEKI 1379
Cdd:TIGR02169 974 NMLAIQEYEEVLKRLDElkeKRAKLEEERKAILERI 1009
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
253-933 |
5.35e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 104.37 E-value: 5.35e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 253 AVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQD----NIQLAADARSARAYRDELDSLrekANRVERL 328
Cdd:TIGR02168 224 ELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKleelRLEVSELEEEIEELQKELYAL---ANEISRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 329 EMDLVRCKEKLHDVD----FYKARMEELREDNIILIETKAMLEEQLTASRARSDkvhELEKENLQLKSKLHDLELDRDAD 404
Cdd:TIGR02168 301 EQQKQILRERLANLErqleELEAQLEELESKLDELAEELAELEEKLEELKEELE---SLEAELEELEAELEELESRLEEL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 405 KKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSFVFELNECASSRI-LKLEKENQSLQSTIQGLR 483
Cdd:TIGR02168 378 EEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELqAELEELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 484 DTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSE--------------------ELIREKEQLQS 543
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEgvkallknqsglsgilgvlsELISVDEGYEA 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 544 GMEALKADRARQI--KDLEQEK---GHLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQ--QLHRD 616
Cdd:TIGR02168 538 AIEAALGGRLQAVvvENLNAAKkaiAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFdpKLRKA 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 617 LEEA------KEKGEQAEALEKELHRLE---------------------KENEQLTKEVTSLKAATEKVEALEHQSQGLE 669
Cdd:TIGR02168 618 LSYLlggvlvVDDLDNALELAKKLRPGYrivtldgdlvrpggvitggsaKTNSSILERRREIEELEEKIEELEEKIAELE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 670 LENRSLRKSLDTLQNVSVQLEGLERDK-QQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVE----LL 744
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELsRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEeaeeEL 777
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 745 KTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLE----TLQLTHKQLEGAEEDRKAL 820
Cdd:TIGR02168 778 AEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAaterRLEDLEEQIEELSEDIESL 857
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 821 EQEVAQLEKDK-------KLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELARCRDvgsklkELEKDNRDL 893
Cdd:TIGR02168 858 AAEIEELEELIeeleselEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELRE------KLAQLELRL 931
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 47059089 894 TKQVTMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELE 933
Cdd:TIGR02168 932 EGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEAR 971
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
491-1229 |
1.77e-21 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 102.45 E-value: 1.77e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 491 ESSLKYGELEKENQQ-----LSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADR---ARQIKDLEQE 562
Cdd:TIGR02169 208 EKAERYQALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLeelNKKIKDLGEE 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 563 kghlhqavwslrERPQVNST-KDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEkgeQAEALEKELHRLEKEN 641
Cdd:TIGR02169 288 ------------EQLRVKEKiGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA---EIEELEREIEEERKRR 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 642 EQLTKEVTSLKaatEKVEALEHQSQGLELENRSLRKSLDTLQnvsVQLEGLERDKQQLGQE----NLELRKMVEAMRFTS 717
Cdd:TIGR02169 353 DKLTEEYAELK---EELEDLRAELEEVDKEFAETRDELKDYR---EKLEKLKREINELKREldrlQEELQRLSEELADLN 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 718 AKMAQIETENRQLEREKEELRRDVEL----LKTLSKKSERLELSYQSVSAENLQLQHSLESsthksqaLQRELSQLEAER 793
Cdd:TIGR02169 427 AAIAGIEAKINELEEEKEDKALEIKKqewkLEQLAADLSKYEQELYDLKEEYDRVEKELSK-------LQRELAEAEAQA 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 794 QALRRDLETLQLTHKQLEgaeEDRKALEQEVAQL----EKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRAL 869
Cdd:TIGR02169 500 RASEERVRGGRAVEEVLK---ASIQGVHGTVAQLgsvgERYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRAT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 870 DKELARCRDVGSKLKELEKDN-----------------------------------RDLTKQVTMHT------------- 901
Cdd:TIGR02169 577 FLPLNKMRDERRDLSILSEDGvigfavdlvefdpkyepafkyvfgdtlvvedieaaRRLMGKYRMVTlegelfeksgamt 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 902 ---RTLTTLREDLVLEKLKSQQLSSELDKLSQELE----KVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEkivfL 974
Cdd:TIGR02169 657 ggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSslqsELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQE----E 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 975 EAQVEEKESLSRQLQI----------ELQMIKKEHEQLRQTQEGGDKAQNALKRPPgkvtSHQEKEAWEPSHKEATMELL 1044
Cdd:TIGR02169 733 EKLKERLEELEEDLSSleqeienvksELKELEARIEELEEDLHKLEEALNDLEARL----SHSRIPEIQAELSKLEEEVS 808
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1045 RVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALS 1124
Cdd:TIGR02169 809 RIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLK 888
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1125 -------AQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRnLELEH 1197
Cdd:TIGR02169 889 kerdeleAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQR-VEEEI 967
|
810 820 830
....*....|....*....|....*....|....*....
gi 47059089 1198 KELG-------ERHGDLQQRKAELEELEKVLSTEREALE 1229
Cdd:TIGR02169 968 RALEpvnmlaiQEYEEVLKRLDELKEKRAKLEEERKAIL 1006
|
|
| HOOK_N |
pfam19047 |
HOOK domain; This domain is found at the N-terminus of HOOK proteins. |
17-162 |
1.88e-21 |
|
HOOK domain; This domain is found at the N-terminus of HOOK proteins.
Pssm-ID: 465958 Cd Length: 151 Bit Score: 92.86 E-value: 1.88e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 17 LVTWVKTFgSFGSGHQDnltlYMDLVDGIFLNQIMLQIDPRPSN----QRINKHVNNDVNLRIQNLSILVRNIKTYYQEV 92
Cdd:pfam19047 6 LLTWLQTF-NVPAPCAT----VEDLTDGVAMAQVLHQIDPSWFTeawlSRIKEDVGDNWRLKVSNLKKILQSVVDYYQDV 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 93 L-QQLIVMNLPNVLMIGK--DPlsgksmEEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEV 162
Cdd:pfam19047 81 LgQQISDFLLPDVNLIGEhsDP------AELGRLLQLILGCAVNCEKKQEYIQQIMTLEESVQHVVMTAIQEL 147
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
464-1075 |
2.30e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 101.94 E-value: 2.30e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 464 RILKLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQS 543
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 544 GMEALKADRARQIKDLEQEKGHLHQAvwslrerpqvnstkdvEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEK 623
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEEL----------------EEELAELEEELEELEEELEELEEELEEAEEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 624 GEQAEALEKELHRLEKENEQltkevtslKAATEKVEALEHQSQGLELENRslrksldtLQNVSVQLEGLERDKQQLGQEN 703
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEE--------ELEELAEELLEALRAAAELAAQ--------LEELEEAEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 704 LELRKMVEAMRftsakmAQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQ 783
Cdd:COG1196 424 EELEEALAELE------EEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 784 RELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVA-----------QLEKDKKLLEKEARRLWQQVELKDAIL 852
Cdd:COG1196 498 EAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAleaalaaalqnIVVEDDEVAAAAIEYLKAAKAGRATFL 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 853 DDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNRDLtkQVTMHTRTLTTLREDLVLEKLKsqqlsseldKLSQEL 932
Cdd:COG1196 578 PLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVL--GDTLLGRTLVAARLEAALRRAV---------TLAGRL 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 933 EKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKA 1012
Cdd:COG1196 647 REVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEAL 726
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 1013 QNALKRppgkVTSHQEKEAWEPSHkeatmELLRVKDRAIELERSNAALQAERQLLKEQLQHLE 1075
Cdd:COG1196 727 EEQLEA----EREELLEELLEEEE-----LLEEEALEELPEPPDLEELERELERLEREIEALG 780
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
255-835 |
2.02e-20 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 98.98 E-value: 2.02e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 255 ELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELqkakqdnIQLAADARSARAYRDELDSLREKANRVERLEMDLVR 334
Cdd:PRK03918 180 RLEKFIKRTENIEELIKEKEKELEEVLREINEISSEL-------PELREELEKLEKEVKELEELKEEIEELEKELESLEG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 335 CKEKLhdvdfyKARMEELREDniilIETKAMLEEQLTASRARSDKVHELEKENLQLKsKLHDLELDRdadKKQIEKLLEE 414
Cdd:PRK03918 253 SKRKL------EEKIRELEER----IEELKKEIEELEEKVKELKELKEKAEEYIKLS-EFYEEYLDE---LREIEKRLSR 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 415 YMVLEMAQKQSMKESAHLGWELEQLSKnaDLSDASRKSFVFELNECASSRILKLEKENQSLQStiqglRDTSLALEESSL 494
Cdd:PRK03918 319 LEEEINGIEERIKELEEKEERLEELKK--KLKELEKRLEELEERHELYEEAKAKKEELERLKK-----RLTGLTPEKLEK 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 495 KYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREK--------EQLQSGMEALKADRARQIKDLEQEKGHL 566
Cdd:PRK03918 392 ELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKgkcpvcgrELTEEHRKELLEEYTAELKRIEKELKEI 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 567 HQAVWSLRER-PQVNSTKDVEKENRALHQAVTEAgsklsqLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLT 645
Cdd:PRK03918 472 EEKERKLRKElRELEKVLKKESELIKLKELAEQL------KELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLK 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 646 KEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVqlEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIET 725
Cdd:PRK03918 546 KELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESV--EELEERLKELEPFYNEYLELKDAEKELEREEKELKK 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 726 ENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENLQlqhslesstHKSQALQRELSQLEAERQALRRDLETLQL 805
Cdd:PRK03918 624 LEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELR---------EEYLELSRELAGLRAELEELEKRREEIKK 694
|
570 580 590
....*....|....*....|....*....|
gi 47059089 806 THKQLEGAEEDRKALEQEVAQLEKDKKLLE 835
Cdd:PRK03918 695 TLEKLKEELEEREKAKKELEKLEKALERVE 724
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
367-989 |
2.11e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 98.86 E-value: 2.11e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 367 EEQLTASRAR----SDKVHELEKenlQLKSklhdleLDRDADKKqiekllEEYMVLEMAQKQsmKESAHLGWELEQLSKN 442
Cdd:COG1196 178 ERKLEATEENlerlEDILGELER---QLEP------LERQAEKA------ERYRELKEELKE--LEAELLLLKLRELEAE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 443 ADLSDASRKSfvfelnecASSRILKLEKENQSLQSTIQGLRdtsLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQ 522
Cdd:COG1196 241 LEELEAELEE--------LEAELEELEAELAELEAELEELR---LELEELELELEEAQAEEYELLAELARLEQDIARLEE 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 523 SNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRErpqvnSTKDVEKENRALHQAVTEAGSK 602
Cdd:COG1196 310 RRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE-----AEEALLEAEAELAEAEEELEEL 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 603 LSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKE----NEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKS 678
Cdd:COG1196 385 AEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEleelEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLEL 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 679 LDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMR------FTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSE 752
Cdd:COG1196 465 LAELLEEAALLEAALAELLEELAEAAARLLLLLEAEadyegfLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAL 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 753 RLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALE----------- 821
Cdd:COG1196 545 AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADAryyvlgdtllg 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 822 --QEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNRDLTKQVTM 899
Cdd:COG1196 625 rtLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEE 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 900 HTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFL----- 974
Cdd:COG1196 705 EERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALgpvnl 784
|
650 660
....*....|....*....|.
gi 47059089 975 ------EAQVEEKESLSRQLQ 989
Cdd:COG1196 785 laieeyEELEERYDFLSEQRE 805
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
688-1297 |
1.74e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 95.77 E-value: 1.74e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 688 QLEGLERDK------QQLGQE--NLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKT----LSKKSERLE 755
Cdd:COG1196 201 QLEPLERQAekaeryRELKEElkELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAeleeLRLELEELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 756 LSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKDKKLLE 835
Cdd:COG1196 281 LELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE---EELEELEEELEELEEELEEAEEELEEAE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 836 KEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELARCRdvgSKLKELEKDNRDLTKQVTMHTRTLTTLREDLvlek 915
Cdd:COG1196 358 AELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA---AQLEELEEAEEALLERLERLEEELEELEEAL---- 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 916 lksQQLSSELDKLSQELEKVGLSKDLLLQEddghgdgkgktESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMI 995
Cdd:COG1196 431 ---AELEEEEEEEEEALEEAAEEEAELEEE-----------EEALLELLAELLEEAALLEAALAELLEELAEAAARLLLL 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 996 KKEHEQLRQTQEGGdKAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLRVKDRAIELERSNAALQAERQLLKEQLQHLE 1075
Cdd:COG1196 497 LEAEADYEGFLEGV-KAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRAT 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1076 TQnvsfssqILTLQKQSAFLQEHTTTLQTQTAKLQVEnstlsSQNAALSAQYTVLQSQQAAKEAEHEGLqqqqeqLAAVY 1155
Cdd:COG1196 576 FL-------PLDKIRARAALAAALARGAIGAAVDLVA-----SDLREADARYYVLGDTLLGRTLVAARL------EAALR 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1156 EALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKAELEELEKVLSTEREALEREQKTN 1235
Cdd:COG1196 638 RAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERL 717
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47059089 1236 AIATSENQRLRGELDRISFLHQQLKGEYEELHAHTKELKTSLnnsqLELSRWQVRFDELKEQ 1297
Cdd:COG1196 718 EEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEP----PDLEELERELERLERE 775
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
247-1310 |
1.85e-19 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 96.01 E-value: 1.85e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKqdniQLAADARSARAyrdeldslrEKANRVE 326
Cdd:pfam01576 5 EEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAET----ELCAEAEEMRA---------RLAARKQ 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 327 RLEmdlvrckEKLHDVDfykARMEELREDNIIL-IETKAM------LEEQLTASRARSDKVHeLEKENLQLKSKLHD--- 396
Cdd:pfam01576 72 ELE-------EILHELE---SRLEEEEERSQQLqNEKKKMqqhiqdLEEQLDEEEAARQKLQ-LEKVTTEAKIKKLEedi 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 397 LELDRDADKKQIEKLLEEYMVLEMaqkqsmkeSAHLGWElEQLSKNADLSDASRKSFVFELNEcassRILKLEKENQSLQ 476
Cdd:pfam01576 141 LLLEDQNSKLSKERKLLEERISEF--------TSNLAEE-EEKAKSLSKLKNKHEAMISDLEE----RLKKEEKGRQELE 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 477 STIQGLRDTSLALEESSLKY-GELEKENQQLSKKIEKLQTQLER-EKQSNQDLETLSEelIREKE----QLQSGMEALKA 550
Cdd:pfam01576 208 KAKRKLEGESTDLQEQIAELqAQIAELRAQLAKKEEELQAALARlEEETAQKNNALKK--IRELEaqisELQEDLESERA 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 551 DRAR---QIKDLEQE----KGHL---------HQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLelekqqlh 614
Cdd:pfam01576 286 ARNKaekQRRDLGEElealKTELedtldttaaQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQA-------- 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 615 rdLEEAKEKGEQAE----ALEKELHRLEKENEQLTKEVTSLKAATEKVealEHQSQGLELEnrslrksldtLQNVSVQLE 690
Cdd:pfam01576 358 --LEELTEQLEQAKrnkaNLEKAKQALESENAELQAELRTLQQAKQDS---EHKRKKLEGQ----------LQELQARLS 422
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 691 GLERDKQQLGQENLELRKMVEAMrftSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQS----VSAENL 766
Cdd:pfam01576 423 ESERQRAELAEKLSKLQSELESV---SSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTrlrqLEDERN 499
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 767 QLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLThkqLEGAEEDRKALEQEVAQL-------EKDKKLLEKEAR 839
Cdd:pfam01576 500 SLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGT---LEALEEGKKRLQRELEALtqqleekAAAYDKLEKTKN 576
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 840 RLWQQVELKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKE---------LEKDNRDLT------------KQVT 898
Cdd:pfam01576 577 RLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEerdraeaeaREKETRALSlaraleealeakEELE 656
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 899 MHTRTLTTLREDLVLEKLKSQQLSSELDK----LSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFL 974
Cdd:pfam01576 657 RTNKQLRAEMEDLVSSKDDVGKNVHELERskraLEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKAQFERDLQAR 736
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 975 EAQVEEK-ESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRPPGKVtshqekEAWEPSHKEATMELLRVKDRAIEL 1053
Cdd:pfam01576 737 DEQGEEKrRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQI------DAANKGREEAVKQLKKLQAQMKDL 810
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1054 ERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQ 1133
Cdd:pfam01576 811 QRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEAR 890
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1134 QAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYecqSSEYEALIRQHSCLKTLHR-NLELEHKeLGERHGDLQQR-K 1211
Cdd:pfam01576 891 IAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTEL---AAERSTSQKSESARQQLERqNKELKAK-LQEMEGTVKSKfK 966
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1212 AELEELEKVLSTEREALEREQKTNAIATSENQRLRGELDRISFL-------HQQLKGEYEELHAHTKELKTSLNNSQLEL 1284
Cdd:pfam01576 967 SSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQvederrhADQYKDQAEKGNSRMKQLKRQLEEAEEEA 1046
|
1130 1140 1150
....*....|....*....|....*....|...
gi 47059089 1285 SR-------WQVRFDELKEQHQSMDISLTKMDN 1310
Cdd:pfam01576 1047 SRanaarrkLQRELDDATESNESMNREVSTLKS 1079
|
|
| HkD_Hook2 |
cd22227 |
Hook domain found in protein Hook 2 (Hook2) and similar proteins; Hook2 is a ... |
17-162 |
7.38e-19 |
|
Hook domain found in protein Hook 2 (Hook2) and similar proteins; Hook2 is a microtubule-binding protein that contributes to the establishment and maintenance of centrosome function. It may function in the positioning or formation of aggresomes, which are pericentriolar accumulations of misfolded proteins, proteasomes and chaperones. Hook2 is a component of the FTS/Hook/FHIP complex (FHF complex), which may function to promote vesicle trafficking and/or fusion via the homotypic vesicular protein sorting (HOPS) complex.
Pssm-ID: 411798 Cd Length: 150 Bit Score: 85.31 E-value: 7.38e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 17 LVTWVKTFGSFGSGHQdnltlYMDLVDGIFLNQIMLQIDPRPSN----QRINKHVNNDVNLRIQNLSILVRNIKTYYQEV 92
Cdd:cd22227 6 LLTWLQTFQVPSPCSS-----YQDLTSGVAIAQVLNRIDPSWFNeawlGRIKEDTGDNWRLKVSNLKKILQSLLEYYQDV 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 93 L-QQLIVMNLPNVLMIGK--DPLsgksmeEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEV 162
Cdd:cd22227 81 LgHQVSEDHLPDVNLIGEfsDDT------ELGKLLQLVLGCAISCEKKQEHIQQIMTLEESVQHVVMEAIQEL 147
|
|
| HkD_Hook3 |
cd22226 |
Hook domain found in protein Hook 3 (Hook3) and similar proteins; Hook3 is an adaptor protein ... |
17-162 |
7.79e-19 |
|
Hook domain found in protein Hook 3 (Hook3) and similar proteins; Hook3 is an adaptor protein for microtubule-dependent intracellular vesicle and protein trafficking. It is involved in Golgi and endosome transport. It acts as a scaffold for the opposite-polarity microtubule-based motors cytoplasmic dynein-1 and the kinesin KIF1C. It may participate in the turnover of the endocytosed scavenger receptor. Hook3 is a component of the FTS/Hook/FHIP complex (FHF complex), which may function to promote vesicle trafficking and/or fusion via the homotypic vesicular protein sorting (HOPS) complex.
Pssm-ID: 411797 Cd Length: 153 Bit Score: 85.41 E-value: 7.79e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 17 LVTWVKTFGSfgsghQDNLTLYMDLVDGIFLNQIMLQIDPRPSNQ----RINKHVNNDVNLRIQNLSILVRNIKTYYQEV 92
Cdd:cd22226 9 LLTWIQTFNV-----DAPCQTVEDLTSGVVMAQVLQKIDPAYFDEnwlnRIKTEVGDNWRLKISNLKKILKGILDYNHEI 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47059089 93 L-QQLIVMNLPNVLMIGKDPLSGksmeEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEV 162
Cdd:cd22226 84 LgQQINDFTLPDVNLIGEHSDAA----ELGRMLQLILGCAVNCEQKQEYIQTIMMMEESVQHVVMTAIQEL 150
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
495-1017 |
1.88e-18 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 92.01 E-value: 1.88e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 495 KYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRA---RQIKDLEQEKGHLHQAVW 571
Cdd:TIGR04523 125 ELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLniqKNIDKIKNKLLKLELLLS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 572 SLRERPQVNST-----KDVEKENRALHQAVTEAGSKLSQLELE----KQQLHRDLEEAKEKGEQAEALEKELHRLEKENE 642
Cdd:TIGR04523 205 NLKKKIQKNKSlesqiSELKKQNNQLKDNIEKKQQEINEKTTEisntQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIK 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 643 QLTKEVTSLKAateKVEALEHQSQ-----GLELENRSLRKSLDTLQN-----------VSVQLEGLERDKQQLGQENLEL 706
Cdd:TIGR04523 285 ELEKQLNQLKS---EISDLNNQKEqdwnkELKSELKNQEKKLEEIQNqisqnnkiisqLNEQISQLKKELTNSESENSEK 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 707 RKmveamrftsakmaQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESsthksqaLQREL 786
Cdd:TIGR04523 362 QR-------------ELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKK-------LQQEK 421
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 787 SQLEAERQALRRDLETLQLTHKQLEGAEEDR----KALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAA 862
Cdd:TIGR04523 422 ELLEKEIERLKETIIKNNSEIKDLTNQDSVKeliiKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 863 EKESRALDKELArcrDVGSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEK--LKSQQLSSELDKLSQELEKVGLSKD 940
Cdd:TIGR04523 502 NEEKKELEEKVK---DLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDfeLKKENLEKEIDEKNKEIEELKQTQK 578
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47059089 941 LLLqeddghgdgkgKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALK 1017
Cdd:TIGR04523 579 SLK-----------KKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLK 644
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
248-876 |
5.11e-18 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 91.28 E-value: 5.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 248 DKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLaadarsARAYRDELDSLREKANRVER 327
Cdd:TIGR02169 351 RRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINEL------KRELDRLQEELQRLSEELAD 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 328 LEMDLVRCKEKLHDVD-FYKARMEELREDNIILIETKAMLEEQLTASRARSDKVHELEKENLQLKSKLHDLELDRDADKK 406
Cdd:TIGR02169 425 LNAAIAGIEAKINELEeEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEE 504
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 407 QIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSFVFELNECASSRILKLEKENQSLQSTI------- 479
Cdd:TIGR02169 505 RVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRATFlplnkmr 584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 480 QGLRDTSLALEESSLKYG----ELEKENQQLSKKI-------EKLQTQleREKQSNQDLETLSEELI------------- 535
Cdd:TIGR02169 585 DERRDLSILSEDGVIGFAvdlvEFDPKYEPAFKYVfgdtlvvEDIEAA--RRLMGKYRMVTLEGELFeksgamtggsrap 662
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 536 --------REKEQLQS---GMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQvnSTKDVEKENRALHQAVTEAGSKLS 604
Cdd:TIGR02169 663 rggilfsrSEPAELQRlreRLEGLKRELSSLQSELRRIENRLDELSQELSDASR--KIGEIEKEIEQLEQEEEKLKERLE 740
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 605 QLELEKQQLHRDLEEAKEKgeqAEALEKELHRLEKENEQLTKEVTSLKA--ATEKVEALEHQSQGLELENRSLRKSLDT- 681
Cdd:TIGR02169 741 ELEEDLSSLEQEIENVKSE---LKELEARIEELEEDLHKLEEALNDLEArlSHSRIPEIQAELSKLEEEVSRIEARLREi 817
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 682 ---LQNVSVQLEGLERDKQQLGQENLEL---RKMVEA--------MRFTSAKMAQIETENRQLEREKEELRRDVELLKtl 747
Cdd:TIGR02169 818 eqkLNRLTLEKEYLEKEIQELQEQRIDLkeqIKSIEKeienlngkKEELEEELEELEAALRDLESRLGDLKKERDELE-- 895
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 748 sKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQlthkQLEGAEEDRKALEQEVAQL 827
Cdd:TIGR02169 896 -AQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEEL----SLEDVQAELQRVEEEIRAL 970
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 47059089 828 EKDKKLLEkearrlwQQVELKDAILDDSAAKLSAAEKESRALDKELARC 876
Cdd:TIGR02169 971 EPVNMLAI-------QEYEEVLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
377-1112 |
7.19e-18 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 90.56 E-value: 7.19e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 377 SDKVHELEKENLQ-----LKSKLHDLELDRDA--DKKQIEKLLEEYMvlemaqKQSMKESAHlgwELEqlsknadlsdaS 449
Cdd:pfam15921 97 SNELHEKQKFYLRqsvidLQTKLQEMQMERDAmaDIRRRESQSQEDL------RNQLQNTVH---ELE-----------A 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 450 RKSFVFELNECASSRILKLEKENQSLQSTIQGLRDTSLALEESSLK-----------------------YGELEKENQQL 506
Cdd:pfam15921 157 AKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKkiyehdsmstmhfrslgsaiskiLRELDTEISYL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 507 SKKIEKLQTQLEREKQSNQDletlSEELIRekEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQVnSTKDVE 586
Cdd:pfam15921 237 KGRIFPVEDQLEALKSESQN----KIELLL--QQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEI-IQEQAR 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 587 KENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEAL-EKELHRLEKENEQLTKEVTSLKAATEKVEA-LEHQ 664
Cdd:pfam15921 310 NQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLaNSELTEARTERDQFSQESGNLDDQLQKLLAdLHKR 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 665 SQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRF-----TSAKMAQIETENR----------Q 729
Cdd:pfam15921 390 EKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSecqgqMERQMAAIQGKNEslekvssltaQ 469
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 730 LEREKEELRRDVEllkTLSKKSERLELSYQSVSaenlQLQHSLESSTHKSQALQRELSQLEAerqalRRDLETLQLTHKQ 809
Cdd:pfam15921 470 LESTKEMLRKVVE---ELTAKKMTLESSERTVS----DLTASLQEKERAIEATNAEITKLRS-----RVDLKLQELQHLK 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 810 LEGAEEDRKALEQEVAQLEKDKKllEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELarcRDVGSKLKELE-- 887
Cdd:pfam15921 538 NEGDHLRNVQTECEALKLQMAEK--DKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEI---NDRRLELQEFKil 612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 888 KDNRDltkqvtMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEKvglSKDLLLQEddghgdgkgkTESALKTTLAMK 967
Cdd:pfam15921 613 KDKKD------AKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQ---ERDQLLNE----------VKTSRNELNSLS 673
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 968 EEKIVF---LEAQVEEKESLSRQLQIELQMIKKEHEQLRQT---QEGGDKaqNALkrppgKVTSHQEKEAwepSHKEATM 1041
Cdd:pfam15921 674 EDYEVLkrnFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTlksMEGSDG--HAM-----KVAMGMQKQI---TAKRGQI 743
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47059089 1042 ELLRVKDRAIELERSNAA-----LQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVE 1112
Cdd:pfam15921 744 DALQSKIQFLEEAMTNANkekhfLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQ 819
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
601-1429 |
8.41e-18 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 90.51 E-value: 8.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 601 SKLSQLELEKQQLHRDLEEAKEKGEQAEALEKE----LHRLEKENEQLTKeVTSLKAATEKVEALEHQSQGLELEnRSLR 676
Cdd:TIGR02169 163 AGVAEFDRKKEKALEELEEVEENIERLDLIIDEkrqqLERLRREREKAER-YQALLKEKREYEGYELLKEKEALE-RQKE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 677 KSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEA-----MRFTSAKMAQIETENRQLEREKEELRRDVEL----LKTL 747
Cdd:TIGR02169 241 AIERQLASLEEELEKLTEEISELEKRLEEIEQLLEElnkkiKDLGEEEQLRVKEKIGELEAEIASLERSIAEkereLEDA 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 748 SKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEgaeEDRKALEQEVAQL 827
Cdd:TIGR02169 321 EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETR---DELKDYREKLEKL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 828 EKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEkesraldkelarcrdvgSKLKELEKDNRDLTKQVTMHTRTLTTL 907
Cdd:TIGR02169 398 KREINELKRELDRLQEELQRLSEELADLNAAIAGIE-----------------AKINELEEEKEDKALEIKKQEWKLEQL 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 908 REDLVLEKLKSQQLSSELDKLSQELEKvgLSKDLllqeddghgdgkgkteSALKTTLAMKEEKIVFLEAQVEEKESlsrq 987
Cdd:TIGR02169 461 AADLSKYEQELYDLKEEYDRVEKELSK--LQREL----------------AEAEAQARASEERVRGGRAVEEVLKA---- 518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 988 lqielqMIKKEHEQLRQTQEGGDKAQNALKRPPGkvtshqekeawepshkeATMELLRVKD-----RAIELERSNAA--- 1059
Cdd:TIGR02169 519 ------SIQGVHGTVAQLGSVGERYATAIEVAAG-----------------NRLNNVVVEDdavakEAIELLKRRKAgra 575
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1060 ----LQAERQLLKEQLQHLETQNVSFSSQILTLQKQ--SAFLQEHTTTLQTQ---TAKLQVENSTLSSQNAAL------- 1123
Cdd:TIGR02169 576 tflpLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKyePAFKYVFGDTLVVEdieAARRLMGKYRMVTLEGELfeksgam 655
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1124 ---SAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHsclktlhRNLELEHKEL 1200
Cdd:TIGR02169 656 tggSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKI-------GEIEKEIEQL 728
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1201 GERHGDLQQRKAELEELEKVLSTEREALEREQKTNAiatsenqrlrgelDRISFLHQQLKGEYEELhahtKELKTSLNNS 1280
Cdd:TIGR02169 729 EQEEEKLKERLEELEEDLSSLEQEIENVKSELKELE-------------ARIEELEEDLHKLEEAL----NDLEARLSHS 791
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1281 QLELSRWQVRfdELKEQHQSMDISLTKMDNHCELLSRLKGNLEEENHHLLSQIQLLSQQNQMLLEQ---------NMESK 1351
Cdd:TIGR02169 792 RIPEIQAELS--KLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEienlngkkeELEEE 869
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47059089 1352 EQYHE-EQKQYIDKLNALRRHKEKLEEKIMDQYKFYDPAPKKKNHwigAKALVKLIKPKKEGSRERLKSTTDSPPWQLE 1429
Cdd:TIGR02169 870 LEELEaALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEK---KRKRLSELKAKLEALEEELSEIEDPKGEDEE 945
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
183-936 |
4.22e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.19 E-value: 4.22e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 183 EELEALSRNM-VFHLRRLIDERDECTELIVDLTQERDYLQTQQPPSPGKFSSPDSTPSPTSSLSSE----------DKQH 251
Cdd:TIGR02168 220 AELRELELALlVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEElqkelyalanEISR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 252 LAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAAdarsarayrdELDSLREKANRVERLEMD 331
Cdd:TIGR02168 300 LEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKE----------ELESLEAELEELEAELEE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 332 LvrckeklhdvdfyKARMEELRedniilietkamlEEQLTASRARSDKVHELEKENLQ---LKSKLHDLELDRDADKKQI 408
Cdd:TIGR02168 370 L-------------ESRLEELE-------------EQLETLRSKVAQLELQIASLNNEierLEARLERLEDRRERLQQEI 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 409 EKLLEEYMVLEMAQKQSmkESAHLGWELEQLSKNADLSDASRKSFVFELNEcASSRILKLEKENQSLQSTIQGLRDTSLA 488
Cdd:TIGR02168 424 EELLKKLEEAELKELQA--ELEELEEELEELQEELERLEEALEELREELEE-AEQALDAAERELAQLQARLDSLERLQEN 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 489 LEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEE-----LIREKEQLQSGMEALK-------------- 549
Cdd:TIGR02168 501 LEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGrlqavVVENLNAAKKAIAFLKqnelgrvtflplds 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 550 ----ADRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKD--------VEKENRALHQA---------VTEAG-------- 600
Cdd:TIGR02168 581 ikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSyllggvlvVDDLDNALELAkklrpgyriVTLDGdlvrpggv 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 601 -----SKLSQLELEKQQLHRDLEEAKEKGE-QAEALEKELHRLEKENEQLTKEVTSLKAatekvealehQSQGLELENRS 674
Cdd:TIGR02168 661 itggsAKTNSSILERRREIEELEEKIEELEeKIAELEKALAELRKELEELEEELEQLRK----------ELEELSRQISA 730
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 675 LRKSLDTLQNVSVQLEglerdkQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDV----ELLKTLSKK 750
Cdd:TIGR02168 731 LRKDLARLEAEVEQLE------ERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIeqlkEELKALREA 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 751 SERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKD 830
Cdd:TIGR02168 805 LDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLA---AEIEELEELIEELESELEALLNE 881
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 831 KKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELArcrDVGSKLKELEKDNRDLTKQVTMHTRtlTTLRED 910
Cdd:TIGR02168 882 RASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLA---QLELRLEGLEVRIDNLQERLSEEYS--LTLEEA 956
|
810 820
....*....|....*....|....*....
gi 47059089 911 LVLE---KLKSQQLSSELDKLSQELEKVG 936
Cdd:TIGR02168 957 EALEnkiEDDEEEARRRLKRLENKIKELG 985
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
318-1025 |
6.20e-17 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 87.47 E-value: 6.20e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 318 LREKANRVERLEMDLVRCKEKLHDVDFYKARM-----EELREDNIILIETKA------MLEEQLTASRARSDKVHELEKE 386
Cdd:pfam05483 101 LKQKENKLQENRKIIEAQRKAIQELQFENEKVslkleEEIQENKDLIKENNAtrhlcnLLKETCARSAEKTKKYEYEREE 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 387 NLQLKSKLHDleldrdadkkQIEKLLEEYMVLEMaQKQSMKESAHLGWElEQLSKNADLSDASRKSFVFELNECASSRIL 466
Cdd:pfam05483 181 TRQVYMDLNN----------NIEKMILAFEELRV-QAENARLEMHFKLK-EDHEKIQHLEEEYKKEINDKEKQVSLLLIQ 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 467 KLEKENQslqstiqgLRDTSLALEESSLKYGELEkenqqlskkiEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGME 546
Cdd:pfam05483 249 ITEKENK--------MKDLTFLLEESRDKANQLE----------EKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMS 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 547 ALKAdrarqikdLEQEKGHLHQAVWSLRERPQVNsTKDVEKENRALHQAVTEAGSKLSQLElekqQLHRDLEEAKEKGE- 625
Cdd:pfam05483 311 TQKA--------LEEDLQIATKTICQLTEEKEAQ-MEELNKAKAAHSFVVTEFEATTCSLE----ELLRTEQQRLEKNEd 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 626 QAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQlgqENLE 705
Cdd:pfam05483 378 QLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREK---EIHD 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 706 LRKMVEAMRfTSAKMAQIETENRQLEREKEELRrDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRE 785
Cdd:pfam05483 455 LEIQLTAIK-TSEEHYLKEVEDLKTELEKEKLK-NIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERM 532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 786 LSQ---LEAERQALRRDLETLQLTHKQ--------LEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDD 854
Cdd:pfam05483 533 LKQienLEEKEMNLRDELESVREEFIQkgdevkckLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEE 612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 855 SAAKLSAAEKESRALDKELARCRDVGSKLK-ELEKDNRDLTKQVTMHTRTLTTLR---EDLVLEKLKSQQLSSELDKLSQ 930
Cdd:pfam05483 613 LHQENKALKKKGSAENKQLNAYEIKVNKLElELASAKQKFEEIIDNYQKEIEDKKiseEKLLEEVEKAKAIADEAVKLQK 692
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 931 ELEKV---GLSKDLLLQEDDGHGDGKGKTEsalkttlamKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQE 1007
Cdd:pfam05483 693 EIDKRcqhKIAEMVALMEKHKHQYDKIIEE---------RDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLE 763
|
730
....*....|....*...
gi 47059089 1008 GGDKAQNALKRPPGKVTS 1025
Cdd:pfam05483 764 IEKEEKEKLKMEAKENTA 781
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
597-1418 |
6.97e-17 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 87.33 E-value: 6.97e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 597 TEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAaTEKVEALEHQSQGLELENRSLR 676
Cdd:pfam02463 172 KEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLY-LDYLKLNEERIDLLQELLRDEQ 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 677 KSLDTLQNVSVQ-LEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKtlsKKSERLE 755
Cdd:pfam02463 251 EEIESSKQEIEKeEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESE---KEKKKAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 756 LSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQL-EGAEEDRKALEQEVAQLEKDKKLL 834
Cdd:pfam02463 328 KELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLEsERLSSAAKLKEEELELKSEEEKEA 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 835 EKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNRD---------LTKQVTMHTRTLT 905
Cdd:pfam02463 408 QLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELelkksedllKETQLVKLQEQLE 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 906 TLREDLVLEKLKSQQLSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLS 985
Cdd:pfam02463 488 LLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLV 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 986 RQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLRVKDRAIELERSNAALQAERQ 1065
Cdd:pfam02463 568 RALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESG 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1066 LLK-EQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAKEAEHEGL 1144
Cdd:pfam02463 648 LRKgVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRV 727
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1145 QQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKAELEELEKVLSTE 1224
Cdd:pfam02463 728 QEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALE 807
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1225 REALEREQKTNAIATSENQRLRGELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSRWQVrfDELKEQHQSMDIS 1304
Cdd:pfam02463 808 EELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQEL--LLKEEELEEQKLK 885
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1305 LTKMDNHCELLSRLKGNLEEENH--HLLSQIQLLSQQNQMLLEQNMESKEQYHEEQKQYIDKLNALRRHKEKLEEKIMDQ 1382
Cdd:pfam02463 886 DELESKEEKEKEEKKELEEESQKlnLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRL 965
|
810 820 830
....*....|....*....|....*....|....*.
gi 47059089 1383 YKFYDPAPKKKNHWIGAKALVKLIKPKKEGSRERLK 1418
Cdd:pfam02463 966 LLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLE 1001
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
507-1243 |
9.63e-16 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 83.62 E-value: 9.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 507 SKKIEKLQTQLEREKQSNQDLETLSEELIREKE-QLQSGMEALKADRaRQIKDLEQEKGHLhqavwSLRERPQVNSTKDV 585
Cdd:pfam05483 73 SEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKEnKLQENRKIIEAQR-KAIQELQFENEKV-----SLKLEEEIQENKDL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 586 EKENRA-------LHQAVTEAGSKLSQLELEKQ---QLHRDLEEAKEKgeqaEALEKELHRLEKENEQLTKEVtSLKAAT 655
Cdd:pfam05483 147 IKENNAtrhlcnlLKETCARSAEKTKKYEYEREetrQVYMDLNNNIEK----MILAFEELRVQAENARLEMHF-KLKEDH 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 656 EKVEALEHQSQGlELENRSLRKSLDTLQnvSVQLEGLERDKQQLGQENLE-LRKMVEAMRFTSAKMAQIETENRQLEREK 734
Cdd:pfam05483 222 EKIQHLEEEYKK-EINDKEKQVSLLLIQ--ITEKENKMKDLTFLLEESRDkANQLEEKTKLQDENLKELIEKKDHLTKEL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 735 EELRrdVELLKTLSKKsERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQ-LEGA 813
Cdd:pfam05483 299 EDIK--MSLQRSMSTQ-KALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQrLEKN 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 814 EEDRKALEQEV----AQLEKDKKLLEKEARRLwqqVELKDAILDDSaaKLSAAEKESRALDKEL-ARCRDVGSKLKELEK 888
Cdd:pfam05483 376 EDQLKIITMELqkksSELEEMTKFKNNKEVEL---EELKKILAEDE--KLLDEKKQFEKIAEELkGKEQELIFLLQAREK 450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 889 DNRDLTKQVTM-------HTRTLTTLREDLVLEKLKSQQLSSELDKLSQElekvglSKDLLLQEDDGHGDGKGKTESALK 961
Cdd:pfam05483 451 EIHDLEIQLTAiktseehYLKEVEDLKTELEKEKLKNIELTAHCDKLLLE------NKELTQEASDMTLELKKHQEDIIN 524
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 962 TTlaMKEEKIVfleAQVEEKESLSRQLQIELQMIKKEHEQLR-QTQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHKEAT 1040
Cdd:pfam05483 525 CK--KQEERML---KQIENLEEKEMNLRDELESVREEFIQKGdEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNL 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1041 MELLRVKDRAIE-LERSNAALQAERQLLKEQLQHLEtqnVSFSSQILTLQKQSAFLQEHTTTLQTQT--AKLQVENSTLS 1117
Cdd:pfam05483 600 KKQIENKNKNIEeLHQENKALKKKGSAENKQLNAYE---IKVNKLELELASAKQKFEEIIDNYQKEIedKKISEEKLLEE 676
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1118 SQNAALSAQYTVLQSQQAAKEAEHEglqqqqeqlAAVYEALLQDHKHlgtlyecqssEYEALIRQHSCLKTLHRNLELEH 1197
Cdd:pfam05483 677 VEKAKAIADEAVKLQKEIDKRCQHK---------IAEMVALMEKHKH----------QYDKIIEERDSELGLYKNKEQEQ 737
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 47059089 1198 KEL-GERHGDLQQRKAELEELEKVLSTER---EALEREQKTNAIATSENQ 1243
Cdd:pfam05483 738 SSAkAALEIELSNIKAELLSLKKQLEIEKeekEKLKMEAKENTAILKDKK 787
|
|
| HkD_Hook1 |
cd22225 |
Hook domain found in protein Hook 1 (Hook1) and similar proteins; Hook1 is a ... |
17-162 |
2.80e-15 |
|
Hook domain found in protein Hook 1 (Hook1) and similar proteins; Hook1 is a microtubule-binding protein required for spermatid differentiation. It is a component of the FTS/Hook/FHIP complex (FHF complex), which may function to promote vesicle trafficking and/or fusion via the homotypic vesicular protein sorting (HOPS) complex.
Pssm-ID: 411796 Cd Length: 150 Bit Score: 74.89 E-value: 2.80e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 17 LVTWVKTFGSfGSGHQDnltlYMDLVDGIFLNQIMLQIDPRPSNQ----RINKHVNNDVNLRIQNLSILVRNIKTYYQEV 92
Cdd:cd22225 5 LIIWLQTFNT-AAPCQT----VQDLTSGVAMAQVLHQIDSSWFDEswlsRIKEDVGDNWRIKMSNLKKILQGIVDYYHEF 79
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 93 L-QQLIVMNLPNVLMIGK--DPLsgksmeEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEV 162
Cdd:cd22225 80 LdQQISEFLLPDLNRIAEhsDPV------ELGRLLQLILGCAVNCEKKQEHIQNIMTLEESVQHVVMTAIQEL 146
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
252-828 |
2.98e-15 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 82.01 E-value: 2.98e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 252 LAVE--LADTKARLRRVRQELEEKTEQ-----LADTRHEVDQLVLELQKAKQDNIQlaadarsARAYRDELDslrekanr 324
Cdd:PRK02224 176 LGVErvLSDQRGSLDQLKAQIEEKEEKdlherLNGLESELAELDEEIERYEEQREQ-------ARETRDEAD-------- 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 325 vERLEmdlvRCKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLtasRARSDKVHELEKENLQLkskLHDLELDrDAD 404
Cdd:PRK02224 241 -EVLE----EHEERREELETLEAEIEDLRETIAETEREREELAEEV---RDLRERLEELEEERDDL---LAEAGLD-DAD 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 405 KKQIEKLLEEYMVLEMAQKQSMKE-----SAHLGwELEQLSKNADLSDasrksfvfelnecasSRILKLEKENQSLQSTI 479
Cdd:PRK02224 309 AEAVEARREELEDRDEELRDRLEEcrvaaQAHNE-EAESLREDADDLE---------------ERAEELREEAAELESEL 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 480 QglrDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLErekqsnqDLETLSEELIREKEQLQSGMEALKADRARQIKDL 559
Cdd:PRK02224 373 E---EAREAVEDRREEIEELEEEIEELRERFGDAPVDLG-------NAEDFLEELREERDELREREAELEATLRTARERV 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 560 E-----QEKGHLHQAVWSLRERPQVNSTKDVEkenralhQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKEL 634
Cdd:PRK02224 443 EeaealLEAGKCPECGQPVEGSPHVETIEEDR-------ERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLE 515
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 635 HRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTL----QNVSVQLEGLERDKQQLGQENLELRKMV 710
Cdd:PRK02224 516 ERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAeeeaEEAREEVAELNSKLAELKERIESLERIR 595
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 711 EAMRFTSAKMAQIETENRQLER--EKEELRRDvellkTLSKKSER---LELSYQSVSAENLQLQHS-----LESSTHKSQ 780
Cdd:PRK02224 596 TLLAAIADAEDEIERLREKREAlaELNDERRE-----RLAEKRERkreLEAEFDEARIEEAREDKEraeeyLEQVEEKLD 670
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 47059089 781 ALQRELSQLEAERQALRRD---LETLQLTHKQLEGAEEDRKALEQEVAQLE 828
Cdd:PRK02224 671 ELREERDDLQAEIGAVENEleeLEELRERREALENRVEALEALYDEAEELE 721
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
247-737 |
3.17e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.91 E-value: 3.17e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAYRDELDS-----LREK 321
Cdd:COG1196 302 QDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAelaeaEEEL 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 322 ANRVERLEMDLVRCKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLTASRARSDKVHELEKENLQLKSKLHDLELDR 401
Cdd:COG1196 382 EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 402 DADKKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSfvfelnecassriLKLEKENQSLQSTIQG 481
Cdd:COG1196 462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA-------------ALLLAGLRGLAGAVAV 528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 482 LRDTSLALEESSLKYgELEKENQQLSKKIEKLQTQLEREKQSNQDLET-LSEELIREKEQLQSGMEALKADRARQIKDLE 560
Cdd:COG1196 529 LIGVEAAYEAALEAA-LAAALQNIVVEDDEVAAAAIEYLKAAKAGRATfLPLDKIRARAALAAALARGAIGAAVDLVASD 607
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 561 QEkghLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKE 640
Cdd:COG1196 608 LR---EADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEEL 684
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 641 NEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQlgQENLELRKMVEAMRFTSAKM 720
Cdd:COG1196 685 AERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELL--EEEELLEEEALEELPEPPDL 762
|
490
....*....|....*..
gi 47059089 721 AQIETENRQLEREKEEL 737
Cdd:COG1196 763 EELERELERLEREIEAL 779
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
265-1138 |
3.21e-15 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 82.15 E-value: 3.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 265 RVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARsarAYRDELDSLREKANRVERLEMDLVRCKEKLHDV-D 343
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKN---ALQEQLQAETELCAEAEEMRARLAARKQELEEIlH 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 344 FYKARMEELREDNIIL-IETKAM------LEEQLTASRARSDKVHeLEKENLQLKSKLHD---LELDRDADKKQIEKLLE 413
Cdd:pfam01576 79 ELESRLEEEEERSQQLqNEKKKMqqhiqdLEEQLDEEEAARQKLQ-LEKVTTEAKIKKLEediLLLEDQNSKLSKERKLL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 414 EYMVLEMaqkqsmkeSAHLGWElEQLSKNADLSDASRKSFVFELNEcassRILKLEKENQSLQSTIQGLRDTSLALEESS 493
Cdd:pfam01576 158 EERISEF--------TSNLAEE-EEKAKSLSKLKNKHEAMISDLEE----RLKKEEKGRQELEKAKRKLEGESTDLQEQI 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 494 LKY-GELEKENQQLSKKIEKLQTQLER-EKQSNQDLETLSEelIREKE----QLQSGMEALKADRAR---QIKDLEQE-- 562
Cdd:pfam01576 225 AELqAQIAELRAQLAKKEEELQAALARlEEETAQKNNALKK--IRELEaqisELQEDLESERAARNKaekQRRDLGEEle 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 563 --KGHL---------HQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLelekqqlhrdLEEAKEKGEQAE--- 628
Cdd:pfam01576 303 alKTELedtldttaaQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQA----------LEELTEQLEQAKrnk 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 629 -ALEKELHRLEKENEQLTKEVTSLKAATEKVEaleHQSQGLELEnrslrksldtLQNVSVQLEGLERDKQQLGQENLELR 707
Cdd:pfam01576 373 aNLEKAKQALESENAELQAELRTLQQAKQDSE---HKRKKLEGQ----------LQELQARLSESERQRAELAEKLSKLQ 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 708 KMVEAMrftSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQS----VSAENLQLQHSLESSTHKSQALQ 783
Cdd:pfam01576 440 SELESV---SSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTrlrqLEDERNSLQEQLEEEEEAKRNVE 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 784 RELSQLEAERQALRRDLETLQLThkqLEGAEEDRKALEQEVAQL-------EKDKKLLEKEARRLWQQVELKDAILDDSA 856
Cdd:pfam01576 517 RQLSTLQAQLSDMKKKLEEDAGT---LEALEEGKKRLQRELEALtqqleekAAAYDKLEKTKNRLQQELDDLLVDLDHQR 593
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 857 AKLSAAEKESRALDKELARCRDVGSKLKE---------LEKDNRDLT------------KQVTMHTRTLTTLREDLVLEK 915
Cdd:pfam01576 594 QLVSNLEKKQKKFDQMLAEEKAISARYAEerdraeaeaREKETRALSlaraleealeakEELERTNKQLRAEMEDLVSSK 673
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 916 LKSQQLSSELDK----LSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESL----SRQ 987
Cdd:pfam01576 674 DDVGKNVHELERskraLEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQlvkqVRE 753
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 988 LQIELQMIKKE------------------HEQLRQTQEGGDKAQNALKRPPGKVTSHQEK-------------EAWEPSH 1036
Cdd:pfam01576 754 LEAELEDERKQraqavaakkkleldlkelEAQIDAANKGREEAVKQLKKLQAQMKDLQREleearasrdeilaQSKESEK 833
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1037 KEATME--LLRVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENS 1114
Cdd:pfam01576 834 KLKNLEaeLLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLR 913
|
970 980
....*....|....*....|....*...
gi 47059089 1115 TLSSQ----NAALSAQYTVLQSQQAAKE 1138
Cdd:pfam01576 914 KSTLQveqlTTELAAERSTSQKSESARQ 941
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
253-1004 |
5.32e-15 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 81.73 E-value: 5.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 253 AVELADTKARLRRVRQELEEKTEQlADTRHEVDQLVLELQKAkqDNIQLAADARSAR-AYRDELDSLREKANRVE--RLE 329
Cdd:PTZ00121 1096 AFGKAEEAKKTETGKAEEARKAEE-AKKKAEDARKAEEARKA--EDARKAEEARKAEdAKRVEIARKAEDARKAEeaRKA 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 330 MDLVRCKEKLHDVDFYKArmEELRE-DNIILIETKAMLEEQLTASRAR----SDKVHELEKENLQLKSKLHDLELDRDAD 404
Cdd:PTZ00121 1173 EDAKKAEAARKAEEVRKA--EELRKaEDARKAEAARKAEEERKAEEARkaedAKKAEAVKKAEEAKKDAEEAKKAEEERN 1250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 405 KKQIEKLLEEYMVLEMAQKQSMK-ESAHLGWEL---EQLSKNADLSDASRKSFVFELNECA--SSRILKLEKENQSLQST 478
Cdd:PTZ00121 1251 NEEIRKFEEARMAHFARRQAAIKaEEARKADELkkaEEKKKADEAKKAEEKKKADEAKKKAeeAKKADEAKKKAEEAKKK 1330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 479 IQGLRDTSlalEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKA-----DRA 553
Cdd:PTZ00121 1331 ADAAKKKA---EEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKaeedkKKA 1407
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 554 RQIKDLEQEKGHLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQ-QLHRDLEEAKEKGEQAEALEK 632
Cdd:PTZ00121 1408 DELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKaEEAKKADEAKKKAEEAKKADE 1487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 633 elhrLEKENEQLTKEVTSLKAATEKVEALEhqsqglELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEA 712
Cdd:PTZ00121 1488 ----AKKKAEEAKKKADEAKKAAEAKKKAD------EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEEL 1557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 713 MRFTSAKmaQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRE------- 785
Cdd:PTZ00121 1558 KKAEEKK--KAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAeeekkkv 1635
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 786 --LSQLEAER----QALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKL 859
Cdd:PTZ00121 1636 eqLKKKEAEEkkkaEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEK 1715
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 860 SAAEKESRALDKELARCRDVGSKLKELEKDNRDLTKQVTmhtrtlttlredlvlEKLKSQQLSSELDKLSQEL--EKVGL 937
Cdd:PTZ00121 1716 KKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEE---------------EKKKIAHLKKEEEKKAEEIrkEKEAV 1780
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47059089 938 SKDLLLQEDDGHGDGKGKTESALKTTLAM----KEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQ 1004
Cdd:PTZ00121 1781 IEEELDEEDEKRRMEVDKKIKDIFDNFANiiegGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEK 1851
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
497-1075 |
9.53e-15 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 80.49 E-value: 9.53e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 497 GELEK--ENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEAlKADRARQIKDLEQEKGHLHQAVWSLR 574
Cdd:PRK03918 135 GEIDAilESDESREKVVRQILGLDDYENAYKNLGEVIKEIKRRIERLEKFIKR-TENIEELIKEKEKELEEVLREINEIS 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 575 -ERPQVNSTKD-VEKENRALHqavtEAGSKLSQLELEKQQLHRDLEeakekgeqaeALEKELHRLEKENEQLTKEVTSLK 652
Cdd:PRK03918 214 sELPELREELEkLEKEVKELE----ELKEEIEELEKELESLEGSKR----------KLEEKIRELEERIEELKKEIEELE 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 653 AATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEamrftsaKMAQIETENRQLER 732
Cdd:PRK03918 280 EKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEE-------RLEELKKKLKELEK 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 733 EKEELRRDVELLKTLSKKSERLELSYQSVSAENLQ-LQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLE 811
Cdd:PRK03918 353 RLEELEERHELYEEAKAKKEELERLKKRLTGLTPEkLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELK 432
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 812 GA------------EEDRKAL----EQEVAQLEKDKKLLEKEARRLWQQ-VELKDAILDDSA-AKLSAAEKESRALDKEL 873
Cdd:PRK03918 433 KAkgkcpvcgreltEEHRKELleeyTAELKRIEKELKEIEEKERKLRKElRELEKVLKKESElIKLKELAEQLKELEEKL 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 874 ArcrdvGSKLKELEKDNRDLTKqvtmhtrtlttLREDLVleKLKSQQ--LSSELDKLsQELEKvglSKDLLLQEDDGHGD 951
Cdd:PRK03918 513 K-----KYNLEELEKKAEEYEK-----------LKEKLI--KLKGEIksLKKELEKL-EELKK---KLAELEKKLDELEE 570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 952 GKGKTESALK----TTLAMKEEKIVFLEAQVEEKESLS---RQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRPPGKVT 1024
Cdd:PRK03918 571 ELAELLKELEelgfESVEELEERLKELEPFYNEYLELKdaeKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELE 650
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 47059089 1025 ------SHQEKEAWEPSHKEATMELLRVKDRAIELERSNAALQAERQLLKEQLQHLE 1075
Cdd:PRK03918 651 elekkySEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE 707
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
343-1142 |
1.23e-14 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 80.02 E-value: 1.23e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 343 DFYKARMEELRE-----DNIILIETKAMLEEqltASRARSDKVHELEKENLQLKSKLHDLELDRDAD------KKQIEKL 411
Cdd:pfam02463 166 RLKRKKKEALKKlieetENLAELIIDLEELK---LQELKLKEQAKKALEYYQLKEKLELEEEYLLYLdylklnEERIDLL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 412 LEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSFVFELNECASsrilKLEKENQSLQSTIQGLRDTSLALEE 491
Cdd:pfam02463 243 QELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAK----EEEELKSELLKLERRKVDDEEKLKE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 492 SSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGhLHQAVW 571
Cdd:pfam02463 319 SEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAK-LKEEEL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 572 SLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSL 651
Cdd:pfam02463 398 ELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKET 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 652 KAATEKVEALEHQSQGLELENRSL----RKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETEN 727
Cdd:pfam02463 478 QLVKLQEQLELLLSRQKLEERSQKeskaRSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATA 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 728 RQLEREKEELRRDVELLKTLSKKSERLEL------------------------------------SYQSVSAENLQLQHS 771
Cdd:pfam02463 558 DEVEERQKLVRALTELPLGARKLRLLIPKlklplksiavleidpilnlaqldkatleadeddkraKVVEGILKDTELTKL 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 772 LESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKA--LEQEVAQLEKDKKLLEKEARRLWQQVELKD 849
Cdd:pfam02463 638 KESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAesELAKEEILRRQLEIKKKEQREKEELKKLKL 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 850 AILDDSAAKLSAAEKESRALDKELARCRDVGSKlKELEKDNRDLTKQVTMHTRTL--TTLREDLVLEKLKSQQLSSELDK 927
Cdd:pfam02463 718 EAEELLADRVQEAQDKINEELKLLKQKIDEEEE-EEEKSRLKKEEKEEEKSELSLkeKELAEEREKTEKLKVEEEKEEKL 796
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 928 LSQELEKVGLSKDLLLQEDDGHGDGKGKTESalkttLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQE 1007
Cdd:pfam02463 797 KAQEEELRALEEELKEEAELLEEEQLLIEQE-----EKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQE 871
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1008 GGDKAQNALKRPPGKVTSHQEKEAwepshKEATMELLRVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQILT 1087
Cdd:pfam02463 872 LLLKEEELEEQKLKDELESKEEKE-----KEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEAD 946
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 47059089 1088 LQKqsaFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAKEAEHE 1142
Cdd:pfam02463 947 EKE---KEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKE 998
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
470-910 |
1.58e-14 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 79.57 E-value: 1.58e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 470 KENQSLQSTIQGLRDTsLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSG-MEAL 548
Cdd:COG4913 265 AAARERLAELEYLRAA-LRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDrLEQL 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 549 KADRAR---QIKDLEQEKGHLHQAVWSLRErPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEkge 625
Cdd:COG4913 344 EREIERlerELEERERRRARLEALLAALGL-PLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRR--- 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 626 QAEALEKELHRLEKENEQLTKEVTSLKAA--------------------------------------------------- 654
Cdd:COG4913 420 ELRELEAEIASLERRKSNIPARLLALRDAlaealgldeaelpfvgelievrpeeerwrgaiervlggfaltllvppehya 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 655 ----------------TEKVEALEHQSQGLELENRSL-RK--------------------------SLDTLQNV--SVQL 689
Cdd:COG4913 500 aalrwvnrlhlrgrlvYERVRTGLPDPERPRLDPDSLaGKldfkphpfrawleaelgrrfdyvcvdSPEELRRHprAITR 579
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 690 EGLERDKQQLGQENLelRKMVEAMRF----TSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAEN 765
Cdd:COG4913 580 AGQVKGNGTRHEKDD--RRRIRSRYVlgfdNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYS 657
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 766 LQLQhslessthKSQALQRELSQLEAERQALRR---DLETLQlthKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLW 842
Cdd:COG4913 658 WDEI--------DVASAEREIAELEAELERLDAssdDLAALE---EQLEELEAELEELEEELDELKGEIGRLEKELEQAE 726
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 843 QQVELKDAILDDsAAKLSAAEKESRALDK--ELARCRDVGSKLKELEKDNRDLTKQVTMHTRTLTTLRED 910
Cdd:COG4913 727 EELDELQDRLEA-AEDLARLELRALLEERfaAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
262-1002 |
2.27e-14 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 79.32 E-value: 2.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 262 RLRRVRQELEEKTEQladtrHEVDQLVLELQKAKQDNI---------QLAADARSARAYRDELDSLREKANRVERLEMDL 332
Cdd:TIGR00606 190 TLRQVRQTQGQKVQE-----HQMELKYLKQYKEKACEIrdqitskeaQLESSREIVKSYENELDPLKNRLKEIEHNLSKI 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 333 VRCKEKLHDVDFYKARMEELRED-NIILIETKAMLEEQLTA-SRARSDKVHELEKENLQLKSKLHDLELDRDADKKQIEK 410
Cdd:TIGR00606 265 MKLDNEIKALKSRKKQMEKDNSElELKMEKVFQGTDEQLNDlYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 411 LLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSFV-FELNECASSRILKLEKE----NQSLQSTIQGLRDT 485
Cdd:TIGR00606 345 LLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSeRQIKNFHTLVIERQEDEaktaAQLCADLQSKERLK 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 486 SLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEAL-KADRARQIKDLEQEKG 564
Cdd:TIGR00606 425 QEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELsKAEKNSLTETLKKEVK 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 565 HLHQA----VWSLRERPQVNSTKDVEKENRALHQAVT-EAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEK 639
Cdd:TIGR00606 505 SLQNEkadlDRKLRKLDQEMEQLNHHTTTRTQMEMLTkDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSK 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 640 ENEQLTKEVTSLKAATEKVEALEHQ--SQGLELENRSLRKSLDTLQNVSVQLE--GLERDKQQLGQENLELRKMVEAMRF 715
Cdd:TIGR00606 585 EINQTRDRLAKLNKELASLEQNKNHinNELESKEEQLSSYEDKLFDVCGSQDEesDLERLKEEIEKSSKQRAMLAGATAV 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 716 TSAKMAQIETENR----------QLEREKEELRRDVE-LLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQR 784
Cdd:TIGR00606 665 YSQFITQLTDENQsccpvcqrvfQTEAELQEFISDLQsKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEK 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 785 ELSQLEAERQALRRDLE----TLQLTHKQLE---GAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAIldDSAA 857
Cdd:TIGR00606 745 EIPELRNKLQKVNRDIQrlknDIEEQETLLGtimPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGS--DLDR 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 858 KLSAAEKESRALDKELARCRDVGSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEKvgl 937
Cdd:TIGR00606 823 TVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQS--- 899
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47059089 938 skdlLLQEDDGHGDGKGKTESALKTTLAMKEEKIvfleaqvEEKESLSRQLQIELQMIKKEHEQL 1002
Cdd:TIGR00606 900 ----LIREIKDAKEQDSPLETFLEKDQQEKEELI-------SSKETSNKKAQDKVNDIKEKVKNI 953
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
500-1134 |
3.14e-14 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 78.62 E-value: 3.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 500 EKENQQLSKKIEKLQTQLE--------------REKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQ---- 561
Cdd:pfam15921 102 EKQKFYLRQSVIDLQTKLQemqmerdamadirrRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKmmls 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 562 EKGHLHQAVWSLRERPQVNSTKDVEKEN------RALHQAVT----EAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALE 631
Cdd:pfam15921 182 HEGVLQEIRSILVDFEEASGKKIYEHDSmstmhfRSLGSAISkilrELDTEISYLKGRIFPVEDQLEALKSESQNKIELL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 632 KELH--RLEKENEQLTKEVTSL--KAATEKVEALEHQSQgLEL-------ENRSLRKSLDTLQNVSVQLEGLERDKQQLG 700
Cdd:pfam15921 262 LQQHqdRIEQLISEHEVEITGLteKASSARSQANSIQSQ-LEIiqeqarnQNSMYMRQLSDLESTVSQLRSELREAKRMY 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 701 QENLElrKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVE-LLKTLSKKSERLELSYQsvsaENLQLQHSLESSTHKS 779
Cdd:pfam15921 341 EDKIE--ELEKQLVLANSELTEARTERDQFSQESGNLDDQLQkLLADLHKREKELSLEKE----QNKRLWDRDTGNSITI 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 780 QALQRELSQLEAERQALRRDLETL------QLTHKQ--LEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQ---VELK 848
Cdd:pfam15921 415 DHLRRELDDRNMEVQRLEALLKAMksecqgQMERQMaaIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKkmtLESS 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 849 DAILDDSAAKLSAAEKESRALDKELARCRD-VGSKLKELE--KDNRDLTKQVTMHTRT--LTTLREDLVLEKLKSQqlss 923
Cdd:pfam15921 495 ERTVSDLTASLQEKERAIEATNAEITKLRSrVDLKLQELQhlKNEGDHLRNVQTECEAlkLQMAEKDKVIEILRQQ---- 570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 924 eLDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKivflEAQVEEKESLSRQLQIE-LQMIKKEHEQL 1002
Cdd:pfam15921 571 -IENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKK----DAKIRELEARVSDLELEkVKLVNAGSERL 645
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1003 RQT---QEGGDKAQNALKRPPGKVTS-HQEKEAWEPSHKEATMELLRVKDR-AIELERSNAALQAERQLLKEQ------- 1070
Cdd:pfam15921 646 RAVkdiKQERDQLLNEVKTSRNELNSlSEDYEVLKRNFRNKSEEMETTTNKlKMQLKSAQSELEQTRNTLKSMegsdgha 725
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47059089 1071 ---LQHLETQNVSFSSQILTLQKQSAFLQEHTTT-------LQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQ 1134
Cdd:pfam15921 726 mkvAMGMQKQITAKRGQIDALQSKIQFLEEAMTNankekhfLKEEKNKLSQELSTVATEKNKMAGELEVLRSQE 799
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
728-1379 |
4.98e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 78.05 E-value: 4.98e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 728 RQLEREKEELRRDVELL---KTLSKKSERLE-----LSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRD 799
Cdd:COG1196 196 GELERQLEPLERQAEKAeryRELKEELKELEaelllLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 800 LETLQLthkQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELArcrDV 879
Cdd:COG1196 276 LEELEL---ELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE---EA 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 880 GSKLKELEKDNRDLTKQVTMHTRTLTTLREDLvleklkSQQLSSELDKLSQELEKVGLSKDLLLQEDDghgdgkgktesa 959
Cdd:COG1196 350 EEELEEAEAELAEAEEALLEAEAELAEAEEEL------EELAEELLEALRAAAELAAQLEELEEAEEA------------ 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 960 lkttlamKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRPpgkvtsHQEKEAWEPSHKEA 1039
Cdd:COG1196 412 -------LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLEL------LAELLEEAALLEAA 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1040 TMELLRVKDRAIELERSNAALQAERQLLKEQLQHLEtQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQ 1119
Cdd:COG1196 479 LAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL-LLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDE 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1120 NAALSAQYtvLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLyecqsseyEALIRQHSCLKTLHRNLELEHKE 1199
Cdd:COG1196 558 VAAAAIEY--LKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLV--------ASDLREADARYYVLGDTLLGRTL 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1200 LGERHGDLQQRKAELEELEKVLSTEREALE-REQKTNAIATSENQRLRGELDRISFLHQQLKGEYEELHAHTKElktsln 1278
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLEGEGGSaGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA------ 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1279 nsQLELSRWQVRFDELKEQhqsmdisltkmdnhcellsrlkgnLEEENHHLLSQIQLLSQQNQMLLEQNMESKEQYHEEQ 1358
Cdd:COG1196 702 --EEEEERELAEAEEERLE------------------------EELEEEALEEQLEAEREELLEELLEEEELLEEEALEE 755
|
650 660
....*....|....*....|.
gi 47059089 1359 KQYIDKLNALRRHKEKLEEKI 1379
Cdd:COG1196 756 LPEPPDLEELERELERLEREI 776
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
548-1275 |
6.88e-14 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 77.70 E-value: 6.88e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 548 LKADRARQIKDLEQEKGHLHQAVWSLRERPQVnsTKDVEKENRALHQAVTEAGSKLSQLEL---EKQQLHRDLEEAKEKG 624
Cdd:TIGR00618 192 LHGKAELLTLRSQLLTLCTPCMPDTYHERKQV--LEKELKHLREALQQTQQSHAYLTQKREaqeEQLKKQQLLKQLRARI 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 625 EQAEALEKELHRLEKENEQLTKeVTSLKAATEKVEALEHQSQG----LELENRSLRKSLDTLQNVSVQ---LEGLERDKQ 697
Cdd:TIGR00618 270 EELRAQEAVLEETQERINRARK-AAPLAAHIKAVTQIEQQAQRihteLQSKMRSRAKLLMKRAAHVKQqssIEEQRRLLQ 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 698 QLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLElsyqsvsaenlQLQHSLESSTH 777
Cdd:TIGR00618 349 TLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQ-----------REQATIDTRTS 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 778 KSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAA 857
Cdd:TIGR00618 418 AFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 858 KLSAAEKESRALDKELARCRDVG-------SKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQ 930
Cdd:TIGR00618 498 ELQEEPCPLCGSCIHPNPARQDIdnpgpltRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQ 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 931 ELEKVGLSKDLLLQEddghgdgkgkTESALKTTLAMKEEKIVFLEAQVEEKESLsrQLQIELQMIKKEHEQLRQTQEggd 1010
Cdd:TIGR00618 578 CDNRSKEDIPNLQNI----------TVRLQDLTEKLSEAEDMLACEQHALLRKL--QPEQDLQDVRLHLQQCSQELA--- 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1011 KAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLRVkdraielERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQK 1090
Cdd:TIGR00618 643 LKLTALHALQLTLTQERVREHALSIRVLPKELLASR-------QLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEE 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1091 QSAFLQEHTTTLQTQTAKLQVENSTLSsqnaalsaqytvlQSQQAAKEAEHEGLqqqqeqlaavyeallqdhKHLGTLYE 1170
Cdd:TIGR00618 716 YDREFNEIENASSSLGSDLAAREDALN-------------QSLKELMHQARTVL------------------KARTEAHF 764
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1171 CQSSEYEALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKAELE------ELEKVLSTEREALEREQKTNAIAtsENQR 1244
Cdd:TIGR00618 765 NNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGqeipsdEDILNLQCETLVQEEEQFLSRLE--EKSA 842
|
730 740 750
....*....|....*....|....*....|.
gi 47059089 1245 LRGELDRISFLHQQLKGEYEELHAHTKELKT 1275
Cdd:TIGR00618 843 TLGEITHQLLKYEECSKQLAQLTQEQAKIIQ 873
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
329-1384 |
9.79e-14 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 77.14 E-value: 9.79e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 329 EMDLVRCKEKLHDVDfykARMEELREDNIILIETKAMLEEQLTASRARSDKVHE----LEKENLQLKSKLHDLE--LDRD 402
Cdd:pfam01576 11 EEELQKVKERQQKAE---SELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEmrarLAARKQELEEILHELEsrLEEE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 403 ADKK---QIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSknadlSDASRKSFVFELNECASSRIlKLEKENQSLQSTI 479
Cdd:pfam01576 88 EERSqqlQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVT-----TEAKIKKLEEDILLLEDQNS-KLSKERKLLEERI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 480 QGLRDTSLALEESSLKYGELEKENQQLskkIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDL 559
Cdd:pfam01576 162 SEFTSNLAEEEEKAKSLSKLKNKHEAM---ISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 560 EQEKGHLHQAVWSLRERPQVNSTkdVEKENRALHQAVTEAgskLSQLELEKQQLHRDLEEAKEKGEQAEALEKEL----- 634
Cdd:pfam01576 239 AKKEEELQAALARLEEETAQKNN--ALKKIRELEAQISEL---QEDLESERAARNKAEKQRRDLGEELEALKTELedtld 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 635 -----HRLEKENEQltkEVTSLKAATEKvEALEHQSQGLELEnrslRKSLDTLQNVSVQLE-------GLERDKQQLGQE 702
Cdd:pfam01576 314 ttaaqQELRSKREQ---EVTELKKALEE-ETRSHEAQLQEMR----QKHTQALEELTEQLEqakrnkaNLEKAKQALESE 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 703 NLELrkmVEAMRFTSAKMAQIETENRQLEREKEELR---RDVELLKT-LSKKSERLELSYQSVSaenlqlqHSLESSTHK 778
Cdd:pfam01576 386 NAEL---QAELRTLQQAKQDSEHKRKKLEGQLQELQarlSESERQRAeLAEKLSKLQSELESVS-------SLLNEAEGK 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 779 SQALQRELSQLEAERQALRRDL--ET---LQLTHKqLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILD 853
Cdd:pfam01576 456 NIKLSKDVSSLESQLQDTQELLqeETrqkLNLSTR-LRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLE 534
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 854 DSAAKLSAAEKESRALDKELarcRDVGSKLKELEKDNRDLTKQVTMHTRTLttlrEDLVLEKLKSQQLSSELDKLSQELe 933
Cdd:pfam01576 535 EDAGTLEALEEGKKRLQREL---EALTQQLEEKAAAYDKLEKTKNRLQQEL----DDLLVDLDHQRQLVSNLEKKQKKF- 606
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 934 kvglskDLLLQEddghgdgkgktESALKTTLAMKEEKIvflEAQVEEKE----SLSRQLQiELQMIKKEHEQLRQTQEgg 1009
Cdd:pfam01576 607 ------DQMLAE-----------EKAISARYAEERDRA---EAEAREKEtralSLARALE-EALEAKEELERTNKQLR-- 663
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1010 dkaqnalkrppgkvtshqekeawepshkeATME-LLRVKD----RAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQ 1084
Cdd:pfam01576 664 -----------------------------AEMEdLVSSKDdvgkNVHELERSKRALEQQVEEMKTQLEELEDELQATEDA 714
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1085 ILTLQ-KQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVY-------- 1155
Cdd:pfam01576 715 KLRLEvNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIdaankgre 794
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1156 EALLQDHKHLGTLYECQSSEYEALIRQHSCLkTLHRNLELEHKELGERHGDLQQRKAELEELEKVLSTEREALEREQKTN 1235
Cdd:pfam01576 795 EAVKQLKKLQAQMKDLQRELEEARASRDEIL-AQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASG 873
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1236 AiatSENQRLRGELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLelsrwqvrfdelkeQHQSMDISLTKMDNHCELL 1315
Cdd:pfam01576 874 A---SGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTL--------------QVEQLTTELAAERSTSQKS 936
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1316 SRLKGNLEEENHHLLSQIQLLSQQ---NQMLLEQNMESK-----EQYHEEQKQYIDKLNALRRHKEKLEEKIM------- 1380
Cdd:pfam01576 937 ESARQQLERQNKELKAKLQEMEGTvksKFKSSIAALEAKiaqleEQLEQESRERQAANKLVRRTEKKLKEVLLqvederr 1016
|
....*.
gi 47059089 1381 --DQYK 1384
Cdd:pfam01576 1017 haDQYK 1022
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
248-828 |
1.40e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 76.62 E-value: 1.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 248 DKQHLAVELADTKARLRRVRQELEEKTEQLADtrhevdqlvLELQKAKqdniqlaadarsARAYRDELDslrekanrvER 327
Cdd:PRK02224 193 KAQIEEKEEKDLHERLNGLESELAELDEEIER---------YEEQREQ------------ARETRDEAD---------EV 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 328 LEmdlvRCKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLtasRARSDKVHELEKENLQLkskLHDLELDrDADKKQ 407
Cdd:PRK02224 243 LE----EHEERREELETLEAEIEDLRETIAETEREREELAEEV---RDLRERLEELEEERDDL---LAEAGLD-DADAEA 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 408 IEKLLEEYMVLEMAQKQSMKE-----SAHLGwELEQLSKNADLSDasrksfvfelnecasSRILKLEKENQSLQSTIQgl 482
Cdd:PRK02224 312 VEARREELEDRDEELRDRLEEcrvaaQAHNE-EAESLREDADDLE---------------ERAEELREEAAELESELE-- 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 483 rDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLErekqsnqDLETLSEELIREKEQLQSGMEALKADRARQIKDLE-- 560
Cdd:PRK02224 374 -EAREAVEDRREEIEELEEEIEELRERFGDAPVDLG-------NAEDFLEELREERDELREREAELEATLRTARERVEea 445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 561 ---QEKGHLHQAVWSLRERPQVNSTKDVEkenralhQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRL 637
Cdd:PRK02224 446 ealLEAGKCPECGQPVEGSPHVETIEEDR-------ERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERR 518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 638 EKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTL----QNVSVQLEGLERDKQQLGQENLELRKMVEAM 713
Cdd:PRK02224 519 EDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAeeeaEEAREEVAELNSKLAELKERIESLERIRTLL 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 714 RFTSAKMAQIETENRQLER--EKEELRRDvellkTLSKKSERLELSYQSVSAENLQ-LQHSLESSTHKSQALQRELSQLE 790
Cdd:PRK02224 599 AAIADAEDEIERLREKREAlaELNDERRE-----RLAEKRERKRELEAEFDEARIEeAREDKERAEEYLEQVEEKLDELR 673
|
570 580 590
....*....|....*....|....*....|....*...
gi 47059089 791 AERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLE 828
Cdd:PRK02224 674 EERDDLQAEIGAVENELEELEELRERREALENRVEALE 711
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
247-840 |
2.53e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 75.95 E-value: 2.53e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQlVLELQKAkqDNIQLAADARSARAYRDELDSLR-EKANRV 325
Cdd:PTZ00121 1150 DAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRK-AEELRKA--EDARKAEAARKAEEERKAEEARKaEDAKKA 1226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 326 ERLEmdlvRCKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLTASRARSD---KVHELEKENLQLKSKlhdlELDRD 402
Cdd:PTZ00121 1227 EAVK----KAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEearKADELKKAEEKKKAD----EAKKA 1298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 403 ADKKQIEKL---LEEYMVLEMAQK---QSMKESAHLGWELEQLSKNADLSDASRKSFVFELnECASSRILKLEKENQSLQ 476
Cdd:PTZ00121 1299 EEKKKADEAkkkAEEAKKADEAKKkaeEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEA-EAAEEKAEAAEKKKEEAK 1377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 477 STIQGLRDTSlaleESSLKYGELEKENQQLSKKIEKLQTQlEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQI 556
Cdd:PTZ00121 1378 KKADAAKKKA----EEKKKADEAKKKAEEDKKKADELKKA-AAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKK 1452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 557 KDLEQEKGHLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQL-----------ELEKQQLHRDLEEAKeKGE 625
Cdd:PTZ00121 1453 AEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAkkaaeakkkadEAKKAEEAKKADEAK-KAE 1531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 626 QAEALEKELHRLEKENEQLTKEVTSLKAATEKVEAlEHQSQGLELENRSLRKSldtlqnvsvqlEGLERDKQQLGQENLE 705
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELKKAEELKKAEEKKKA-EEAKKAEEDKNMALRKA-----------EEAKKAEEARIEEVMK 1599
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 706 LRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLS----KKSERLELSYQSVSAENLQLQHSLESSTHKSQA 781
Cdd:PTZ00121 1600 LYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEaeekKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEE 1679
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47059089 782 LQRELSQLEAERQALRRDLETL----QLTHKQLE---GAEEDRKALEQEVAQLEKDKKLLEKEARR 840
Cdd:PTZ00121 1680 AKKAEEDEKKAAEALKKEAEEAkkaeELKKKEAEekkKAEELKKAEEENKIKAEEAKKEAEEDKKK 1745
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
346-1066 |
3.26e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 75.56 E-value: 3.26e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 346 KARMEELREDNIILIETKAMLEEqltaSRARSDKVHELEK-ENLQLKSKLHDLELDRDADKKQIEKLLEEYMVLEMAQKQ 424
Cdd:PTZ00121 1097 FGKAEEAKKTETGKAEEARKAEE----AKKKAEDARKAEEaRKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKA 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 425 SMKESAHLGWELEQLSKNADLSDASRKSFVFELNECASSRILKLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQ 504
Cdd:PTZ00121 1173 EDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNE 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 505 QLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEkghlhqavwSLRERPQVNSTKD 584
Cdd:PTZ00121 1253 EIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKK---------AEEAKKADEAKKK 1323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 585 VEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATE-KVEALEH 663
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEaKKKAEED 1403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 664 QSQGLELENRSL-RKSLDTLQNVSVQLEGLE---------RDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLERE 733
Cdd:PTZ00121 1404 KKKADELKKAAAaKKKADEAKKKAEEKKKADeakkkaeeaKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAK 1483
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 734 K-EELRRDVELLKT----LSKKSERLELSYQSVSAENLQLQHSLESSTHKSQAlqRELSQLEAERQA--LRRDLETLQLT 806
Cdd:PTZ00121 1484 KaDEAKKKAEEAKKkadeAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA--DEAKKAEEKKKAdeLKKAEELKKAE 1561
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 807 HKQleGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEkESRALDKELARCRDVGSKLKEL 886
Cdd:PTZ00121 1562 EKK--KAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAE-EAKIKAEELKKAEEEKKKVEQL 1638
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 887 EKDNRDLTKQvtmhTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEKvglskdlllQEDDghgdgKGKTESALKTTlAM 966
Cdd:PTZ00121 1639 KKKEAEEKKK----AEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKK---------AEED-----EKKAAEALKKE-AE 1699
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 967 KEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQL-RQTQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLR 1045
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAkKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEA 1779
|
730 740
....*....|....*....|.
gi 47059089 1046 VKDRAIELERSNAALQAERQL 1066
Cdd:PTZ00121 1780 VIEEELDEEDEKRRMEVDKKI 1800
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
269-755 |
4.19e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 74.67 E-value: 4.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 269 ELEEKTEQLADTRHEVDQL---VLELQKAKQDNIQLAADARSARAYRDEL-DSLREKANRVERLEMDLVRCKEKLHDVdf 344
Cdd:TIGR04523 181 EKLNIQKNIDKIKNKLLKLellLSNLKKKIQKNKSLESQISELKKQNNQLkDNIEKKQQEINEKTTEISNTQTQLNQL-- 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 345 ykarMEELREDNIILIETKAMLEEQltasrarSDKVHELEKENLQLKSKLHDLELDRDAD-----KKQIEKLLEEYMVLE 419
Cdd:TIGR04523 259 ----KDEQNKIKKQLSEKQKELEQN-------NKKIKELEKQLNQLKSEISDLNNQKEQDwnkelKSELKNQEKKLEEIQ 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 420 MAQKQSMKESAHLGWELEQLSKNADLSDASRKSFVFELNEcASSRILKLEKENQSLQstiqglrdtslaleesslkygel 499
Cdd:TIGR04523 328 NQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEE-KQNEIEKLKKENQSYK----------------------- 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 500 eKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQ---IKDLEQEKGHLHQAVWSLrer 576
Cdd:TIGR04523 384 -QEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNnseIKDLTNQDSVKELIIKNL--- 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 577 pqvNSTKDVEKEnralhqavteagsKLSQLELEKQQLHRDLE----EAKEKGEQAEALEKELHRLEKENEQLTKEVTSLK 652
Cdd:TIGR04523 460 ---DNTRESLET-------------QLKVLSRSINKIKQNLEqkqkELKSKEKELKKLNEEKKELEEKVKDLTKKISSLK 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 653 AATEKVEALEHQ-------------SQGLELENRSLRKSLDTLQNVSVQL-----------EGLERDKQQLGQENLELRK 708
Cdd:TIGR04523 524 EKIEKLESEKKEkeskisdledelnKDDFELKKENLEKEIDEKNKEIEELkqtqkslkkkqEEKQELIDQKEKEKKDLIK 603
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 47059089 709 MVEamrftsAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLE 755
Cdd:TIGR04523 604 EIE------EKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLK 644
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
253-809 |
5.34e-13 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 74.57 E-value: 5.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 253 AVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAYRDELDSlrekaNRVERLEMDL 332
Cdd:COG4913 273 ELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGG-----DRLEQLEREI 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 333 VRCKEKLHDV----DFYKARMEELREDniiLIETKAMLEEQLTASRARSDKVHELEKEnlqLKSKLHDLELDRDADKKQI 408
Cdd:COG4913 348 ERLERELEERerrrARLEALLAALGLP---LPASAEEFAALRAEAAALLEALEEELEA---LEEALAEAEAALRDLRREL 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 409 EKLLEEYMVLEMAQKQSMKESAHLgweLEQLSKNADLsDASRKSFVFELnecassriLKLEKENQSLQSTIQG-LRDTSL 487
Cdd:COG4913 422 RELEAEIASLERRKSNIPARLLAL---RDALAEALGL-DEAELPFVGEL--------IEVRPEEERWRGAIERvLGGFAL 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 488 AL------EESSLKYgeLEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEEL-IRE-------KEQLQSGMEALKADRA 553
Cdd:COG4913 490 TLlvppehYAAALRW--VNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAGKLdFKPhpfrawlEAELGRRFDYVCVDSP 567
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 554 RQIKDLEQ---EKGHLHQAvWSLRErpqvnstKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKekgEQAEAL 630
Cdd:COG4913 568 EELRRHPRaitRAGQVKGN-GTRHE-------KDDRRRIRSRYVLGFDNRAKLAALEAELAELEEELAEAE---ERLEAL 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 631 EKELHRLEKENEQLTKeVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKmv 710
Cdd:COG4913 637 EAELDALQERREALQR-LAEYSWDEIDVASAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKG-- 713
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 711 eamrftsaKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLELsyqsvsAENLQLQHSLESSTHKSQALQRELSQLE 790
Cdd:COG4913 714 --------EIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALL------EERFAAALGDAVERELRENLEERIDALR 779
|
570
....*....|....*....
gi 47059089 791 AERQALRRDLETLQLTHKQ 809
Cdd:COG4913 780 ARLNRAEEELERAMRAFNR 798
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
461-930 |
1.00e-12 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 73.26 E-value: 1.00e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 461 ASSRILKLEKENQSLQSTIQGLRDtSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQ 540
Cdd:COG4717 100 LEEELEELEAELEELREELEKLEK-LLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEE 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 541 LQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERpqvnsTKDVEKENRALHQAVTEAGSKLSQLELEkQQLHRDLEEA 620
Cdd:COG4717 179 LEELLEQLSLATEEELQDLAEELEELQQRLAELEEE-----LEEAQEELEELEEELEQLENELEAAALE-ERLKEARLLL 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 621 KEKGEQAEALEKELHRLEKENE-----------------QLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQ 683
Cdd:COG4717 253 LIAAALLALLGLGGSLLSLILTiagvlflvlgllallflLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPP 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 684 NVSV-QLEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVS 762
Cdd:COG4717 333 DLSPeELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLE 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 763 AENLQLQHSLEssTHKSQALQRELSQLEAERQALRRDLETLQlthkqlegaeEDRKALEQEVAQLEKDKKLLEKEARRLW 842
Cdd:COG4717 413 ELLGELEELLE--ALDEEELEEELEELEEELEELEEELEELR----------EELAELEAELEQLEEDGELAELLQELEE 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 843 QQVELKDAILDDSAAKLSAAekesrALDKELARCRDvgSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLS 922
Cdd:COG4717 481 LKAELRELAEEWAALKLALE-----LLEEAREEYRE--ERLPPVLERASEYFSRLTDGRYRLIRIDEDLSLKVDTEDGRT 553
|
....*...
gi 47059089 923 SELDKLSQ 930
Cdd:COG4717 554 RPVEELSR 561
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
587-1381 |
2.43e-12 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 72.77 E-value: 2.43e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 587 KENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEalEHQSQ 666
Cdd:TIGR00606 186 KALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIE--HNLSK 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 667 GLELENrslrksldtlqnvsvQLEGLERDKQQLGQENLEL-RKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVEllK 745
Cdd:TIGR00606 264 IMKLDN---------------EIKALKSRKKQMEKDNSELeLKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQ--R 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 746 TLSK-KSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQL--------EGAEED 816
Cdd:TIGR00606 327 ELEKlNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIknfhtlviERQEDE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 817 RKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKEL----ARCRDVGSKLKELEKDNRD 892
Cdd:TIGR00606 407 AKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELqqleGSSDRILELDQELRKAERE 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 893 LTKqVTMHTRTLTTLREDLVLEKLKSqQLSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIV 972
Cdd:TIGR00606 487 LSK-AEKNSLTETLKKEVKSLQNEKA-DLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTS 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 973 FL-----EAQVEEK-ESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLRV 1046
Cdd:TIGR00606 565 LLgyfpnKKQLEDWlHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERL 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1047 KDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQ 1126
Cdd:TIGR00606 645 KEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKR 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1127 YTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRN---LELEHKELGER 1203
Cdd:TIGR00606 725 RDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDvtiMERFQMELKDV 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1204 HGDLQQRKAELEELEKVLSTEREALEREQKTNaiatsenqrlrgELDRISFLHQQLKGEYEELHAHTKELKTSLNnsqlE 1283
Cdd:TIGR00606 805 ERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQH------------ELDTVVSKIELNRKLIQDQQEQIQHLKSKTN----E 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1284 LSRWQVRFDELKEQHQSMDISLTKMDNHCELLSRLKGNLEEENHHLLSQIQLLSQQNQMLLEQNMESKEQYHEEQKQYID 1363
Cdd:TIGR00606 869 LKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKE 948
|
810
....*....|....*...
gi 47059089 1364 KLNALRRHKEKLEEKIMD 1381
Cdd:TIGR00606 949 KVKNIHGYMKDIENKIQD 966
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
312-1002 |
3.02e-12 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 72.31 E-value: 3.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 312 RDELDSLREKAN----RVERLEMDLVRCKEKLHD-VDFYKARMEELREDNIILIETKAMLEEQLTASRARSDKVHEL--- 383
Cdd:TIGR00618 186 FAKKKSLHGKAElltlRSQLLTLCTPCMPDTYHErKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLkql 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 384 --EKENLQLKSKLHDLELDRDADKKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSK------NADLSDASRKSFVF 455
Cdd:TIGR00618 266 raRIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKllmkraAHVKQQSSIEEQRR 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 456 ELNECASSRILKLEKENQslQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREkQSNQDLETLSEELI 535
Cdd:TIGR00618 346 LLQTLHSQEIHIRDAHEV--ATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQRE-QATIDTRTSAFRDL 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 536 R--------EKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKDVekenraLHQAVTEAGSKLSQLE 607
Cdd:TIGR00618 423 QgqlahakkQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQ------IHLQETRKKAVVLARL 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 608 LEKQQLHRDLEEAKEKGEQA--------------EALEKELHRLEKENE----QLTKEVTSLKAATEKVEALEHQSQGLE 669
Cdd:TIGR00618 497 LELQEEPCPLCGSCIHPNPArqdidnpgpltrrmQRGEQTYAQLETSEEdvyhQLTSERKQRASLKEQMQEIQQSFSILT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 670 LENRSLRKSLDTLQNVSVQLeglerdkQQLGQENLELRKMVEAmrftsakmaqietENRQLEREKEELRRDVELLKTLSK 749
Cdd:TIGR00618 577 QCDNRSKEDIPNLQNITVRL-------QDLTEKLSEAEDMLAC-------------EQHALLRKLQPEQDLQDVRLHLQQ 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 750 KSERLELSYQSVSAENLQLQHslESSTHKSQALQRELSQLEAERQALrrdLETLQLTHKQLEGAEEdrkaleqEVAQLEK 829
Cdd:TIGR00618 637 CSQELALKLTALHALQLTLTQ--ERVREHALSIRVLPKELLASRQLA---LQKMQSEKEQLTYWKE-------MLAQCQT 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 830 DKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELARCRDvgSKLKELEKDNRDLTKQVTMHTRTLTTLRE 909
Cdd:TIGR00618 705 LLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQAR--TVLKARTEAHFNNNEEVTAALQTGAELSH 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 910 DLVLEKLKSQQLSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQ 989
Cdd:TIGR00618 783 LAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLA 862
|
730
....*....|...
gi 47059089 990 IELQMIKKEHEQL 1002
Cdd:TIGR00618 863 QLTQEQAKIIQLS 875
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
630-1381 |
3.61e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 71.59 E-value: 3.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 630 LEKELHRLEKENEQLTKEVTSL-KAATEKVE---ALEHQSQGLELENRSLRKSLDTlqnvsvqleglerDKQQLGQENLE 705
Cdd:TIGR04523 38 LEKKLKTIKNELKNKEKELKNLdKNLNKDEEkinNSNNKIKILEQQIKDLNDKLKK-------------NKDKINKLNSD 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 706 LRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERlELSYQSVSAENLQLQ-HSLESSTHKsqaLQR 784
Cdd:TIGR04523 105 LSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEK-ELEKLNNKYNDLKKQkEELENELNL---LEK 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 785 ELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEK 864
Cdd:TIGR04523 181 EKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 865 ESRALDKELARcrdvgsKLKELEKDNR---DLTKQVtmhtrtlttlredlvleklksQQLSSELDKLSQELEKvGLSKDL 941
Cdd:TIGR04523 261 EQNKIKKQLSE------KQKELEQNNKkikELEKQL---------------------NQLKSEISDLNNQKEQ-DWNKEL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 942 llqeddghgdgkgktesalKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRqtqeggdkaqnalkrppg 1021
Cdd:TIGR04523 313 -------------------KSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSE------------------ 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1022 kvTSHQEKEawepshkeatmELLRVKDRAIELersnaaLQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTT 1101
Cdd:TIGR04523 356 --SENSEKQ-----------RELEEKQNEIEK------LKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKK 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1102 LQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIR 1181
Cdd:TIGR04523 417 LQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEK 496
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1182 QHSCLKTlhrnlelEHKELGERHGDLQQRKAELEELEKVLSTEReaLEREQKTNAIAT---SENQRLRGELDRISFLHQQ 1258
Cdd:TIGR04523 497 ELKKLNE-------EKKELEEKVKDLTKKISSLKEKIEKLESEK--KEKESKISDLEDelnKDDFELKKENLEKEIDEKN 567
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1259 lkGEYEELHAHTKELKTSLNNSQLELSRWQVRFDELKEQHQSMDISLTKMDNHCELlsrlkgnLEEENHHLLSQIQLLsq 1338
Cdd:TIGR04523 568 --KEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEK-------AKKENEKLSSIIKNI-- 636
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 47059089 1339 qnQMLLEQNMESKEQYHEEQKQYIDKLNALRRHKEKLEEKIMD 1381
Cdd:TIGR04523 637 --KSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDD 677
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
255-841 |
6.26e-12 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 70.93 E-value: 6.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 255 ELADTKARLRRVRQELEEKteqlaDTRHEVDQLVLElqkakqdniqlAADARSARAYRDELDSLREKANRVERLEMDLVR 334
Cdd:pfam05557 3 ELIESKARLSQLQNEKKQM-----ELEHKRARIELE-----------KKASALKRQLDRESDRNQELQKRIRLLEKREAE 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 335 CKEKLHD-VDFYKARMEELREDNIILIETKAMLEEQLTASRARSDKVHEL----EKENLQLKSKLHDLELDR---DADKK 406
Cdd:pfam05557 67 AEEALREqAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELrrqiQRAELELQSTNSELEELQerlDLLKA 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 407 QIEKLLEEYMVLEMAQkQSMKESAHLGWELEQ-LSKNADLSDASRKSfvfelnECASSRILKLEKENQSLQSTIQGLRdt 485
Cdd:pfam05557 147 KASEAEQLRQNLEKQQ-SSLAEAEQRIKELEFeIQSQEQDSEIVKNS------KSELARIPELEKELERLREHNKHLN-- 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 486 slaleesslkygELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKA---------DRARQI 556
Cdd:pfam05557 218 ------------ENIENKLLLKEEVEDLKRKLEREEKYREEAATLELEKEKLEQELQSWVKLAQDtglnlrspeDLSRRI 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 557 KDLEQEKGHLHQAVWSLRerpqvNSTKDVEKENRalhqavteagsklsQLELEKQQLHRDLEEAKEKGEQAEALEKelhR 636
Cdd:pfam05557 286 EQLQQREIVLKEENSSLT-----SSARQLEKARR--------------ELEQELAQYLKKIEDLNKKLKRHKALVR---R 343
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 637 LEKENEQLTKEVTSLKAATE---KVEALEHQSQGLELENRSLRKSLDTLQ----NVSVQLEGLERD----KQQLGQENLE 705
Cdd:pfam05557 344 LQRRVLLLTKERDGYRAILEsydKELTMSNYSPQLLERIEEAEDMTQKMQahneEMEAQLSVAEEElggyKQQAQTLERE 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 706 LRKM-----VEAMRFTSAKMAQIETENRQLEREKEELRRDVEllkTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQ 780
Cdd:pfam05557 424 LQALrqqesLADPSYSKEEVDSLRRKLETLELERQRLREQKN---ELEMELERRCLQGDYDPKKTKVLHLSMNPAAEAYQ 500
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47059089 781 ALQRELSQLEAERQALRRDLETLQLTHKQLEG-AEEDRKALEQEVAQLEKDKKLLEKEARRL 841
Cdd:pfam05557 501 QRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRlPETTSTMNFKEVLDLRKELESAELKNQRL 562
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
621-1325 |
1.80e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 69.71 E-value: 1.80e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 621 KEKGEQAEALEKELHRLEKENEQLtkevtslKAATEKVEALEHQSQGLELENRSLRKSLDtlqNVSVQLEGLERDKQQLG 700
Cdd:PRK03918 172 KEIKRRIERLEKFIKRTENIEELI-------KEKEKELEEVLREINEISSELPELREELE---KLEKEVKELEELKEEIE 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 701 QENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSErlelsyqsvsaENLQLQHSLESSTHKSQ 780
Cdd:PRK03918 242 ELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAE-----------EYIKLSEFYEEYLDELR 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 781 ALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEkEARRLWQQVE-----LKDAILDDS 855
Cdd:PRK03918 311 EIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYE-EAKAKKEELErlkkrLTGLTPEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 856 AAKLSAAEKESRALDKELarcRDVGSKLKELEKDNRDLTKQVtmhtrtlttlrEDLVLEKLKSQQLSSELDklsqELEKV 935
Cdd:PRK03918 390 EKELEELEKAKEEIEEEI---SKITARIGELKKEIKELKKAI-----------EELKKAKGKCPVCGRELT----EEHRK 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 936 GLSKDLLLQEDDghgdgkgktesaLKTTLAMKEEKIVFLEAQVEEKESLsRQLQIELQMIKKEHEQLRQTQEggdkaqna 1015
Cdd:PRK03918 452 ELLEEYTAELKR------------IEKELKEIEEKERKLRKELRELEKV-LKKESELIKLKELAEQLKELEE-------- 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1016 lkrppgKVTSHQEKEAwepshKEATMELLRVKDRAIELErsnaalqAERQLLKEQLQHLETqnvsfssqiltLQKQSAFL 1095
Cdd:PRK03918 511 ------KLKKYNLEEL-----EKKAEEYEKLKEKLIKLK-------GEIKSLKKELEKLEE-----------LKKKLAEL 561
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1096 QEHTTTLQTQTAKLQVENSTLSSQNAalsaqytvlqsqqaakeaehEGLQQQQEQLAAVYEALLqdhkhlgtlyECQSSE 1175
Cdd:PRK03918 562 EKKLDELEEELAELLKELEELGFESV--------------------EELEERLKELEPFYNEYL----------ELKDAE 611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1176 YEALIRQHScLKTLHRNLELEHKELGERHGDLQQRKAELEELEKVLSTErealereqktnaiatsENQRLRGELDRISFL 1255
Cdd:PRK03918 612 KELEREEKE-LKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEE----------------EYEELREEYLELSRE 674
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1256 HQQLKGEYEELHAHTKELKTSLNNSQLELSrwqvRFDELKEQHQSMDISLTKMDNHCELLSRLKGNLEEE 1325
Cdd:PRK03918 675 LAGLRAELEELEKRREEIKKTLEKLKEELE----EREKAKKELEKLEKALERVEELREKVKKYKALLKER 740
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
345-685 |
1.86e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.70 E-value: 1.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 345 YKARMEELREDniilietKAMLEEQLTASRArsdKVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEEYMVLEMAQKQ 424
Cdd:TIGR02168 675 RRREIEELEEK-------IEELEEKIAELEK---ALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQ 744
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 425 SMKESAHLGWELEQLSKNADLSDASRKSFVFELNECAS------SRILKLEKENQSLQSTIQGLR-----------DTSL 487
Cdd:TIGR02168 745 LEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAeieeleAQIEQLKEELKALREALDELRaeltllneeaaNLRE 824
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 488 ALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLH 567
Cdd:TIGR02168 825 RLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELR 904
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 568 qavwslrerpqvnstkDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEK------------GEQAEALEKELH 635
Cdd:TIGR02168 905 ----------------ELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERlseeysltleeaEALENKIEDDEE 968
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 47059089 636 RLEKENEQLTKEVTSLK----AATEKVEALEHQSQGLELENRSLRKSLDTLQNV 685
Cdd:TIGR02168 969 EARRRLKRLENKIKELGpvnlAAIEEYEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
262-961 |
2.02e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 69.76 E-value: 2.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 262 RLRRVRQELEEKTEQLADTRHE-VDQLVLELQKAKQDNIQLAADARS-ARAYRDELDSLREKANRVERLEMdlvrckEKL 339
Cdd:pfam15921 246 QLEALKSESQNKIELLLQQHQDrIEQLISEHEVEITGLTEKASSARSqANSIQSQLEIIQEQARNQNSMYM------RQL 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 340 HDVDFYKARME-ELREdniilietkamleeqltASRARSDKVHELEKENLQLKSKLHDLELDRDADKK-------QIEKL 411
Cdd:pfam15921 320 SDLESTVSQLRsELRE-----------------AKRMYEDKIEELEKQLVLANSELTEARTERDQFSQesgnlddQLQKL 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 412 L------EEYMVLEMAQKQSMkesahlgWELEqlSKNADLSDASRKsfvfELNEcASSRILKLEKENQSLQSTIQGLRDT 485
Cdd:pfam15921 383 LadlhkrEKELSLEKEQNKRL-------WDRD--TGNSITIDHLRR----ELDD-RNMEVQRLEALLKAMKSECQGQMER 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 486 SLA--------LEESSLKYGELEKENQQLSKKIEKLQTQ---LEREKQSNQDLETLSEELIREKEQLQSGMEALKAD--- 551
Cdd:pfam15921 449 QMAaiqgknesLEKVSSLTAQLESTKEMLRKVVEELTAKkmtLESSERTVSDLTASLQEKERAIEATNAEITKLRSRvdl 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 552 RARQIKDLEQEKGHLhqavwslrerpqvnstKDVEKENRALHQAVTEagsKLSQLELEKQQLHRDLEEAKEKGEQAEALE 631
Cdd:pfam15921 529 KLQELQHLKNEGDHL----------------RNVQTECEALKLQMAE---KDKVIEILRQQIENMTQLVGQHGRTAGAMQ 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 632 KELHRLEKENEQLTKEVTSLKAATEKVEAlehqsQGLELENRSLRKSLDTLQNVSVQLEGLeRDKQQLGQENLELRKMVE 711
Cdd:pfam15921 590 VEKAQLEKEINDRRLELQEFKILKDKKDA-----KIRELEARVSDLELEKVKLVNAGSERL-RAVKDIKQERDQLLNEVK 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 712 AMRFTSAKMAQ-IETENRQLEREKEELRRDVELLKTLSKKSE-RLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQL 789
Cdd:pfam15921 664 TSRNELNSLSEdYEVLKRNFRNKSEEMETTTNKLKMQLKSAQsELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQI 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 790 EAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQL--EKDK-----KLLEKEARRLWQQVELKDAILDDSAAKLSAA 862
Cdd:pfam15921 744 DALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVatEKNKmagelEVLRSQERRLKEKVANMEVALDKASLQFAEC 823
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 863 EKESRALDKELARCRDVGS-KLKELE---------------------------KDNRDLTKQVTMHTRTLTTLREDLVLE 914
Cdd:pfam15921 824 QDIIQRQEQESVRLKLQHTlDVKELQgpgytsnssmkprllqpasftrthsnvPSSQSTASFLSHHSRKTNALKEDPTRD 903
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 47059089 915 klkSQQLSSELDKLSQELEKVGLSKdlllQEDDGHGDGKGKTESALK 961
Cdd:pfam15921 904 ---LKQLLQELRSVINEEPTVQLSK----AEDKGRAPSLGALDDRVR 943
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
262-716 |
2.18e-11 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 69.03 E-value: 2.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 262 RLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAyrdeLDSLREKANRVERLEMDLVRCKEKLhd 341
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEK----LLQLLPLYQELEALEAELAELPERL-- 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 342 vDFYKARMEELREdniiLIETKAMLEEQLTasRARSDKVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEEYMVLEMA 421
Cdd:COG4717 149 -EELEERLEELRE----LEEELEELEAELA--ELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEE 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 422 QKQSMKESAHLGWELEQLSKNADLSDASRKSFVFelnecasSRILKLEKENQSLQSTIQGLRDTSLALEE-SSLKYGELE 500
Cdd:COG4717 222 LEELEEELEQLENELEAAALEERLKEARLLLLIA-------AALLALLGLGGSLLSLILTIAGVLFLVLGlLALLFLLLA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 501 KENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALkADRARQIKDLEQEKGHL-HQAVWSLRERPQV 579
Cdd:COG4717 295 REKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLEL-LDRIEELQELLREAEELeEELQLEELEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 580 NSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAkEKGEQAEALEKELHRLEKENEQLTKEvtsLKAATEKVE 659
Cdd:COG4717 374 ALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEEL-LGELEELLEALDEEELEEELEELEEE---LEELEEELE 449
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 47059089 660 ALEHQSQGLELENRSLRKSlDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRFT 716
Cdd:COG4717 450 ELREELAELEAELEQLEED-GELAELLQELEELKAELRELAEEWAALKLALELLEEA 505
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
590-1112 |
2.81e-11 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 69.17 E-value: 2.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 590 RALHQAVTEAGSKLSQLElEKQQLHRDLEEAKEKGEQAEALEKELHRLEKEneqltkevTSLKAATEKVEALEHQSQGLE 669
Cdd:COG4913 238 ERAHEALEDAREQIELLE-PIRELAERYAAARERLAELEYLRAALRLWFAQ--------RRLELLEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 670 LENRSLRKSLDTLQNvsvQLEGLERDKQQLGQENLElrkmveamrftsakmaQIEtenRQLEREKEELRRDVELLKTLSK 749
Cdd:COG4913 309 AELERLEARLDALRE---ELDELEAQIRGNGGDRLE----------------QLE---REIERLERELEERERRRARLEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 750 KSERLELSYQSVSAE----NLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEG--------AEEDR 817
Cdd:COG4913 367 LLAALGLPLPASAEEfaalRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERrksniparLLALR 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 818 KALEQE----------VAQL----EKDKK---------------LL-----EKEARRL-----------WQQVELKD--- 849
Cdd:COG4913 447 DALAEAlgldeaelpfVGELievrPEEERwrgaiervlggfaltLLvppehYAAALRWvnrlhlrgrlvYERVRTGLpdp 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 850 ---AILDDS-AAKLSAAEKESRA-LDKELAR------CRDVgsklKELEKDNRDLTKQVTMHT-RTL------TTLREDL 911
Cdd:COG4913 527 erpRLDPDSlAGKLDFKPHPFRAwLEAELGRrfdyvcVDSP----EELRRHPRAITRAGQVKGnGTRhekddrRRIRSRY 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 912 VL-----EKLKS-----QQLSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKttLAMKEEKIVFLEAQVEEK 981
Cdd:COG4913 603 VLgfdnrAKLAAleaelAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEID--VASAEREIAELEAELERL 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 982 ESLSrqlqIELQMIKKEHEQLRQTQEGGDKAQNALKRppgKVTSHQEKeawepsHKEATMELLRVKDRAIELErsNAALQ 1061
Cdd:COG4913 681 DASS----DDLAALEEQLEELEAELEELEEELDELKG---EIGRLEKE------LEQAEEELDELQDRLEAAE--DLARL 745
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 47059089 1062 AERQLLKEQLQHLETQNVsfssqiltLQKQSAFLQEHTTTLQTQTAKLQVE 1112
Cdd:COG4913 746 ELRALLEERFAAALGDAV--------ERELRENLEERIDALRARLNRAEEE 788
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
545-1296 |
4.35e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.61 E-value: 4.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 545 MEALKADRARQIKDLEQ---EKGHLHqavwslrerpqvnstkdvEKENRALHQAVTEAGSKLSQLELEKQQLhrdleeak 621
Cdd:pfam15921 76 IERVLEEYSHQVKDLQRrlnESNELH------------------EKQKFYLRQSVIDLQTKLQEMQMERDAM-------- 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 622 ekgeqAEALEKELHRLEKENEQLTKEVTSLKAATE-KVEALEHQSQGLElenrSLRKSLDTLQNVSVQLEGLERDKQQLG 700
Cdd:pfam15921 130 -----ADIRRRESQSQEDLRNQLQNTVHELEAAKClKEDMLEDSNTQIE----QLRKMMLSHEGVLQEIRSILVDFEEAS 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 701 QENLELRKMVEAMRFTSAKMA------QIETE-----------NRQLEREKEELRRDVELLktLSKKSERLE--LSYQSV 761
Cdd:pfam15921 201 GKKIYEHDSMSTMHFRSLGSAiskilrELDTEisylkgrifpvEDQLEALKSESQNKIELL--LQQHQDRIEqlISEHEV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 762 SAENLQLQHSLESSTHKSQALQRELSQLEAERQ--ALRRDLETLQLTHKQLEGA-EEDRKALEQEVAQLEKDKKLLEKE- 837
Cdd:pfam15921 279 EITGLTEKASSARSQANSIQSQLEIIQEQARNQnsMYMRQLSDLESTVSQLRSElREAKRMYEDKIEELEKQLVLANSEl 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 838 --ARRLWQQVELKDAILDDSAAKLSA----AEKEsRALDKELARC---RDVGSKL------KELEKDNRDLTK------- 895
Cdd:pfam15921 359 teARTERDQFSQESGNLDDQLQKLLAdlhkREKE-LSLEKEQNKRlwdRDTGNSItidhlrRELDDRNMEVQRleallka 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 896 -----QVTMHTRTLTTLREDLVLEKLKSqqLSSELDKLSQELEKVG---LSKDLLLQEDDghgdgkgKTESALKTTLAMK 967
Cdd:pfam15921 438 mksecQGQMERQMAAIQGKNESLEKVSS--LTAQLESTKEMLRKVVeelTAKKMTLESSE-------RTVSDLTASLQEK 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 968 EEKIVFLEAQVEEKES-LSRQLQiELQMIKKEHEQLRQTQEGGDkaqnALKrppgkvtshqekeaWEPSHKEATMELLRV 1046
Cdd:pfam15921 509 ERAIEATNAEITKLRSrVDLKLQ-ELQHLKNEGDHLRNVQTECE----ALK--------------LQMAEKDKVIEILRQ 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1047 KDRAI-----ELERSNAALQAERQLLKEQL--QHLETQNVsfssQILTLQKQSAFLQehtttLQTQTAKLQVENSTLssq 1119
Cdd:pfam15921 570 QIENMtqlvgQHGRTAGAMQVEKAQLEKEIndRRLELQEF----KILKDKKDAKIRE-----LEARVSDLELEKVKL--- 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1120 naaLSAQYTVLQSQQAAKEaEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSC-LKTLHRNLELEHK 1198
Cdd:pfam15921 638 ---VNAGSERLRAVKDIKQ-ERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMqLKSAQSELEQTRN 713
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1199 ELGERHG--------------DLQQRKAELEELEKVLSTEREALEREQKTNAIATSENQRLRGELDRISFLHQQLKGEYE 1264
Cdd:pfam15921 714 TLKSMEGsdghamkvamgmqkQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELE 793
|
810 820 830
....*....|....*....|....*....|..
gi 47059089 1265 ELHAHTKELKTSLNNSQLELSRWQVRFDELKE 1296
Cdd:pfam15921 794 VLRSQERRLKEKVANMEVALDKASLQFAECQD 825
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
461-1266 |
5.19e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 68.63 E-value: 5.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 461 ASSRILKLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKlqtqlerekqsnqdlETLSEELIREKEQ 540
Cdd:PTZ00121 1062 AKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEE---------------ARKAEEAKKKAED 1126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 541 LQSGMEALKADRARQIKdlEQEKGHLHQAVWSLRerpQVNSTKDVEKENRALHQAVTEAGSKLSQL----ELEKQQLHRD 616
Cdd:PTZ00121 1127 ARKAEEARKAEDARKAE--EARKAEDAKRVEIAR---KAEDARKAEEARKAEDAKKAEAARKAEEVrkaeELRKAEDARK 1201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 617 LEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEglERDK 696
Cdd:PTZ00121 1202 AEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAE--EARK 1279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 697 QQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLK----TLSKKSERLELSYQSVSAENLQLQHSL 772
Cdd:PTZ00121 1280 ADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKkkadAAKKKAEEAKKAAEAAKAEAEAAADEA 1359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 773 ESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEqEVAQLEKDKKLLEkEARRLWQQVELKDAIL 852
Cdd:PTZ00121 1360 EAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKAD-ELKKAAAAKKKAD-EAKKKAEEKKKADEAK 1437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 853 DDSAAKLSAAEKESRALDKELARcrdvGSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQL--SSELDKLSQ 930
Cdd:PTZ00121 1438 KKAEEAKKADEAKKKAEEAKKAE----EAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAkkAAEAKKKAD 1513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 931 ELEKVglskdlllqEDDGHGDGKGKTESALKTTLAMKEEKivfleaqveekeslsrqlqielqmiKKEHEQLRQTQEggd 1010
Cdd:PTZ00121 1514 EAKKA---------EEAKKADEAKKAEEAKKADEAKKAEE-------------------------KKKADELKKAEE--- 1556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1011 kaqnaLKRPPGKVTSHQEKEAWEpshkeatmellrvkDRAIELERSNAALQAERQLLKEQLQHLETQNVsfssqiltlQK 1090
Cdd:PTZ00121 1557 -----LKKAEEKKKAEEAKKAEE--------------DKNMALRKAEEAKKAEEARIEEVMKLYEEEKK---------MK 1608
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1091 QSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQyTVLQSQQAAKEAEHEGLQQQQeqLAAVYEALLQDHKHLGTLYE 1170
Cdd:PTZ00121 1609 AEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAE-EKKKAEELKKAEEENKIKAAE--EAKKAEEDKKKAEEAKKAEE 1685
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1171 CQSSEYEALIRQHSCLKTLHrnlELEHKELGERHGDLQQRKAELEELEKVLSTEREALEREQKTNAIATSEnqrlrGELD 1250
Cdd:PTZ00121 1686 DEKKAAEALKKEAEEAKKAE---ELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDE-----EEKK 1757
|
810
....*....|....*.
gi 47059089 1251 RISFLHQQLKGEYEEL 1266
Cdd:PTZ00121 1758 KIAHLKKEEEKKAEEI 1773
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
633-1126 |
5.91e-11 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 67.84 E-value: 5.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 633 ELHRLEKENEQLTKEVtslkaateKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEA 712
Cdd:pfam05557 3 ELIESKARLSQLQNEK--------KQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQ 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 713 MRFTSAKMAQIETENrQLEREKEELRRDVELLKTLSKKserlELSYQSVSAENLQLQhsLESSTHKSQALQRELSQLEAE 792
Cdd:pfam05557 75 AELNRLKKKYLEALN-KKLNEKESQLADAREVISCLKN----ELSELRRQIQRAELE--LQSTNSELEELQERLDLLKAK 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 793 RQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELkdailddsaaklsaaekesralDKE 872
Cdd:pfam05557 148 ASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELARIPEL----------------------EKE 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 873 LARCRDVGSKLKELEKDNRDLTKQVTMHTRTLTtlREDLVLEKLKSQQLssELDKLSQEL---EKVGLSKDL-------- 941
Cdd:pfam05557 206 LERLREHNKHLNENIENKLLLKEEVEDLKRKLE--REEKYREEAATLEL--EKEKLEQELqswVKLAQDTGLnlrspedl 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 942 ------LLQEDDGHGDGKGKTESALK----------TTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQT 1005
Cdd:pfam05557 282 srrieqLQQREIVLKEENSSLTSSARqlekarreleQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAI 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1006 QEGGDKAQNALKrppgkvTSHQEKEAWEpshkEATMELLRVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQi 1085
Cdd:pfam05557 362 LESYDKELTMSN------YSPQLLERIE----EAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQ- 430
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 47059089 1086 lTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQ 1126
Cdd:pfam05557 431 -ESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEME 470
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
495-934 |
8.62e-11 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 67.10 E-value: 8.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 495 KYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKAdrarQIKDLEQEKGHLHQAVwslr 574
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEA----ELEELREELEKLEKLL---- 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 575 erpqvnSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKE-----VT 649
Cdd:COG4717 126 ------QLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEelqdlAE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 650 SLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQ---------------LGQENLELRKMVEAMR 714
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEArlllliaaallallgLGGSLLSLILTIAGVL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 715 FTSAKMAQIETEnrQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAE----NLQLQHSLESSTHKSQALQRELSQLE 790
Cdd:COG4717 280 FLVLGLLALLFL--LLAREKASLGKEAEELQALPALEELEEEELEELLAAlglpPDLSPEELLELLDRIEELQELLREAE 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 791 AERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEkEARRLWQQVElkdAILDDSAAKLSAAEKEsrALD 870
Cdd:COG4717 358 ELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKE-ELEELEEQLE---ELLGELEELLEALDEE--ELE 431
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47059089 871 KELARCRDvgsKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKsQQLSSELDKLSQELEK 934
Cdd:COG4717 432 EELEELEE---ELEELEEELEELREELAELEAELEQLEEDGELAELL-QELEELKAELRELAEE 491
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
628-1078 |
9.00e-11 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 67.10 E-value: 9.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 628 EALEKELHRLEKENEQLTKevtslkAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELR 707
Cdd:COG4717 49 ERLEKEADELFKPQGRKPE------LNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 708 KMVEAmRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLElsyqsvsAENLQLQHSLESS-THKSQALQREL 786
Cdd:COG4717 123 KLLQL-LPLYQELEALEAELAELPERLEELEERLEELRELEEELEELE-------AELAELQEELEELlEQLSLATEEEL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 787 SQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELK--DAILDDSAAKLSAAEK 864
Cdd:COG4717 195 QDLAEELEELQQRLAELE---EELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLiaAALLALLGLGGSLLSL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 865 ESRALDKELARCRDVGSKLKELEKDNRDLTKQvtmhtrtLTTLREDLVLEKLKSQQLSSELDK--LSQELEKVGLSKDL- 941
Cdd:COG4717 272 ILTIAGVLFLVLGLLALLFLLLAREKASLGKE-------AEELQALPALEELEEEELEELLAAlgLPPDLSPEELLELLd 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 942 LLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLqielqmikKEHEQLRQTQEGGDKAQNALKRPPG 1021
Cdd:COG4717 345 RIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAAL--------EQAEEYQELKEELEELEEQLEELLG 416
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 47059089 1022 KVTSHQEKEAWEpshkEATMELLRVKDRAIELERSNAALQAERQLLKEQLQHLETQN 1078
Cdd:COG4717 417 ELEELLEALDEE----ELEEELEELEEELEELEEELEELREELAELEAELEQLEEDG 469
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
705-1371 |
1.10e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 67.25 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 705 ELRKMVEAMRFTSAKM---AQIETENRQLEREKEELRRDVELLKTLS--KKSERLELsyqsvsaenlqLQHSLESSTHKS 779
Cdd:COG4913 236 DLERAHEALEDAREQIellEPIRELAERYAAARERLAELEYLRAALRlwFAQRRLEL-----------LEAELEELRAEL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 780 QALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRkaLEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKL 859
Cdd:COG4913 305 ARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQ--LEREIERLERELEERERRRARLEALLAALGLPLPASAEEF 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 860 SAAEKESRALDKELArcrdvgSKLKELEKDNRDLTKQVTMHTRTLTTLREDL-VLEKLKSQqLSSELDKLSQEL-EKVGL 937
Cdd:COG4913 383 AALRAEAAALLEALE------EELEALEEALAEAEAALRDLRRELRELEAEIaSLERRKSN-IPARLLALRDALaEALGL 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 938 SK-DL-----LLQEDDGHGDGKGKTESAL---KTTLAMKEEKivflEAQVE---EKESLSRQLQIELQMIKKEHEQLRQT 1005
Cdd:COG4913 456 DEaELpfvgeLIEVRPEEERWRGAIERVLggfALTLLVPPEH----YAAALrwvNRLHLRGRLVYERVRTGLPDPERPRL 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1006 QEGGdkaqnaLkrpPGKVTSHQEkeawePSHKEATMELLRVKDRAI-----ELERSNAALQAERQL-------LKEQLQH 1073
Cdd:COG4913 532 DPDS------L---AGKLDFKPH-----PFRAWLEAELGRRFDYVCvdspeELRRHPRAITRAGQVkgngtrhEKDDRRR 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1074 LETQNV---SFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAKEAEHEglqqqQEQ 1150
Cdd:COG4913 598 IRSRYVlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAERE-----IAE 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1151 LAAVYEALLQDhkhlgtlyecqSSEYEALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKAELEELEKVLSTEREALER 1230
Cdd:COG4913 673 LEAELERLDAS-----------SDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1231 EQKTNAIATSENQRLRGELDRisfLHQQLKgeyEELHAHTKELKTSLNNSQLELSRWQVRFDEL-KEQHQSMDISLTKMD 1309
Cdd:COG4913 742 LARLELRALLEERFAAALGDA---VERELR---ENLEERIDALRARLNRAEEELERAMRAFNREwPAETADLDADLESLP 815
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1310 NHCELLSRLkgnleeENHHLlsqIQLLSQQNQMLLEQNMESKEQYH-------EEQKQYIDKLN-ALRRH 1371
Cdd:COG4913 816 EYLALLDRL------EEDGL---PEYEERFKELLNENSIEFVADLLsklrraiREIKERIDPLNdSLKRI 876
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
625-875 |
1.10e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.94 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 625 EQAEALEKELHRLEKENEQLTKEvtsLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNvsvQLEGLERDKQQLGQENL 704
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKE---LAALKKEEKALLKQLAALERRIAALARRIRALEQ---ELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 705 ELRKMVEAMRFTSAKMAqietenRQLEREKeelRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQR 784
Cdd:COG4942 94 ELRAELEAQKEELAELL------RALYRLG---RQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 785 ELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALeqeVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEK 864
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAERQKL---LARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
250
....*....|.
gi 47059089 865 ESRALDKELAR 875
Cdd:COG4942 242 RTPAAGFAALK 252
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
591-838 |
1.40e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.56 E-value: 1.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 591 ALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEkgeQAEALEKELHRLEKENEQLTKEvtsLKAATEKVEALEHQSQGLEL 670
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKK---EEKALLKQLAALERRIAALARR---IRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 671 ENRSLRKSLDTLQNvsvQLEGLERDKQQLGQENLelrkmvEAMRFTSAKMAQIEtenRQLEREKEELRRDVELLKTLSKK 750
Cdd:COG4942 91 EIAELRAELEAQKE---ELAELLRALYRLGRQPP------LALLLSPEDFLDAV---RRLQYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 751 SERLELSYQSVSAENLQLQHSLEssthKSQALQRELSQLEAERQALRRDLET-LQLTHKQLEGAEEDRKALEQEVAQLEK 829
Cdd:COG4942 159 LAELAALRAELEAERAELEALLA----ELEEERAALEALKAERQKLLARLEKeLAELAAELAELQQEAEELEALIARLEA 234
|
....*....
gi 47059089 830 DKKLLEKEA 838
Cdd:COG4942 235 EAAAAAERT 243
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
653-895 |
1.75e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.17 E-value: 1.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 653 AATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEG-LERDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLE 731
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKqLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 732 REKEELRRDVellktlskkSERLELSYQSVSAENLQLqhsLESSTHKSQALqRELSQLEAERQALRRDLETLQLTHKQLE 811
Cdd:COG4942 97 AELEAQKEEL---------AELLRALYRLGRQPPLAL---LLSPEDFLDAV-RRLQYLKYLAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 812 gaeEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNR 891
Cdd:COG4942 164 ---ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
....
gi 47059089 892 DLTK 895
Cdd:COG4942 241 ERTP 244
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
267-627 |
2.42e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.23 E-value: 2.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 267 RQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAYRDELD-SLREKANRVERLEMDLVRCKEKLHDVDFY 345
Cdd:TIGR02168 676 RREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSrQISALRKDLARLEAEVEQLEERIAQLSKE 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 346 KARMEELREdniiliETKAMLEEQLTASRARSDKVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEEYMVLEMAQKQS 425
Cdd:TIGR02168 756 LTELEAEIE------ELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESL 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 426 MKESAHLGWELEQLSKNAdlsdasrksfvfelnECASSRILKLEKENQSLQSTIQGLRDtslALEESSLKYGELEKENQQ 505
Cdd:TIGR02168 830 ERRIAATERRLEDLEEQI---------------EELSEDIESLAAEIEELEELIEELES---ELEALLNERASLEEALAL 891
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 506 LSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEkghlhqavWSLRERPQVNSTKDV 585
Cdd:TIGR02168 892 LRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEE--------YSLTLEEAEALENKI 963
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47059089 586 EKENRALHQAVTEAGSKLSQL-------------------ELEKQqlHRDLEEAKEKGEQA 627
Cdd:TIGR02168 964 EDDEEEARRRLKRLENKIKELgpvnlaaieeyeelkerydFLTAQ--KEDLTEAKETLEEA 1022
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
716-1016 |
6.94e-10 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 63.55 E-value: 6.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 716 TSAKMAQIETENRQLEREKEELRRDVELLK----TLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEA 791
Cdd:pfam19220 53 LEALLAQERAAYGKLRRELAGLTRRLSAAEgeleELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETE 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 792 ERQALRRDLETLQLthkQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKesrALDK 871
Cdd:pfam19220 133 QNRALEEENKALRE---EAQAAEKALQRAEGELATARERLALLEQENRRLQALSEEQAAELAELTRRLAELET---QLDA 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 872 ELARCRDVGSKLKElekdnrdltkQVTMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEkvglSKDLLLQEddghgd 951
Cdd:pfam19220 207 TRARLRALEGQLAA----------EQAERERAEAQLEEAVEAHRAERASLRMKLEALTARAA----ATEQLLAE------ 266
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47059089 952 gkgktesaLKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNAL 1016
Cdd:pfam19220 267 --------ARNQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQFQEMQRARAEL 323
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
779-1018 |
8.36e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 62.86 E-value: 8.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 779 SQALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAK 858
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELE---KELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 859 LSAAEKESRALDKELARcrdvgsKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEKVGLS 938
Cdd:COG4942 92 IAELRAELEAQKEELAE------LLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 939 KDLLLQEDDghgdgkgktesALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKR 1018
Cdd:COG4942 166 RAELEAERA-----------ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
258-846 |
1.30e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.78 E-value: 1.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 258 DTKARLRRVR---QELEEKTEQLADTRHEVDQLvLELQKAKQDNIQLAADARSARAYRDELDSLREKAnRVERLEMDLVR 334
Cdd:COG4913 222 DTFEAADALVehfDDLERAHEALEDAREQIELL-EPIRELAERYAAARERLAELEYLRAALRLWFAQR-RLELLEAELEE 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 335 CKEKLHDVDfykARMEELREDniilIETKAMLEEQLTASRARS--DKVHELEKENLQLKSKLHDLELDRDADKKQIekll 412
Cdd:COG4913 300 LRAELARLE---AELERLEAR----LDALREELDELEAQIRGNggDRLEQLEREIERLERELEERERRRARLEALL---- 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 413 eeymvlemaqkqsmkesAHLGWELeqlsknadlsDASRKSFVfELNECASSRILKLEKENQSLQSTIQGLRDtslalees 492
Cdd:COG4913 369 -----------------AALGLPL----------PASAEEFA-ALRAEAAALLEALEEELEALEEALAEAEA-------- 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 493 slKYGELEKENQQLSKKIEKLqtqleREKQSNqdletLSEELIREKEQLQsgmEALKADRAR--------QIKDLEQ--- 561
Cdd:COG4913 413 --ALRDLRRELRELEAEIASL-----ERRKSN-----IPARLLALRDALA---EALGLDEAElpfvgeliEVRPEEErwr 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 562 ----------------EKGHLHQA---VWSLRERPQVNSTKdVEKENRALHQAVTEAGSKLSQLELE--------KQQLH 614
Cdd:COG4913 478 gaiervlggfaltllvPPEHYAAAlrwVNRLHLRGRLVYER-VRTGLPDPERPRLDPDSLAGKLDFKphpfrawlEAELG 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 615 R-------DLEEAKEKGEQA-----------EALEKELHRLEKENEQLTKEvtslkaATEKVEALEHQSQGLELEnrslr 676
Cdd:COG4913 557 RrfdyvcvDSPEELRRHPRAitragqvkgngTRHEKDDRRRIRSRYVLGFD------NRAKLAALEAELAELEEE----- 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 677 ksldtLQNVSVQLEGLERDKQQLgQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLEL 756
Cdd:COG4913 626 -----LAEAEERLEALEAELDAL-QERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDLAALEEQLEELEA 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 757 SYQsvsaenlQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETL-----QLTHKQLEG--AEEDRKALEQEV-AQLE 828
Cdd:COG4913 700 ELE-------ELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAedlarLELRALLEErfAAALGDAVERELrENLE 772
|
650
....*....|....*...
gi 47059089 829 KDKKLLEKEARRLWQQVE 846
Cdd:COG4913 773 ERIDALRARLNRAEEELE 790
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
247-707 |
1.63e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 63.14 E-value: 1.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAYRDELDSLREKANrvE 326
Cdd:PRK02224 251 EELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELR--D 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 327 RLEMDLVRCKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLTASRA----RSDKVHELEKENLQLKSKLHDLELDRD 402
Cdd:PRK02224 329 RLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREavedRREEIEELEEEIEELRERFGDAPVDLG 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 403 ADKKQIEKLLEEymvLEMAQKQSMKESAHLGWELEQLSKNADLSDASR----------KSFVFELNECaSSRILKLEKEN 472
Cdd:PRK02224 409 NAEDFLEELREE---RDELREREAELEATLRTARERVEEAEALLEAGKcpecgqpvegSPHVETIEED-RERVEELEAEL 484
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 473 QSLQSTIQGLRDTSLALEESSlkygELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEA----- 547
Cdd:PRK02224 485 EDLEEEVEEVEERLERAEDLV----EAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEkreaa 560
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 548 ----LKADRARQ-IKDLEQEKGHLHQavwslrERPQVNSTKDVEKENRALHQAVTEAGSKLSQLElEKQQLHRdlEEAKE 622
Cdd:PRK02224 561 aeaeEEAEEAREeVAELNSKLAELKE------RIESLERIRTLLAAIADAEDEIERLREKREALA-ELNDERR--ERLAE 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 623 KGEQAEALEKELH--RLEKENEQLTKEVTSLKAATEKVEALEHQSQGL---------ELEN-RSLRKSLDTLQNVSVQLE 690
Cdd:PRK02224 632 KRERKRELEAEFDeaRIEEAREDKERAEEYLEQVEEKLDELREERDDLqaeigavenELEElEELRERREALENRVEALE 711
|
490
....*....|....*..
gi 47059089 691 GLERDKQQLGQENLELR 707
Cdd:PRK02224 712 ALYDEAEELESMYGDLR 728
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
253-665 |
2.06e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.16 E-value: 2.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 253 AVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQkakqdniqlaadarsaRAYRDELDSLREKANRVERLEMDL 332
Cdd:TIGR02169 669 SRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELS----------------QELSDASRKIGEIEKEIEQLEQEE 732
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 333 VRCKEKLhdvdfykarmEELREDNIILIETKAMLEEQLTASRARSDkvhELEKENLQLKSKLHDLEldRDADKKQIEKLL 412
Cdd:TIGR02169 733 EKLKERL----------EELEEDLSSLEQEIENVKSELKELEARIE---ELEEDLHKLEEALNDLE--ARLSHSRIPEIQ 797
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 413 EEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSFVFELNECaSSRILKLEKENQSLQSTIqglRDTSLALEES 492
Cdd:TIGR02169 798 AELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDL-KEQIKSIEKEIENLNGKK---EELEEELEEL 873
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 493 SLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKadraRQIKDLEQEKGHLhqavws 572
Cdd:TIGR02169 874 EAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALE----EELSEIEDPKGED------ 943
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 573 LRERPQVNSTKDVEKENRALHQAVteagsklsqlelekqqlhRDLEEAKEKGEQA-EALEKELHRLEKENEQLTKEVTSL 651
Cdd:TIGR02169 944 EEIPEEELSLEDVQAELQRVEEEI------------------RALEPVNMLAIQEyEEVLKRLDELKEKRAKLEEERKAI 1005
|
410
....*....|....
gi 47059089 652 KAATEKVEALEHQS 665
Cdd:TIGR02169 1006 LERIEEYEKKKREV 1019
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
263-557 |
4.14e-09 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 61.24 E-value: 4.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 263 LRRVRQELEEKTEQLA----DTRHEVDQLVLELQKAKQDNIQLAADARSARAYRDELDSLREKANRVERLEMDLVRCKEK 338
Cdd:pfam05622 64 LQKQLEQLQEENFRLEtardDYRIKCEELEKEVLELQHRNEELTSLAEEAQALKDEMDILRESSDKVKKLEATVETYKKK 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 339 LHDVDFYKARMEELREDNIILIETKAMLEEQLtaSRARSDKVH-ELEKENLQLKSKLHDLELDRdADKKQIE--KLLEEY 415
Cdd:pfam05622 144 LEDLGDLRRQVKLLEERNAEYMQRTLQLEEEL--KKANALRGQlETYKRQVQELHGKLSEESKK-ADKLEFEykKLEEKL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 416 MVLE------MAQKQSMKE-----------SAHLGWELEQLSKNADLSD-ASRKSFVFELNEcassRILKLEKENQSLQS 477
Cdd:pfam05622 221 EALQkekerlIIERDTLREtneelrcaqlqQAELSQADALLSPSSDPGDnLAAEIMPAEIRE----KLIRLQHENKMLRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 478 TIQGLRDTSLA-----LEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEAL-KAD 551
Cdd:pfam05622 297 GQEGSYRERLTelqqlLEDANRRKNELETQNRLANQRILELQQQVEELQKALQEQGSKAEDSSLLKQKLEEHLEKLhEAQ 376
|
....*.
gi 47059089 552 RARQIK 557
Cdd:pfam05622 377 SELQKK 382
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1625-2001 |
4.18e-09 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 62.11 E-value: 4.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1625 PPPrnGPVSQETIQKKGAASTHTGVRPHSASPSSEMvtleefleESNRGGSPTHDTPScrddllsdyfrkAHDPPALGGQ 1704
Cdd:PHA03307 71 PPP--GPGTEAPANESRSTPTWSLSTLAPASPAREG--------SPTPPGPSSPDPPP------------PTPPPASPPP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1705 PGPPARKDGAKMPTSFVAPTIKMSINTSEGQQLKPGHYVkpnlRPSEAEALAGMPSRQVQPPQslslgrprqttmtqnch 1784
Cdd:PHA03307 129 SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAA----SSRQAALPLSSPEETARAPS----------------- 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1785 mPVSRSASLSRAFSLASADLLRASGPEACRPESPQ-KPGGHEAAGARETSTHSL----QGSHILARERTPIvgkadsPSP 1859
Cdd:PHA03307 188 -SPPAEPPPSTPPAAASPRPPRRSSPISASASSPApAPGRSAADDAGASSSDSSssesSGCGWGPENECPL------PRP 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1860 GQGTrgrpLDTRRFSLAPPK-EERLAPLQQSATAPALATGCSSGSNPqiqHFSPTVAPAVRTKSKVPQHSGEVATVAPvr 1938
Cdd:PHA03307 261 APIT----LPTRIWEASGWNgPSSRPGPASSSSSPRERSPSPSPSSP---GSGPAPSSPRASSSSSSSRESSSSSTSS-- 331
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 1939 pglgTSEGDGGPGhgyseglltKSPGRSSDLPPHVKRGPDDFSQGSSSKSTPASPEPGGDPQT 2001
Cdd:PHA03307 332 ----SSESSRGAA---------VSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAAS 381
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
247-664 |
1.02e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 60.42 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEQLADTRhevdqlvLELQKAKQDNIQLAADARSARAYRDELDSLREkANRVE 326
Cdd:TIGR04523 239 QEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQ-------KELEQNNKKIKELEKQLNQLKSEISDLNNQKE-QDWNK 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 327 RLEMDLVRCKEKLHDVDfykarmEELREDNII---LIETKAMLEEQLTASraRSDKVhELEKENLQLKSKLHDLELDRDA 403
Cdd:TIGR04523 311 ELKSELKNQEKKLEEIQ------NQISQNNKIisqLNEQISQLKKELTNS--ESENS-EKQRELEEKQNEIEKLKKENQS 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 404 DKKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSfVFELNECASSRILKLEKENQSLQSTIQGLR 483
Cdd:TIGR04523 382 YKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIER-LKETIIKNNSEIKDLTNQDSVKELIIKNLD 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 484 DTSLALEES----SLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEAL---KADRARQI 556
Cdd:TIGR04523 461 NTRESLETQlkvlSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLeseKKEKESKI 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 557 KDLEQEKGHLHQAV-WSLRERPQVNSTKDVEK---ENRALHQAVTEAGSKLSQLELEKQQLHRDLEeakEKGEQAEALEK 632
Cdd:TIGR04523 541 SDLEDELNKDDFELkKENLEKEIDEKNKEIEElkqTQKSLKKKQEEKQELIDQKEKEKKDLIKEIE---EKEKKISSLEK 617
|
410 420 430
....*....|....*....|....*....|..
gi 47059089 633 ELHRLEKENEQLTKEVTSLKAATEKVEALEHQ 664
Cdd:TIGR04523 618 ELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQ 649
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
463-848 |
1.11e-08 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 60.25 E-value: 1.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 463 SRILKLEKE-----NQSLQSTIQGLRDTSLAlEESSLKYGELEKENQQLSKK----IEKLQTQLE------REKQSNQDL 527
Cdd:pfam06160 10 KEIDELEERknelmNLPVQEELSKVKKLNLT-GETQEKFEEWRKKWDDIVTKslpdIEELLFEAEelndkyRFKKAKKAL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 528 ETLSEELIREKEQLQSGMEALKadrarQIKDLEQEkghLHQAVWSLRERPQvNSTKDVEKENRALHQAVTEAGSKLSQLE 607
Cdd:pfam06160 89 DEIEELLDDIEEDIKQILEELD-----ELLESEEK---NREEVEELKDKYR-ELRKTLLANRFSYGPAIDELEKQLAEIE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 608 LEKQQLhrdlEEAKEKG------EQAEALEKELHRLEKENEQ----LTKEVTSLKAATEKVEAL--EHQSQGLELENRSL 675
Cdd:pfam06160 160 EEFSQF----EELTESGdylearEVLEKLEEETDALEELMEDipplYEELKTELPDQLEELKEGyrEMEEEGYALEHLNV 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 676 RKSLDTLQnvsvqlEGLERDKQQLgqENLELRKMVEAMRFTSAkmaQIETENRQLEREKEElRRDVEllktlsKKSERLE 755
Cdd:pfam06160 236 DKEIQQLE------EQLEENLALL--ENLELDEAEEALEEIEE---RIDQLYDLLEKEVDA-KKYVE------KNLPEIE 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 756 LSYQSVSAENLQLQHSL----------ESSTHKSQALQRELSQLEAERQALRRDLETLQLTH-----------KQLEGAE 814
Cdd:pfam06160 298 DYLEHAEEQNKELKEELervqqsytlnENELERVRGLEKQLEELEKRYDEIVERLEEKEVAYselqeeleeilEQLEEIE 377
|
410 420 430
....*....|....*....|....*....|....
gi 47059089 815 EDRKALEQEVAQLEKDkkllEKEARRLWQQVELK 848
Cdd:pfam06160 378 EEQEEFKESLQSLRKD----ELEAREKLDEFKLE 407
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
461-662 |
1.36e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.01 E-value: 1.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 461 ASSRILKLEKENQSLQSTIQGLRDtslALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQ 540
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEK---ELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 541 LQSGMEALKADRARQIKDLEQEKGH-----------LHQAVWSLR--------ERPQVNSTKDVEKENRALHQAVTEAGS 601
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQpplalllspedFLDAVRRLQylkylapaRREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47059089 602 KLSQLELEKQQLHRDLEEAKEKGEQAEA-LEKELHRLEKENEQLTKEVTSLKAATEKVEALE 662
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLArLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
255-661 |
1.40e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.08 E-value: 1.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 255 ELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARsarayrdELDSLREKANRVERLEMDLV- 333
Cdd:PRK03918 311 EIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHE-------LYEEAKAKKEELERLKKRLTg 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 334 RCKEKL-HDVDFYKARMEELREDNIILIETKAMLEeqlTASRARSDKVHELEK---------------ENLQLKSK---- 393
Cdd:PRK03918 384 LTPEKLeKELEELEKAKEEIEEEISKITARIGELK---KEIKELKKAIEELKKakgkcpvcgrelteeHRKELLEEytae 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 394 LHDLELDRDADKKQIEKLLEEYMVLEMAQKQ-----SMKESAHLGWELEQLSKNADLSDASRKSFVFELNEcasSRILKL 468
Cdd:PRK03918 461 LKRIEKELKEIEEKERKLRKELRELEKVLKKeseliKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLK---EKLIKL 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 469 EKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSN-QDLETLSEELI------REKEQL 541
Cdd:PRK03918 538 KGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERlKELEPFYNEYLelkdaeKELERE 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 542 QSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLE-LEKQ--------- 611
Cdd:PRK03918 618 EKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEeLEKRreeikktle 697
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 47059089 612 QLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLK-AATEKVEAL 661
Cdd:PRK03918 698 KLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKeRALSKVGEI 748
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
456-744 |
1.52e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 60.31 E-value: 1.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 456 ELNECASsRILKLEKENQSLQSTIQGLRDTSLALEESsLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELi 535
Cdd:COG4913 618 ELAELEE-ELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDDLAALEEQL- 694
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 536 rekEQLQsgmealkadraRQIKDLEQEKGHLHQAVWSLRErpQVNSTKDVEKENRALHQAVTEAGSKLSQLELEkQQLHR 615
Cdd:COG4913 695 ---EELE-----------AELEELEEELDELKGEIGRLEK--ELEQAEEELDELQDRLEAAEDLARLELRALLE-ERFAA 757
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 616 DLEEAKEKgEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELE-NRSLRKSLDTLQNvsvqlEGLER 694
Cdd:COG4913 758 ALGDAVER-ELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLEsLPEYLALLDRLEE-----DGLPE 831
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 47059089 695 DKQQLgqenLELRKmveamRFTSAKMAQIeteNRQLEREKEELRRDVELL 744
Cdd:COG4913 832 YEERF----KELLN-----ENSIEFVADL---LSKLRRAIREIKERIDPL 869
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1038-1394 |
2.09e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.57 E-value: 2.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1038 EATME-LLRVKDRAIELER-----SNAALQAER-QLLKEQLQHLETQnvSFSSQILTLQKQSAflqehttTLQTQTAKLQ 1110
Cdd:COG1196 182 EATEEnLERLEDILGELERqleplERQAEKAERyRELKEELKELEAE--LLLLKLRELEAELE-------ELEAELEELE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1111 VENSTLSSQNAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLgtlyecqsseyEALIRQhsclktLH 1190
Cdd:COG1196 253 AELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARL-----------EERRRE------LE 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1191 RNLELEHKELGERHGDLQQRKAELEELEKVLSTEREALEREQKTNAIATSENQRLRGELDRISFLHQQLKGEYEELHAHT 1270
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1271 KELKTSLNNSQLELSRWQVRFDELKEQHQSMDISLTKMDnhcELLSRLKGNLEEENHHLLSQIQLLSQQNQMLLEQNMES 1350
Cdd:COG1196 396 AELAAQLEELEEAEEALLERLERLEEELEELEEALAELE---EEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 47059089 1351 KEQYHEEQKQYIDKLNALRRHKEKLEEKIMDQYKFYDPAPKKKN 1394
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLL 516
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
247-754 |
2.16e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 59.68 E-value: 2.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEQLA-------------DTRHEVDQLVLELQKAKQDNIQLAADARSARAYRD 313
Cdd:TIGR00606 591 DRLAKLNKELASLEQNKNHINNELESKEEQLSsyedklfdvcgsqDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFIT 670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 314 ELD---------------SLREKANRVERLEMDLVRCKEKLHDVDFYKARMEELREDNIILIETKA----MLEEQLTASR 374
Cdd:TIGR00606 671 QLTdenqsccpvcqrvfqTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQsiidLKEKEIPELR 750
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 375 ARSDKV--------HELEKENLQLKSKLHDLELDRD--ADKKQIEKLLEEYMVLE--MAQKQSMKESAHLGWELEQLSKN 442
Cdd:TIGR00606 751 NKLQKVnrdiqrlkNDIEEQETLLGTIMPEEESAKVclTDVTIMERFQMELKDVErkIAQQAAKLQGSDLDRTVQQVNQE 830
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 443 ADLSDASRKSFVFELnECASSRILKLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQ 522
Cdd:TIGR00606 831 KQEKQHELDTVVSKI-ELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKE 909
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 523 SNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQvnstkdvEKENRALHQAVTEAGSK 602
Cdd:TIGR00606 910 QDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQ-------DGKDDYLKQKETELNTV 982
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 603 LSQLElEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKV-----EALEHQSQGLELENRSLRK 677
Cdd:TIGR00606 983 NAQLE-ECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELkqhlkEMGQMQVLQMKQEHQKLEE 1061
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 678 SLDTLQNVSV----QLEGLERDKQQLGQE--NLELRKMVEAMRFTSAKMAQIETENRQLEREKEELrrDVELLKTLSKKS 751
Cdd:TIGR00606 1062 NIDLIKRNHVlalgRQKGYEKEIKHFKKElrEPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTL--DQAIMKFHSMKM 1139
|
...
gi 47059089 752 ERL 754
Cdd:TIGR00606 1140 EEI 1142
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1538-1951 |
2.61e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.41 E-value: 2.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1538 SDDNLCEPSSEPDGPYHRQQASRPNSLESSRNASSNSsplslkGSSDHLHSRCESFSSADLIPSRDPATLSRDGNT-SGR 1616
Cdd:PHA03307 61 ACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAP------ASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPaPDL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1617 GLLGRHEYPPPRNGPVSQETIQKKGAASTHTGVRPHSASPSSEMVtleeflEESNRGGSPthdtPSCRDDLLSDYFRKAH 1696
Cdd:PHA03307 135 SEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSP------EETARAPSS----PPAEPPPSTPPAAASP 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1697 DPPALG---GQPGPPARKDGAKMPtSFVAPTIKMSINTSEGQQLKPGhyvkpnlrpSEAEALAGMPSRQVQPPQSLSLGR 1773
Cdd:PHA03307 205 RPPRRSspiSASASSPAPAPGRSA-ADDAGASSSDSSSSESSGCGWG---------PENECPLPRPAPITLPTRIWEASG 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1774 PrqttmtqncHMPVSRSASLSRAFSLASADLLRASGPEACRPESPQKPGGHEAAGARETSTHSLQGSHILARERTPIVGK 1853
Cdd:PHA03307 275 W---------NGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGP 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1854 ADSPSPGQGtRGRP-LDTRRFSLAPPKEERLAPLQQSATAPALATGCSSGSNPQIQHFSPTVAPAVRTKSkVPQHSGEVA 1932
Cdd:PHA03307 346 SPSRSPSPS-RPPPpADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRP-SPLDAGAAS 423
|
410
....*....|....*....
gi 47059089 1933 TVAPVRPGLGTSEGDGGPG 1951
Cdd:PHA03307 424 GAFYARYPLLTPSGEPWPG 442
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
473-835 |
3.16e-08 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 58.91 E-value: 3.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 473 QSLQSTIQGLRDTSLALEESSlKYGELEKENQQLSKkieKLQTQLEREKQ------SNQDLETLSEELIREKEQL--QSG 544
Cdd:PRK10929 48 EALQSALNWLEERKGSLERAK-QYQQVIDNFPKLSA---ELRQQLNNERDeprsvpPNMSTDALEQEILQVSSQLleKSR 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 545 MEALKADRARQIKDleqekghlhqavwSLRERPQVNstkdvekenralhqavTEAGSKLSQLELEKQQLHRD---LEEAK 621
Cdd:PRK10929 124 QAQQEQDRAREISD-------------SLSQLPQQQ----------------TEARRQLNEIERRLQTLGTPntpLAQAQ 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 622 EKGEQAEALEKELHRLEKENEQLT----KEVTSLKAatekvEALEHQSQGLELENRSLRKSLDTL--QNVSVQLEGLERD 695
Cdd:PRK10929 175 LTALQAESAALKALVDELELAQLSannrQELARLRS-----ELAKKRSQQLDAYLQALRNQLNSQrqREAERALESTELL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 696 KQQLGQ------ENLEL-RKMVEAMRFTSAKMAQIETENRQLEREKEELRRdveLLKTLSKKSERLELSyqSVSAENLQL 768
Cdd:PRK10929 250 AEQSGDlpksivAQFKInRELSQALNQQAQRMDLIASQQRQAASQTLQVRQ---ALNTLREQSQWLGVS--NALGEALRA 324
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47059089 769 QHSLESSTHKSQALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQE-----VAQLEKDKKLLE 835
Cdd:PRK10929 325 QVARLPEMPKPQQLDTEMAQLRVQRLRYEDLLNKQP---QLRQIRQADGQPLTAEqnrilDAQLRTQRELLN 393
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
464-1157 |
3.56e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 59.08 E-value: 3.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 464 RILKLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQS-----NQDLETLSEELIREK 538
Cdd:pfam12128 242 EFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEkrdelNGELSAADAAVAKDR 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 539 EQLqsgmEALKAD-RARQIKDLEQEKGHLHQAvwslrerPQVNST-KDVEKENRAL---HQAVTEAGSKLSQLEleKQQL 613
Cdd:pfam12128 322 SEL----EALEDQhGAFLDADIETAAADQEQL-------PSWQSElENLEERLKALtgkHQDVTAKYNRRRSKI--KEQN 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 614 HRDLEEAKEkgeqaealekelhRLEKENEQLTKEVTSLKAATEKVE-ALEHQsqgLELENRSLRksldtlqnvsvqlEGL 692
Cdd:pfam12128 389 NRDIAGIKD-------------KLAKIREARDRQLAVAEDDLQALEsELREQ---LEAGKLEFN-------------EEE 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 693 ERDKQQLGQENLELrkmvEAMRFTSAKMAQIETENRQLEREKEELrrdvellktlskkserlelsyqsvsaenlqlqhsl 772
Cdd:pfam12128 440 YRLKSRLGELKLRL----NQATATPELLLQLENFDERIERAREEQ----------------------------------- 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 773 ESSTHKSQALQRELSQLEAER-QALRRdletLQLTHKQL-EGAEEDRKALEQEVAQLEKDKKLLEKEARrLWQQvelkda 850
Cdd:pfam12128 481 EAANAEVERLQSELRQARKRRdQASEA----LRQASRRLeERQSALDELELQLFPQAGTLLHFLRKEAP-DWEQ------ 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 851 ilddSAAKLSAAEKESRA-LDKELARCRD--------VGSKLKELE-KDNRDLTKQVTmhtRTLTTLREDLVLEKLKSQQ 920
Cdd:pfam12128 550 ----SIGKVISPELLHRTdLDPEVWDGSVggelnlygVKLDLKRIDvPEWAASEEELR---ERLDKAEEALQSAREKQAA 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 921 LSSELDKLSQELEKVGL-----------SKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQ-----------V 978
Cdd:pfam12128 623 AEEQLVQANGELEKASReetfartalknARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQlkqldkkhqawL 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 979 EEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLRVKDRAIELERSNA 1058
Cdd:pfam12128 703 EEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLER 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1059 ALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTlssQNAALSAQYTVLQSQQAAKE 1138
Cdd:pfam12128 783 KIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKL---RRAKLEMERKASEKQQVRLS 859
|
730
....*....|....*....
gi 47059089 1139 AEHEGLQQQQEQLAAVYEA 1157
Cdd:pfam12128 860 ENLRGLRCEMSKLATLKED 878
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
592-939 |
4.22e-08 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 57.98 E-value: 4.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 592 LHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEqltkevTSLKAATEKVEALEHQSQGLELE 671
Cdd:pfam07888 36 LEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELK------EELRQSREKHEELEEKYKELSAS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 672 NRSLRKSLDTLQNVS----VQLEGLERDKQQLGQENL----ELRKMVEAMRFTSAKMAQIETENRQLErekEELRRDVEL 743
Cdd:pfam07888 110 SEELSEEKDALLAQRaaheARIRELEEDIKTLTQRVLeretELERMKERAKKAGAQRKEEEAERKQLQ---AKLQQTEEE 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 744 LKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEG---------AE 814
Cdd:pfam07888 187 LRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGlgeelssmaAQ 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 815 EDRKALEQEVAQLE--------KDKKLLEKEARRLWQQ--------VEL-KDAILDDSAAKLSAAEK------ESRALDK 871
Cdd:pfam07888 267 RDRTQAELHQARLQaaqltlqlADASLALREGRARWAQeretlqqsAEAdKDRIEKLSAELQRLEERlqeermEREKLEV 346
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47059089 872 ELARCRDvgSKLKELEKDNRDLTKQVTmHTRTLTTLREDLVLEKlksQQLSSELDKLSQELEKVGLSK 939
Cdd:pfam07888 347 ELGREKD--CNRVQLSESRRELQELKA-SLRVAQKEKEQLQAEK---QELLEYIRQLEQRLETVADAK 408
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
247-660 |
5.44e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.41 E-value: 5.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAYRDELDSLREKANRVE 326
Cdd:COG1196 400 AQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAAL 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 327 RLEMDLVRCKEKLHDVDFYKARMEELREDNIILIETKAMLE--EQLTASRARSDKVHELEKENLQLKSKLHDLELDRDAD 404
Cdd:COG1196 480 AELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVA 559
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 405 KKQIEKLLE------EYMVLEMAQKQSMKESAHLGWELEQ--LSKNADLSDASRKSFVFELNECASSRI-LKLEKENQSL 475
Cdd:COG1196 560 AAAIEYLKAakagraTFLPLDKIRARAALAAALARGAIGAavDLVASDLREADARYYVLGDTLLGRTLVaARLEAALRRA 639
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 476 QSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQ 555
Cdd:COG1196 640 VTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEE 719
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 556 IKDLEQEKghlhQAVWSLRERpqvnstkdVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEK----G------- 624
Cdd:COG1196 720 ELEEEALE----EQLEAEREE--------LLEELLEEEELLEEEALEELPEPPDLEELERELERLEREiealGpvnllai 787
|
410 420 430
....*....|....*....|....*....|....*.
gi 47059089 625 EQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEA 660
Cdd:COG1196 788 EEYEELEERYDFLSEQREDLEEARETLEEAIEEIDR 823
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
490-802 |
6.06e-08 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 57.83 E-value: 6.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 490 EESSLKYGELEKEnQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQsgmealKADRARQIKDLEQEKGHLHQA 569
Cdd:pfam17380 303 QEKEEKAREVERR-RKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIR------QEERKRELERIRQEEIAMEIS 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 570 VWSLRERPQVNSTKDVEKENRALhqavtEAGSKLSQLELEKQQLHRD--LEEAKEKGEQAEALEKELHRLEKENEQLTKE 647
Cdd:pfam17380 376 RMRELERLQMERQQKNERVRQEL-----EAARKVKILEEERQRKIQQqkVEMEQIRAEQEEARQREVRRLEEERAREMER 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 648 VtslkaateKVEALEHQSQgleleNRSLRKSLDTLQNVSVQLEGLERDKQQLGqenlELRKMVEAMRFTSAKMAQIETEN 727
Cdd:pfam17380 451 V--------RLEEQERQQQ-----VERLRQQEEERKRKKLELEKEKRDRKRAE----EQRRKILEKELEERKQAMIEEER 513
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47059089 728 RQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKsqalQRELSQLEAERQALRRDLET 802
Cdd:pfam17380 514 KRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEE----RSRLEAMEREREMMRQIVES 584
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
498-1078 |
6.15e-08 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 57.83 E-value: 6.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 498 ELEKENQQLSKKIEKLQTQLEREKQSNQDLETlSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRErp 577
Cdd:pfam05557 24 EHKRARIELEKKASALKRQLDRESDRNQELQK-RIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEKESQLA-- 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 578 QVNSTKD-VEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALekelhrlekeNEQLTKEVTSLKAATE 656
Cdd:pfam05557 101 DAREVIScLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQL----------RQNLEKQQSSLAEAEQ 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 657 KVEALEHQSQGLELENRSLRKSLDTLqnvsVQLEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEE 736
Cdd:pfam05557 171 RIKELEFEIQSQEQDSEIVKNSKSEL----ARIPELEKELERLREHNKHLNENIENKLLLKEEVEDLKRKLEREEKYREE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 737 LrrdvellKTLSKKSERLELSYQSvsAENLQLQHSLESSThkSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAeed 816
Cdd:pfam05557 247 A-------ATLELEKEKLEQELQS--WVKLAQDTGLNLRS--PEDLSRRIEQLQQREIVLKEENSSLTSSARQLEKA--- 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 817 RKALEQEVAQ-------LEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKE---SRALDKELARCRDVGSKLKEL 886
Cdd:pfam05557 313 RRELEQELAQylkkiedLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILESYDKEltmSNYSPQLLERIEEAEDMTQKM 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 887 EKDNRDLTKQVTMHTRTLTTLredlvleKLKSQQLSSELDKLSQelekvglskdlllQEDDGHGDGKGKTESALKttlam 966
Cdd:pfam05557 393 QAHNEEMEAQLSVAEEELGGY-------KQQAQTLERELQALRQ-------------QESLADPSYSKEEVDSLR----- 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 967 keEKIVFLEAQVEEKESLSRQLQIELqmikkEHEQLRQTQEGGDKaqnalkrppgKVTSHQEKEAWEpsHKEATMELLRv 1046
Cdd:pfam05557 448 --RKLETLELERQRLREQKNELEMEL-----ERRCLQGDYDPKKT----------KVLHLSMNPAAE--AYQQRKNQLE- 507
|
570 580 590
....*....|....*....|....*....|..
gi 47059089 1047 kdraielersnaALQAERQLLKEQLQHLETQN 1078
Cdd:pfam05557 508 ------------KLQAEIERLKRLLKKLEDDL 527
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
312-908 |
6.44e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 57.93 E-value: 6.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 312 RDELDSLREKANRVERLEMDLVRCKEKLHDVDFYKARMEELREdniiliETKAMLEEQLTASRArsdkvhelekenlQLK 391
Cdd:pfam12128 240 RPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQ------ETSAELNQLLRTLDD-------------QWK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 392 SKLHDLELDRDADKKQIEKLLEEYMVLEMAQKQSMKEsahlgwELEQLSKNADLSDasrkSFVFELNEcASSRILKLEKE 471
Cdd:pfam12128 301 EKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDA------DIETAAADQEQLP----SWQSELEN-LEERLKALTGK 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 472 NQSLQSTIQGLRdtSLALEESSLKYGELEKENQQLSKKIEKLQTQLE-----REKQSNQDLETLSEELIREKEQLQSGME 546
Cdd:pfam12128 370 HQDVTAKYNRRR--SKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEddlqaLESELREQLEAGKLEFNEEEYRLKSRLG 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 547 ALKA--DRARQIKDLEQEKGHLHQAVWSLRERpQVNSTKDVEKENRALHQAVT---EAGSKLSQLELEKQQLHRDLEEAK 621
Cdd:pfam12128 448 ELKLrlNQATATPELLLQLENFDERIERAREE-QEAANAEVERLQSELRQARKrrdQASEALRQASRRLEERQSALDELE 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 622 EKGEQA-----EALEKE----------------LHRLE---KENEQLTKEVTSLKAATEKVEALEHQS-----QGLELEN 672
Cdd:pfam12128 527 LQLFPQagtllHFLRKEapdweqsigkvispelLHRTDldpEVWDGSVGGELNLYGVKLDLKRIDVPEwaaseEELRERL 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 673 RSLRKSLDTLQNVSVQLEglerdkQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRD------------ 740
Cdd:pfam12128 607 DKAEEALQSAREKQAAAE------EQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKknkalaerkdsa 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 741 VELLKTLSKKSERLELSYQSVSAEnlQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHK-QLEGAEEDRKA 819
Cdd:pfam12128 681 NERLNSLEAQLKQLDKKHQAWLEE--QKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKaELKALETWYKR 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 820 L-------EQEVAQLEKDKKLLEKEARRL------------WQQvELKDAILDDSAAKLSAAEKESRALDKELARC-RDV 879
Cdd:pfam12128 759 DlaslgvdPDVIAKLKREIRTLERKIERIavrrqevlryfdWYQ-ETWLQRRPRLATQLSNIERAISELQQQLARLiADT 837
|
650 660
....*....|....*....|....*....
gi 47059089 880 GSKLKELEKDNRDLTKQVTMHTRTLTTLR 908
Cdd:pfam12128 838 KLRRAKLEMERKASEKQQVRLSENLRGLR 866
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
519-841 |
6.92e-08 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 58.04 E-value: 6.92e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 519 REKQsnqdLETLSEELIREKEQLqsgmealkADRARQIKDLEQEKGHLHQAVWSlreRPQVNSTKDVEKENRALHQAVTE 598
Cdd:PRK04863 784 REKR----IEQLRAEREELAERY--------ATLSFDVQKLQRLHQAFSRFIGS---HLAVAFEADPEAELRQLNRRRVE 848
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 599 AGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLekENEQLTKEVTSLKAATEKVEALEH--QSQGLELEnrSLR 676
Cdd:PRK04863 849 LERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLL--ADETLADRVEEIREQLDEAEEAKRfvQQHGNALA--QLE 924
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 677 KSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMR--------FTSAKMAQIETENRQLErekEELRRDVELLKTLS 748
Cdd:PRK04863 925 PIVSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTevvqrrahFSYEDAAEMLAKNSDLN---EKLRQRLEQAEQER 1001
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 749 KKSERLELSYQSVSAENLQLQHSLESS-THKSQ---ALQRELSQL-------EAERQALRRDletlQLtHKQLEGAEEDR 817
Cdd:PRK04863 1002 TRAREQLRQAQAQLAQYNQVLASLKSSyDAKRQmlqELKQELQDLgvpadsgAEERARARRD----EL-HARLSANRSRR 1076
|
330 340
....*....|....*....|....
gi 47059089 818 KALEQEVAQLEKDKKLLEKEARRL 841
Cdd:PRK04863 1077 NQLEKQLTFCEAEMDNLTKKLRKL 1100
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
309-820 |
8.07e-08 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 57.60 E-value: 8.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 309 RAYRDELDSLREKANRVERLEMDLVRCKEKLHDVdfYKARMEElredniilietKAMLEEQLTASRARSDKVHELEKENL 388
Cdd:PRK01156 193 KSSNLELENIKKQIADDEKSHSITLKEIERLSIE--YNNAMDD-----------YNNLKSALNELSSLEDMKNRYESEIK 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 389 QLKSKLHDLELDRDadkkQIEKLLEEYMVLE----MAQKQSMKESAHLGWELEQLSKNADLSDASRKSFvfELNECASSR 464
Cdd:PRK01156 260 TAESDLSMELEKNN----YYKELEERHMKIIndpvYKNRNYINDYFKYKNDIENKKQILSNIDAEINKY--HAIIKKLSV 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 465 ILKLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLERekqsnqdletLSEELIREKEQLQSG 544
Cdd:PRK01156 334 LQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIER----------MSAFISEILKIQEID 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 545 MEALKADRA---RQIKDLEQEKGHLHQAVWSLRER-----------------PQVNSTKDVEKENRAlhqaVTEAGSKLS 604
Cdd:PRK01156 404 PDAIKKELNeinVKLQDISSKVSSLNQRIRALRENldelsrnmemlngqsvcPVCGTTLGEEKSNHI----INHYNEKKS 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 605 QLELEKQQLHRDLEEAKEK------------GEQAEALEKELHRLEKENEQLTK---EVTSLKAATEKVEALEHQSQGLE 669
Cdd:PRK01156 480 RLEEKIREIEIEVKDIDEKivdlkkrkeyleSEEINKSINEYNKIESARADLEDikiKINELKDKHDKYEEIKNRYKSLK 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 670 LENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMR-----------FTSAKMAQIETENRQLE------- 731
Cdd:PRK01156 560 LEDLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQeieigfpddksYIDKSIREIENEANNLNnkyneiq 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 732 ---REKEELRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALR----------- 797
Cdd:PRK01156 640 enkILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRtrinelsdrin 719
|
570 580
....*....|....*....|....*.
gi 47059089 798 ---RDLETLQLTHKQLEGAEEDRKAL 820
Cdd:PRK01156 720 dinETLESMKKIKKAIGDLKRLREAF 745
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
418-1216 |
9.04e-08 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 57.78 E-value: 9.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 418 LEMAQKQSMKESAHLgweleqlsknadLSDASRKSFVFElnecassRILKLEKENQSLQSTIQGLRDTSLALEESSLKYG 497
Cdd:COG5022 736 LEDMRDAKLDNIATR------------IQRAIRGRYLRR-------RYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLF 796
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 498 ELEKENQQLSKK----------IEKLQTQLEREKQSNQDLE------------TLSEELIREKEQLQSGMEALKADRARQ 555
Cdd:COG5022 797 IKLQPLLSLLGSrkeyrsylacIIKLQKTIKREKKLRETEEvefslkaevliqKFGRSLKAKKRFSLLKKETIYLQSAQR 876
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 556 IKDLEQEKGHLHQAVWSLRERPQVNStkdvEKENRALHQAVTEAGSKLSQLELeKQQLHRDLEEAKEKGEQAEALEKELH 635
Cdd:COG5022 877 VELAERQLQELKIDVKSISSLKLVNL----ELESEIIELKKSLSSDLIENLEF-KTELIARLKKLLNNIDLEEGPSIEYV 951
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 636 RLEKENEQLTKEvTSLKAATEKVEAL-----EHQSQGLElENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELrkmv 710
Cdd:COG5022 952 KLPELNKLHEVE-SKLKETSEEYEDLlkkstILVREGNK-ANSELKNFKKELAELSKQYGALQESTKQLKELPVEV---- 1025
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 711 eamrftsakmAQIETENRQLEREKEELRRdvelLKTLSKKSERLELSYQSVSAENLQLQhslessthksqaLQRELSQLE 790
Cdd:COG5022 1026 ----------AELQSASKIISSESTELSI----LKPLQKLKGLLLLENNQLQARYKALK------------LRRENSLLD 1079
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 791 AERQALRRDLETLqlthkqlegaeedrkALEQEVAQLEKDKKLLEKEARrlwqqvelKDAILDDSAAKLSAAEKESRALD 870
Cdd:COG5022 1080 DKQLYQLESTENL---------------LKTINVKDLEVTNRNLVKPAN--------VLQFIVAQMIKLNLLQEISKFLS 1136
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 871 KELARCRDVGSKLKELEKDnRDLTKQVTMHTRTLTTLREDLVLEK---------LKSQQLSSELDKLSQELEKV------ 935
Cdd:COG5022 1137 QLVNTLEPVFQKLSVLQLE-LDGLFWEANLEALPSPPPFAALSEKrlyqsalydEKSKLSSSEVNDLKNELIALfskifs 1215
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 936 GLSKDLLLQeddgHGDGKGKTESALKTTL-AMKEEKIVFLEAQVEEKESLSRQLqielqmikKEHEQLRQTQEGGDKAQN 1014
Cdd:COG5022 1216 GWPRGDKLK----KLISEGWVPTEYSTSLkGFNNLNKKFDTPASMSNEKLLSLL--------NSIDNLLSSYKLEEEVLP 1283
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1015 ALKR---PPGKVTSHQEKEAWEPSHKeatMELLRVKDRAIELErSNAALQAERQLLKEQLQHLEtqnvsfsSQILTLQKQ 1091
Cdd:COG5022 1284 ATINsllQYINVGLFNALRTKASSLR---WKSATEVNYNSEEL-DDWCREFEISDVDEELEELI-------QAVKVLQLL 1352
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1092 SAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAKEAEheglqQQQEQLAAVYEALLQDHKHLgtlyEC 1171
Cdd:COG5022 1353 KDDLNKLDELLDACYSLNPAEIQNLKSRYDPADKENNLPKEILKKIEAL-----LIKQELQLSLEGKDETEVHL----SE 1423
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 47059089 1172 QSSEYEALIRqhsclktLHRNLELEHKELGERHGDLQQRKAELEE 1216
Cdd:COG5022 1424 IFSEEKSLIS-------LDRNSIYKEEVLSSLSALLTKEKIALLD 1461
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
745-1383 |
1.07e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 57.29 E-value: 1.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 745 KTLSKKSERLELSYQSVSaenLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEV 824
Cdd:TIGR00618 190 KSLHGKAELLTLRSQLLT---LCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLR 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 825 AQLEkdkkllekEARRLWQQVELKDAILDDSAAKLSAAEKEsraldKELARCR-DVGSKLKELEKDNRDLTKQVtMHTRT 903
Cdd:TIGR00618 267 ARIE--------ELRAQEAVLEETQERINRARKAAPLAAHI-----KAVTQIEqQAQRIHTELQSKMRSRAKLL-MKRAA 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 904 LTTLREDLVLEKLKSQQLSSELDKLSQELEKVGLSKDLLLQEddghgdgkgktesalkttLAMKEEkivfLEAQVEEKES 983
Cdd:TIGR00618 333 HVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQ------------------HTLTQH----IHTLQQQKTT 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 984 LSRQLQIELQMIKKEHEqLRQTQEGGDKAQNALKRPpgKVTSHQEKEawePSHKEATMELLRVKDRAIELERSNAALQAE 1063
Cdd:TIGR00618 391 LTQKLQSLCKELDILQR-EQATIDTRTSAFRDLQGQ--LAHAKKQQE---LQQRYAELCAAAITCTAQCEKLEKIHLQES 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1064 RQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHtttlqtQTAKLQVENSTLS-SQNAALSAQYTVLQSQQAAKEAEHE 1142
Cdd:TIGR00618 465 AQSLKEREQQLQTKEQIHLQETRKKAVVLARLLEL------QEEPCPLCGSCIHpNPARQDIDNPGPLTRRMQRGEQTYA 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1143 GLQQQqeqLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRNLELEHKELGerhgDLQQRKAELEELEKVLS 1222
Cdd:TIGR00618 539 QLETS---EEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITV----RLQDLTEKLSEAEDMLA 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1223 TEREALEREQKTNAiatsENQRLRGELDRISFLHQQLK---GEYEELHAHTKELKTSLNNSQLELSRWQVRFDELKEQhQ 1299
Cdd:TIGR00618 612 CEQHALLRKLQPEQ----DLQDVRLHLQQCSQELALKLtalHALQLTLTQERVREHALSIRVLPKELLASRQLALQKM-Q 686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1300 SMDISLT---KMDNHCELLSRLKGNLEEENHHLLSQIQLLSQQNQMLLEQNMESKEQYHEE-QKQYIDKLNALRR-HKEK 1374
Cdd:TIGR00618 687 SEKEQLTywkEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKElMHQARTVLKARTEaHFNN 766
|
....*....
gi 47059089 1375 LEEKIMDQY 1383
Cdd:TIGR00618 767 NEEVTAALQ 775
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
922-1379 |
1.11e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 57.29 E-value: 1.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 922 SSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMK---EEKIVFLEAQVEEKESLSRQLQIELQMIKKE 998
Cdd:TIGR00618 162 SKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTlctPCMPDTYHERKQVLEKELKHLREALQQTQQS 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 999 HEQLRQTQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHKEATMELLRVKDRAIELERSNAALQAERQLlkeqlqhletqn 1078
Cdd:TIGR00618 242 HAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQA------------ 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1079 vsfssqiltlqkqsaflQEHTTTLQTQTAKLqvenstlssqnAALSAQYTVLQSQQAAKEAEHEGLqqqqeqlaavyEAL 1158
Cdd:TIGR00618 310 -----------------QRIHTELQSKMRSR-----------AKLLMKRAAHVKQQSSIEEQRRLL-----------QTL 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1159 LQDHKHLGtlyecQSSEYEALIRQHSClktlhrnlelEHKELGERHGDLQQRKAELEELEKVLSTEREALEREQKTNAIA 1238
Cdd:TIGR00618 351 HSQEIHIR-----DAHEVATSIREISC----------QQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTR 415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1239 TSENQRLRGELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSRWQVRFDELKEQHQSMDISLTKMDN----HCEL 1314
Cdd:TIGR00618 416 TSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRkkavVLAR 495
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1315 LSRLKGN---LEEENHHLLSQIQLL--SQQNQMLLEQNMESKEQYHEEQKQYIDKLNALRRHKEKLEEKI 1379
Cdd:TIGR00618 496 LLELQEEpcpLCGSCIHPNPARQDIdnPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQM 565
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
719-897 |
1.30e-07 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 54.55 E-value: 1.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 719 KMAQIETENRQLEREKEELRRDVELLKtlskksERLElsyqsvsaenlQLQHSLESSTHKSQALQRELSQLEAERQALRR 798
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELE------DELA-----------ALEARLEAAKTELEDLEKEIKRLELEIEEVEA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 799 DLETLQlthKQLEGA--EEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKEL-AR 875
Cdd:COG1579 74 RIKKYE---EQLGNVrnNKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELdEE 150
|
170 180
....*....|....*....|..
gi 47059089 876 CRDVGSKLKELEKDNRDLTKQV 897
Cdd:COG1579 151 LAELEAELEELEAEREELAAKI 172
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
791-1233 |
2.19e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.93 E-value: 2.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 791 AERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAIlddsaAKLSAAEKESRALD 870
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLY-----QELEALEAELAELP 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 871 KELARCRDVGSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKS-QQLSSELDKLSQELEkvglskdlllqeddgh 949
Cdd:COG4717 146 ERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEELEELQQRLA---------------- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 950 gdgkgktesALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQmIKKEHEQLRQT------QEGGDKAQNALKRPPGKV 1023
Cdd:COG4717 210 ---------ELEEELEEAQEELEELEEELEQLENELEAAALEER-LKEARLLLLIAaallalLGLGGSLLSLILTIAGVL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1024 TSHQEKEAWEPSHKEATMELLRVKDRAIELERSNAALQAERqlLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQ 1103
Cdd:COG4717 280 FLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEE--LEELLAALGLPPDLSPEELLELLDRIEELQELLREAE 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1104 TQTAKLQVENstLSSQNAALsaqytvLQSQQAAKEAEHEGLQQQQEQlaavYEALLQDHKHLGTLYECQSSEYEALIRQH 1183
Cdd:COG4717 358 ELEEELQLEE--LEQEIAAL------LAEAGVEDEEELRAALEQAEE----YQELKEELEELEEQLEELLGELEELLEAL 425
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 47059089 1184 SC--LKTLHRNLELEHKELGERHGDLQQRKAELEELEKVLSTEREALEREQK 1233
Cdd:COG4717 426 DEeeLEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQE 477
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
743-1204 |
2.40e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.93 E-value: 2.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 743 LLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQ 822
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELE---AELEELREELEKLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 823 EVAQLEKDKKLLEKEARRLWQQVELKDaiLDDSAAKLSAAEKESRALDKELARCRDVGSKLKEL-----EKDNRDLTKQV 897
Cdd:COG4717 124 LLQLLPLYQELEALEAELAELPERLEE--LEERLEELRELEEELEELEAELAELQEELEELLEQlslatEEELQDLAEEL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 898 TMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEKVGLSKDL---------------LLQEDDGHGDGKGKTESALKT 962
Cdd:COG4717 202 EELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLkearlllliaaallaLLGLGGSLLSLILTIAGVLFL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 963 TLAmkeekIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKrppgkvtshqekeawEPSHKEATME 1042
Cdd:COG4717 282 VLG-----LLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLP---------------PDLSPEELLE 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1043 LLRVKDRAIELERSNAALQAERQL---LKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQ 1119
Cdd:COG4717 342 LLDRIEELQELLREAEELEEELQLeelEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEEL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1120 NAA-----LSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHK--HLGTLYECQSSEYEALIRQHSCLKTLHRN 1192
Cdd:COG4717 422 LEAldeeeLEEELEELEEELEELEEELEELREELAELEAELEQLEEDGElaELLQELEELKAELRELAEEWAALKLALEL 501
|
490
....*....|..
gi 47059089 1193 LELEHKELGERH 1204
Cdd:COG4717 502 LEEAREEYREER 513
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1625-2001 |
3.14e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.10 E-value: 3.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1625 PPPRNGPVSQETiqKKGAASTHTGVRPHSASPSSEMVTLEEFLEESNRGGSPTHDTPScrddllsdyfrkahDPPAlggq 1704
Cdd:PHA03247 2569 PPPRPAPRPSEP--AVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAP--------------DPPP---- 2628
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1705 PGPPARKDGAKMPTSFVAPTIKMSINTSEGQQLKPGHYVKPNLRPSEAEALAGMPSRQVQPPQ--SL-SLGRPRQTTMTq 1781
Cdd:PHA03247 2629 PSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTvgSLtSLADPPPPPPT- 2707
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1782 nchmPVSRSASLSRAFSLASadllrasGPEACRPESPQKPGgheAAGARETSTHSLQGSHILARERTPIVGKADSPSPGQ 1861
Cdd:PHA03247 2708 ----PEPAPHALVSATPLPP-------GPAAARQASPALPA---APAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPA 2773
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1862 GTRGRPLDTrrfsLAPPKEERLAPLQQSATAPALATGCSSGSNPQIQHFSPTVAPAvrtkSKVPQHSGEVATVAPVRPG- 1940
Cdd:PHA03247 2774 APAAGPPRR----LTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPA----GPLPPPTSAQPTAPPPPPGp 2845
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47059089 1941 LGTSEGDGG---PGHGYSEGLLTKSPGRSSDLPPH----------VKRGPDDFSQGSSSKSTPASPEPGGDPQT 2001
Cdd:PHA03247 2846 PPPSLPLGGsvaPGGDVRRRPPSRSPAAKPAAPARppvrrlarpaVSRSTESFALPPDQPERPPQPQAPPPPQP 2919
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
607-1266 |
3.99e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.57 E-value: 3.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 607 ELEKQQLHRDLEEAKEKGEQAEaleKELHRLEKENEQLTKEVT----SLKAATEKVEALEHQSQGLELENRSLRkslDTL 682
Cdd:pfam01576 4 EEEMQAKEEELQKVKERQQKAE---SELKELEKKHQQLCEEKNalqeQLQAETELCAEAEEMRARLAARKQELE---EIL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 683 QNVSVQLEGLERDKQQLGQENlelRKMVEamrftsakmaQIETENRQLErEKEELRRDVELLK-TLSKKSERLELSYQSV 761
Cdd:pfam01576 78 HELESRLEEEEERSQQLQNEK---KKMQQ----------HIQDLEEQLD-EEEAARQKLQLEKvTTEAKIKKLEEDILLL 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 762 SAENLQLQHSlessthKSQALQR--ELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQ-LEKDKKLLEKEA 838
Cdd:pfam01576 144 EDQNSKLSKE------RKLLEERisEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQeLEKAKRKLEGES 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 839 RRLWQQVELKDAILDDSAAKLSAAEKESRALdkeLARCRDVGSKLKELEKDNRDLTKQvtmhtrtLTTLREDLVLEKLKS 918
Cdd:pfam01576 218 TDLQEQIAELQAQIAELRAQLAKKEEELQAA---LARLEEETAQKNNALKKIRELEAQ-------ISELQEDLESERAAR 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 919 QQLSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQmikKE 998
Cdd:pfam01576 288 NKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELT---EQ 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 999 HEQLRQTQEGGDKAQNALKRPPGKV-----TSHQEKEAWEPSHKEATMELLRVKDRAIELERSNA-------ALQAERQL 1066
Cdd:pfam01576 365 LEQAKRNKANLEKAKQALESENAELqaelrTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAelaeklsKLQSELES 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1067 LKEQLQHLETQNVSFSSQILTLQKQ----SAFLQEHTT---TLQTQTAKLQVENSTLSSQ-------NAALSAQYTVLQS 1132
Cdd:pfam01576 445 VSSLLNEAEGKNIKLSKDVSSLESQlqdtQELLQEETRqklNLSTRLRQLEDERNSLQEQleeeeeaKRNVERQLSTLQA 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1133 QQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKA 1212
Cdd:pfam01576 525 QLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQK 604
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47059089 1213 ELEEL---EKVLSTER-------EALEREQKTNAIATS----ENQRLRGELDRIsflHQQLKGEYEEL 1266
Cdd:pfam01576 605 KFDQMlaeEKAISARYaeerdraEAEAREKETRALSLAraleEALEAKEELERT---NKQLRAEMEDL 669
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1441-1999 |
4.47e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.71 E-value: 4.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1441 ALRSQTENPDNPPSGPNcveerdthngpvGKGPGDlkpKRGSPRGGSVDRTDTSTDPAVKSWPSEPGSRTFSTSATTAAL 1520
Cdd:PHA03247 2581 AVTSRARRPDAPPQSAR------------PRAPVD---DRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPT 2645
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1521 S------SSTPIPKHLGRTKGCNSDDNLCEPSSEPDGPyhRQQASRP------NSLESSRNASSNSSPLSLKGSSDHLHS 1588
Cdd:PHA03247 2646 VppperpRDDPAPGRVSRPRRARRLGRAAQASSPPQRP--RRRAARPtvgsltSLADPPPPPPTPEPAPHALVSATPLPP 2723
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1589 RCESFSSADLIPSRDPATlsrdgntsgrgllgrheyPPPRNGPVSQETIQKKGAASTHTGvrPHSASPSSEmvtleefle 1668
Cdd:PHA03247 2724 GPAAARQASPALPAAPAP------------------PAVPAGPATPGGPARPARPPTTAG--PPAPAPPAA--------- 2774
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1669 esnRGGSPTHDTPSCRDDLLSDYFRKAHDPPALGGQPGPPARKDGAKMPTSFVAPTIKMSINTSEGQQLKPGHYVKPNLr 1748
Cdd:PHA03247 2775 ---PAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSL- 2850
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1749 PSEAEALAGMPSRQVQPPqslslgRPRQTTMTQNCHMPVSRsaslsrafsLASADLLRASGPEACRPESPQKPGGHEAAG 1828
Cdd:PHA03247 2851 PLGGSVAPGGDVRRRPPS------RSPAAKPAAPARPPVRR---------LARPAVSRSTESFALPPDQPERPPQPQAPP 2915
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1829 ARETsthslqgshilarerTPIVGKADSPSPGQGTRGRPldtrrfslAPPkeerLAPLQQSATAPALATGCSsgsNPQIQ 1908
Cdd:PHA03247 2916 PPQP---------------QPQPPPPPQPQPPPPPPPRP--------QPP----LAPTTDPAGAGEPSGAVP---QPWLG 2965
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1909 HFSPTVAPAVRTKSKVPQHSGEV-ATVAPVRPGLGTS-------------EGDGGPGhGYSEGLLTKSPGRSSDLPPHVK 1974
Cdd:PHA03247 2966 ALVPGRVAVPRFRVPQPAPSREApASSTPPLTGHSLSrvsswasslalheETDPPPV-SLKQTLWPPDDTEDSDADSLFD 3044
|
570 580
....*....|....*....|....*
gi 47059089 1975 RGPDDFSQGSSSKSTPASPEPGGDP 1999
Cdd:PHA03247 3045 SDSERSDLEALDPLPPEPHDPFAHE 3069
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
270-1138 |
5.22e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.44 E-value: 5.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 270 LEEKTEQLADT-----RHEVDQLVLELQKAKQD----NIQLAADARSARAYRDELDSLREKANRV-----ERLEMDLVRC 335
Cdd:TIGR01612 727 IENKKNELLDIiveikKHIHGEINKDLNKILEDfknkEKELSNKINDYAKEKDELNKYKSKISEIknhynDQINIDNIKD 806
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 336 KEKLHDVDFYKARME--ELREDNI--ILIETKAMLEEQLTasraRSDKVHELE---KENL------------QLKSKLHD 396
Cdd:TIGR01612 807 EDAKQNYDKSKEYIKtiSIKEDEIfkIINEMKFMKDDFLN----KVDKFINFEnncKEKIdseheqfaeltnKIKAEISD 882
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 397 LELDRDADK------------KQIE---------KLLEEYMVLEMAQKQSMKESAHLGWEL-EQLSKNADL---SDASRK 451
Cdd:TIGR01612 883 DKLNDYEKKfndskslineinKSIEeeyqnintlKKVDEYIKICENTKESIEKFHNKQNILkEILNKNIDTikeSNLIEK 962
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 452 SFVFELNECASSRILKLEKenqslqstiqglrdtslALEESSLKygELEKENQQLSKKIEKLQTQLEREKQSnqdleTLS 531
Cdd:TIGR01612 963 SYKDKFDNTLIDKINELDK-----------------AFKDASLN--DYEAKNNELIKYFNDLKANLGKNKEN-----MLY 1018
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 532 EELiREKEQLQSGMEALKADRARQIKDLEQEkghLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLElEKQ 611
Cdd:TIGR01612 1019 HQF-DEKEKATNDIEQKIEDANKNIPNIEIA---IHTSIYNIIDEIEKEIGKNIELLNKEILEEAEINITNFNEIK-EKL 1093
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 612 QLHRDLEEAKEKG-EQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEAL--EHQSQGLELENRSLRksldTLQNVSVq 688
Cdd:TIGR01612 1094 KHYNFDDFGKEENiKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYidEIKAQINDLEDVADK----AISNDDP- 1168
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 689 lEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTL--SKKSERLELSYQSVSAENL 766
Cdd:TIGR01612 1169 -EEIEKKIENIVTKIDKKKNIYDEIKKLLNEIAEIEKDKTSLEEVKGINLSYGKNLGKLflEKIDEEKKKSEHMIKAMEA 1247
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 767 QLQhSLESSTHKSQALQRELsqleAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQL-EKDKKLLEKEARrlwqQV 845
Cdd:TIGR01612 1248 YIE-DLDEIKEKSPEIENEM----GIEMDIKAEMETFNISHDDDKDHHIISKKHDENISDIrEKSLKIIEDFSE----ES 1318
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 846 ELKDaILDDSAAKLSAAEKESRALDKELARCRDVGSKLK----------------ELEKDNRDLTKQVTMHTRTLTTLRE 909
Cdd:TIGR01612 1319 DIND-IKKELQKNLLDAQKHNSDINLYLNEIANIYNILKlnkikkiidevkeytkEIEENNKNIKDELDKSEKLIKKIKD 1397
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 910 DLVLEKLKSQQLSSELDK-LSQELEKVGLSKDLLLQE----------------------------------------DDG 948
Cdd:TIGR01612 1398 DINLEECKSKIESTLDDKdIDECIKKIKELKNHILSEesnidtyfknadennenvlllfkniemadnksqhilkikkDNA 1477
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 949 HGD--------------GKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQmikkehEQLRQTQEGGDKAQN 1014
Cdd:TIGR01612 1478 TNDhdfninelkehidkSKGCKDEADKNAKAIEKNKELFEQYKKDVTELLNKYSALAIK------NKFAKTKKDSEIIIK 1551
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1015 ALKRPPGKVTSHQEKEawEPSHKEATMELLRVKDRAIELERSNAALQAerqlLKEQLQHLETQNVsfssQILTLQKQSAF 1094
Cdd:TIGR01612 1552 EIKDAHKKFILEAEKS--EQKIKEIKKEKFRIEDDAAKNDKSNKAAID----IQLSLENFENKFL----KISDIKKKIND 1621
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*.
gi 47059089 1095 LQEHTTTLQTQTAKLQV--ENSTLSSQNAALSAQYTVLQSQQAAKE 1138
Cdd:TIGR01612 1622 CLKETESIEKKISSFSIdsQDTELKENGDNLNSLQEFLESLKDQKK 1667
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
775-934 |
6.49e-07 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 52.62 E-value: 6.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 775 STHKSQALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDD 854
Cdd:COG1579 1 AMPEDLRALLDLQELDSELDRLEHRLKELP---AELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKK 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 855 SAAKLSAA--EKESRALDKELARCRDvgsKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQEL 932
Cdd:COG1579 78 YEEQLGNVrnNKEYEALQKEIESLKR---RISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAEL 154
|
..
gi 47059089 933 EK 934
Cdd:COG1579 155 EA 156
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
465-713 |
7.37e-07 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 54.47 E-value: 7.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 465 ILKLEKENQSLQSTIQGLRD--TSLALEESSLK--YGELEKENQQLSKKIEKLQTQLEREKQSNQDLEtlsEELIREKEQ 540
Cdd:pfam09726 404 IKKLKAELQASRQTEQELRSqiSSLTSLERSLKseLGQLRQENDLLQTKLHNAVSAKQKDKQTVQQLE---KRLKAEQEA 480
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 541 LQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERpqvnstkdvekenralhqavTEA-GSKLSQLELEKQQLHRDLEE 619
Cdd:pfam09726 481 RASAEKQLAEEKKRKKEEEATAARAVALAAASRGEC--------------------TESlKQRKRELESEIKKLTHDIKL 540
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 620 AKEKGEQAEALEKELHRLeKENEQLTKEVTS-LKAATEKVEALEHQsqgLELENRSLRKSLDTLQNVSVQLEGLERDKQQ 698
Cdd:pfam09726 541 KEEQIRELEIKVQELRKY-KESEKDTEVLMSaLSAMQDKNQHLENS---LSAETRIKLDLFSALGDAKRQLEIAQGQIYQ 616
|
250
....*....|....*.
gi 47059089 699 LGQENLELR-KMVEAM 713
Cdd:pfam09726 617 KDQEIKDLKqKIAEVM 632
|
|
| WEMBL |
pfam05701 |
Weak chloroplast movement under blue light; WEMBL consists of several plant proteins required ... |
593-932 |
9.49e-07 |
|
Weak chloroplast movement under blue light; WEMBL consists of several plant proteins required for the chloroplast avoidance response under high intensity blue light. This avoidance response consists in the relocation of chloroplasts on the anticlinal side of exposed cells. Acts in association with PMI2 to maintain the velocity of chloroplast photo-relocation movement via the regulation of cp-actin filaments. Thus several member-sequences are described as "myosin heavy chain-like".
Pssm-ID: 461718 [Multi-domain] Cd Length: 562 Bit Score: 53.88 E-value: 9.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 593 HQAVTEAGSKLSQLELEKQQlhrdlEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQglelen 672
Cdd:pfam05701 29 HRIQTVERRKLVELELEKVQ-----EEIPEYKKQSEAAEAAKAQVLEELESTKRLIEELKLNLERAQTEEAQAK------ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 673 rslrksldtlqnvsvqleglerdkqqlgqENLELRKM-VEAMRFTSAKMAQIETENrQLEREKEELRRDVELLKTLSKKS 751
Cdd:pfam05701 98 -----------------------------QDSELAKLrVEEMEQGIADEASVAAKA-QLEVAKARHAAAVAELKSVKEEL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 752 ERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQlegAEEDR----KALEQEVAQL 827
Cdd:pfam05701 148 ESLRKEYASLVSERDIAIKRAEEAVSASKEIEKTVEELTIELIATKESLESAHAAHLE---AEEHRigaaLAREQDKLNW 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 828 EKDKKLLEKEARRLWQQVELKdailDDSAAKLSAAEKESRALDKELARCrdVGSKLKELEKDNRDLTKQVTMHTRTLTTL 907
Cdd:pfam05701 225 EKELKQAEEELQRLNQQLLSA----KDLKSKLETASALLLDLKAELAAY--MESKLKEEADGEGNEKKTSTSIQAALASA 298
|
330 340 350
....*....|....*....|....*....|....*....
gi 47059089 908 REDLV-----LEKLKSQ---------QLSSELDKLSQEL 932
Cdd:pfam05701 299 KKELEevkanIEKAKDEvnclrvaaaSLRSELEKEKAEL 337
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
474-932 |
9.69e-07 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 54.04 E-value: 9.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 474 SLQSTIQGLRDTSLALEESslkYGELEKENQQLSKKIEKLQTQLErekQSNQDLEtLSEELIREKEQLQSGMEALKADRA 553
Cdd:PRK10246 416 AQHAEQRPLRQRLVALHGQ---IVPQQKRLAQLQVAIQNVTQEQT---QRNAALN-EMRQRYKEKTQQLADVKTICEQEA 488
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 554 RqIKDLEQEKGHL-------------HQAVWSLRE-RPQVNSTK--DVEKENRALHqavTEAGSKLSQLELEKQQLHRDL 617
Cdd:PRK10246 489 R-IKDLEAQRAQLqagqpcplcgstsHPAVEAYQAlEPGVNQSRldALEKEVKKLG---EEGAALRGQLDALTKQLQRDE 564
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 618 EEAKekgeqaealekelhRLEKENEQLTKEVTSLKAAtekvealehqsqglelenrsLRKSLDTLQNVSVQLEGLERDKQ 697
Cdd:PRK10246 565 SEAQ--------------SLRQEEQALTQQWQAVCAS--------------------LNITLQPQDDIQPWLDAQEEHER 610
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 698 QLGQenLELRKMVEAMrfTSAKMAQIETENRQLEREKEELRRDVellktlskksERLELSYQSVSAENLQLqHSLESSTH 777
Cdd:PRK10246 611 QLRL--LSQRHELQGQ--IAAHNQQIIQYQQQIEQRQQQLLTAL----------AGYALTLPQEDEEASWL-ATRQQEAQ 675
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 778 KSQALQRELSQLEAERQALRRDLETLQLTHkqlEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAA 857
Cdd:PRK10246 676 SWQQRQNELTALQNRIQQLTPLLETLPQSD---DLPHSEETVALDNWRQVHEQCLSLHSQLQTLQQQDVLEAQRLQKAQA 752
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 858 KLSAAEKESRALDKE--LARCRDVGSkLKELEKDNRDLTKQ-------VTMHTRTLT---TLREDLVLEKLKSQQLSSEL 925
Cdd:PRK10246 753 QFDTALQASVFDDQQafLAALLDEET-LTQLEQLKQNLENQrqqaqtlVTQTAQALAqhqQHRPDGLDLTVTVEQIQQEL 831
|
....*..
gi 47059089 926 DKLSQEL 932
Cdd:PRK10246 832 AQLAQQL 838
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
532-878 |
9.97e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.15 E-value: 9.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 532 EELIREKEQLQSGMEALKA--DRARQIKDLEQEKGHLHQAVWSLRERPQvnSTKDVEKENRALHQ---AVTEAGSKLSQL 606
Cdd:COG4913 613 AALEAELAELEEELAEAEErlEALEAELDALQERREALQRLAEYSWDEI--DVASAEREIAELEAeleRLDASSDDLAAL 690
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 607 ELEKQQLHRDLEEAKEkgeQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQN-V 685
Cdd:COG4913 691 EEQLEELEAELEELEE---ELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVEReL 767
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 686 SVQLEGlERDKQQLGQENLElRKMVEAMRftsakmaqieTENRQLEREKEELRRDVELLKTLSKKSERLElsyqsvsAEN 765
Cdd:COG4913 768 RENLEE-RIDALRARLNRAE-EELERAMR----------AFNREWPAETADLDADLESLPEYLALLDRLE-------EDG 828
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 766 L-----QLQHSLESSTHksQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRkaleqevAQLEKDKKLLEkEARR 840
Cdd:COG4913 829 LpeyeeRFKELLNENSI--EFVADLLSKLRRAIREIKERIDPLNDSLKRIPFGPGRY-------LRLEARPRPDP-EVRE 898
|
330 340 350
....*....|....*....|....*....|....*...
gi 47059089 841 LWQqvELKDAILDDSAAKLSAAEKESRALDKELARCRD 878
Cdd:COG4913 899 FRQ--ELRAVTSGASLFDEELSEARFAALKRLIERLRS 934
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
248-659 |
1.20e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.62 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 248 DKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAYRDE--LDSLREKANRV 325
Cdd:COG4717 122 EKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLatEEELQDLAEEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 326 ERLEMDLVRCKEKLHDVdfyKARMEELREDniilietkamlEEQLTASRARSDKVHELEKENLQLK--SKLHDLELDRDA 403
Cdd:COG4717 202 EELQQRLAELEEELEEA---QEELEELEEE-----------LEQLENELEAAALEERLKEARLLLLiaAALLALLGLGGS 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 404 DKKQIEKLLEEYMVLemaqkqsmkeSAHLGWELEQLSKNADLSDASRKsfvfELNECASSRILklekENQSLQSTIQGLR 483
Cdd:COG4717 268 LLSLILTIAGVLFLV----------LGLLALLFLLLAREKASLGKEAE----ELQALPALEEL----EEEELEELLAALG 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 484 DTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSgmealKADRARQIKDLEQE- 562
Cdd:COG4717 330 LPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRA-----ALEQAEEYQELKEEl 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 563 ---KGHLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAkEKGEQAEALEKELHRLEK 639
Cdd:COG4717 405 eelEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQL-EEDGELAELLQELEELKA 483
|
410 420
....*....|....*....|
gi 47059089 640 ENEQLTKEVTSLKAATEKVE 659
Cdd:COG4717 484 ELRELAEEWAALKLALELLE 503
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
315-760 |
1.20e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.62 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 315 LDSLREKANRVERLEMDLVRCKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLtasrarsdKVHELEKENLQLKSKL 394
Cdd:COG4717 70 LKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLL--------QLLPLYQELEALEAEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 395 HDLEldrdadkKQIEKLLEEYMVLEMAQKQsmkeSAHLGWELEQLSknadlsdasrksfvfelNECASSRILKLEKENQS 474
Cdd:COG4717 142 AELP-------ERLEELEERLEELRELEEE----LEELEAELAELQ-----------------EELEELLEQLSLATEEE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 475 LQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLS----------------------- 531
Cdd:COG4717 194 LQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLllliaaallallglggsllslil 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 532 ---------------EELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKDVEKENRALHQAV 596
Cdd:COG4717 274 tiagvlflvlgllalLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 597 TEAGSKLSQLELEKQQLHR----------DLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKV--EALEHQ 664
Cdd:COG4717 354 REAEELEEELQLEELEQEIaallaeagveDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdeEELEEE 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 665 SQGLELENRSLRKSLDTLQnvsvqleglerdkQQLGQENLELRKMVEAMRFtSAKMAQIETENRQLEREKEELRRDVELL 744
Cdd:COG4717 434 LEELEEELEELEEELEELR-------------EELAELEAELEQLEEDGEL-AELLQELEELKAELRELAEEWAALKLAL 499
|
490
....*....|....*.
gi 47059089 745 KTLSKKSERLELSYQS 760
Cdd:COG4717 500 ELLEEAREEYREERLP 515
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
715-934 |
1.21e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 715 FTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQ 794
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 795 ALRRDLETLQ------LTHKQLEGAEEDRKAL--EQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKES 866
Cdd:COG4942 94 ELRAELEAQKeelaelLRALYRLGRQPPLALLlsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47059089 867 RALDKELARcrdVGSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEK 934
Cdd:COG4942 174 AELEALLAE---LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
386-712 |
1.23e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 53.59 E-value: 1.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 386 ENLQLKSKLHDLELDRDADKKQIEKLLEEymvleMAQKQSMKESAHLGWELEQLSKNADLSDASRKSFVFELNECASSRI 465
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKFEK-----MEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQER 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 466 LKLEKENQ-------SLQSTIQGLRDTSLALEESSLKygELEKENQQLSKKIEKLQTQLE---------REKQSNQDLET 529
Cdd:pfam17380 342 MAMERERElerirqeERKRELERIRQEEIAMEISRMR--ELERLQMERQQKNERVRQELEaarkvkileEERQRKIQQQK 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 530 LSEELIR--EKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEagsklsqlE 607
Cdd:pfam17380 420 VEMEQIRaeQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAE--------E 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 608 LEKQQLHRDLEEAKEKgeqaeALEKELHR--LEKENEQltkEVTSLKAATEKVEALEHQSQGLELENR-SLRKSLDTLQN 684
Cdd:pfam17380 492 QRRKILEKELEERKQA-----MIEEERKRklLEKEMEE---RQKAIYEEERRREAEEERRKQQEMEERrRIQEQMRKATE 563
|
330 340 350
....*....|....*....|....*....|
gi 47059089 685 VSVQLEGLERDKQQLGQ--ENLELRKMVEA 712
Cdd:pfam17380 564 ERSRLEAMEREREMMRQivESEKARAEYEA 593
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
362-1018 |
1.27e-06 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 53.67 E-value: 1.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 362 TKAMLEEQLTASRARSDKvheLEKENLQLKSKLHDLELDRDADKKQIEKLLEEYM-VLEMAQKQSmkesahlgweleqLS 440
Cdd:pfam10174 110 TPELTEENFRRLQSEHER---QAKELFLLRKTLEEMELRIETQKQTLGARDESIKkLLEMLQSKG-------------LP 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 441 KNADLSDASRKSfvfelnecassRILKLEKENQSLQSTIQGLRDTSLALEEsslkygELEKENQ--QLSKKIEKLQTQLE 518
Cdd:pfam10174 174 KKSGEEDWERTR-----------RIAEAEMQLGHLEVLLDQKEKENIHLRE------ELHRRNQlqPDPAKTKALQTVIE 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 519 REKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKdvEKENRALHqavte 598
Cdd:pfam10174 237 MKDTKISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKK--ESELLALQ----- 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 599 agSKLSQLELEKQQLHRDLEEAKE----KGEQAEALEKELH----RLEKENEQLTKEVTSLKAATEK----VEALEHQSQ 666
Cdd:pfam10174 310 --TKLETLTNQNSDCKQHIEVLKEsltaKEQRAAILQTEVDalrlRLEEKESFLNKKTKQLQDLTEEkstlAGEIRDLKD 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 667 GLELENRS---LRKSLDTLQNV----SVQLEGLERDKQQLGQE----NLELRKMVEAM----RFTSAKMAQIETENRQLE 731
Cdd:pfam10174 388 MLDVKERKinvLQKKIENLQEQlrdkDKQLAGLKERVKSLQTDssntDTALTTLEEALsekeRIIERLKEQREREDRERL 467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 732 REKEELRRDVELLK-TLSkkSERLELSYQSVSAENLQLQ-HSLESSTHKSQAlqrELSQLEAERQALRRDLETLQLTHKQ 809
Cdd:pfam10174 468 EELESLKKENKDLKeKVS--ALQPELTEKESSLIDLKEHaSSLASSGLKKDS---KLKSLEIAVEQKKEECSKLENQLKK 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 810 LEGAEEDRKALEQ---EVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELARcrdvgsKLKEL 886
Cdd:pfam10174 543 AHNAEEAVRTNPEindRIRLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELESLTLR------QMKEQ 616
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 887 EKDNRDL-TKQVTMHTRTLTTLREDLVLE--------KLKSQQLSSELDKLSQELEKVGL---SKDLLLQEDDGH-GDGK 953
Cdd:pfam10174 617 NKKVANIkHGQQEMKKKGAQLLEEARRREdnladnsqQLQLEELMGALEKTRQELDATKArlsSTQQSLAEKDGHlTNLR 696
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47059089 954 GKTESALKTTLAMKEEKivfLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKR 1018
Cdd:pfam10174 697 AERRKQLEEILEMKQEA---LLAAISEKDANIALLELSSSKKKKTQEEVMALKREKDRLVHQLKQ 758
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
503-1074 |
1.33e-06 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 53.60 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 503 NQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSG---MEAL-KADRARQI----------------KDLEQE 562
Cdd:pfam07111 58 SQALSQQAELISRQLQELRRLEEEVRLLRETSLQQKMRLEAQameLDALaVAEKAGQAeaeglraalagaemvrKNLEEG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 563 KGHLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEkgeQAEALEKELHRLEKENE 642
Cdd:pfam07111 138 SQRELEEIQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLNSLETKRAGEAKQLAEAQK---EAELLRKQLSKTQEELE 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 643 QLTKEVTSLKAATEKVEALEHQSQGLELENRSLrksLDTLQNvsvqlegLERDKQQLgQENLELRKmVEAMRFTSAKMAQ 722
Cdd:pfam07111 215 AQVTLVESLRKYVGEQVPPEVHSQTWELERQEL---LDTMQH-------LQEDRADL-QATVELLQ-VRVQSLTHMLALQ 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 723 IETENRQLER----EKEELRRDVELLKTLSKKSERLELSYQSVSAEN-----------LQLQHSLESSTHKSQALQRELS 787
Cdd:pfam07111 283 EEELTRKIQPsdslEPEFPKKCRSLLNRWREKVFALMVQLKAQDLEHrdsvkqlrgqvAELQEQVTSQSQEQAILQRALQ 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 788 QLEAERQALRRDLETLQLthkQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKL-SAAEKES 866
Cdd:pfam07111 363 DKAAEVEVERMSAKGLQM---ELSRAQEARRRQQQQTASAEEQLKFVVNAMSSTQIWLETTMTRVEQAVARIpSLSNRLS 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 867 RALDK------------ELARCR---------------DVGSKLKELEKDNRDLTKQVTMHTRTLTT----LREDLVLEK 915
Cdd:pfam07111 440 YAVRKvhtikglmarkvALAQLRqescpppppappvdaDLSLELEQLREERNRLDAELQLSAHLIQQevgrAREQGEAER 519
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 916 LK----SQQLSSELDKLSQELEKVGLSKDLLLQEDdghgdgKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIE 991
Cdd:pfam07111 520 QQlsevAQQLEQELQRAQESLASVGQQLEVARQGQ------QESTEEAASLRQELTQQQEIYGQALQEKVAEVETRLREQ 593
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 992 LQMIKKEHEQLRQTQEggdKAQNALKRPPGKVTSHQEKEA-----WEPSHKEatmELLRVKDRAIELERSN----AALQA 1062
Cdd:pfam07111 594 LSDTKRRLNEARREQA---KAVVSLRQIQHRATQEKERNQelrrlQDEARKE---EGQRLARRVQELERDKnlmlATLQQ 667
|
650
....*....|..
gi 47059089 1063 ERQLLKEQLQHL 1074
Cdd:pfam07111 668 EGLLSRYKQQRL 679
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
611-874 |
1.46e-06 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 53.16 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 611 QQLHRDLEEAKEKGEQAEA----LEKELHRLEK------ENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLrksLD 680
Cdd:COG0497 168 RALKKELEELRADEAERAReldlLRFQLEELEAaalqpgEEEELEEERRRLSNAEKLREALQEALEALSGGEGGA---LD 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 681 TLQNVSVQLEGLERDKQQLGqenlELRKMVEAmrftsakmAQIETE--NRQLEREKEELRRDVELLktlskksERLElsy 758
Cdd:COG0497 245 LLGQALRALERLAEYDPSLA----ELAERLES--------ALIELEeaASELRRYLDSLEFDPERL-------EEVE--- 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 759 qsvsaENLQLQHSLessthkSQALQRELSQLEAERQALRRDLEtlqlthkQLEGAEEDRKALEQEVAQLEKDkklLEKEA 838
Cdd:COG0497 303 -----ERLALLRRL------ARKYGVTVEELLAYAEELRAELA-------ELENSDERLEELEAELAEAEAE---LLEAA 361
|
250 260 270
....*....|....*....|....*....|....*.
gi 47059089 839 RRLwqqvelkdailddSAAKLSAAEKESRALDKELA 874
Cdd:COG0497 362 EKL-------------SAARKKAAKKLEKAVTAELA 384
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
680-874 |
1.49e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 52.91 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 680 DTLQNVSVQLEGLERDKQQLGQEnleLRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKT-LSKKSERLE--L 756
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAE---LDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAeIEERREELGerA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 757 SYQSVSAENLQLQHSLESSTHKSQALQRelsqLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEK 836
Cdd:COG3883 93 RALYRSGGSVSYLDVLLGSESFSDFLDR----LSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEA 168
|
170 180 190
....*....|....*....|....*....|....*...
gi 47059089 837 EARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELA 874
Cdd:COG3883 169 AKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELA 206
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
608-1002 |
1.56e-06 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 53.52 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 608 LEKQQLHRDLEEAK-----EKGEQAEALEKELHRLE--KENEQ--------------LTKEVTS-LKAATEKVEALEHQS 665
Cdd:PRK10929 23 PDEKQITQELEQAKaaktpAQAEIVEALQSALNWLEerKGSLErakqyqqvidnfpkLSAELRQqLNNERDEPRSVPPNM 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 666 QGLELENRSLRksldtlqnVSVQLEGLERdkqQLGQENLELRKMVEAMrftsAKMAQIETENRQLEREKEelRRdvelLK 745
Cdd:PRK10929 103 STDALEQEILQ--------VSSQLLEKSR---QAQQEQDRAREISDSL----SQLPQQQTEARRQLNEIE--RR----LQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 746 TLSKKSERLElsyqsvSAENLQLQhsLESSTHKSQALQRELSQLEAE-RQALRR-DLETLQLTHKQLEGAEEDRK----A 819
Cdd:PRK10929 162 TLGTPNTPLA------QAQLTALQ--AESAALKALVDELELAQLSANnRQELARlRSELAKKRSQQLDAYLQALRnqlnS 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 820 LEQEVAQ--LEKDKKLLEKEArrlwqqvELKDAILDdsaaKLSAAEKESRALDKELARCRDVGSKlkelekdNRDLTKQV 897
Cdd:PRK10929 234 QRQREAEraLESTELLAEQSG-------DLPKSIVA----QFKINRELSQALNQQAQRMDLIASQ-------QRQAASQT 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 898 TMHTRTLTTLRE--------DLVLEKL-----------KSQQLSSELDKLSQE-------LEKvgLSKDLLLQEDDGhgd 951
Cdd:PRK10929 296 LQVRQALNTLREqsqwlgvsNALGEALraqvarlpempKPQQLDTEMAQLRVQrlryedlLNK--QPQLRQIRQADG--- 370
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 47059089 952 gkgktesalkTTLAMKEEKIvfLEAQVEEKESLSRQL------QI-ELQMIKKEHEQL 1002
Cdd:PRK10929 371 ----------QPLTAEQNRI--LDAQLRTQRELLNSLlsggdtLIlELTKLKVANSQL 416
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
498-843 |
1.63e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.42 E-value: 1.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 498 ELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSeelirekEQLQSGMEALkadraRQIKDLEQEKGHLHQAVWSLRERP 577
Cdd:PRK04863 301 QLAAEQYRLVEMARELAELNEAESDLEQDYQAAS-------DHLNLVQTAL-----RQQEKIERYQADLEELEERLEEQN 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 578 QVNSTKDVEK-ENRA-LHQAVTEAGSKLSQLELEKQQLhrDLEEAKekgeqAEALEKELHRLEKENEQLTKEVTSLKAAT 655
Cdd:PRK04863 369 EVVEEADEQQeENEArAEAAEEEVDELKSQLADYQQAL--DVQQTR-----AIQYQQAVQALERAKQLCGLPDLTADNAE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 656 EKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLE---------GLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETE 726
Cdd:PRK04863 442 DWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEqayqlvrkiAGEVSRSEAWDVARELLRRLREQRHLAEQLQQLRMR 521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 727 NRQLEREKEELRRDVELLKTLSKKSER-------LELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRR- 798
Cdd:PRK04863 522 LSELEQRLRQQQRAERLLAEFCKRLGKnlddedeLEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAAr 601
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47059089 799 --------------------DLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQ 843
Cdd:PRK04863 602 apawlaaqdalarlreqsgeEFEDSQDVTEYMQQLLERERELTVERDELAARKQALDEEIERLSQ 666
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1408-1883 |
1.73e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.64 E-value: 1.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1408 PKKEGSRERLKSTTDSPPWQLEPSdpaspSPSQALRSQTENPDNPPSGPNcveerdTHNGPVGKGPGdlkPKRGSPRGGS 1487
Cdd:PHA03307 72 PPGPGTEAPANESRSTPTWSLSTL-----APASPAREGSPTPPGPSSPDP------PPPTPPPASPP---PSPAPDLSEM 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1488 VDRTDTSTDPAVKSWPSEPGSRTFSTSATTAALSSSTPIPKhLGRTKGCnSDDNLCEPSSEPDGPYHRQQASRPNSless 1567
Cdd:PHA03307 138 LRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS-PEETARA-PSSPPAEPPPSTPPAAASPRPPRRSS---- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1568 rnassnssPLSLKGSSDhlhsrcesfSSADLIPSRDPATLSRDGNTS----GRGLLGRHEYPPPRNGPVSQETIQKKGAA 1643
Cdd:PHA03307 212 --------PISASASSP---------APAPGRSAADDAGASSSDSSSsessGCGWGPENECPLPRPAPITLPTRIWEASG 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1644 STHTGVRPHSASPSSEmvtleefleesnrggspthdtpscrddllsdyfrkahdPPALGGQPGPPARKDGAKMPTSfvap 1723
Cdd:PHA03307 275 WNGPSSRPGPASSSSS--------------------------------------PRERSPSPSPSSPGSGPAPSSP---- 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1724 tikmsintsegqqlkpghyvkpnlRPSEAEAlagmPSRQVQPPQSLSLGRPRQTtmtqnchMPVSRSASLSRAFSLASAD 1803
Cdd:PHA03307 313 ------------------------RASSSSS----SSRESSSSSTSSSSESSRG-------AAVSPGPSPSRSPSPSRPP 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1804 LLRASGPEACRPESPQKPGGHEAAGARETS--THSLQGSHILARERTPivgkadsPSPGQGTRGRPLDTRRFSLAPPKEE 1881
Cdd:PHA03307 358 PPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRARRRDATG-------RFPAGRPRPSPLDAGAASGAFYARY 430
|
..
gi 47059089 1882 RL 1883
Cdd:PHA03307 431 PL 432
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
507-836 |
1.77e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 53.10 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 507 SKKIEKLQTQLEREKQSNQDLETlseelirEKEQLQSGMEALKA-DRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKD- 584
Cdd:COG3206 63 PQSSDVLLSGLSSLSASDSPLET-------QIEILKSRPVLERVvDKLNLDEDPLGEEASREAAIERLRKNLTVEPVKGs 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 585 ------VEKENRALHQAVTEAgskLSQLELEkQQLHRDLEEAKEkgeQAEALEKELHRLEKENEQLTKEVTSLKAATeKV 658
Cdd:COG3206 136 nvieisYTSPDPELAAAVANA---LAEAYLE-QNLELRREEARK---ALEFLEEQLPELRKELEEAEAALEEFRQKN-GL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 659 EALEHQSQGLELENRSLRKSLDTLQnvsVQLEGLERDKQQLgQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELR 738
Cdd:COG3206 208 VDLSEEAKLLLQQLSELESQLAEAR---AELAEAEARLAAL-RAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELS 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 739 RdvellkTLSKKSERlelsYQSVSAENLQLQHSLEssthksQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRK 818
Cdd:COG3206 284 A------RYTPNHPD----VIALRAQIAALRAQLQ------QEAQRILASLEAELEALQAREASLQAQLAQLEARLAELP 347
|
330
....*....|....*...
gi 47059089 819 ALEQEVAQLEKDKKLLEK 836
Cdd:COG3206 348 ELEAELRRLEREVEVARE 365
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
677-846 |
1.89e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 51.08 E-value: 1.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 677 KSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRftsAKMAQIETENRQLEREKEELRRDVELLKTLSKKSErlEL 756
Cdd:COG1579 7 RALLDLQELDSELDRLEHRLKELPAELAELEDELAALE---ARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYE--EQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 757 SYQSVSAENLQ-LQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGA-EEDRKALEQEVAQLEKDKKLL 834
Cdd:COG1579 82 LGNVRNNKEYEaLQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAElEEKKAELDEELAELEAELEEL 161
|
170
....*....|..
gi 47059089 835 EKEARRLWQQVE 846
Cdd:COG1579 162 EAEREELAAKIP 173
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
265-1105 |
2.25e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 53.03 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 265 RVRQELEEKTEQLADTRHE----VDQLVLELQKAKQDNIQLAADARSARAYRDELDSLREKANRVerleMDLVRCKEKlh 340
Cdd:COG3096 275 RHANERRELSERALELRRElfgaRRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLV----QTALRQQEK-- 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 341 dVDFYKARMEELREDNIILIETKAMLEEQLTASRARsdkVHELEKENLQLKSKLHDLE-------------------LDR 401
Cdd:COG3096 349 -IERYQEDLEELTERLEEQEEVVEEAAEQLAEAEAR---LEAAEEEVDSLKSQLADYQqaldvqqtraiqyqqavqaLEK 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 402 --------DADKKQIEKLLEEYMVLEMAQKQSMKESAHlgweleQLSknadLSDASRKSF--VFELNECASSRILKLEKE 471
Cdd:COG3096 425 aralcglpDLTPENAEDYLAAFRAKEQQATEEVLELEQ------KLS----VADAARRQFekAYELVCKIAGEVERSQAW 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 472 NQSLQSTIQGLRDTSLALEESSL--KYGELEK---ENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGME 546
Cdd:COG3096 495 QTARELLRRYRSQQALAQRLQQLraQLAELEQrlrQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAA 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 547 ALKADRARqikdLEQEKGHLHQAVWSLRERP------QVNSTKDVEKENRALH--QAVTEAGSKLSQLELEKQQLHRDLE 618
Cdd:COG3096 575 EAVEQRSE----LRQQLEQLRARIKELAARApawlaaQDALERLREQSGEALAdsQEVTAAMQQLLEREREATVERDELA 650
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 619 EAKekgeqaEALEKELHRL---------------EKENEQLTKEV---TSLKAATEkVEALEHQS-QGLELENRSL-RKS 678
Cdd:COG3096 651 ARK------QALESQIERLsqpggaedprllalaERLGGVLLSEIyddVTLEDAPY-FSALYGPArHAIVVPDLSAvKEQ 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 679 LDTLQNVSVQLEGLERDKQQ-----LGQENLELRKMVE----AMRFT----------SAKMAQIETenrqLEREKEELrr 739
Cdd:COG3096 724 LAGLEDCPEDLYLIEGDPDSfddsvFDAEELEDAVVVKlsdrQWRYSrfpevplfgrAAREKRLEE----LRAERDEL-- 797
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 740 dVELLKTLSKKSERLELSYQSVSAenlqlqhslESSTHKSQALQrelSQLEAERQALRRDLETLQlthKQLEGAEEDRKA 819
Cdd:COG3096 798 -AEQYAKASFDVQKLQRLHQAFSQ---------FVGGHLAVAFA---PDPEAELAALRQRRSELE---RELAQHRAQEQQ 861
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 820 LEQEVAQLEKDKKLLekeaRRLWQQVELKDAilDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEkdnrdltkqvtm 899
Cdd:COG3096 862 LRQQLDQLKEQLQLL----NKLLPQANLLAD--ETLADRLEELREELDAAQEAQAFIQQHGKALAQLE------------ 923
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 900 htRTLTTLRED-LVLEKLKS--QQLSSELDKLSQELEkvGLSKDLLLQEDDGHGDgkgkTESALKTTLAMKEEkivfLEA 976
Cdd:COG3096 924 --PLVAVLQSDpEQFEQLQAdyLQAKEQQRRLKQQIF--ALSEVVQRRPHFSYED----AVGLLGENSDLNEK----LRA 991
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 977 QVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNAlkrppgKVTSHQEKEawepshKEatMELLRVKDRAIELERS 1056
Cdd:COG3096 992 RLEQAEEARREAREQLRQAQAQYSQYNQVLASLKSSRDA------KQQTLQELE------QE--LEELGVQADAEAEERA 1057
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*.
gi 47059089 1057 naalQAERQLLKEQLQH-------LETQNVSFSSQILTLQKQSAFLQEHTTTLQTQ 1105
Cdd:COG3096 1058 ----RIRRDELHEELSQnrsrrsqLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQ 1109
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
773-1384 |
2.27e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 52.80 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 773 ESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGA-EEDRKALEQEVAQLEKDKKLLEKEARRLWQQV-ELKDA 850
Cdd:pfam05483 67 DSDFENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKlQENRKIIEAQRKAIQELQFENEKVSLKLEEEIqENKDL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 851 ILDDSAAK-LSAAEKESraldkelarCRDVGSKLKELEKDnRDLTKQVTMHTRTlTTLREDLVLEKLKSQQLSSELD--- 926
Cdd:pfam05483 147 IKENNATRhLCNLLKET---------CARSAEKTKKYEYE-REETRQVYMDLNN-NIEKMILAFEELRVQAENARLEmhf 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 927 KLSQELEKVglskDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQielQMIKKEHEQLRQTQ 1006
Cdd:pfam05483 216 KLKEDHEKI----QHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLE---EKTKLQDENLKELI 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1007 EGGDKAQNALKRPPGKVT-SHQEKEAWEPSHKEATMELLRV-KDRAIELERSNAALQAE--------------RQLLKEQ 1070
Cdd:pfam05483 289 EKKDHLTKELEDIKMSLQrSMSTQKALEEDLQIATKTICQLtEEKEAQMEELNKAKAAHsfvvtefeattcslEELLRTE 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1071 LQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSaqytvlQSQQAAKEAEHegLQQQQEQ 1150
Cdd:pfam05483 369 QQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLD------EKKQFEKIAEE--LKGKEQE 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1151 LAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTlhrnlELEHKELGERHGDLQQRKAELEELEKVLSTEREALER 1230
Cdd:pfam05483 441 LIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKT-----ELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLEL 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1231 EQKTNAIATSENQRLRgELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELsrwqvrfDELKEQHQSMDISLTKMDN 1310
Cdd:pfam05483 516 KKHQEDIINCKKQEER-MLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKL-------DKSEENARSIEYEVLKKEK 587
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47059089 1311 HCELLSRLKGNLEEENHHLLSQIQLLSQQNQMLLEQNMESKEQYHEEQKQyIDKLN-ALRRHKEKLEEkIMDQYK 1384
Cdd:pfam05483 588 QMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIK-VNKLElELASAKQKFEE-IIDNYQ 660
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
255-625 |
2.48e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 2.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 255 ELADTKARLRRVRQELEEKTEQL--ADTRHEVDQLVLELQKAKQDNIQLAADARSARAYR--DELDSLREK-----ANRV 325
Cdd:PTZ00121 1493 EEAKKKADEAKKAAEAKKKADEAkkAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKkkaeeAKKA 1572
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 326 ERLEMDLVRCKEKLHDVDfyKARMEELREdniILIETKAMLEEQLTASRARSDKVHELEKENlQLKSKLHDLELDRDADK 405
Cdd:PTZ00121 1573 EEDKNMALRKAEEAKKAE--EARIEEVMK---LYEEEKKMKAEEAKKAEEAKIKAEELKKAE-EEKKKVEQLKKKEAEEK 1646
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 406 KQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADlsDASRKSFVFELNECASSRILKLEKENQSLQSTIQGLRDt 485
Cdd:PTZ00121 1647 KKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEE--DEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKK- 1723
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 486 slALEESSLKYGELEKENQQLSKKIEKLQTQLEREK---QSNQDLETLSEELIRE-----KEQLQSGMEALKADRARQIK 557
Cdd:PTZ00121 1724 --AEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKkiaHLKKEEEKKAEEIRKEkeaviEEELDEEDEKRRMEVDKKIK 1801
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 558 DLE------QEKGHLHQAVWSLRERPQVNSTK--------------DVEKENRALHQAVTEAGSKLSQLELEKQQLHRDL 617
Cdd:PTZ00121 1802 DIFdnfaniIEGGKEGNLVINDSKEMEDSAIKevadsknmqleeadAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDE 1881
|
....*...
gi 47059089 618 EEAKEKGE 625
Cdd:PTZ00121 1882 EEIEEADE 1889
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
382-623 |
2.71e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.72 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 382 ELEKENLQLKSKLHDLELDRDADKKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSFVFELNEcA 461
Cdd:TIGR04523 444 DLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISS-L 522
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 462 SSRILKLEKENQSLQSTIQGLRDTSLALEeSSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLEtlseELIREKEQl 541
Cdd:TIGR04523 523 KEKIEKLESEKKEKESKISDLEDELNKDD-FELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQ----ELIDQKEK- 596
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 542 qsgmealkadrarQIKDLEQEKGHLHQAVWSLRERpqvnsTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAK 621
Cdd:TIGR04523 597 -------------EKKDLIKEIEEKEKKISSLEKE-----LEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
..
gi 47059089 622 EK 623
Cdd:TIGR04523 659 NK 660
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
346-555 |
2.75e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 2.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 346 KARMEELREDNIILIETKAMLEEQLTASRAR----SDKVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEEYM-VLEM 420
Cdd:COG4942 33 QQEIAELEKELAALKKEEKALLKQLAALERRiaalARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAeLLRA 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 421 AQKQSMKEsahlgwELEQLSKNADLSDASRKSFVFE-LNECASSRILKLEKENQSLQSTIQGLRDTSLALEEsslKYGEL 499
Cdd:COG4942 113 LYRLGRQP------PLALLLSPEDFLDAVRRLQYLKyLAPARREQAEELRADLAELAALRAELEAERAELEA---LLAEL 183
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 47059089 500 EKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQ 555
Cdd:COG4942 184 EEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
511-933 |
3.14e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 52.65 E-value: 3.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 511 EKLQTQLEREKQSnqdLETLSEELIREKEQLQSGMEALK------------ADRARQIKDLEQEKGHLHQAVwslrerpq 578
Cdd:PRK04863 785 EKRIEQLRAEREE---LAERYATLSFDVQKLQRLHQAFSrfigshlavafeADPEAELRQLNRRRVELERAL-------- 853
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 579 vnstKDVEKENRALHQAVTEAGSKLSQLE--------LEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTS 650
Cdd:PRK04863 854 ----ADHESQEQQQRSQLEQAKEGLSALNrllprlnlLADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQLEPIVSV 929
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 651 LKAATEKVEALEHQSQGLELENRSLRKSLDTLQNV-----------SVQLEGLERD-----KQQLGQENLELRKMVEAMR 714
Cdd:PRK04863 930 LQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVvqrrahfsyedAAEMLAKNSDlneklRQRLEQAEQERTRAREQLR 1009
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 715 FTSAKMAQietENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENL-----QLQHSLESSTHKSQALQRELSQL 789
Cdd:PRK04863 1010 QAQAQLAQ---YNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERArarrdELHARLSANRSRRNQLEKQLTFC 1086
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 790 EAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRlwqqvELkdailddsaAKLSAAEKESRaL 869
Cdd:PRK04863 1087 EAEMDNLTKKLRKLERDYHEMREQVVNAKAGWCAVLRLVKDNGVERRLHRR-----EL---------AYLSADELRSM-S 1151
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47059089 870 DKELARCR------DVGSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKS-------QQLSSELDKLSQELE 933
Cdd:PRK04863 1152 DKALGALRlavadnEHLRDVLRLSEDPKRPERKVQFYIAVYQHLRERIRQDIIRTddpveaiEQMEIELSRLTEELT 1228
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
599-826 |
3.48e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 51.75 E-value: 3.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 599 AGSKLSQLELEKQQLHRDLEEAKEK----GEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEA-LEHQSQGLELENR 673
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAEldalQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAeIEERREELGERAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 674 SLRKSLDTLQNVSVQLEGlerdkQQLGQ--ENLELRKMVeaMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKS 751
Cdd:COG3883 94 ALYRSGGSVSYLDVLLGS-----ESFSDflDRLSALSKI--ADADADLLEELKADKAELEAKKAELEAKLAELEALKAEL 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47059089 752 ERLELSYQSVSAENLQLQHSLESsthKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQ 826
Cdd:COG3883 167 EAAKAELEAQQAEQEALLAQLSA---EEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 238
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
794-1004 |
4.02e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.22 E-value: 4.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 794 QALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEkdkkllekEARRLWQQVELKDAILddSAAKLSAAEKESRALDKEL 873
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLEPIRELAE--------RYAAARERLAELEYLR--AALRLWFAQRRLELLEAEL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 874 ARCRDvgsKLKELEKDNRDLTKQVTMHTRTLTTLREDL------VLEKLKSQ--QLSSELDKLSQELEKV-GLSKDLLLQ 944
Cdd:COG4913 298 EELRA---ELARLEAELERLEARLDALREELDELEAQIrgnggdRLEQLEREieRLERELEERERRRARLeALLAALGLP 374
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 945 EDDGHGDGKgKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQ 1004
Cdd:COG4913 375 LPASAEEFA-ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
112-797 |
4.63e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.89 E-value: 4.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 112 LSGKSMEEIKKVLLLVLGCAVQ-----CERKEEFIERIKQLDIETQ-AGIVAHIQEVTHNQENVFDLQWLDLPDVAPEEL 185
Cdd:TIGR00618 135 LLKLDYKTFTRVVLLPQGEFAQflkakSKEKKELLMNLFPLDQYTQlALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMP 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 186 EALS---RNMVFHLRRLIDERDECTELIVDLTQERDYLQTQQPPSPGKFSSPDSTPSPTSSLSSEDKQHLAVELADTKAR 262
Cdd:TIGR00618 215 DTYHerkQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAP 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 263 L--------------RRVRQELEEKTEQLADTRH----------EVDQLVLELQKAKQDNIQLAADARSARAYRDELDSL 318
Cdd:TIGR00618 295 LaahikavtqieqqaQRIHTELQSKMRSRAKLLMkraahvkqqsSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQ 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 319 REKANRVERLEMDLVRCKEKL--------------HDVDFYKARMEELREDNIILIETKAMLEEQLTASRARSDKVHELE 384
Cdd:TIGR00618 375 HTLTQHIHTLQQQKTTLTQKLqslckeldilqreqATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCE 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 385 KENLQLKSKLH---DLELDRDADKKQIEKLLEEYMVLEMAQKQSMKEsahlgwelEQLSKNADLSDASRKSFVFELNECA 461
Cdd:TIGR00618 455 KLEKIHLQESAqslKEREQQLQTKEQIHLQETRKKAVVLARLLELQE--------EPCPLCGSCIHPNPARQDIDNPGPL 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 462 SSRILKLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQ----LSKKIEKLQTQLEREKQSNQDLETLSEELIRE 537
Cdd:TIGR00618 527 TRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQsfsiLTQCDNRSKEDIPNLQNITVRLQDLTEKLSEA 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 538 KEQLQSGMEALKADRARQIKDLE-------------QEKGHLHQAVWSL---RERPQVNSTKDVEKENRALHQAvteags 601
Cdd:TIGR00618 607 EDMLACEQHALLRKLQPEQDLQDvrlhlqqcsqelaLKLTALHALQLTLtqeRVREHALSIRVLPKELLASRQL------ 680
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 602 KLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQG--LELENRSLRKSL 679
Cdd:TIGR00618 681 ALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKelMHQARTVLKART 760
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 680 DTLQNVSVQLEGLERDKQQLGQ--ENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLELS 757
Cdd:TIGR00618 761 EAHFNNNEEVTAALQTGAELSHlaAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEK 840
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 47059089 758 YQSVSAENLQLQHSLESSTHKSQALQR--ELSQLEAERQALR 797
Cdd:TIGR00618 841 SATLGEITHQLLKYEECSKQLAQLTQEqaKIIQLSDKLNGIN 882
|
|
| Tektin |
pfam03148 |
Tektin family; Tektins are cytoskeletal proteins. They have been demonstrated in such cellular ... |
525-804 |
5.45e-06 |
|
Tektin family; Tektins are cytoskeletal proteins. They have been demonstrated in such cellular sites as centrioles, basal bodies, and along ciliary and flagellar doublet microtubules. Tektins form unique protofilaments, organized as longitudinal polymers of tektin heterodimers with axial periodicity matching tubulin. Tektin polypeptides consist of several alpha-helical regions that are predicted to form coiled coils. Indeed, tektins share considerable structural similarities with intermediate filament proteins. Possible functional roles for tektins are: stabilization of tubulin protofilaments; attachment of A and B-tubules in ciliary/flagellar microtubule doublets and C-tubules in centrioles; binding of axonemal components.
Pssm-ID: 460827 [Multi-domain] Cd Length: 383 Bit Score: 51.01 E-value: 5.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 525 QDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSL--RE-RPQVNSTKD-VEKE-----------N 589
Cdd:pfam03148 53 QDITFWKSELEKELEELDEEIELLLEEKRRLEKALEALEEPLHIAQECLtlREkRQGIDLVHDeVEKEllkeveliegiQ 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 590 RALHQAVTEAGSKLSQLELEKQQLHRDLEEAKekgeqaEALEkelhrLEKENEQLTKEVT--SLKAATEKVEAL------ 661
Cdd:pfam03148 133 ELLQRTLEQAWEQLRLLRAARHKLEKDLSDKK------EALE-----IDEKCLSLNNTSPniSYKPGPTRIPPNsstpee 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 662 -EHQSQGL------ELEN-RSLRKSLD-TLQNVSVQLeglerdKQQLGQENLELRKMVEAMRftSAKmAQIETENRQLER 732
Cdd:pfam03148 202 wEKFTQDNieraekERAAsAQLRELIDsILEQTANDL------RAQADAVNFALRKRIEETE--DAK-NKLEWQLKKTLQ 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 733 EKEELRRDVELL-KTLSKKSE-------RLELSYQSVSAENL--QLQHSLESSTHK----SQALQRELSQLEAERQALRR 798
Cdd:pfam03148 273 EIAELEKNIEALeKAIRDKEAplklaqtRLENRTYRPNVELCrdEAQYGLVDEVKEleetIEALKQKLAEAEASLQALER 352
|
....*.
gi 47059089 799 DLETLQ 804
Cdd:pfam03148 353 TRLRLE 358
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
777-1378 |
5.58e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 51.76 E-value: 5.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 777 HKSQALQR------ELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVeLKDA 850
Cdd:pfam12128 228 RDIQAIAGimkirpEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEK-RDEL 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 851 ILDDSAAK--LSAAEKESRALDKELARCRDVGSKLKELEKDNRDLTK----QVTMHTRTLTTLREDL-----VLEKLKSQ 919
Cdd:pfam12128 307 NGELSAADaaVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQseleNLEERLKALTGKHQDVtakynRRRSKIKE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 920 QLSSELDKLSQELEKVGLSKDLLLQEDDGH------------------------------GDGKGKTESALKT--TLAMK 967
Cdd:pfam12128 387 QNNRDIAGIKDKLAKIREARDRQLAVAEDDlqaleselreqleagklefneeeyrlksrlGELKLRLNQATATpeLLLQL 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 968 EEKIVFLEAQVEEKESLSRQ---LQIELQMIKK-----------EHEQLRQTQEGGDKAQNALKRPPGKVTSHQEKEA-- 1031
Cdd:pfam12128 467 ENFDERIERAREEQEAANAEverLQSELRQARKrrdqasealrqASRRLEERQSALDELELQLFPQAGTLLHFLRKEApd 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1032 WEPSH-KEATMELLRVKD-----------------------------------RAIELERSNA--ALQAERQLLKEQLQH 1073
Cdd:pfam12128 547 WEQSIgKVISPELLHRTDldpevwdgsvggelnlygvkldlkridvpewaaseEELRERLDKAeeALQSAREKQAAAEEQ 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1074 LETQNVSFSSQILTLQKQSAFLQEHTTTL-----QTQTAKLQVENSTLSSQNAA------LSAQYTVL-QSQQAAKEAEH 1141
Cdd:pfam12128 627 LVQANGELEKASREETFARTALKNARLDLrrlfdEKQSEKDKKNKALAERKDSAnerlnsLEAQLKQLdKKHQAWLEEQK 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1142 EGLQQQQEQLAAVYEALLQDHK-HLGTLYECQSSEYEALIRQHSCLKTLHRNlELEHKEL-GERHGDLQQRKAELEE-LE 1218
Cdd:pfam12128 707 EQKREARTEKQAYWQVVEGALDaQLALLKAAIAARRSGAKAELKALETWYKR-DLASLGVdPDVIAKLKREIRTLERkIE 785
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1219 KVLSTEREALEREQKTNAIATSENQRLRGELDRISFLHQQLKGEYEELHAHTKelktsLNNSQLELSRwqvrfDELKEQH 1298
Cdd:pfam12128 786 RIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTK-----LRRAKLEMER-----KASEKQQ 855
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1299 QSMDISLTKMDNHCELLSRLK--GNLEEENHHLLSQIQLLSQQnQMLLEQNMESKEQYHEEQKQYIDKL--NALRRHKEK 1374
Cdd:pfam12128 856 VRLSENLRGLRCEMSKLATLKedANSEQAQGSIGERLAQLEDL-KLKRDYLSESVKKYVEHFKNVIADHsgSGLAETWES 934
|
....
gi 47059089 1375 LEEK 1378
Cdd:pfam12128 935 LREE 938
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
461-1266 |
6.11e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 51.50 E-value: 6.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 461 ASSRILKLEKENQSLQSTI----QGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQT---QLEREKQSNQDLETLSE- 532
Cdd:PRK04863 284 HLEEALELRRELYTSRRQLaaeqYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTalrQQEKIERYQADLEELEEr 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 533 ----------------ELIREKEQLQSGMEALKADRA--RQIKDLEQEK-GHLHQAVWSLRERPQVNSTKDVEKENralh 593
Cdd:PRK04863 364 leeqnevveeadeqqeENEARAEAAEEEVDELKSQLAdyQQALDVQQTRaIQYQQAVQALERAKQLCGLPDLTADN---- 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 594 qavteAGSKLSQLELEKQQLhrdleeakekGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENR 673
Cdd:PRK04863 440 -----AEDWLEEFQAKEQEA----------TEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSEAWDVARELLRR 504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 674 slrksLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRrdvELLKTLSKKSER 753
Cdd:PRK04863 505 -----LREQRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELE---ARLESLSESVSE 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 754 LELSYQSVSAENLQLQ---HSLESSTHKSQALQRELSQLEA---ERQALRRDLETLQLTHkqlegAEEDRkALEQEVAQL 827
Cdd:PRK04863 577 ARERRMALRQQLEQLQariQRLAARAPAWLAAQDALARLREqsgEEFEDSQDVTEYMQQL-----LERER-ELTVERDEL 650
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 828 EKDKKLLEKEARRLWQQ--------------------VELKDAILDDSAAKLSAAEKESR-ALdkelaRCRDVGSKLKEL 886
Cdd:PRK04863 651 AARKQALDEEIERLSQPggsedprlnalaerfggvllSEIYDDVSLEDAPYFSALYGPARhAI-----VVPDLSDAAEQL 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 887 EkdnrdltkqvtmhtrTLTTLREDLVLEKLKSQQL-SSELDklSQELEKvglskDLLLQEDDGHGDGKGKTESALKTTLA 965
Cdd:PRK04863 726 A---------------GLEDCPEDLYLIEGDPDSFdDSVFS--VEELEK-----AVVVKIADRQWRYSRFPEVPLFGRAA 783
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 966 mKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTqeggdkaqnalkrppgkVTSH-QEKEAWEPshkEATMELL 1044
Cdd:PRK04863 784 -REKRIEQLRAEREELAERYATLSFDVQKLQRLHQAFSRF-----------------IGSHlAVAFEADP---EAELRQL 842
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1045 RvkDRAIELERsnaalqaerqllkeQLQHLETQNVSFSSQILTLQKQSAFLQEhtttLQTQTAKLQVEnsTLSSQNAALS 1124
Cdd:PRK04863 843 N--RRRVELER--------------ALADHESQEQQQRSQLEQAKEGLSALNR----LLPRLNLLADE--TLADRVEEIR 900
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1125 AQytVLQSQQAAKE-AEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTL-----HRNLELEHK 1198
Cdd:PRK04863 901 EQ--LDEAEEAKRFvQQHGNALAQLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVvqrraHFSYEDAAE 978
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47059089 1199 ELGERHGDLQQRKAELEELEKVLSTEREALEREQKTNAIATSENQRLRGELDRISFLHQQLKGEYEEL 1266
Cdd:PRK04863 979 MLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDL 1046
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
195-523 |
6.30e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.61 E-value: 6.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 195 HLRRLIDERDECTELIVDLTQERDYLQTQQppspgkfsspdSTPSPTSSLSSEDKQHLAVELADTKARLRRVRQELEEKT 274
Cdd:TIGR02169 703 RLDELSQELSDASRKIGEIEKEIEQLEQEE-----------EKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELE 771
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 275 EQLADTRHEVDQLVLELQKAKQDNIQlaadaRSARAYRDELDSLREKANRVERLEMDLVRCKEKLHD--------VDFYK 346
Cdd:TIGR02169 772 EDLHKLEEALNDLEARLSHSRIPEIQ-----AELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKeiqelqeqRIDLK 846
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 347 ARMEELR----EDNIILIETKAMLEEQLTASRARSDKVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEEYMVLEMAQ 422
Cdd:TIGR02169 847 EQIKSIEkeieNLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKL 926
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 423 KQSMKESAHLGWELEQLSknadlsdasrksfvfELNECASSrILKLEKENQSLQSTIQGLRDTSLA----LEESSLKYGE 498
Cdd:TIGR02169 927 EALEEELSEIEDPKGEDE---------------EIPEEELS-LEDVQAELQRVEEEIRALEPVNMLaiqeYEEVLKRLDE 990
|
330 340
....*....|....*....|....*...
gi 47059089 499 LEKENQQL---SKKIEKLQTQLEREKQS 523
Cdd:TIGR02169 991 LKEKRAKLeeeRKAILERIEEYEKKKRE 1018
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
533-1018 |
7.50e-06 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 50.84 E-value: 7.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 533 ELIREKEQLQSGMEALKadraRQIKDLEQEKGHLHQAVWSLRERpqVNSTKDVEKENralhqavTEAGSKLSQLELEKQQ 612
Cdd:pfam05622 4 EAQEEKDELAQRCHELD----QQVSLLQEEKNSLQQENKKLQER--LDQLESGDDSG-------TPGGKKYLLLQKQLEQ 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 613 LHRD---LEEAKEKGEQ-AEALEKELHRLEKENEQLTK----------EVTSLKAATEKVEALEHQSQglelenrSLRKS 678
Cdd:pfam05622 71 LQEEnfrLETARDDYRIkCEELEKEVLELQHRNEELTSlaeeaqalkdEMDILRESSDKVKKLEATVE-------TYKKK 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 679 LDTLQNVSVQLEGLERDKQQLGQENLELRkmvEAMRFTSAKMAQIETENRQLErekeELRRDvelLKTLSKKSERLELSY 758
Cdd:pfam05622 144 LEDLGDLRRQVKLLEERNAEYMQRTLQLE---EELKKANALRGQLETYKRQVQ----ELHGK---LSEESKKADKLEFEY 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 759 QsvsaeNLQLQHSlessthksqALQRELSQLEAERQALRRDLETLQLTHKQlegaeedRKALEQEVAQLEKDKKLLEKEA 838
Cdd:pfam05622 214 K-----KLEEKLE---------ALQKEKERLIIERDTLRETNEELRCAQLQ-------QAELSQADALLSPSSDPGDNLA 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 839 RRLwQQVELKDailddsaaKLSAAEKESRALdkelaRCRDVGSKLKELEkdnrDLTKQVTMHTRTLTTLREDLvleKLKS 918
Cdd:pfam05622 273 AEI-MPAEIRE--------KLIRLQHENKML-----RLGQEGSYRERLT----ELQQLLEDANRRKNELETQN---RLAN 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 919 QQLSSeldkLSQELEKVGLSkdllLQEDDGHGDGkgktESALKTTLAMKEEKIVFLEAQVEEKeslsrQLQIElqmiKKE 998
Cdd:pfam05622 332 QRILE----LQQQVEELQKA----LQEQGSKAED----SSLLKQKLEEHLEKLHEAQSELQKK-----KEQIE----ELE 390
|
490 500
....*....|....*....|
gi 47059089 999 HEQLRQTQEGGDKAQNALKR 1018
Cdd:pfam05622 391 PKQDSNLAQKIDELQEALRK 410
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
617-756 |
7.90e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 51.01 E-value: 7.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 617 LEEAKEKgEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQnvsvqlEGLERDK 696
Cdd:COG2433 382 LEELIEK-ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLE------RELSEAR 454
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 697 QQLGQENLELRKmVEAMRftsAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLEL 756
Cdd:COG2433 455 SEERREIRKDRE-ISRLD---REIERLERELEEERERIEELKRKLERLKELWKLEHSGEL 510
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
470-866 |
9.80e-06 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 50.28 E-value: 9.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 470 KENQSLQSTIQGLRDT-SLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEAl 548
Cdd:pfam07888 104 KELSASSEELSEEKDAlLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQ- 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 549 kadrarqikdleqekghlhqavwslrerpqvnstkdVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAe 628
Cdd:pfam07888 183 ------------------------------------TEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTA- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 629 alekelHRLEKENEQLTKEVTSLKaatEKVEALEHQSQGLELENRSLRKSLDTLQnvsvqlEGLERDKQQLGQENLELRK 708
Cdd:pfam07888 226 ------HRKEAENEALLEELRSLQ---ERLNASERKVEGLGEELSSMAAQRDRTQ------AELHQARLQAAQLTLQLAD 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 709 MVEAMRFTSAKMAQietenrqlerEKEELRRDVELLKtlskksERLElsyqSVSAENLQLQHSLESSTHKSQALQRELS- 787
Cdd:pfam07888 291 ASLALREGRARWAQ----------ERETLQQSAEADK------DRIE----KLSAELQRLEERLQEERMEREKLEVELGr 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 788 -------QLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDkklLEKEARRLWQQVELKDAILDDSAakLS 860
Cdd:pfam07888 351 ekdcnrvQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQR---LETVADAKWSEAALTSTERPDSP--LS 425
|
....*.
gi 47059089 861 AAEKES 866
Cdd:pfam07888 426 DSEDEN 431
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
921-1360 |
1.04e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.54 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 921 LSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHE 1000
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1001 QLRQTQEgGDKAQNALKRPPGKVTSHQEKEAwepSHKEATMELLRVKDRAIELERS-NAALQAERQLLKEQLQHLETQNV 1079
Cdd:COG4717 127 LLPLYQE-LEALEAELAELPERLEELEERLE---ELRELEEELEELEAELAELQEElEELLEQLSLATEEELQDLAEELE 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1080 SFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQN--------------------------------------- 1120
Cdd:COG4717 203 ELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEErlkearlllliaaallallglggsllsliltiagvlflv 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1121 -AALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRNLELEHKE 1199
Cdd:COG4717 283 lGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEE 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1200 LgerhgDLQQRKAELEEL-EKVLSTEREALEReqktNAIATSENQRLRGELDRIS-FLHQQLKGEYEELHAHTKE-LKTS 1276
Cdd:COG4717 363 L-----QLEELEQEIAALlAEAGVEDEEELRA----ALEQAEEYQELKEELEELEeQLEELLGELEELLEALDEEeLEEE 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1277 LNNSQLELSRWQVRFDELKEQHQSMDISLTKMDNhcellSRLKGNLEEENHHLLSQIQLLSQQNQ--MLLEQNMESKEQY 1354
Cdd:COG4717 434 LEELEEELEELEEELEELREELAELEAELEQLEE-----DGELAELLQELEELKAELRELAEEWAalKLALELLEEAREE 508
|
....*.
gi 47059089 1355 HEEQKQ 1360
Cdd:COG4717 509 YREERL 514
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
976-1240 |
1.14e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 976 AQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRppgkvtshQEKEAwepshKEATMELLRVKDRAIELER 1055
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAA--------LERRI-----AALARRIRALEQELAALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1056 SNAALQAERQLLKEQLQHLETQnvsFSSQILTLQKQSaflqehtttlqtQTAKLQVENSTLSSQNAALSAQYtvLQSQQA 1135
Cdd:COG4942 84 ELAELEKEIAELRAELEAQKEE---LAELLRALYRLG------------RQPPLALLLSPEDFLDAVRRLQY--LKYLAP 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1136 AKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKAELE 1215
Cdd:COG4942 147 ARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
250 260
....*....|....*....|....*
gi 47059089 1216 ELEKVLSTEREALEREQKTNAIATS 1240
Cdd:COG4942 227 ALIARLEAEAAAAAERTPAAGFAAL 251
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
782-1284 |
1.16e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.42 E-value: 1.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 782 LQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKE----ARRLWQQVELKDAILDDSAA 857
Cdd:PRK02224 218 LDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREreelAEEVRDLRERLEELEEERDD 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 858 KLSAAEKESRALDKELARCRDVGSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEKVGL 937
Cdd:PRK02224 298 LLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEARE 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 938 SKDlllqeddghgDGKGKTEsALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDK--AQNA 1015
Cdd:PRK02224 378 AVE----------DRREEIE-ELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARErvEEAE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1016 LKRPPGKV-TSHQEKEawEPSHKEATMEllrVKDRAIELERSNAALQAERQLLKEQLQHLETQnVSFSSQILTLQKQSAF 1094
Cdd:PRK02224 447 ALLEAGKCpECGQPVE--GSPHVETIEE---DRERVEELEAELEDLEEEVEEVEERLERAEDL-VEAEDRIERLEERRED 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1095 LQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQsS 1174
Cdd:PRK02224 521 LEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLL-A 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1175 EYEALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKAELEEL--EKVLSTEREALEREQKTNAIATSENQRLRGELDRI 1252
Cdd:PRK02224 600 AIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDELREERDDL 679
|
490 500 510
....*....|....*....|....*....|..
gi 47059089 1253 SFLHQQLKGEYEELHAHTKELKtSLNNSQLEL 1284
Cdd:PRK02224 680 QAEIGAVENELEELEELRERRE-ALENRVEAL 710
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
195-657 |
1.28e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.50 E-value: 1.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 195 HLRRLIDERDecteliVDLTQERDYLQTQQPPSPGKFSSpDSTPSPTSSLSSEDKQHLAVELADTKARLRRVRQELEEKT 274
Cdd:pfam15921 416 HLRRELDDRN------MEVQRLEALLKAMKSECQGQMER-QMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKK 488
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 275 EQLADTRHEVDQLVLELQKAKqdniqlaadaRSARAYRDELDSLREKanrverleMDLvrckeKLHDVDFYKARMEELRE 354
Cdd:pfam15921 489 MTLESSERTVSDLTASLQEKE----------RAIEATNAEITKLRSR--------VDL-----KLQELQHLKNEGDHLRN 545
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 355 dniilIETKAmleEQLTASRARSDKVHELEKENLQLKSKLHDlELDRDADKKQIEKlleeymvlemaqKQSMKESAHLGW 434
Cdd:pfam15921 546 -----VQTEC---EALKLQMAEKDKVIEILRQQIENMTQLVG-QHGRTAGAMQVEK------------AQLEKEINDRRL 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 435 ELEQLSKNADLSDASRKSFvfelnecaSSRILKLEKENQSL-QSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKL 513
Cdd:pfam15921 605 ELQEFKILKDKKDAKIREL--------EARVSDLELEKVKLvNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDY 676
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 514 QTQLEREKQSNQDLETLSEELireKEQLQSGMEALKADRaRQIKDLEQEKGHLHQAVWSLR-----ERPQVNStkdVEKE 588
Cdd:pfam15921 677 EVLKRNFRNKSEEMETTTNKL---KMQLKSAQSELEQTR-NTLKSMEGSDGHAMKVAMGMQkqitaKRGQIDA---LQSK 749
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 589 NRALHQAVTEAGSKLSQLELEKQQLHRDLEE-AKEKGEQAealeKELHRLEKENEQLTKEVTSLKAATEK 657
Cdd:pfam15921 750 IQFLEEAMTNANKEKHFLKEEKNKLSQELSTvATEKNKMA----GELEVLRSQERRLKEKVANMEVALDK 815
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
594-837 |
1.66e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 50.30 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 594 QAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQL-------TKEVTSLKAATEKVEALEHQSQ 666
Cdd:PRK11281 42 QAQLDALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQApaklrqaQAELEALKDDNDEETRETLSTL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 667 GL-ELENRsLRKSLDTLQNVSVQLegLERDKQQLGQENLELRKMVeAMRFTSAKMAQIeteNRQLEREKEELRRDVELLK 745
Cdd:PRK11281 122 SLrQLESR-LAQTLDQLQNAQNDL--AEYNSQLVSLQTQPERAQA-ALYANSQRLQQI---RNLLKGGKVGGKALRPSQR 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 746 TLskkserLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQ--LTHKQLEGAEED-RKALEQ 822
Cdd:PRK11281 195 VL------LQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLLQeaINSKRLTLSEKTvQEAQSQ 268
|
250
....*....|....*
gi 47059089 823 EVAQLEKDKKLLEKE 837
Cdd:PRK11281 269 DEAARIQANPLVAQE 283
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
346-982 |
2.35e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 49.69 E-value: 2.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 346 KARMEELREDNIILIETKAM--LEEQLTASRARSDKVHELEKENLQLKSKLhdLELDRDADKKQIEKLleeymvlemaqK 423
Cdd:COG5022 858 KKRFSLLKKETIYLQSAQRVelAERQLQELKIDVKSISSLKLVNLELESEI--IELKKSLSSDLIENL-----------E 924
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 424 QSMKESAHLgwelEQLSKNADLSDASRKSFVfelnecassrilkLEKENQSLQSTIQGLRDTSLaleesslkygELEKEN 503
Cdd:COG5022 925 FKTELIARL----KKLLNNIDLEEGPSIEYV-------------KLPELNKLHEVESKLKETSE----------EYEDLL 977
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 504 QQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQlqsgmealkadrARQIKDLEQEKGHLHQAVWSLRERPQ-VNST 582
Cdd:COG5022 978 KKSTILVREGNKANSELKNFKKELAELSKQYGALQES------------TKQLKELPVEVAELQSASKIISSESTeLSIL 1045
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 583 KDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKekgeQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALE 662
Cdd:COG5022 1046 KPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLY----QLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQ 1121
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 663 HQSQGLELE-NRSLRKSLDTLQNVSVQLEGLERDKQQLGQEnlelrKMVEAMRFTSAKMAQIETENRQLEREKEELRRDV 741
Cdd:COG5022 1122 MIKLNLLQEiSKFLSQLVNTLEPVFQKLSVLQLELDGLFWE-----ANLEALPSPPPFAALSEKRLYQSALYDEKSKLSS 1196
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 742 ELLKTLskKSERLELSYQSVSAENLQLqHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALE 821
Cdd:COG5022 1197 SEVNDL--KNELIALFSKIFSGWPRGD-KLKKLISEGWVPTEYSTSLKGFNNLNKKFDTPASMSNEKLLSLLNSIDNLLS 1273
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 822 QEVAQLEkdkkLLEKEARRLWQQVELKDA---ILDDSAAKLSAAEKESRALDKELARCRDVG--------------SKLK 884
Cdd:COG5022 1274 SYKLEEE----VLPATINSLLQYINVGLFnalRTKASSLRWKSATEVNYNSEELDDWCREFEisdvdeeleeliqaVKVL 1349
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 885 ELEKDNRDLTKQVTMHTRTLTTLRedlvLEKLKSQ-QLSSELDKLSQELEKvGLSKDLLLQEDDGHGDGKGKTESALKTT 963
Cdd:COG5022 1350 QLLKDDLNKLDELLDACYSLNPAE----IQNLKSRyDPADKENNLPKEILK-KIEALLIKQELQLSLEGKDETEVHLSEI 1424
|
650
....*....|....*....
gi 47059089 964 LAMKEEKIvFLEAQVEEKE 982
Cdd:COG5022 1425 FSEEKSLI-SLDRNSIYKE 1442
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
728-1158 |
2.38e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.38 E-value: 2.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 728 RQLEREKEELRRDVELLKTLSKKSERlelsYQSVSAENLQLQHSLESSTHKSQALQRELSQLE---------AERQALRR 798
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEE----YAELQEELEELEEELEELEAELEELREELEKLEkllqllplyQELEALEA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 799 DLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVEL-KDAILDDSAAKLSAAEKESRALDKELARCR 877
Cdd:COG4717 140 ELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLaTEEELQDLAEELEELQQRLAELEEELEEAQ 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 878 DVGSKLK------ELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLSSELD-------------KLSQELEKVGLS 938
Cdd:COG4717 220 EELEELEeeleqlENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlgllaLLFLLLAREKAS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 939 KDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQtQEGGDKAQNALKR 1018
Cdd:COG4717 300 LGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQL-EELEQEIAALLAE 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1019 ppGKVTSHQEKEAWEPSHKEAtMELLRvkdraiELERSNAALQAERQLLKEQLQHLETQNVsfSSQILTLQKQSAFLQEH 1098
Cdd:COG4717 379 --AGVEDEEELRAALEQAEEY-QELKE------ELEELEEQLEELLGELEELLEALDEEEL--EEELEELEEELEELEEE 447
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1099 TTTLQTQTAKLQVENSTLSSQNAalsaqYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEAL 1158
Cdd:COG4717 448 LEELREELAELEAELEQLEEDGE-----LAELLQELEELKAELRELAEEWAALKLALELL 502
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
519-904 |
2.74e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 49.57 E-value: 2.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 519 REKQsnqdLETLSEELIREKEQL-QSGMEALKADRARQikDLEQEKGhLHQAVW----------SLRERPQvnstkDVEK 587
Cdd:COG3096 783 REKR----LEELRAERDELAEQYaKASFDVQKLQRLHQ--AFSQFVG-GHLAVAfapdpeaelaALRQRRS-----ELER 850
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 588 ENRALHQAVTEAGSKLSQLELEKQQLHRDL---------------EEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLK 652
Cdd:COG3096 851 ELAQHRAQEQQLRQQLDQLKEQLQLLNKLLpqanlladetladrlEELREELDAAQEAQAFIQQHGKALAQLEPLVAVLQ 930
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 653 AATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLE-RDKQQLGQENlelRKMVEAMRftsakmaqietenRQLE 731
Cdd:COG3096 931 SDPEQFEQLQADYLQAKEQQRRLKQQIFALSEVVQRRPHFSyEDAVGLLGEN---SDLNEKLR-------------ARLE 994
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 732 REKEELRRDVELLKtlskkserlelSYQSVSAENLQLQHSLESSthkSQALQRELSQLEAERQALrrdleTLQLTHKQLE 811
Cdd:COG3096 995 QAEEARREAREQLR-----------QAQAQYSQYNQVLASLKSS---RDAKQQTLQELEQELEEL-----GVQADAEAEE 1055
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 812 GAEEDRKALEQEVAQLEKDKKLLEKearrlwqQVELKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNr 891
Cdd:COG3096 1056 RARIRRDELHEELSQNRSRRSQLEK-------QLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAKAGWCAVLRLARDN- 1127
|
410
....*....|...
gi 47059089 892 DLTKQVtmHTRTL 904
Cdd:COG3096 1128 DVERRL--HRREL 1138
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1053-1252 |
2.80e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.24 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1053 LERSNAALQAERQLLKEQLQHLEtqnvsfsSQILTLQKQ-SAFLQEHtttlqtQTAKLQVENSTLSSQNAALSAQYTVLQ 1131
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELR-------KELEEAEAAlEEFRQKN------GLVDLSEEAKLLLQQLSELESQLAEAR 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1132 SQQAAKEAEHEGLQQQQEQLAAVYEALLQDhkhlgtlyecqsSEYEALIRQhscLKTLHRNLELEHKELGERHGDLQQRK 1211
Cdd:COG3206 233 AELAEAEARLAALRAQLGSGPDALPELLQS------------PVIQQLRAQ---LAELEAELAELSARYTPNHPDVIALR 297
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 47059089 1212 AELEELEKVLSTEREALEREQKTN-AIATSENQRLRGELDRI 1252
Cdd:COG3206 298 AQIAALRAQLQQEAQRILASLEAElEALQAREASLQAQLAQL 339
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
882-1317 |
3.38e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 3.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 882 KLKELEKDNRDLTKQVtmhtRTLTTLREDLvleklksQQLSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKteSALK 961
Cdd:COG4717 72 ELKELEEELKEAEEKE----EEYAELQEEL-------EELEEELEELEAELEELREELEKLEKLLQLLPLYQEL--EALE 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 962 TTLAMKEEKIVFLEAQVEEkeslSRQLQIELQMIKKEHEQLRQtqeggdKAQNALKRppgkvTSHQEKEAWEpshkEATM 1041
Cdd:COG4717 139 AELAELPERLEELEERLEE----LRELEEELEELEAELAELQE------ELEELLEQ-----LSLATEEELQ----DLAE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1042 ELLRVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQiLTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNA 1121
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALE-ERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1122 A------LSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRNLEL 1195
Cdd:COG4717 279 LflvlglLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1196 EHKEL---------------------------GERHGDLQQRKAELEELEKVLSTEREALEREQKTN--AIATSENQRLR 1246
Cdd:COG4717 359 LEEELqleeleqeiaallaeagvedeeelraaLEQAEEYQELKEELEELEEQLEELLGELEELLEALdeEELEEELEELE 438
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 1247 GELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSRWQV--RFDELKEQHQSMDISLTKMDNHCELLSR 1317
Cdd:COG4717 439 EELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELkaELRELAEEWAALKLALELLEEAREEYRE 511
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
514-1165 |
3.45e-05 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 49.03 E-value: 3.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 514 QTQLEREKQSNQDLETLSEElirEKEQLQSGMEALKADRARQIKDLEQEKGHLHqavWSLRERPQVNSTKDVEKENRALH 593
Cdd:PRK10246 197 RTELEKLQAQASGVALLTPE---QVQSLTASLQVLTDEEKQLLTAQQQQQQSLN---WLTRLDELQQEASRRQQALQQAL 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 594 QAVTEAGSKLSQLELekQQLHRDLEEAKEK-GEQAEALEKELHRLEKENEQLtKEVTSLKAATEKVEALEHQSQGLEL-- 670
Cdd:PRK10246 271 AAEEKAQPQLAALSL--AQPARQLRPHWERiQEQSAALAHTRQQIEEVNTRL-QSTMALRARIRHHAAKQSAELQAQQqs 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 671 ------ENRSLRKSLDTLQNVSVQLEGLERDKQQLGQEN---LELRKMVEAMRFTSAKM-AQIETENRQLEREKEELR-R 739
Cdd:PRK10246 348 lntwlaEHDRFRQWNNELAGWRAQFSQQTSDREQLRQWQqqlTHAEQKLNALPAITLTLtADEVAAALAQHAEQRPLRqR 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 740 DVELLKTLSKKSERLElsyqsvsaenlQLQHSLessthksQALQRELSQLEAERQALRRDLETLQ---LTHKQLEGAEED 816
Cdd:PRK10246 428 LVALHGQIVPQQKRLA-----------QLQVAI-------QNVTQEQTQRNAALNEMRQRYKEKTqqlADVKTICEQEAR 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 817 RKALEQEVAQLEKDKKLL-----EKEARRLWQQVELkdailDDSAAKLSAAEKESRALDKELARCRDvgsklkELEKdnr 891
Cdd:PRK10246 490 IKDLEAQRAQLQAGQPCPlcgstSHPAVEAYQALEP-----GVNQSRLDALEKEVKKLGEEGAALRG------QLDA--- 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 892 dLTKQVTMHTRTLTTLREDlvleklkSQQLSSELDKLSqelekvglskdlllqeddghgdgkgkteSALKTTLAMKEEKI 971
Cdd:PRK10246 556 -LTKQLQRDESEAQSLRQE-------EQALTQQWQAVC----------------------------ASLNITLQPQDDIQ 599
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 972 VFLEAQVE---------EKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRP---PGKVTS-----HQEKEAWEP 1034
Cdd:PRK10246 600 PWLDAQEEherqlrllsQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTlpqEDEEASwlatrQQEAQSWQQ 679
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1035 SHKEAT---MELLRVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQ-TAKLQ 1110
Cdd:PRK10246 680 RQNELTalqNRIQQLTPLLETLPQSDDLPHSEETVALDNWRQVHEQCLSLHSQLQTLQQQDVLEAQRLQKAQAQfDTALQ 759
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1111 veNSTLSSQNAALSA-----QYTVLQSQQAAKEAEHEglqqQQEQLAAVYEALLQDHKHL 1165
Cdd:PRK10246 760 --ASVFDDQQAFLAAlldeeTLTQLEQLKQNLENQRQ----QAQTLVTQTAQALAQHQQH 813
|
|
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
595-849 |
4.17e-05 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 47.88 E-value: 4.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 595 AVTEAGSKLSQLELEKQQLHRDLEEAKEKgeqaeALEKELHRLEKENEQLTKEVTSLKAATEKVEA-----------LEH 663
Cdd:pfam15905 48 STPATARKVKSLELKKKSQKNLKESKDQK-----ELEKEIRALVQERGEQDKRLQALEEELEKVEAklnaavrektsLSA 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 664 QSQGLELENRSLRKSLDTLQNvSVQLEGLERDKQQLGQENLELRKMVEA-MRFTSAKMAQIETENRQLEREKEELRRDVE 742
Cdd:pfam15905 123 SVASLEKQLLELTRVNELLKA-KFSEDGTQKKMSSLSMELMKLRNKLEAkMKEVMAKQEGMEGKLQVTQKNLEHSKGKVA 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 743 LLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLThkqlegAEEDRKALEQ 822
Cdd:pfam15905 202 QLEEKLVSTEKEKIEEKSETEKLLEYITELSCVSEQVEKYKLDIAQLEELLKEKNDEIESLKQS------LEEKEQELSK 275
|
250 260
....*....|....*....|....*..
gi 47059089 823 EVAQLEKDKKLLEKEARRLWQQVELKD 849
Cdd:pfam15905 276 QIKDLNEKCKLLESEKEELLREYEEKE 302
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
607-866 |
5.10e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 48.42 E-value: 5.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 607 ELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVtSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVS 686
Cdd:COG5185 264 DLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSI-DIKKATESLEEQLAAAEAEQELEESKRETETGIQNLT 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 687 VQLEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDV-ELLKTLSKKSERLELSYQSVSAEN 765
Cdd:COG5185 343 AEIEQGQESLTENLEAIKEEIENIVGEVELSKSSEELDSFKDTIESTKESLDEIPqNQRGYAQEILATLEDTLKAADRQI 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 766 LQLQHSLESSTHKSQALQRELSQLEAERQALRR---DLETLQLTHKQLEGAEEDR-------KALEQEVAQLEKDKKLLE 835
Cdd:COG5185 423 EELQRQIEQATSSNEEVSKLLNELISELNKVMReadEESQSRLEEAYDEINRSVRskkedlnEELTQIESRVSTLKATLE 502
|
250 260 270
....*....|....*....|....*....|.
gi 47059089 836 KEARRLWQQVELKDAILDDSAAKLSAAEKES 866
Cdd:COG5185 503 KLRAKLERQLEGVRSKLDQVAESLKDFMRAR 533
|
|
| GOLGA2L5 |
pfam15070 |
Putative golgin subfamily A member 2-like protein 5; The function of the GOLGA2L5 protein ... |
540-1010 |
6.87e-05 |
|
Putative golgin subfamily A member 2-like protein 5; The function of the GOLGA2L5 protein family remains unknown. This family of proteins is thought to be found in the Golgi apparatus of eukaryotes.
Pssm-ID: 464485 [Multi-domain] Cd Length: 521 Bit Score: 47.75 E-value: 6.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 540 QLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRErpQVNSTKDvEKENRALHQAVTEAgsklSQLELEKQQLHRDLEE 619
Cdd:pfam15070 1 QLMESLKQLQTERDQYAENLKEEGAVWQQKMQQLSE--QVRTLRE-EKERSVSQVQELET----SLAELKNQAAVPPAEE 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 620 AKEKG---EQAEALEKELHRLEKENEQLTKEvtsLKAATEKVEALEHQSQglELENRslrksldtlqnvsvqLEGLERDK 696
Cdd:pfam15070 74 EQPPAgpsEEEQRLQEEAEQLQKELEALAGQ---LQAQVQDNEQLSRLNQ--EQEQR---------------LLELERAA 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 697 QQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRdvellktlskkserlelSYQSVSAENLQLQHSLESST 776
Cdd:pfam15070 134 ERWGEQAEDRKQILEDMQSDRATISRALSQNRELKEQLAELQN-----------------GFVKLTNENMELTSALQSEQ 196
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 777 HKSQALQRELSQLEAERQALRrdlETLQLTHKQLEGAEEDRKA----LEQEVA---QLEKDKKLLEKEarrLWQQVELKD 849
Cdd:pfam15070 197 HVKKELAKKLGQLQEELGELK---ETLELKSQEAQSLQEQRDQylahLQQYVAayqQLASEKEELHKQ---YLLQTQLMD 270
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 850 AILDDSAAKLSAAEKESraldKELARCRDvgsKLKELEKDNRDLTKQvtmhtrtlttlredlvlekLKSQQLSSELDKL- 928
Cdd:pfam15070 271 RLQHEEVQGKVAAEMAR----QELQETQE---RLEALTQQNQQLQAQ-------------------LSLLANPGEGDGLe 324
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 929 SQELEKVGLSKDLLLQEDdghGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEG 1008
Cdd:pfam15070 325 SEEEEEEAPRPSLSIPED---FESREAMVAFFNSALAQAEEERAELRRQLKEQKRRCRRLAQQAAPAQEEPEHEAHAPGT 401
|
..
gi 47059089 1009 GD 1010
Cdd:pfam15070 402 GG 403
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
250-834 |
7.15e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 47.89 E-value: 7.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 250 QHLAVELADTKARLRRVRQELEEKTEQLAD-TRHEVDQLVLELQKAKqdniqLAADARSARAYRDELDSLREKA--NRVE 326
Cdd:pfam10174 195 GHLEVLLDQKEKENIHLREELHRRNQLQPDpAKTKALQTVIEMKDTK-----ISSLERNIRDLEDEVQMLKTNGllHTED 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 327 RLE----MDLVRCKEKlhdvdFYKARMEELREDniilietkamleeqltasrarsdkVHELEKENLQLKSKLHDLELDRD 402
Cdd:pfam10174 270 REEeikqMEVYKSHSK-----FMKNKIDQLKQE------------------------LSKKESELLALQTKLETLTNQNS 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 403 ADKKQIEKLLEEYMVLEmaqkqsmKESAHLGWELEQLSKNADlsdaSRKSFvfeLNEcASSRILKLEKENQSLQSTIQGL 482
Cdd:pfam10174 321 DCKQHIEVLKESLTAKE-------QRAAILQTEVDALRLRLE----EKESF---LNK-KTKQLQDLTEEKSTLAGEIRDL 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 483 RDTslaLEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLS----------EELIREKEQLqsgMEALKADR 552
Cdd:pfam10174 386 KDM---LDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSsntdtalttlEEALSEKERI---IERLKEQR 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 553 AR-------QIKDLEQEKGHLHQAVWSLRER--PQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQlhrdleeakeK 623
Cdd:pfam10174 460 ERedrerleELESLKKENKDLKEKVSALQPEltEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQ----------K 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 624 GEQAEALEKELhrleKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNV--SVQLEGLERDKQQLGQ 701
Cdd:pfam10174 530 KEECSKLENQL----KKAHNAEEAVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERLLGIlrEVENEKNDKDKKIAEL 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 702 ENLELRKMVE-AMRFTSAKMAQIETENRQLE------REKEELRRDV------ELLKTLSKKSERLELSYQSVSAenlqL 768
Cdd:pfam10174 606 ESLTLRQMKEqNKKVANIKHGQQEMKKKGAQlleearRREDNLADNSqqlqleELMGALEKTRQELDATKARLSS----T 681
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 769 QHSLESSthksqalQRELSQLEAERqalRRDLETLqLTHKQ----------------LEGAEEDRKALEQEVAQLEKDKK 832
Cdd:pfam10174 682 QQSLAEK-------DGHLTNLRAER---RKQLEEI-LEMKQeallaaisekdanialLELSSSKKKKTQEEVMALKREKD 750
|
..
gi 47059089 833 LL 834
Cdd:pfam10174 751 RL 752
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1751-2002 |
7.76e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.86 E-value: 7.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1751 EAEALAGMPSRQV-----QPPQSLSLGRPRQTtmtqnchmpVSRSASLSRAFSLASadllRASGPEACRPESPQKPGGHE 1825
Cdd:PHA03307 12 EAAAEGGEFFPRPpatpgDAADDLLSGSQGQL---------VSDSAELAAVTVVAG----AAACDRFEPPTGPPPGPGTE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1826 AAGARETSTHSLQGSHILAR-ERTPIVGKADSPSPGQGT----------------RGRPLDTRRFSLAPPKEERLAPLQQ 1888
Cdd:PHA03307 79 APANESRSTPTWSLSTLAPAsPAREGSPTPPGPSSPDPPpptpppaspppspapdLSEMLRPVGSPGPPPAASPPAAGAS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1889 SATAPALATGCSSGSNPqiqhfSPTVAPAVRTKSKVPqhsgevATVAPVRPGLGTSEGDGGPGHGYSEG--LLTKSPGRS 1966
Cdd:PHA03307 159 PAAVASDAASSRQAALP-----LSSPEETARAPSSPP------AEPPPSTPPAAASPRPPRRSSPISASasSPAPAPGRS 227
|
250 260 270
....*....|....*....|....*....|....*.
gi 47059089 1967 SDLPPHVKRGPDDFSQGSSSKSTPASPEPGGDPQTV 2002
Cdd:PHA03307 228 AADDAGASSSDSSSSESSGCGWGPENECPLPRPAPI 263
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
255-548 |
7.99e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 48.13 E-value: 7.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 255 ELADTKARLRRVRQELEEkteqladtrhevdqlvlelqKAKQDNIQLAADARSARAYRDELDSLREKA----NRVERLEM 330
Cdd:TIGR02168 772 EAEEELAEAEAEIEELEA--------------------QIEQLKEELKALREALDELRAELTLLNEEAanlrERLESLER 831
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 331 DLVRCKEKLHDVDFYKARMEELREDNIilietkamleeqltasrarsdkvHELEkenlqlksklhDLELDRDADKKQIEK 410
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIESLA-----------------------AEIE-----------ELEELIEELESELEA 877
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 411 LLEEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKsfvfELNECASSRILKLEKENQSLQSTIQGLR-DTSLAL 489
Cdd:TIGR02168 878 LLNERASLEEALALLRSELEELSEELRELESKRSELRRELE----ELREKLAQLELRLEGLEVRIDNLQERLSeEYSLTL 953
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 490 EESSLKYGELEKENQQLSKKIEKLQTQL--------------EREKQSNQDLETLSEELIREKEQLQSGMEAL 548
Cdd:TIGR02168 954 EEAEALENKIEDDEEEARRRLKRLENKIkelgpvnlaaieeyEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
254-698 |
8.45e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.91 E-value: 8.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 254 VELADTKARLRRVRQELEEKTEQLADTRHevdQLVLELQKAKQDNIQ-LAADARSARAYRDELDSLREKANRVERLEMDL 332
Cdd:pfam12128 506 EALRQASRRLEERQSALDELELQLFPQAG---TLLHFLRKEAPDWEQsIGKVISPELLHRTDLDPEVWDGSVGGELNLYG 582
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 333 VRCKEKLHDVDFYKARMEELREDniilietKAMLEEQLTASRarsDKVHELEKENLQLksklhdleldrdadKKQIEKLL 412
Cdd:pfam12128 583 VKLDLKRIDVPEWAASEEELRER-------LDKAEEALQSAR---EKQAAAEEQLVQA--------------NGELEKAS 638
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 413 EEYMVLEMAQKQSMKESAHLGWELEQLSKNADLSDASRKSFVFElnecassRILKLEKENQSLQSTIQglrdtsLALEes 492
Cdd:pfam12128 639 REETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANE-------RLNSLEAQLKQLDKKHQ------AWLE-- 703
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 493 slkygelEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIK----------DLEQE 562
Cdd:pfam12128 704 -------EQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLAslgvdpdviaKLKRE 776
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 563 KGHLHQAVWSL-RERPQVNSTKDVEKENRALHQ---AVTEAGSKLSQLELeKQQLHRDLEEAKekgEQAEALEKELHRLE 638
Cdd:pfam12128 777 IRTLERKIERIaVRRQEVLRYFDWYQETWLQRRprlATQLSNIERAISEL-QQQLARLIADTK---LRRAKLEMERKASE 852
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 639 KENEQLTKEVTSLKAATEKVEALeHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQ 698
Cdd:pfam12128 853 KQQVRLSENLRGLRCEMSKLATL-KEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKK 911
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1058-1307 |
9.17e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 9.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1058 AALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAK 1137
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1138 EAEHEGLQqqqeqlaAVYEALLQDHKHLGtlyecQSSEYEALIRQHSCLKTLHRNLELEH--KELGERHGDLQQRKAELE 1215
Cdd:COG4942 96 RAELEAQK-------EELAELLRALYRLG-----RQPPLALLLSPEDFLDAVRRLQYLKYlaPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1216 ELEKVLSTEREALEREQKTNAiatSENQRLRGELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSRWQVRFDELK 1295
Cdd:COG4942 164 ALRAELEAERAELEALLAELE---EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
250
....*....|..
gi 47059089 1296 EQHQSMDISLTK 1307
Cdd:COG4942 241 ERTPAAGFAALK 252
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
773-880 |
9.91e-05 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 47.64 E-value: 9.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 773 ESSTHKSQALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDA-- 850
Cdd:PRK11448 138 EDPENLLHALQQEVLTLKQQLELQAREKAQSQ---ALAEAQQQELVALEGLAAELEEKQQELEAQLEQLQEKAAETSQer 214
|
90 100 110
....*....|....*....|....*....|....*..
gi 47059089 851 ------ILDDSAAKLSAAEKESRAL-DKELarcRDVG 880
Cdd:PRK11448 215 kqkrkeITDQAAKRLELSEEETRILiDQQL---RKAG 248
|
|
| TMCO5 |
pfam14992 |
TMCO5 family; The TMCO5 family includes human transmembrane and coiled-coil domain-containing ... |
754-928 |
1.19e-04 |
|
TMCO5 family; The TMCO5 family includes human transmembrane and coiled-coil domain-containing proteins 5A and 5B.
Pssm-ID: 464427 [Multi-domain] Cd Length: 278 Bit Score: 46.25 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 754 LELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKqlegaEEDRKALEQEVAQLEKDKKL 833
Cdd:pfam14992 8 LEKDLQRLDEANQVLLLKIQEKEEEIQSLEREITLTRSLAEDEEREELNFTIMEK-----EDALQELELETAKLEKKNEI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 834 L--------EKEARRLWQQVELK----DAILDDSAAKLSAAEkESRAL-DKELARCRDVGSKLKELEKDNRDLTKQVTMH 900
Cdd:pfam14992 83 LvksvmelqRKLSRKSDKNTGLEqetlKQMLEELKVKLQQSE-ESCADqEKELAKVESDYQSVHQLCEDQALCIKKYQEI 161
|
170 180 190
....*....|....*....|....*....|
gi 47059089 901 TRTLTTLREDLVLEK--LKSQQLSSELDKL 928
Cdd:pfam14992 162 LRKMEEEKETRLLEKevSKAQSNSSQRVKL 191
|
|
| HAP1_N |
pfam04849 |
HAP1 N-terminal conserved region; This family represents an N-terminal conserved region found ... |
498-679 |
1.39e-04 |
|
HAP1 N-terminal conserved region; This family represents an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologs. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntington's disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34.
Pssm-ID: 461455 [Multi-domain] Cd Length: 309 Bit Score: 46.17 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 498 ELEKENQQLSKKIEKLQTQLereKQSNQDLETLSEELIREKEQLQ----SGMEALKADRARQIKDLEQEKGHLHQAVW-- 571
Cdd:pfam04849 91 SLLKQNSVLTERNEALEEQL---GSAREEILQLRHELSKKDDLLQiysnDAEESETESSCSTPLRRNESFSSLHGCVQld 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 572 SLRERpqvnsTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDL-EEAKEKGEQAEALEKELHRLEKENEQLTKEVTS 650
Cdd:pfam04849 168 ALQEK-----LRGLEEENLKLRSEASHLKTETDTYEEKEQQLMSDCvEQLSEANQQMAELSEELARKMEENLRQQEEITS 242
|
170 180
....*....|....*....|....*....
gi 47059089 651 LKAateKVEALEHQSQGLELENRSLRKSL 679
Cdd:pfam04849 243 LLA---QIVDLQHKCKELGIENEELQQHL 268
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
265-582 |
1.41e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 47.04 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 265 RVRQELEEKTEQLADTRHevdqlVLELQKAKQDNIQ-----LAADARSARAYRDELDSLREKAnrvERLEMDLVRCKEKL 339
Cdd:pfam17380 300 RLRQEKEEKAREVERRRK-----LEEAEKARQAEMDrqaaiYAEQERMAMERERELERIRQEE---RKRELERIRQEEIA 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 340 HDVdfykARMEELREDNIILIETKAMLEEQLTASRarsdKVHELEKENlQLKSKLHDLELDRdADKKQIEKLLEEYMVLE 419
Cdd:pfam17380 372 MEI----SRMRELERLQMERQQKNERVRQELEAAR----KVKILEEER-QRKIQQQKVEMEQ-IRAEQEEARQREVRRLE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 420 MAQKQSMKESAHLGWELEQLSKNADLSDASRKsfvfelnecasSRILKLEKENQSlQSTIQGLRDTSLALEESSLKYGEL 499
Cdd:pfam17380 442 EERAREMERVRLEEQERQQQVERLRQQEEERK-----------RKKLELEKEKRD-RKRAEEQRRKILEKELEERKQAMI 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 500 EKENQQ--LSKKIEKLQTQL-EREKQSNQDLETLSEELIREKEQLQSGMEALKADRARqIKDLEQEKGHLHQAVWSLRER 576
Cdd:pfam17380 510 EEERKRklLEKEMEERQKAIyEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSR-LEAMEREREMMRQIVESEKAR 588
|
....*.
gi 47059089 577 PQVNST 582
Cdd:pfam17380 589 AEYEAT 594
|
|
| Filament |
pfam00038 |
Intermediate filament protein; |
731-989 |
1.54e-04 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 46.07 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 731 EREKEELRRdveLLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALqrelsqlEAERQALRRDLETLQLTHKQL 810
Cdd:pfam00038 53 EKEIEDLRR---QLDTLTVERARLQLELDNLRLAAEDFRQKYEDELNLRTSA-------ENDLVGLRKDLDEATLARVDL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 811 EGAEEdrkALEQEVAQLekdKKLLEKEARRLWQQVELKDAILD-DSAAK--LSAAEKESRALDKELARCrdvgsKLKELE 887
Cdd:pfam00038 123 EAKIE---SLKEELAFL---KKNHEEEVRELQAQVSDTQVNVEmDAARKldLTSALAEIRAQYEEIAAK-----NREEAE 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 888 KDNR----DLTKQVTMHTRTLTTLREDLVLEKLKSQQLSSELDklSQELEKVGLSKDLLLQEDDGHGDgkgktesalktt 963
Cdd:pfam00038 192 EWYQskleELQQAAARNGDALRSAKEEITELRRTIQSLEIELQ--SLKKQKASLERQLAETEERYELQ------------ 257
|
250 260
....*....|....*....|....*..
gi 47059089 964 LAMKEEKIVFLEAQVEE-KESLSRQLQ 989
Cdd:pfam00038 258 LADYQELISELEAELQEtRQEMARQLR 284
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
601-801 |
1.87e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 45.30 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 601 SKLSQLELEKQQLHRDLEEAKEkgeQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKsld 680
Cdd:COG1579 17 SELDRLEHRLKELPAELAELED---ELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKE--- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 681 tLQNVSVQLEGLERDKQQLGQENLELrkmveamrftsakMAQIETENRQLEREKEELRrdvELLKTLSKKSERLELsyqs 760
Cdd:COG1579 91 -YEALQKEIESLKRRISDLEDEILEL-------------MERIEELEEELAELEAELA---ELEAELEEKKAELDE---- 149
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 47059089 761 vsaenlqlqhslessthKSQALQRELSQLEAERQALRRDLE 801
Cdd:COG1579 150 -----------------ELAELEAELEELEAEREELAAKIP 173
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
256-637 |
1.89e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 46.39 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 256 LADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKqdniqlaadaRSARAYRDEL-DSLREKANRVERLEMDLVR 334
Cdd:pfam06160 95 LDDIEEDIKQILEELDELLESEEKNREEVEELKDKYRELR----------KTLLANRFSYgPAIDELEKQLAEIEEEFSQ 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 335 CKEKLHDVDFYKARM--EELREDNI-----------ILIETKAMLEEQLTASRARSDK----------------VHELEK 385
Cdd:pfam06160 165 FEELTESGDYLEAREvlEKLEEETDaleelmedippLYEELKTELPDQLEELKEGYREmeeegyalehlnvdkeIQQLEE 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 386 ENLQLKSKLHDLELDRDADK-KQIEKLLEE-YMVLE---MAQKQSMKESAHLGWELEQLSKNAD--LSDASRKSFVFELN 458
Cdd:pfam06160 245 QLEENLALLENLELDEAEEAlEEIEERIDQlYDLLEkevDAKKYVEKNLPEIEDYLEHAEEQNKelKEELERVQQSYTLN 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 459 ECASSRILKLEKENQSLQSTIQGLRDtslALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETlSEELIREK 538
Cdd:pfam06160 325 ENELERVRGLEKQLEELEKRYDEIVE---RLEEKEVAYSELQEELEEILEQLEEIEEEQEEFKESLQSLRK-DELEAREK 400
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 539 -EQLQSGMEALKadraRQIkdleqEKGHLhqavwslrerPQVNST-----KDVEKENRALHQavteagsKLSQLELEKQQ 612
Cdd:pfam06160 401 lDEFKLELREIK----RLV-----EKSNL----------PGLPESyldyfFDVSDEIEDLAD-------ELNEVPLNMDE 454
|
410 420
....*....|....*....|....*
gi 47059089 613 LHRDLEEAKekgEQAEALEKELHRL 637
Cdd:pfam06160 455 VNRLLDEAQ---DDVDTLYEKTEEL 476
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
917-1161 |
1.92e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 917 KSQQLSSELDKLSQELEKvgLSKDLLLQEddghgdgkgKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIK 996
Cdd:COG4942 21 AAAEAEAELEQLQQEIAE--LEKELAALK---------KEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 997 KEHEQLRQTQEggdKAQNALKRppgkvtshQEKEAWEPSHKEATMELLRVKDrAIELERSNAALQAERQLLKEQLQHLEt 1076
Cdd:COG4942 90 KEIAELRAELE---AQKEELAE--------LLRALYRLGRQPPLALLLSPED-FLDAVRRLQYLKYLAPARREQAEELR- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1077 qnvsfsSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYE 1156
Cdd:COG4942 157 ------ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
....*
gi 47059089 1157 ALLQD 1161
Cdd:COG4942 231 RLEAE 235
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
247-560 |
2.02e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.57 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEV--------------DQLVLELQKAKQDNIQLAADARSARAYR 312
Cdd:PRK02224 363 EEAAELESELEEAREAVEDRREEIEELEEEIEELRERFgdapvdlgnaedflEELREERDELREREAELEATLRTARERV 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 313 DE----------------------LDSLREKANRVERLEMDLVRCKEKLHDVDFYKARMEELR--EDNIILIETKAMLEE 368
Cdd:PRK02224 443 EEaealleagkcpecgqpvegsphVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVeaEDRIERLEERREDLE 522
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 369 QLTASR-----ARSDKVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKNA 443
Cdd:PRK02224 523 ELIAERretieEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIA 602
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 444 DLSDA-----SRKSFVFELNECASSRILKLEKENQSLQSTIQGLRDTSL---------ALEESSLKYGELEKENQQLSKK 509
Cdd:PRK02224 603 DAEDEierlrEKREALAELNDERRERLAEKRERKRELEAEFDEARIEEAredkeraeeYLEQVEEKLDELREERDDLQAE 682
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 47059089 510 IEKLQTQLEREKQSNQDLETLSEELIR------EKEQLQSGMEALKAD-RARQIKDLE 560
Cdd:PRK02224 683 IGAVENELEELEELRERREALENRVEAlealydEAEELESMYGDLRAElRQRNVETLE 740
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1045-1266 |
2.04e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 2.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1045 RVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSF--SSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAA 1122
Cdd:COG3206 165 NLELRREEARKALEFLEEQLPELRKELEEAEAALEEFrqKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1123 LSAQyTVLQSQQAAKEAEHEGLQQQQEQLAAVyEALLQDhkhLGTLYECQSSEYEALIRQhscLKTLHRNLElehKELGE 1202
Cdd:COG3206 245 LRAQ-LGSGPDALPELLQSPVIQQLRAQLAEL-EAELAE---LSARYTPNHPDVIALRAQ---IAALRAQLQ---QEAQR 313
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47059089 1203 RHGDLQQRKAELEELEKVLSTEREALEREQKTNAIATSENQRLRGELDRISFLHQQLKGEYEEL 1266
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEA 377
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
591-873 |
2.06e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 46.05 E-value: 2.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 591 ALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEkgeQAEALEKELHRLEKENEQLTKEVT----SLKAATEKVEALEHQSQ 666
Cdd:COG4372 28 ALSEQLRKALFELDKLQEELEQLREELEQARE---ELEQLEEELEQARSELEQLEEELEelneQLQAAQAELAQAQEELE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 667 GLELENRSLRKSLDTLQNvsvQLEGLERDKQQLGQENLELRKMVeamrftSAKMAQIETENRQLEREKEELRRDVELLKT 746
Cdd:COG4372 105 SLQEEAEELQEELEELQK---ERQDLEQQRKQLEAQIAELQSEI------AEREEELKELEEQLESLQEELAALEQELQA 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 747 LSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQ 826
Cdd:COG4372 176 LSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEV 255
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 47059089 827 LEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKEL 873
Cdd:COG4372 256 ILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLL 302
|
|
| Tropomyosin |
pfam00261 |
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 ... |
718-933 |
2.19e-04 |
|
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organization and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterized by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Pssm-ID: 459736 [Multi-domain] Cd Length: 235 Bit Score: 45.02 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 718 AKMAQIETEnrqLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEA---ERQ 794
Cdd:pfam00261 1 KKMQQIKEE---LDEAEERLKEAMKKLEEAEKRAEKAEAEVAALNRRIQLLEEELERTEERLAEALEKLEEAEKaadESE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 795 ALRRDLETlqlthkqlEGAEEDRKALEQEvAQLeKDKKLLEKEARRLWQQVELKDAI----LDDSAAKLSAAEKESRALD 870
Cdd:pfam00261 78 RGRKVLEN--------RALKDEEKMEILE-AQL-KEAKEIAEEADRKYEEVARKLVVvegdLERAEERAELAESKIVELE 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 871 KELA-------------------------RCRDVGSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLSSEL 925
Cdd:pfam00261 148 EELKvvgnnlksleaseekaseredkyeeQIRFLTEKLKEAETRAEFAERSVQKLEKEVDRLEDELEAEKEKYKAISEEL 227
|
....*...
gi 47059089 926 DKLSQELE 933
Cdd:pfam00261 228 DQTLAELN 235
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
294-561 |
2.56e-04 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 46.00 E-value: 2.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 294 AKQDNIQLAADARSARAYRDELDS-----LREKANRVERLEMDLVRCKEKLHdvdfyKARMEELredniiliETKAMLEE 368
Cdd:pfam09726 361 SKNSKKQKGPGGKSGARHKDPAENcipnnQLSKPDALVRLEQDIKKLKAELQ-----ASRQTEQ--------ELRSQISS 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 369 QLTASRARSDKVHELEKENLQLKSKLHDLELDRDADKK---QIEKLL-EEYMVLEMAQKQSMKESAHLGWELEQLSKNAD 444
Cdd:pfam09726 428 LTSLERSLKSELGQLRQENDLLQTKLHNAVSAKQKDKQtvqQLEKRLkAEQEARASAEKQLAEEKKRKKEEEATAARAVA 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 445 LSDASRKsfvfELNECASSRILKLEKENQSLQSTIQGLRDTSLALE---ESSLKYGELEKENQQL-------SKKIEKLQ 514
Cdd:pfam09726 508 LAAASRG----ECTESLKQRKRELESEIKKLTHDIKLKEEQIRELEikvQELRKYKESEKDTEVLmsalsamQDKNQHLE 583
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 47059089 515 TQLEREKQSNQDLETLSEELIREKEQLQSGMEAlkadRARQIKDLEQ 561
Cdd:pfam09726 584 NSLSAETRIKLDLFSALGDAKRQLEIAQGQIYQ----KDQEIKDLKQ 626
|
|
| HAP1_N |
pfam04849 |
HAP1 N-terminal conserved region; This family represents an N-terminal conserved region found ... |
586-790 |
3.00e-04 |
|
HAP1 N-terminal conserved region; This family represents an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologs. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntington's disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34.
Pssm-ID: 461455 [Multi-domain] Cd Length: 309 Bit Score: 45.02 E-value: 3.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 586 EKENRALHQAVTEAGSKLSQLELE---KQQLHRDLEEAKEKGEQAEALEKELHRLEKENEqLTKEVTslkaatekVEALE 662
Cdd:pfam04849 100 TERNEALEEQLGSAREEILQLRHElskKDDLLQIYSNDAEESETESSCSTPLRRNESFSS-LHGCVQ--------LDALQ 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 663 HQSQGLELENRSLRKSLDTLQNVSVQLEGLErdkQQLgqenleLRKMVEAMRFTSAKMAQIETEnrqLEREKEELRRDVE 742
Cdd:pfam04849 171 EKLRGLEEENLKLRSEASHLKTETDTYEEKE---QQL------MSDCVEQLSEANQQMAELSEE---LARKMEENLRQQE 238
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 47059089 743 LLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLE 790
Cdd:pfam04849 239 EITSLLAQIVDLQHKCKELGIENEELQQHLQASKEAQRQLTSELQELQ 286
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
615-1088 |
3.28e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.10 E-value: 3.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 615 RDLEEAKEKGEQAEALEKELHRLEKeneQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLER 694
Cdd:PRK04863 276 RHANERRVHLEEALELRRELYTSRR---QLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIER 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 695 DKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRrdvellKTLSKKSERLElsyqsvsaenlqlqhsles 774
Cdd:PRK04863 353 YQADLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELK------SQLADYQQALD------------------- 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 775 sthksqALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEdrkALEQEVAQLEKdkklLEKEARRLWQQVELKDAILD- 853
Cdd:PRK04863 408 ------VQQTRAIQYQQAVQALERAKQLCGLPDLTADNAED---WLEEFQAKEQE----ATEELLSLEQKLSVAQAAHSq 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 854 -DSAAKL--SAAEKESRALDKELARcrdvgSKLKELEKDnRDLTKQVTMHTRTLTTLREDLVLEKlksqqlssELDKLSQ 930
Cdd:PRK04863 475 fEQAYQLvrKIAGEVSRSEAWDVAR-----ELLRRLREQ-RHLAEQLQQLRMRLSELEQRLRQQQ--------RAERLLA 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 931 ELEKVglskdLLLQEDDghgdgkgktESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGD 1010
Cdd:PRK04863 541 EFCKR-----LGKNLDD---------EDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWL 606
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47059089 1011 KAQNALKRppgkvTSHQEKEAWEPSHK-EATMELLRVKDRAIELERSNaaLQAERQLLKEQLQHLETQNVSFSSQILTL 1088
Cdd:PRK04863 607 AAQDALAR-----LREQSGEEFEDSQDvTEYMQQLLERERELTVERDE--LAARKQALDEEIERLSQPGGSEDPRLNAL 678
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
370-657 |
3.34e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 370 LTASRARSDKVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEeymvlemaqkqsmkesahlgwELEQLSKnadlsdas 449
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLK---------------------QLAALER-------- 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 450 rksfvfelnecassRILKLEKENQSLQSTIQGLRDTslaLEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLET 529
Cdd:COG4942 63 --------------RIAALARRIRALEQELAALEAE---LAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALL 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 530 LSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQ--VNSTKDVEKENRALHQAVTEAGSKLSQLE 607
Cdd:COG4942 126 LSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAelEALLAELEEERAALEALKAERQKLLARLE 205
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 47059089 608 lekQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEK 657
Cdd:COG4942 206 ---KELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALK 252
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
734-891 |
3.78e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.89 E-value: 3.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 734 KEELRRDVELLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQlthKQLEGA 813
Cdd:COG4372 30 SEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQ---EELESL 106
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47059089 814 EEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNR 891
Cdd:COG4372 107 QEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQA 184
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
518-1266 |
4.10e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.71 E-value: 4.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 518 EREKQSNQDLEtLSEELIREKEQLQSGMEALkADRARQIKDLEQEKGHLHQAVWSLRERPQ--VNSTKDVEKENRaLHQA 595
Cdd:COG3096 279 ERRELSERALE-LRRELFGARRQLAEEQYRL-VEMARELEELSARESDLEQDYQAASDHLNlvQTALRQQEKIER-YQED 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 596 VTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKEL-------------------------HRLEKENEQLTKEVTS 650
Cdd:COG3096 356 LEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLksqladyqqaldvqqtraiqyqqavQALEKARALCGLPDLT 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 651 LKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQ----LEGLER-----DKQQLGQENLELRKMVEAMRFTSAKMA 721
Cdd:COG3096 436 PENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQfekaYELVCKiagevERSQAWQTARELLRRYRSQQALAQRLQ 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 722 QIETENRQLEREKEELRRDVELLKTLSKKS-------ERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQ 794
Cdd:COG3096 516 QLRAQLAELEQRLRQQQNAERLLEEFCQRIgqqldaaEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIK 595
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 795 ALRRD----------LETLQ-LTHKQLEGAEEDRKALEQevaQLEKdkkllEKEARRLWQQVELKDAILDDSAAKLSAAe 863
Cdd:COG3096 596 ELAARapawlaaqdaLERLReQSGEALADSQEVTAAMQQ---LLER-----EREATVERDELAARKQALESQIERLSQP- 666
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 864 keSRALDKELARCRDV--GSKLKELEKDnrdltkqVTMH-----TRTLTTLREDLVLEKLKSQQlsSELDKLSQELEkvg 936
Cdd:COG3096 667 --GGAEDPRLLALAERlgGVLLSEIYDD-------VTLEdapyfSALYGPARHAIVVPDLSAVK--EQLAGLEDCPE--- 732
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 937 lskDLLLQEddghGDGKGKTESALKTT---------------------------LAMKEEKIVFLEAQVEEKESLSRQLQ 989
Cdd:COG3096 733 ---DLYLIE----GDPDSFDDSVFDAEeledavvvklsdrqwrysrfpevplfgRAAREKRLEELRAERDELAEQYAKAS 805
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 990 IELQMIKKEHEQLRQTqeggdkaqnalkrppgkVTSHQEkEAWEPShKEATMELLRvkDRAIELERSNAALQAERQLLKE 1069
Cdd:COG3096 806 FDVQKLQRLHQAFSQF-----------------VGGHLA-VAFAPD-PEAELAALR--QRRSELERELAQHRAQEQQLRQ 864
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1070 QLQHLETQnvsfSSQILTLQKQSAFLQEHTTTLQTQTAKLQVEnstlssqnAALSAQYTVLQSQQAAKEAEheglqqqqe 1149
Cdd:COG3096 865 QLDQLKEQ----LQLLNKLLPQANLLADETLADRLEELREELD--------AAQEAQAFIQQHGKALAQLE--------- 923
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1150 QLAAVYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLHRNLE----LEHKELGERHGDLQQR-KAELEELEKVLSTE 1224
Cdd:COG3096 924 PLVAVLQSDPEQFEQLQADYLQAKEQQRRLKQQIFALSEVVQRRPhfsyEDAVGLLGENSDLNEKlRARLEQAEEARREA 1003
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 47059089 1225 REALEREQKTNAIATSENQRLRGELDRISFLHQQLKGEYEEL 1266
Cdd:COG3096 1004 REQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQELEEL 1045
|
|
| DUF4515 |
pfam14988 |
Domain of unknown function (DUF4515); This family of proteins is found in bacteria and ... |
607-805 |
4.31e-04 |
|
Domain of unknown function (DUF4515); This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 198 and 469 amino acids in length. There are two completely conserved L residues that may be functionally important.
Pssm-ID: 405647 [Multi-domain] Cd Length: 206 Bit Score: 43.60 E-value: 4.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 607 ELEKQQLHRDlEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLqnvs 686
Cdd:pfam14988 30 ECEEIERRRQ-ELASRYTQQTAELQTQLLQKEKEQASLKKELQALRPFAKLKESQEREIQDLEEEKEKVRAETAEK---- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 687 vqlegLERDKQQLGQENLELRKMVEAMRFTSAKmaqietenrqlEREKEELRRDVELLKTLSKKSerLELSYQSVSAENL 766
Cdd:pfam14988 105 -----DREAHLQFLKEKALLEKQLQELRILELG-----------ERATRELKRKAQALKLAAKQA--LSEFCRSIKRENR 166
|
170 180 190
....*....|....*....|....*....|....*....
gi 47059089 767 QLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQL 805
Cdd:pfam14988 167 QLQKELLQLIQETQALEAIKSKLENRKQRLKEEQWYLEA 205
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
435-888 |
4.48e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 45.28 E-value: 4.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 435 ELEQLSKNADLSDASRKSFVFELnecasSRILKLEKEnqsLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQ 514
Cdd:PRK01156 160 EINSLERNYDKLKDVIDMLRAEI-----SNIDYLEEK---LKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAM 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 515 TQLEREKQSNQDLETLSEELIREKEQLQS--GMEALKADRARQIKDLEQEKGHL-HQAVWSLRER--PQVNSTKDVEKEN 589
Cdd:PRK01156 232 DDYNNLKSALNELSSLEDMKNRYESEIKTaeSDLSMELEKNNYYKELEERHMKIiNDPVYKNRNYinDYFKYKNDIENKK 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 590 RAlhqavteagskLSQLELEKQQLHrdleEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLE 669
Cdd:PRK01156 312 QI-----------LSNIDAEINKYH----AIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLK 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 670 LENRSLRKSLDTLQN-VSVQLEGLERDKQQLGQENLELRKMVEAMrftSAKMAQIETENRQLEREKEELRRDVELLKTLS 748
Cdd:PRK01156 377 KKIEEYSKNIERMSAfISEILKIQEIDPDAIKKELNEINVKLQDI---SSKVSSLNQRIRALRENLDELSRNMEMLNGQS 453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 749 K-----------KSERLELSYqsvSAENLQLQHSLESSTHKSQALQRELSQLEAERQAL-RRDLETLQLTHKQLEGAEED 816
Cdd:PRK01156 454 VcpvcgttlgeeKSNHIINHY---NEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLeSEEINKSINEYNKIESARAD 530
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47059089 817 RKALEQEVAQLeKDKKLLEKEARRLWQQVELKDaiLDDSAAKLSAAEKESRALDKELARCR--DVGSKLKELEK 888
Cdd:PRK01156 531 LEDIKIKINEL-KDKHDKYEEIKNRYKSLKLED--LDSKRTSWLNALAVISLIDIETNRSRsnEIKKQLNDLES 601
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
469-1086 |
5.61e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 45.20 E-value: 5.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 469 EKENQSLQSTIQGLRDTSLALEE-SSLkygeLEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEA 547
Cdd:pfam10174 66 QEENQHLQLTIQALQDELRAQRDlNQL----LQQDFTTSPVDGEDKFSTPELTEENFRRLQSEHERQAKELFLLRKTLEE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 548 LKAdrarQIKDLEQEKGHLHQAVWSLRERPQVNS-TKDVEKENRALHQAVTEAGSKLSQLELEKQQlhrdleeakeKGEQ 626
Cdd:pfam10174 142 MEL----RIETQKQTLGARDESIKKLLEMLQSKGlPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQ----------KEKE 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 627 AEALEKELHRlekeNEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLqNVSVQLEGLERdkqqlgQENLel 706
Cdd:pfam10174 208 NIHLREELHR----RNQLQPDPAKTKALQTVIEMKDTKISSLERNIRDLEDEVQML-KTNGLLHTEDR------EEEI-- 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 707 rKMVEAMRFTSAKMaqieteNRQLEREKEELRRDVELLKTLSKKSERLElSYQSVSAENLQ-LQHSLESSTHKSQALQRE 785
Cdd:pfam10174 275 -KQMEVYKSHSKFM------KNKIDQLKQELSKKESELLALQTKLETLT-NQNSDCKQHIEvLKESLTAKEQRAAILQTE 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 786 LSqleaerqALRRDLETLQ--LTHKQlegaeedrkaleQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAE 863
Cdd:pfam10174 347 VD-------ALRLRLEEKEsfLNKKT------------KQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQ 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 864 KESRALDKELARCRDvgsKLKELEKDnrdltkqvTMHTRT-LTTLREDL-----VLEKLKSQ------QLSSELDKLSQE 931
Cdd:pfam10174 408 EQLRDKDKQLAGLKE---RVKSLQTD--------SSNTDTaLTTLEEALsekerIIERLKEQreredrERLEELESLKKE 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 932 L----EKVGLSKDLLLQEDDGHGDGKGKTeSALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQE 1007
Cdd:pfam10174 477 NkdlkEKVSALQPELTEKESSLIDLKEHA-SSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTNPE 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1008 GGDKAQNALKrppgKVTSHQEKEAWEPSHKEATMELLR-------VKDRAIELERSNAALQAERQLLK-EQLQHLETQNV 1079
Cdd:pfam10174 556 INDRIRLLEQ----EVARYKEESGKAQAEVERLLGILReveneknDKDKKIAELESLTLRQMKEQNKKvANIKHGQQEMK 631
|
....*..
gi 47059089 1080 SFSSQIL 1086
Cdd:pfam10174 632 KKGAQLL 638
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
484-690 |
5.78e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.44 E-value: 5.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 484 DTSLALEESSLKygELEKENQQLSKKIEKLQTQLErekQSNQDLETLSEELirekEQLQSGMEALKADRARQIKDLEQEK 563
Cdd:COG3883 15 DPQIQAKQKELS--ELQAELEAAQAELDALQAELE---ELNEEYNELQAEL----EALQAEIDKLQAEIAEAEAEIEERR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 564 GHLHQAVWSLRERPQVNSTKDVEKENRALHQAVT--EAGSKLSQLELEK-QQLHRDLEEAKEKGEQAEALEKELHRLEKE 640
Cdd:COG3883 86 EELGERARALYRSGGSVSYLDVLLGSESFSDFLDrlSALSKIADADADLlEELKADKAELEAKKAELEAKLAELEALKAE 165
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 47059089 641 NEQLTKEVTSLKA-ATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLE 690
Cdd:COG3883 166 LEAAKAELEAQQAeQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAA 216
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1193-1379 |
5.83e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 5.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1193 LELEHKELGERHGDLQQRKAELEELEKvlstEREALEREQKtnaiatsenqRLRGELDRISFLHQqlkgeYEELHAHTKE 1272
Cdd:COG4717 76 LEEELKEAEEKEEEYAELQEELEELEE----ELEELEAELE----------ELREELEKLEKLLQ-----LLPLYQELEA 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1273 LKTSLNNSQLELSRWQVRFDELKEQHQSmdisltkmdnhcelLSRLKGNLEEENHHLLSQIQLLSQQNQMLLEQNMESKE 1352
Cdd:COG4717 137 LEAELAELPERLEELEERLEELRELEEE--------------LEELEAELAELQEELEELLEQLSLATEEELQDLAEELE 202
|
170 180
....*....|....*....|....*..
gi 47059089 1353 QYHEEQKQYIDKLNALRRHKEKLEEKI 1379
Cdd:COG4717 203 ELQQRLAELEEELEEAQEELEELEEEL 229
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
615-1037 |
5.85e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.13 E-value: 5.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 615 RDLEEAKEKGEQAEAL-EKELHRLEKENEQLTK-----EVTSLKA-----------ATEKVEALEHQSQGLELENRSLRK 677
Cdd:PTZ00121 1027 EKIEELTEYGNNDDVLkEKDIIDEDIDGNHEGKaeakaHVGQDEGlkpsykdfdfdAKEDNRADEATEEAFGKAEEAKKT 1106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 678 SLDTLQNVSVQLEGLERDKQQLGQEnlELRKMVEAMRFTSAKMAQiETENRQLEREKEELRRDVEllktlSKKSERLELS 757
Cdd:PTZ00121 1107 ETGKAEEARKAEEAKKKAEDARKAE--EARKAEDARKAEEARKAE-DAKRVEIARKAEDARKAEE-----ARKAEDAKKA 1178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 758 YQSVSAENLQLQHSLESSTHKSQAlqRELSQLEAERQAlrrdletlqlthKQLEGAEEDRKAleQEVAQLEKDKKLlEKE 837
Cdd:PTZ00121 1179 EAARKAEEVRKAEELRKAEDARKA--EAARKAEEERKA------------EEARKAEDAKKA--EAVKKAEEAKKD-AEE 1241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 838 ARRLwQQVELKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNrDLTKQVTMHtrtlttlREDLVLEKLK 917
Cdd:PTZ00121 1242 AKKA-EEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKAD-EAKKAEEKK-------KADEAKKKAE 1312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 918 SQQLSSELDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKK 997
Cdd:PTZ00121 1313 EAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKK 1392
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 47059089 998 EHEQLRQTQEGGDKAQNALKRPPGKVTSHQEKEAWEPSHK 1037
Cdd:PTZ00121 1393 ADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKK 1432
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
952-1373 |
5.96e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 44.81 E-value: 5.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 952 GKGKTESALKTTLAMKEeKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEggdkaqnalkrppgkvtshqekea 1031
Cdd:pfam10174 169 SKGLPKKSGEEDWERTR-RIAEAEMQLGHLEVLLDQKEKENIHLREELHRRNQLQP------------------------ 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1032 wEPSHKEATMELLRVKDRAI-ELERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAK-- 1108
Cdd:pfam10174 224 -DPAKTKALQTVIEMKDTKIsSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKke 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1109 -----LQVENSTLSSQNAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEA----LLQDHKHLGTLYECQSSeyeal 1179
Cdd:pfam10174 303 sellaLQTKLETLTNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEkesfLNKKTKQLQDLTEEKST----- 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1180 irQHSCLKTLHRNLELEHKELGERHGDLQQRKAELEELEKVLSTEREALEREQKTN-----AIATSEN---------QRL 1245
Cdd:pfam10174 378 --LAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSsntdtALTTLEEalsekeriiERL 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1246 RGELDRisfLHQQLKGEYEELHAHTKELKTSLNNSQLELSRWQVRFDELKEQHQSMDISLTKMDNHcelLSRLKGNLEEE 1325
Cdd:pfam10174 456 KEQRER---EDRERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSK---LKSLEIAVEQK 529
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 47059089 1326 NHhllsqiQLLSQQNQMLLEQNMESKEQYHEEQKQYIDKL-NALRRHKE 1373
Cdd:pfam10174 530 KE------ECSKLENQLKKAHNAEEAVRTNPEINDRIRLLeQEVARYKE 572
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
258-548 |
6.10e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 6.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 258 DTKARLRRVRQELeektEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAYRDELDSLREKANRVERLEmdlvrcke 337
Cdd:COG4913 607 DNRAKLAALEAEL----AELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELE-------- 674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 338 klhdvdfykARMEELREDNIILietkAMLEEQLTASRARSDkvhELEKENLQLKSKLHDLELDRDADKKQIEKLLEEymv 417
Cdd:COG4913 675 ---------AELERLDASSDDL----AALEEQLEELEAELE---ELEEELDELKGEIGRLEKELEQAEEELDELQDR--- 735
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 418 lemAQKQSMKESAHLGWELEQLSKNADLsDASRKSFVFELN---ECASSRILKLEKE--------NQSLQSTIQGLRDTS 486
Cdd:COG4913 736 ---LEAAEDLARLELRALLEERFAAALG-DAVERELRENLEeriDALRARLNRAEEEleramrafNREWPAETADLDADL 811
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47059089 487 LALEESSLKYGELEKENqqLSKKIEKLQTQLERekQSNQDLETLSEELIREKEQLQSGMEAL 548
Cdd:COG4913 812 ESLPEYLALLDRLEEDG--LPEYEERFKELLNE--NSIEFVADLLSKLRRAIREIKERIDPL 869
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
504-680 |
6.73e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 6.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 504 QQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHqavwslRERPQVNSTK 583
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIK------KYEEQLGNVR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 584 DvEKENRALHQAVTEAGSKLSQLElekqqlhrdlEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAA-TEKVEALE 662
Cdd:COG1579 87 N-NKEYEALQKEIESLKRRISDLE----------DEILELMERIEELEEELAELEAELAELEAELEEKKAElDEELAELE 155
|
170
....*....|....*...
gi 47059089 663 HQSQGLELENRSLRKSLD 680
Cdd:COG1579 156 AELEELEAEREELAAKIP 173
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
584-746 |
6.85e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 6.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 584 DVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKekgEQAEALEKELHRLEKENEQLTKEVTSLKAATEKV----- 658
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAK---TELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVrnnke 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 659 -EALEHQSQGLELENRSLRkslDTLQNVSVQLEGLERDKQQLGQENLELRKMVEamrftsAKMAQIETENRQLEREKEEL 737
Cdd:COG1579 91 yEALQKEIESLKRRISDLE---DEILELMERIEELEEELAELEAELAELEAELE------EKKAELDEELAELEAELEEL 161
|
....*....
gi 47059089 738 RRDVELLKT 746
Cdd:COG1579 162 EAEREELAA 170
|
|
| TMCO5 |
pfam14992 |
TMCO5 family; The TMCO5 family includes human transmembrane and coiled-coil domain-containing ... |
499-708 |
7.13e-04 |
|
TMCO5 family; The TMCO5 family includes human transmembrane and coiled-coil domain-containing proteins 5A and 5B.
Pssm-ID: 464427 [Multi-domain] Cd Length: 278 Bit Score: 43.55 E-value: 7.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 499 LEKENQQLSKKIEKLQTQLEREKQSNQDLE-----TLSEELIREKEQL-QSGMEalkadRARQIKDLEQEkghlhqavws 572
Cdd:pfam14992 8 LEKDLQRLDEANQVLLLKIQEKEEEIQSLEreitlTRSLAEDEEREELnFTIME-----KEDALQELELE---------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 573 lrerpqvnsTKDVEKENRALHQAVTEAGSKLS-----QLELEKQQLHRDLEEAKEKGEQAEAL----EKELHRLEKENE- 642
Cdd:pfam14992 73 ---------TAKLEKKNEILVKSVMELQRKLSrksdkNTGLEQETLKQMLEELKVKLQQSEEScadqEKELAKVESDYQs 143
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47059089 643 --QLTKE-VTSLKAATEKVEALEHqsqglELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRK 708
Cdd:pfam14992 144 vhQLCEDqALCIKKYQEILRKMEE-----EKETRLLEKEVSKAQSNSSQRVKLVETIQQNMEKTIIKKQ 207
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1447-1870 |
7.27e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 44.68 E-value: 7.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1447 ENPDNPPSGPNCVEERDTHNGP--------------------VGKGPGDLKPKRGSPRGGSVDRTDTSTDPAVKSWPSEP 1506
Cdd:PTZ00449 515 EASGLPPKAPGDKEGEEGEHEDskesdepkeggkpgetkegeVGKKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEEP 594
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1507 GSrtfSTSATTAALSSSTPIPKHLGRTKGCNSDDNLCEPSSePDGPYHRQQASRPNSLESSRNASSNSSPLSLK------ 1580
Cdd:PTZ00449 595 KK---PKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKS-PKRPPPPQRPSSPERPEGPKIIKSPKPPKSPKppfdpk 670
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1581 -------GSSDHLHSRCESFSSADLIPSRDPATLSRDGNTSGRGLLGRHEYPPPRngPVSQEtiqkkgaaSTHTGVR-PH 1652
Cdd:PTZ00449 671 fkekfydDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKL--PRDEE--------FPFEPIGdPD 740
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1653 SASPS-SEMVTLEEflEESNRGGSPTHDTPScrDDLLSDYFrKAHDPPALGGQPGPPARKdgAKMPTSF------VAPTI 1725
Cdd:PTZ00449 741 AEQPDdIEFFTPPE--EERTFFHETPADTPL--PDILAEEF-KEEDIHAETGEPDEAMKR--PDSPSEHedkppgDHPSL 813
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1726 KMSINTSEGqqlkpghyvkpnLRPSEAEaLAGMPSRQVQPPQslslGRPrqttmtqnchMPVSRSASLSrafSLASADLL 1805
Cdd:PTZ00449 814 PKKRHRLDG------------LALSTTD-LESDAGRIAKDAS----GKI----------VKLKRSKSFD---DLTTVEEA 863
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47059089 1806 RASGPEACRPESPQkpgghEAAGARETSTHSLQGSHIL-ARERTPIVGKADSPSPGQGTRGRPLDT 1870
Cdd:PTZ00449 864 EEMGAEARKIVVDD-----DGTEADDEDTHPPEEKHKSeVRRRRPPKKPSKPKKPSKPKKPKKPDS 924
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
250-328 |
8.58e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 8.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 250 QHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSAR-AYRDELDSLREKANRVERL 328
Cdd:COG4942 149 REQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELaELAAELAELQQEAEELEAL 228
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
516-796 |
8.76e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 44.51 E-value: 8.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 516 QLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQ---EKGHLHQAVWSLRerpqvnsTKDVEKENRAL 592
Cdd:PLN02939 115 QQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKiltEKEALQGKINILE-------MRLSETDARIK 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 593 HQAVTEAGSKLSQLELEKQQlHRDLEEAKEKGEQAEALEKELHRLEKEN-------EQLTKEVTSLKAATEKVEALEHQS 665
Cdd:PLN02939 188 LAAQEKIHVEILEEQLEKLR-NELLIRGATEGLCVHSLSKELDVLKEENmllkddiQFLKAELIEVAETEERVFKLEKER 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 666 QGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELrkMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLK 745
Cdd:PLN02939 267 SLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQD--LLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEAN 344
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 746 TLSKKSERLELSYQSVSAENLQLQHS-------LESSTHKSQALQRELSQL--EAERQAL 796
Cdd:PLN02939 345 VSKFSSYKVELLQQKLKLLEERLQASdheihsyIQLYQESIKEFQDTLSKLkeESKKRSL 404
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1089-1382 |
1.06e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1089 QKQSAFLQEHTTTLQTQ-----TAKLQVENSTLSSQNAALSAQYTVLQSQQAAKEAEHEglqqqQEQLAAVYEALLQDHK 1163
Cdd:pfam17380 239 RKESFNLAEDVTTMTPEytvryNGQTMTENEFLNQLLHIVQHQKAVSERQQQEKFEKME-----QERLRQEKEEKAREVE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1164 HLGTLYECQSSEYEALIRQHSCLK-----TLHRNLELEHKELGERHGDLQQ-RKAELE-ELEKVLSTEREALEREQKtna 1236
Cdd:pfam17380 314 RRRKLEEAEKARQAEMDRQAAIYAeqermAMERERELERIRQEERKRELERiRQEEIAmEISRMRELERLQMERQQK--- 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1237 iatseNQRLRGELD---RISFLHQQLKGEYEELHAHTKELKTSLNNS-QLELSRWQ---------VRFDELKEQHQsmdi 1303
Cdd:pfam17380 391 -----NERVRQELEaarKVKILEEERQRKIQQQKVEMEQIRAEQEEArQREVRRLEeeraremerVRLEEQERQQQ---- 461
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47059089 1304 sLTKMDNHCELLSRLKGNLEEENHhllsQIQLLSQQNQMLLEQNMESKEQYHEEQKQyidklnalrrhKEKLEEKIMDQ 1382
Cdd:pfam17380 462 -VERLRQQEEERKRKKLELEKEKR----DRKRAEEQRRKILEKELEERKQAMIEEER-----------KRKLLEKEMEE 524
|
|
| CCDC144C |
pfam14915 |
CCDC144C protein coiled-coil region; This family includes the human protein CCDC144C and the ... |
467-684 |
1.06e-03 |
|
CCDC144C protein coiled-coil region; This family includes the human protein CCDC144C and the ankyrin repeat domain-containing protein 26-like 1 found in eukaryotes. Its function remains unknown, however, it is known to contain a coiled-coil domain which corresponds to this region. The ankyrin repeat which features in this protein is a common amino acid motif.
Pssm-ID: 464371 [Multi-domain] Cd Length: 304 Bit Score: 43.44 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 467 KLEKENQSLQSTIQGLRDTsLALEESSLKYGELEKENQQLSKKIE--KLQTQLEREKQSnqdletlseelireKEQLQSG 544
Cdd:pfam14915 28 KYLEDIEILKEKNDDLQKT-LKLNEETLTKTVFQYNGQLNVLKAEntMLNSKLENEKQN--------------KERLETE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 545 MEALKADRARQIKDLEQ-EKGHLHQAVWSLRERPQVNSTKD--------VEKENRALHQAVTEAGSKLSQLELEkqqLHR 615
Cdd:pfam14915 93 VESYRSRLAAAIQDHEQsQTSKRDLELAFQRERDEWLRLQDkmnfdvsnLRDENEILSQQLSKAESKANSLENE---LHR 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 616 DLEEAKEKG----------EQAEALEKEL-HRLEKENEQLTKevtslkaATEKVEALEHQSQGLELENRSLRKSLDTLQN 684
Cdd:pfam14915 170 TRDALREKTlllesvqrdlSQAQCQKKELeHMYQNEQDKVNK-------YIGKQESLEERLAQLQSENMLLRQQLEDAQN 242
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
247-519 |
1.08e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.28 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEqLADTRHEVDQL--------VLELQKAKQDNIQLAADARSARAYRDELDSL 318
Cdd:PRK03918 466 KELKEIEEKERKLRKELRELEKVLKKESE-LIKLKELAEQLkeleeklkKYNLEELEKKAEEYEKLKEKLIKLKGEIKSL 544
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 319 REKANRVERLEMDLVRCKEKLHDVDfykarmEELREDNIILIETKAMLEEQLtasrarSDKVHELE---KENLQLKSKLH 395
Cdd:PRK03918 545 KKELEKLEELKKKLAELEKKLDELE------EELAELLKELEELGFESVEEL------EERLKELEpfyNEYLELKDAEK 612
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 396 DLEldrdADKKQIEKLLEEymvLEMAQKQSMKESAhlgwELEQLSKNAdlsDASRKSFVFELNECASSRILKLEKENQSL 475
Cdd:PRK03918 613 ELE----REEKELKKLEEE---LDKAFEELAETEK----RLEELRKEL---EELEKKYSEEEYEELREEYLELSRELAGL 678
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 47059089 476 QSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLER 519
Cdd:PRK03918 679 RAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALER 722
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
467-712 |
1.09e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.74 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 467 KLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLEtlseeliREKEQLQSGME 546
Cdd:COG4372 67 ELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLE-------QQRKQLEAQIA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 547 ALKADRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQ 626
Cdd:COG4372 140 ELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEE 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 627 AEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLEL 706
Cdd:COG4372 220 LLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLA 299
|
....*.
gi 47059089 707 RKMVEA 712
Cdd:COG4372 300 LLLNLA 305
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
313-830 |
1.14e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 44.27 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 313 DELDSLREKA-NRVERLEMDLVRCkEKLHDVDFYKARMEEL--REDNIIL-IETKAMLEEQLTA-----SRARSDK--VH 381
Cdd:TIGR01612 1132 KALEEIKKKSeNYIDEIKAQINDL-EDVADKAISNDDPEEIekKIENIVTkIDKKKNIYDEIKKllneiAEIEKDKtsLE 1210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 382 ELEKENLQLKSKLHDLELDR-DADKKQIE---KLLEEYMV-LEMAQKQSMKESAHLGWELEQ------------------ 438
Cdd:TIGR01612 1211 EVKGINLSYGKNLGKLFLEKiDEEKKKSEhmiKAMEAYIEdLDEIKEKSPEIENEMGIEMDIkaemetfnishdddkdhh 1290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 439 -LSKNAD--LSDASRKSFVFELNECASSRILKLEKENQSLQSTIQGLR-DTSLALEESSLKYGELEKEN-QQLSKKIEKL 513
Cdd:TIGR01612 1291 iISKKHDenISDIREKSLKIIEDFSEESDINDIKKELQKNLLDAQKHNsDINLYLNEIANIYNILKLNKiKKIIDEVKEY 1370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 514 QTQLEREKQSNQDLETLSEELIRE----------KEQLQSGMEALKADRArqIKDLEQEKGHLhqavwsLRERPQVNS-- 581
Cdd:TIGR01612 1371 TKEIEENNKNIKDELDKSEKLIKKikddinleecKSKIESTLDDKDIDEC--IKKIKELKNHI------LSEESNIDTyf 1442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 582 -TKDVEKENRALHQAVTEAGSKLSQ--LELEKQQLHRD----LEEAKEKGEQAEALEKELhrlEKENEQLTKEVTSLKAA 654
Cdd:TIGR01612 1443 kNADENNENVLLLFKNIEMADNKSQhiLKIKKDNATNDhdfnINELKEHIDKSKGCKDEA---DKNAKAIEKNKELFEQY 1519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 655 TEKVEALEHQSQGLELENRslrksldtlqnvsvqLEGLERDKQQLGQENLELRKMVEAMRFTS-AKMAQIETENRQLERE 733
Cdd:TIGR01612 1520 KKDVTELLNKYSALAIKNK---------------FAKTKKDSEIIIKEIKDAHKKFILEAEKSeQKIKEIKKEKFRIEDD 1584
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 734 KEELRRDVELLKTLSKKSERLELSYQSVS------AENLQLQHSLES--STHKSQALQRELSQLEAERQALRRDLETLQL 805
Cdd:TIGR01612 1585 AAKNDKSNKAAIDIQLSLENFENKFLKISdikkkiNDCLKETESIEKkiSSFSIDSQDTELKENGDNLNSLQEFLESLKD 1664
|
570 580
....*....|....*....|....*
gi 47059089 806 THKQLEGAEEDRKALEQEVAQLEKD 830
Cdd:TIGR01612 1665 QKKNIEDKKKELDELDSEIEKIEID 1689
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
618-868 |
1.33e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 618 EEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKaatEKVEALEHQSQGLELENRSLRKSLDTLQNvsvQLEGLERDKQ 697
Cdd:COG3883 23 KELSELQAELEAAQAELDALQAELEELNEEYNELQ---AELEALQAEIDKLQAEIAEAEAEIEERRE---ELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 698 QLGQENLELRKMVEAMRFTSAkMAQIETENRQLEREKEELRRDVELLKTLSKKSERLElsyqsvsaenlqlqhslesstH 777
Cdd:COG3883 97 RSGGSVSYLDVLLGSESFSDF-LDRLSALSKIADADADLLEELKADKAELEAKKAELE---------------------A 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 778 KSQALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAA 857
Cdd:COG3883 155 KLAELEALKAELEAAKAELEAQQAEQE---ALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAA 231
|
250
....*....|.
gi 47059089 858 KLSAAEKESRA 868
Cdd:COG3883 232 AAAAAAAAAAA 242
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
255-533 |
1.36e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 42.98 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 255 ELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAAdarSARAYRDELDSLREKANRVERLEMDLVR 334
Cdd:COG1340 37 ELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKELKEERDELNE---KLNELREELDELRKELAELNKAGGSIDK 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 335 CKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLtasrARSDKVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEE 414
Cdd:COG1340 114 LRKEIERLEWRQQTEVLSPEEEKELVEKIKELEKEL----EKAKKALEKNEKLKELRAELKELRKEAEEIHKKIKELAEE 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 415 YMVLemaqKQSMKEsahLGWELEQLSKNADLSDASRKSFVFELNECaSSRILKLEKENQSLQSTIQGLRDTSLALEEssl 494
Cdd:COG1340 190 AQEL----HEEMIE---LYKEADELRKEADELHKEIVEAQEKADEL-HEEIIELQKELRELRKELKKLRKKQRALKR--- 258
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 47059089 495 kygelEKENQQLSKKIEKLQTQLER-EKQSNQDLETLSEE 533
Cdd:COG1340 259 -----EKEKEELEEKAEEIFEKLKKgEKLTTEELKLLQKS 293
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
813-1015 |
1.47e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 813 AEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRALDKELARCR-DVGSKLKELEKDNR 891
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEaEIEERREELGERAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 892 DLTKQ--------VTMHTRTLTTLREDL-VLEKLKSQQlSSELDKLSQELEKVGLSKDLLLQEddghgdgkgktESALKT 962
Cdd:COG3883 94 ALYRSggsvsyldVLLGSESFSDFLDRLsALSKIADAD-ADLLEELKADKAELEAKKAELEAK-----------LAELEA 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 47059089 963 TLAMKEEKIVFLEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNA 1015
Cdd:COG3883 162 LKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| PHA01351 |
PHA01351 |
putative minor structural protein |
604-941 |
1.52e-03 |
|
putative minor structural protein
Pssm-ID: 107029 Cd Length: 1070 Bit Score: 43.78 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 604 SQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVtslkaatekveaLEHQSQGLELENrSLRKSLDTLQ 683
Cdd:PHA01351 475 SQLIQTNQLLLRQLQQIVSLGIFDQKKIKEELKANKFNEQVALQI------------LESELQFAQLQN-QLKEYQFKLN 541
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 684 NVSVQLEGLERDKQQLGqenlelrkmveamrFTSAKMAQIETENRQLEREKEELRRDVELLKT--LSKKSER-------L 754
Cdd:PHA01351 542 NFLISPQDLEKDLKHLG--------------FDSAIISALIYENQVEQLIKFQLNNIESLAKKgyLSLDEIKkqfkaigI 607
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 755 ELSY--QSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLE------------TLQLTHKQLEGAEE----- 815
Cdd:PHA01351 608 IKEYedAFINFYNQELQISAFLTILKSQLRQFQIDPKEAETELKKLNINeylanqiiqeeyNINIAKLQLSVLETiaktl 687
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 816 --DRKALEQEVAQLEKDKKLLEKEARRLWqQVELKDAIlddSAAKLSAAEKesraldkelarcrDVGSKLKELEKDNRDL 893
Cdd:PHA01351 688 yyDQQQLSGELKKIHKDKTALELYITKFY-YEYIYPKI---SNYHLQLARH-------------GILSDISKLPKEVNDY 750
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 47059089 894 TKQVTMHTRTlTTLREDLVLEKLKSqqLSSELDKLSQELEKVGLSKDL 941
Cdd:PHA01351 751 EYKPAVLTYQ-TTLEIEYIKESLKD--LEIKPKTAINELEKLGMQKDI 795
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
683-932 |
1.53e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 43.74 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 683 QNVSVQLEGLERDKQQLGQENLELRKMVEA--------MRFTSAKMAQIETENRQLeREKEELRRDVELLKT-LSKKSER 753
Cdd:PLN02939 107 AIAAIDNEQQTNSKDGEQLSDFQLEDLVGMiqnaekniLLLNQARLQALEDLEKIL-TEKEALQGKINILEMrLSETDAR 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 754 LELSYQSVS--------AENLQLQHSLESSTHKS--QALQRELSQLEAERQALRRDLETL-------QLTHKQLEGAEED 816
Cdd:PLN02939 186 IKLAAQEKIhveileeqLEKLRNELLIRGATEGLcvHSLSKELDVLKEENMLLKDDIQFLkaelievAETEERVFKLEKE 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 817 RKALEQEVAQLEKD--------KKLLEKEARRLWQQVELKDAILDDSAAKlsaAEKESRALDKElarcRDVGSKLKELEK 888
Cdd:PLN02939 266 RSLLDASLRELESKfivaqedvSKLSPLQYDCWWEKVENLQDLLDRATNQ---VEKAALVLDQN----QDLRDKVDKLEA 338
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 47059089 889 DNRDltkqvtMHTRTLTTLREDLVLEKLKSqqLSSELDKLSQEL 932
Cdd:PLN02939 339 SLKE------ANVSKFSSYKVELLQQKLKL--LEERLQASDHEI 374
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
820-1377 |
1.78e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.19 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 820 LEQEVAQLEKDKKLLEKEARRlwQQVELkdailddsaakLSAAEKESRALDKELARCRDVGSKLKELEKdnRDLTKQvtm 899
Cdd:pfam05557 7 SKARLSQLQNEKKQMELEHKR--ARIEL-----------EKKASALKRQLDRESDRNQELQKRIRLLEK--REAEAE--- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 900 htrtlTTLREDLVLEKLKSQQLSSELDKLSQELEKVGLSKDLLLQeddghgdgKGKTESALKTTLAMKEEKivfLEAQVE 979
Cdd:pfam05557 69 -----EALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISC--------LKNELSELRRQIQRAELE---LQSTNS 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 980 EKESLSRQLQiELQMIKKEHEQLRQTQEggdkaqnalkrppgkvTSHQEKEAWEPSHKEATMELLRVKDRAIELERSNAA 1059
Cdd:pfam05557 133 ELEELQERLD-LLKAKASEAEQLRQNLE----------------KQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKSE 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1060 LQAERQLLKEqLQHLETQNVSFSSQI---LTLQKQSAFLQ---EHTTTLQTQTAKLQVENSTLSSQnaalsaqytvLQSQ 1133
Cdd:pfam05557 196 LARIPELEKE-LERLREHNKHLNENIenkLLLKEEVEDLKrklEREEKYREEAATLELEKEKLEQE----------LQSW 264
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1134 QaaKEAEHEGLQQQQ-EQLAAVYEALLQDHKhlgtlyecqsseyeALIRQHSCLKTLHRNLELEHKELGErhgDLQQRKA 1212
Cdd:pfam05557 265 V--KLAQDTGLNLRSpEDLSRRIEQLQQREI--------------VLKEENSSLTSSARQLEKARRELEQ---ELAQYLK 325
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1213 ELEELEKVLSTEREALEREQKTNAIATSENQRLRGELDR------ISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSR 1286
Cdd:pfam05557 326 KIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILESydkeltMSNYSPQLLERIEEAEDMTQKMQAHNEEMEAQLSV 405
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1287 WQVRFDELKEQHQSMDISLTKM---DNHCELLSRLKG--NLEEENHHLLSQIQLLSQQNQML------------------ 1343
Cdd:pfam05557 406 AEEELGGYKQQAQTLERELQALrqqESLADPSYSKEEvdSLRRKLETLELERQRLREQKNELemelerrclqgdydpkkt 485
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 47059089 1344 ----LEQN--MESKEQYHEEQKQYIDKLNALRRHKEKLEE 1377
Cdd:pfam05557 486 kvlhLSMNpaAEAYQQRKNQLEKLQAEIERLKRLLKKLED 525
|
|
| CCCAP |
pfam15964 |
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in ... |
556-945 |
1.99e-03 |
|
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in eukaryotes. CCCAP is also known as SDCCAG8, serologically defined colon cancer antigen 8. It is associated with the centrosome.
Pssm-ID: 435040 [Multi-domain] Cd Length: 703 Bit Score: 43.36 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 556 IKDLEQEKGHLHQAVWSLRErpqvnSTKDVEKENRALHQAVTEAGSKLSQLELEK-------QQLHRDLEEAKEKGEQAE 628
Cdd:pfam15964 302 IERLTKERDDLMSALVSVRS-----SLAEAQQRESSAYEQVKQAVQMTEEANFEKtkaliqcEQLKSELERQKERLEKEL 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 629 ALEKELHRLEKE--NEQLTKEVTSLKAA----TEKVEALEHQSQGLELENRSLRKSLDTLQNvsvqleglerdkqQLGQE 702
Cdd:pfam15964 377 ASQQEKRAQEKEalRKEMKKEREELGATmlalSQNVAQLEAQVEKVTREKNSLVSQLEEAQK-------------QLASQ 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 703 NLELRKMVEAMRF--TSAKMAQIETE----------NRQLEREKEELRRdveLLKTLSKKSERLELSYQSVS---AENLQ 767
Cdd:pfam15964 444 EMDVTKVCGEMRYqlNQTKMKKDEAEkehreyrtktGRQLEIKDQEIEK---LGLELSESKQRLEQAQQDAArarEECLK 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 768 L-------QHSLESSTHKSQALQRELSQlEAERQALRRDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARR 840
Cdd:pfam15964 521 LtellgesEHQLHLTRLEKESIQQSFSN-EAKAQALQAQQREQELTQKMQQMEAQHDKTVNEQYSLLTSQNTFIAKLKEE 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 841 LWQQVELKDAILDDSAAKLSAAEKESRALDkelarcrdvgSKLKELEKDNRDLTKQVTMHTRTLTTLREDLvleklksQQ 920
Cdd:pfam15964 600 CCTLAKKLEEITQKSRSEVEQLSQEKEYLQ----------DRLEKLQKRNEELEEQCVQHGRMHERMKQRL-------RQ 662
|
410 420
....*....|....*....|....*
gi 47059089 921 LSSELDKLSQELEKVGLSKDLLLQE 945
Cdd:pfam15964 663 LDKHCQATAQQLVQLLSKQNQLFKE 687
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
814-1140 |
2.06e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.19 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 814 EEDRKALEQEVAQLEKDKKLLEKEARRLWQQVE-LKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKlKELEKDNRD 892
Cdd:pfam17380 290 QEKFEKMEQERLRQEKEEKAREVERRRKLEEAEkARQAEMDRQAAIYAEQERMAMERERELERIRQEERK-RELERIRQE 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 893 ltkQVTMHtrtLTTLREdlvLEKLKSQQLSSElDKLSQELEKVGLSKDLLLQEDDGHGDGKGKTESALKTTLAMKEEKIV 972
Cdd:pfam17380 369 ---EIAME---ISRMRE---LERLQMERQQKN-ERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVR 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 973 FLEaqvEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRppgkvTSHQEKEAWEPSHKEATMELLRVKDRAIE 1052
Cdd:pfam17380 439 RLE---EERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEK-----EKRDRKRAEEQRRKILEKELEERKQAMIE 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1053 LERsnaalqaERQLLKEQLQhlETQNVSFSSQ---ILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQNAALSAQYTV 1129
Cdd:pfam17380 511 EER-------KRKLLEKEME--ERQKAIYEEErrrEAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQI 581
|
330
....*....|.
gi 47059089 1130 LQSQQAAKEAE 1140
Cdd:pfam17380 582 VESEKARAEYE 592
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1177-1381 |
2.09e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.19 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1177 EALIRQHSCLKTLHRNLELEHKELGERHGDLQQRKAELEELEKVLSTEREALEREQKTNAIATSENQRLRGELDRISFLH 1256
Cdd:pfam05557 27 RARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEKESQLADAREVI 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1257 QQLKGEyeelhahTKELKTSLNNSQLELSRWQVRFDELKEQHQSMDISLTKMDNHCELLSRLKGNLEEENHHLLSQIQLL 1336
Cdd:pfam05557 107 SCLKNE-------LSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQRIKELEFEI 179
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 47059089 1337 SQQNQMLLE-QNMESK-------EQYHEEQKQYIDKLNALRRHKEKLEEKIMD 1381
Cdd:pfam05557 180 QSQEQDSEIvKNSKSElaripelEKELERLREHNKHLNENIENKLLLKEEVED 232
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
974-1277 |
2.11e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.96 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 974 LEAQVEEKESLSRQLQIELQMIKKEHEQLRQTQEGGDKAQNALKRPPGKVTSHQE------KEAWEPSHK------EATM 1041
Cdd:pfam07888 71 WERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAaheariRELEEDIKTltqrvlERET 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1042 ELLRVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTL---SS 1118
Cdd:pfam07888 151 ELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAhrkEA 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1119 QNAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAA--------VYEALLQDHKHLGTLYECQSSEYEALIRQHSCLKTLH 1190
Cdd:pfam07888 231 ENEALLEELRSLQERLNASERKVEGLGEELSSMAAqrdrtqaeLHQARLQAAQLTLQLADASLALREGRARWAQERETLQ 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1191 RNLELEHKELGERHGDLQQRKAELEELEkvlsTEREALE----REQKTNAIATSENQR----LRGELDRISFLHQQLKGE 1262
Cdd:pfam07888 311 QSAEADKDRIEKLSAELQRLEERLQEER----MEREKLEvelgREKDCNRVQLSESRRelqeLKASLRVAQKEKEQLQAE 386
|
330
....*....|....*
gi 47059089 1263 YEELHAHTKELKTSL 1277
Cdd:pfam07888 387 KQELLEYIRQLEQRL 401
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
798-1378 |
2.27e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 43.24 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 798 RDLETLQLTHKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSA---AKLSAAEKESRALDKELA 874
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEemrARLAARKQELEEILHELE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 875 rcrdvgSKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLssELDKLSQELEKVGLSKDLLLQEDDGHGDGKG 954
Cdd:pfam01576 82 ------SRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKL--QLEKVTTEAKIKKLEEDILLLEDQNSKLSKE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 955 KTE-----SALKTTLAMKEEKIVFLEAQVEEKESLSRQLQIELqmiKKEhEQLRQTQEggdkaqNALKRPPGKVTSHQEK 1029
Cdd:pfam01576 154 RKLleeriSEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERL---KKE-EKGRQELE------KAKRKLEGESTDLQEQ 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1030 EAwepshkeatmellRVKDRAIELERSNAALQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKL 1109
Cdd:pfam01576 224 IA-------------ELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKA 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1110 QVENSTLSSQNAALSAQY-------TVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQD--HKHLGTLYECQsSEYEALI 1180
Cdd:pfam01576 291 EKQRRDLGEELEALKTELedtldttAAQQELRSKREQEVTELKKALEEETRSHEAQLQEmrQKHTQALEELT-EQLEQAK 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1181 RQHSCLKTLHRNLELEHKELGERHGDLQQRKAELEELEKVLS------------TEREALEREQKTnaiatsenQRLRGE 1248
Cdd:pfam01576 370 RNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEgqlqelqarlseSERQRAELAEKL--------SKLQSE 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1249 LDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSrwqvrfdelKEQHQSMDISlTKMDNHCELLSRLKGNLEEE--- 1325
Cdd:pfam01576 442 LESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQ---------EETRQKLNLS-TRLRQLEDERNSLQEQLEEEeea 511
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 47059089 1326 NHHLLSQIQLLSQQNQML---LEQNMESKEQYHEEQKQYIDKLNALRrhkEKLEEK 1378
Cdd:pfam01576 512 KRNVERQLSTLQAQLSDMkkkLEEDAGTLEALEEGKKRLQRELEALT---QQLEEK 564
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
503-935 |
2.36e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 42.90 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 503 NQQLSKkIEKL------QTQLEREKQSNQDLETLS----EELIREKEQLQSGMEALKAdrARQIKDLEQEKGHLHQAVWS 572
Cdd:PRK04778 47 NDELEK-VKKLnltgqsEEKFEEWRQKWDEIVTNSlpdiEEQLFEAEELNDKFRFRKA--KHEINEIESLLDLIEEDIEQ 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 573 LRErpQVNSTKDVEKENRALHQavteagsklsQLELEKQQLHRDLEEAKEK-GEQAEALEKELHRLEKENEQLTKEVTS- 650
Cdd:PRK04778 124 ILE--ELQELLESEEKNREEVE----------QLKDLYRELRKSLLANRFSfGPALDELEKQLENLEEEFSQFVELTESg 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 651 --LKAAtEKVEALEHQSQGLELENRSLRKSLDTLQNV-SVQLEGLERDKQQLGQEN---------LELRKMVEAMRFTSA 718
Cdd:PRK04778 192 dyVEAR-EILDQLEEELAALEQIMEEIPELLKELQTElPDQLQELKAGYRELVEEGyhldhldieKEIQDLKEQIDENLA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 719 KMAQI-----ETENRQLEREKEEL----RRDVELLKTLSKKSERLELsyqsvsaenlQLQHSLESSTHksqaLQRELSQL 789
Cdd:PRK04778 271 LLEELdldeaEEKNEEIQERIDQLydilEREVKARKYVEKNSDTLPD----------FLEHAKEQNKE----LKEEIDRV 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 790 EaerqalrrdlETLQLTHKQLEgaeeDRKALEQEVAQLEKDKKLLEKEARRlwQQV---ELKDaILDDSAAKLSAAEKES 866
Cdd:PRK04778 337 K----------QSYTLNESELE----SVRQLEKQLESLEKQYDEITERIAE--QEIaysELQE-ELEEILKQLEEIEKEQ 399
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 867 RALDKELARCRDVGS----KLKELEKDNRDLTKQvtMHTRTLTTLREDLVLEKlksQQLSSELDKLSQELEKV 935
Cdd:PRK04778 400 EKLSEMLQGLRKDELeareKLERYRNKLHEIKRY--LEKSNLPGLPEDYLEMF---FEVSDEIEALAEELEEK 467
|
|
| FPP |
pfam05911 |
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant ... |
435-563 |
2.79e-03 |
|
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant proteins that are filament-like. It interacts with the nuclear envelope-associated protein, MAF1, the WPP family pfam13943.
Pssm-ID: 461778 [Multi-domain] Cd Length: 859 Bit Score: 42.74 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 435 ELEQLSKNADLSDASRKSFVFELNEcassriLKLEKEN--QSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEK 512
Cdd:pfam05911 668 DGPLVSGSNDLKTEENKRLKEEFEQ------LKSEKENleVELASCTENLESTKSQLQESEQLIAELRSELASLKESNSL 741
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 47059089 513 LQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKAdrarqikDLEQEK 563
Cdd:pfam05911 742 AETQLKCMAESYEDLETRLTELEAELNELRQKFEALEV-------ELEEEK 785
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
594-873 |
2.90e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 41.82 E-value: 2.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 594 QAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHR-LEKENEQLTKEVTSLKAATEKVEALEHQSQGLELEN 672
Cdd:COG1340 1 SKTDELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAEkRDELNAQVKELREEAQELREKRDELNEKVKELKEER 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 673 RSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRFtsakmaQIETENRQLEREKEELRRDVELLKTLSKKSE 752
Cdd:COG1340 81 DELNEKLNELREELDELRKELAELNKAGGSIDKLRKEIERLEW------RQQTEVLSPEEEKELVEKIKELEKELEKAKK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 753 RLEL--SYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKD 830
Cdd:COG1340 155 ALEKneKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADELR---KEADELHKEIVEAQEKADELHEE 231
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 47059089 831 KKLLEKEARRLwqQVELKDAILDDSAAKLSAAEKESRALDKEL 873
Cdd:COG1340 232 IIELQKELREL--RKELKKLRKKQRALKREKEKEELEEKAEEI 272
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1791-1995 |
3.28e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1791 ASLSRAFSLASADLLRASGPEACRPESPQKPGGHEAAGARETSTHSLQGSHILARERTP---IVGKADSPSPGQGTRGRP 1867
Cdd:PRK07764 591 APGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAApehHPKHVAVPDASDGGDGWP 670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1868 LDTRRFSLAPPkeerlaplqQSATAPALATGCSSGSNPQIQHFSPTVAPAVRTKSKVPQHSGEVATVAPVRPglgtSEGD 1947
Cdd:PRK07764 671 AKAGGAAPAAP---------PPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSP----AADD 737
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 47059089 1948 GGPGHGYSEgLLTKSPGRSSDLPPHVKRGPDDFSQGSSSKSTPASPEP 1995
Cdd:PRK07764 738 PVPLPPEPD-DPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEE 784
|
|
| LCD1 |
pfam09798 |
DNA damage checkpoint protein; This is a family of proteins which regulate checkpoint kinases. ... |
782-841 |
3.53e-03 |
|
DNA damage checkpoint protein; This is a family of proteins which regulate checkpoint kinases. In Schizosaccharomyces pombe this protein is called Rad26 and in Saccharomyces cerevisiae it is called LCD1.
Pssm-ID: 462906 Cd Length: 615 Bit Score: 42.31 E-value: 3.53e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47059089 782 LQRELSQLEAERQalrRDLETLQLTHKQLEGA-EEDRKALEQEVAQLEKDKKLLEKEARRL 841
Cdd:pfam09798 2 LRDKLELLQQEKE---KELEKLKNSYEELKSShEEELEKLKQEVQKLEDEKKFLLNELRSL 59
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1206-1384 |
3.55e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1206 DLQQRKAELEELEKVLSTEREALEREQKTNAIATSENQRLRGELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELS 1285
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1286 RWQVRFDELKEQHQSMDI-----------SLTKMDNHCELLSRLKGNLEEENHHLLSQIQLLSQQNQmLLEQNMESKEQY 1354
Cdd:COG4942 101 AQKEELAELLRALYRLGRqpplalllspeDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA-ELEAERAELEAL 179
|
170 180 190
....*....|....*....|....*....|
gi 47059089 1355 HEEQKQYIDKLNALRRHKEKLEEKIMDQYK 1384
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELA 209
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
503-835 |
3.59e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.81 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 503 NQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLqsgmEALKADRARQIKDLEQEKGHLHQAVWSLRErpQVNST 582
Cdd:COG4372 30 SEQLRKALFELDKLQEELEQLREELEQAREELEQLEEEL----EQARSELEQLEEELEELNEQLQAAQAELAQ--AQEEL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 583 KDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEaleKELHRLEKENEQLTKEVTSLKAATEKVEALE 662
Cdd:COG4372 104 ESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAERE---EELKELEEQLESLQEELAALEQELQALSEAE 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 663 HQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVE 742
Cdd:COG4372 181 AEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEI 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 743 LLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRKALEQ 822
Cdd:COG4372 261 EELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELA 340
|
330
....*....|...
gi 47059089 823 EVAQLEKDKKLLE 835
Cdd:COG4372 341 DLLQLLLVGLLDN 353
|
|
| Prefoldin_2 |
pfam01920 |
Prefoldin subunit; This family includes prefoldin subunits that are not detected by pfam02996. |
778-859 |
3.78e-03 |
|
Prefoldin subunit; This family includes prefoldin subunits that are not detected by pfam02996.
Pssm-ID: 396482 [Multi-domain] Cd Length: 102 Bit Score: 38.74 E-value: 3.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 778 KSQALQRELSQLEAERQALRRDLETLQLTHKQLEGAEEDRK------------ALEQEVAQLEKDKKLLEKEARRLWQQV 845
Cdd:pfam01920 3 KFQQLQQQLQLLAQQIKQLETQLKELELALEELELLDEDTKvykligdvlvkqDKEEVKEQLEERKETLEKEIKTLEKQL 82
|
90
....*....|....
gi 47059089 846 ELKDAILDDSAAKL 859
Cdd:pfam01920 83 EKLEKELEELKEEL 96
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
763-888 |
3.93e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.88 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 763 AENLQLQHSLEssthksqALQRELSQLEAERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKdkklLEKEARR-- 840
Cdd:PRK09039 74 QGNQDLQDSVA-------NLRASLSAAEAERSRLQALLAELA---GAGAAAEGRAGELAQELDSEKQ----VSARALAqv 139
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 47059089 841 --LWQQVELKDAILDDSAAKLSAAEKESRALDKELArcrDVGSKL--------KELEK 888
Cdd:PRK09039 140 elLNQQIAALRRQLAALEAALDASEKRDRESQAKIA---DLGRRLnvalaqrvQELNR 194
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
654-868 |
3.94e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 3.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 654 ATEKVEALEHQSQGLELENRSLRKSLDTLQNvsvQLEGLERDKQQLGQENLELRKMVEAMRftsakmAQIETENRQLERE 733
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQA---ELEELNEEYNELQAELEALQAEIDKLQ------AEIAEAEAEIEER 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 734 KEELRRDVELLKTLSKKSERLEL------------SYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLE 801
Cdd:COG3883 85 REELGERARALYRSGGSVSYLDVllgsesfsdfldRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKA 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47059089 802 TLQLTHKQLEGAEEDRKA----LEQEVAQLEKDKKLLEKEARRLWQQVELKDAILDDSAAKLSAAEKESRA 868
Cdd:COG3883 165 ELEAAKAELEAQQAEQEAllaqLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
350-696 |
4.05e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 41.98 E-value: 4.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 350 EELREDNIILIETKAMLEEQLTASRArsdkvhelekenlqLKSKLHDLELDRDADKKQIEKLLEEYMVLEMAQKQSMKES 429
Cdd:pfam19220 41 RELPQAKSRLLELEALLAQERAAYGK--------------LRRELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAK 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 430 AHLGWELEQlsKNADLSDASRKSFVfelnecASSRILKLEKENQSLQSTIQGLrDTSLALEESSL-----KYGELEKENQ 504
Cdd:pfam19220 107 EELRIELRD--KTAQAEALERQLAA------ETEQNRALEEENKALREEAQAA-EKALQRAEGELatareRLALLEQENR 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 505 QLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRER-----PQV 579
Cdd:pfam19220 178 RLQALSEEQAAELAELTRRLAELETQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERASLRMKlealtARA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 580 NSTKDVEKENRALHQAVTEAG----SKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHR----LEKENEQLTKEVTS- 650
Cdd:pfam19220 258 AATEQLLAEARNQLRDRDEAIraaeRRLKEASIERDTLERRLAGLEADLERRTQQFQEMQRaraeLEERAEMLTKALAAk 337
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 47059089 651 ---LKAATEKVEALehQSQGLELENRSLRKSLDTLQNVSVQLEGLERDK 696
Cdd:pfam19220 338 daaLERAEERIASL--SDRIAELTKRFEVERAALEQANRRLKEELQRER 384
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
689-837 |
4.38e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 689 LEGLERDKQqlgqeNLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLK-TLSKKSERLElsyqsvsaeNLQ 767
Cdd:COG2433 382 LEELIEKEL-----PEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEaELEEKDERIE---------RLE 447
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47059089 768 LQHSLESSTHKSQAL-QRELSQLEAERQALRRDLETLqlthkqlegaEEDRKALEQEVAQLEKDKKLLEKE 837
Cdd:COG2433 448 RELSEARSEERREIRkDREISRLDREIERLERELEEE----------RERIEELKRKLERLKELWKLEHSG 508
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
247-542 |
4.59e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 41.75 E-value: 4.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADtKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSAR-----------AYRDEL 315
Cdd:PRK04778 85 EEQLFEAEELND-KFRFRKAKHEINEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKdlyrelrksllANRFSF 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 316 -DSLREKANRVERLEMDLVRCKEKLHDVDFYKARM--EELREDNI-----------ILIETKAMLEEQLTASRARSDK-- 379
Cdd:PRK04778 164 gPALDELEKQLENLEEEFSQFVELTESGDYVEAREilDQLEEELAaleqimeeipeLLKELQTELPDQLQELKAGYRElv 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 380 --------------VHELEKENLQLKSKLHDLELDRDADK-KQIEKLLEE-YMVLEM---AQKQSMKESAHLGWELEQLS 440
Cdd:PRK04778 244 eegyhldhldiekeIQDLKEQIDENLALLEELDLDEAEEKnEEIQERIDQlYDILERevkARKYVEKNSDTLPDFLEHAK 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 441 KNAD--LSDASRKSFVFELNECASSRILKLEKENQSLQSTIQGLRDtslALEESSLKYGELEKENQQLSKKIEKLQTQle 518
Cdd:PRK04778 324 EQNKelKEEIDRVKQSYTLNESELESVRQLEKQLESLEKQYDEITE---RIAEQEIAYSELQEELEEILKQLEEIEKE-- 398
|
330 340
....*....|....*....|....
gi 47059089 519 rEKQSNQDLETLSEELIREKEQLQ 542
Cdd:PRK04778 399 -QEKLSEMLQGLRKDELEAREKLE 421
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
255-415 |
4.91e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 4.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 255 ELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAK------QDNIQLAADARSARAYRDELDSLREkanRVERL 328
Cdd:COG1579 32 ELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEarikkyEEQLGNVRNNKEYEALQKEIESLKR---RISDL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 329 EMDLvrcKEKLHDVDFYKARMEELREDniilietKAMLEEQLTASRArsdkvhELEKENLQLKSKLHDLELDRDADKKQI 408
Cdd:COG1579 109 EDEI---LELMERIEELEEELAELEAE-------LAELEAELEEKKA------ELDEELAELEAELEELEAEREELAAKI 172
|
....*...
gi 47059089 409 EK-LLEEY 415
Cdd:COG1579 173 PPeLLALY 180
|
|
| CHASE3 |
COG5278 |
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms]; |
275-733 |
4.91e-03 |
|
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms];
Pssm-ID: 444089 [Multi-domain] Cd Length: 530 Bit Score: 41.82 E-value: 4.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 275 EQLADTRHEVDQLVLELQKAKQDNIQLAADARSARA-YRDELDSLREKANRVERLEMDLVRckeKLHDVDFYKARMEELR 353
Cdd:COG5278 79 EPYEEARAEIDELLAELRSLTADNPEQQARLDELEAlIDQWLAELEQVIALRRAGGLEAAL---ALVRSGEGKALMDEIR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 354 EDNIILIETKAMLEEQLTASRARSDKVHELEKENLQLksklhDLELDRDADKKQIEKLLEEYMVLEMAQKQSMKESAHLG 433
Cdd:COG5278 156 ARLLLLALALAALLLAAAALLLLLLALAALLALAELL-----LLALARALAALLLLLLLEAELAAAAALLAAAAALAALA 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 434 WELEQLSKNADLSDASRKSFVFELNECASSRILKLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKL 513
Cdd:COG5278 231 ALELLAALALALALLLAALLLALLAALALAALLAAALLALAALLLALAAAAALAAAAALELAAAEALALAELELELLLAA 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 514 QTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKDVEKENRALH 593
Cdd:COG5278 311 AAAAAAAAAAAAAALAALLALALATALAAAAAALALLAALLAEAAAAAAEEAEAAAEAAAAALAGLAEVEAEGAAEAVEL 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 594 QAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENR 673
Cdd:COG5278 391 EVLAIAAAAAAAAAEAAAAAAAAAAASAAEALELAEALAEALALAEEEALALAAASSELAEAGAALALAAAEALAEELAA 470
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 674 SLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETENRQLERE 733
Cdd:COG5278 471 VAALAALAAAAAALAEAEAAAALAAAAALSLALALAALLLAAAEAALAAALAAALASAEL 530
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
743-850 |
5.06e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 41.86 E-value: 5.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 743 LLKTLSKKSERLELSYQSVSAENLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLEtlQLTHKQLEGAEEDRKALEQ 822
Cdd:PRK11448 143 LLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLE--QLQEKAAETSQERKQKRKE 220
|
90 100
....*....|....*....|....*...
gi 47059089 823 EVAQLEKDKKLLEKEARRLWQQvELKDA 850
Cdd:PRK11448 221 ITDQAAKRLELSEEETRILIDQ-QLRKA 247
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
253-641 |
5.32e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 41.76 E-value: 5.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 253 AVELADtKARLRRVRQELEEKTEQLADTRHEVDQLvlelqkakqdniqlaadarsarayRDELDSLREKANRVeRLEMDl 332
Cdd:pfam06160 72 AEELND-KYRFKKAKKALDEIEELLDDIEEDIKQI------------------------LEELDELLESEEKN-REEVE- 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 333 vRCKEKlhdvdfYKARMEELREDNIILIETKAMLEEQLTASRARSDKVHEL---------EKENLQLKSKLHDLEldrdA 403
Cdd:pfam06160 125 -ELKDK------YRELRKTLLANRFSYGPAIDELEKQLAEIEEEFSQFEELtesgdyleaREVLEKLEEETDALE----E 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 404 DKKQIEKLLEEYMVLEMAQkqsmkesahlgweLEQLSKNADlsDASRKSFVFELNEcASSRILKLEKENQSLQSTIqglr 483
Cdd:pfam06160 194 LMEDIPPLYEELKTELPDQ-------------LEELKEGYR--EMEEEGYALEHLN-VDKEIQQLEEQLEENLALL---- 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 484 dtslaleeSSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKAD------------ 551
Cdd:pfam06160 254 --------ENLELDEAEEALEEIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDYLEHAEEQNKELKEElervqqsytlne 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 552 ----RARQI-KDLEQEKGHLHQAVWSLRERPQVNStkDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQ 626
Cdd:pfam06160 326 neleRVRGLeKQLEELEKRYDEIVERLEEKEVAYS--ELQEELEEILEQLEEIEEEQEEFKESLQSLRKDELEAREKLDE 403
|
410
....*....|....*....
gi 47059089 627 aeaLEKELH----RLEKEN 641
Cdd:pfam06160 404 ---FKLELReikrLVEKSN 419
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
668-935 |
5.55e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 5.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 668 LELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLeLRKMVEAMRFTSAKMAQIETENRQLERekeeLRRDVELlkTL 747
Cdd:COG3206 59 LLVEPQSSDVLLSGLSSLSASDSPLETQIEILKSRPV-LERVVDKLNLDEDPLGEEASREAAIER----LRKNLTV--EP 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 748 SKKSERLELSYQSVSAE--------------NLQLQHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHK----- 808
Cdd:COG3206 132 VKGSNVIEISYTSPDPElaaavanalaeaylEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGlvdls 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 809 ---------------QLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLwqqveLKDAILDDSAAKLSAAEKEsraLDKEL 873
Cdd:COG3206 212 eeaklllqqlselesQLAEARAELAEAEARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAE---LAELS 283
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47059089 874 ARCRDVGSKLKELEKDNRDLTKQV-TMHTRTLTTLREDLVLEKLKSQQLSSELDKLSQELEKV 935
Cdd:COG3206 284 ARYTPNHPDVIALRAQIAALRAQLqQEAQRILASLEAELEALQAREASLQAQLAQLEARLAEL 346
|
|
| TPR_MLP1_2 |
pfam07926 |
TPR/MLP1/MLP2-like protein; The sequences featured in this family are similar to a region of ... |
717-847 |
5.88e-03 |
|
TPR/MLP1/MLP2-like protein; The sequences featured in this family are similar to a region of human TPR protein and to yeast myosin-like proteins 1 (MLP1) and 2 (MLP2). These proteins share a number of features; for example, they all have coiled-coil regions and all three are associated with nuclear pores. TPR is thought to be a component of nuclear pore complex- attached intra-nuclear filaments, and is implicated in nuclear protein import. Moreover, its N-terminal region is involved in the activation of oncogenic kinases, possibly by mediating the dimerization of kinase domains or by targeting these kinases to the nuclear pore complex. MLP1 and MLP2 are involved in the process of telomere length regulation, where they are thought to interact with proteins such as Tel1p and modulate their activity.
Pssm-ID: 462316 [Multi-domain] Cd Length: 129 Bit Score: 38.77 E-value: 5.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 717 SAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERlELSYQSVSAENLQlqhslessthksqALQRELSQLEAERQAL 796
Cdd:pfam07926 11 KRLKEEAADAEAQLQKLQEDLEKQAEIAREAQQNYER-ELVLHAEDIKALQ-------------ALREELNELKAEIAEL 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 47059089 797 RRDLETLQLTHKQLEGA-EEDRKALEQEVAQLEKDKKLLEKEARRLWQQVEL 847
Cdd:pfam07926 77 KAEAESAKAELEESEESwEEQKKELEKELSELEKRIEDLNEQNKLLHDQLES 128
|
|
| FtsB |
COG2919 |
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning]; |
792-840 |
6.07e-03 |
|
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442163 [Multi-domain] Cd Length: 96 Bit Score: 37.94 E-value: 6.07e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 47059089 792 ERQALRRDLETLQlthKQLEGAEEDRKALEQEVAQLEKDKKLLEKEARR 840
Cdd:COG2919 30 AYRELRQEIAELE---AENAKLKARNAELEAEVADLKDGPDYIEERARE 75
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
601-1085 |
6.54e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.43 E-value: 6.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 601 SKLSQLELEKQQLHRDLEEAKEKGEQAEA----LEKELHRLEKENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLR 676
Cdd:PRK01156 183 SNIDYLEEKLKSSNLELENIKKQIADDEKshsiTLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 677 KSLDTLQNVSVQLEGLE----------------------RDKQQLGQ-----ENL--ELRKMVEAMRftsaKMAQIETEN 727
Cdd:PRK01156 263 SDLSMELEKNNYYKELEerhmkiindpvyknrnyindyfKYKNDIENkkqilSNIdaEINKYHAIIK----KLSVLQKDY 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 728 RQLE---REKEELRRDVELLKT--------------LSKKSERLELSYQSVSAENLQ-----------LQHSLESSTHKS 779
Cdd:PRK01156 339 NDYIkkkSRYDDLNNQILELEGyemdynsylksiesLKKKIEEYSKNIERMSAFISEilkiqeidpdaIKKELNEINVKL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 780 QALQRELSQLEAERQALRRDLETLQLTHKQLEGA----------------------EEDRKALEQEVAQLEKDKKLLEKE 837
Cdd:PRK01156 419 QDISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgttlgeeksnhiinhyNEKKSRLEEKIREIEIEVKDIDEK 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 838 ARrlwQQVELKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNRDLTKQV-TMHTRTLTTLREDLVleKL 916
Cdd:PRK01156 499 IV---DLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYkSLKLEDLDSKRTSWL--NA 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 917 KSQQLSSELDKL-SQELEKVGLSKDLL--LQE-DDGHGDGKGKTESALKttlamkeekivfleaQVEEKESLSRQLQIEL 992
Cdd:PRK01156 574 LAVISLIDIETNrSRSNEIKKQLNDLEsrLQEiEIGFPDDKSYIDKSIR---------------EIENEANNLNNKYNEI 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 993 QMIKKEHEQLRQTQEGGdKAQNAlkrppgkvtshqEKEAWEPSHKEATMELLRVKDRAIELERSNAALQAERQLLKEQLQ 1072
Cdd:PRK01156 639 QENKILIEKLRGKIDNY-KKQIA------------EIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIE 705
|
570
....*....|...
gi 47059089 1073 HLETQNVSFSSQI 1085
Cdd:PRK01156 706 ILRTRINELSDRI 718
|
|
| TMCO5 |
pfam14992 |
TMCO5 family; The TMCO5 family includes human transmembrane and coiled-coil domain-containing ... |
692-890 |
6.58e-03 |
|
TMCO5 family; The TMCO5 family includes human transmembrane and coiled-coil domain-containing proteins 5A and 5B.
Pssm-ID: 464427 [Multi-domain] Cd Length: 278 Bit Score: 40.86 E-value: 6.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 692 LERDKQQLGQENLE-LRKMVE---AMRFTSAKMAQIETENRQLEREKEE--LRRDVELLKTLSKKSERLELSYQSVSAEN 765
Cdd:pfam14992 8 LEKDLQRLDEANQVlLLKIQEkeeEIQSLEREITLTRSLAEDEEREELNftIMEKEDALQELELETAKLEKKNEILVKSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 766 LQLQHSLESSTHKSQALQRE-LSQLEAERQA-LRRDLETLQLTHKQLEGAEEDRkaleQEVAQLEKDKKLLEKEARRLWQ 843
Cdd:pfam14992 88 MELQRKLSRKSDKNTGLEQEtLKQMLEELKVkLQQSEESCADQEKELAKVESDY----QSVHQLCEDQALCIKKYQEILR 163
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 47059089 844 QVElkdailddsaaklsaAEKESRALDKELARCRDVGSKLKELEKDN 890
Cdd:pfam14992 164 KME---------------EEKETRLLEKEVSKAQSNSSQRVKLVETI 195
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
447-562 |
6.59e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 6.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 447 DASRKSFVFELNECASSRILKLEKENQSLQSTIQGLrDTSLALEESSL--KYGELEKENQQLSKKIEKLQTQLEREKQSN 524
Cdd:PRK12704 52 EAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKL-EKRLLQKEENLdrKLELLEKREEELEKKEKELEQKQQELEKKE 130
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 47059089 525 QDLETLSEELIRE------------KEQLQSGMEA-LKADRARQIKDLEQE 562
Cdd:PRK12704 131 EELEELIEEQLQElerisgltaeeaKEILLEKVEEeARHEAAVLIKEIEEE 181
|
|
| DUF4515 |
pfam14988 |
Domain of unknown function (DUF4515); This family of proteins is found in bacteria and ... |
499-702 |
6.77e-03 |
|
Domain of unknown function (DUF4515); This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 198 and 469 amino acids in length. There are two completely conserved L residues that may be functionally important.
Pssm-ID: 405647 [Multi-domain] Cd Length: 206 Bit Score: 40.14 E-value: 6.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 499 LEKENQQLSKKIEKLQTQLEREKqsnqdletlsEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLRERPQ 578
Cdd:pfam14988 9 LAKKTEEKQKKIEKLWNQYVQEC----------EEIERRRQELASRYTQQTAELQTQLLQKEKEQASLKKELQALRPFAK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 579 VNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAKEKGEQaealeKELHRLEKENEQLTKEVTSLKAATEKv 658
Cdd:pfam14988 79 LKESQEREIQDLEEEKEKVRAETAEKDREAHLQFLKEKALLEKQLQEL-----RILELGERATRELKRKAQALKLAAKQ- 152
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 47059089 659 eALEHQSQGLELENRSLRKSLDTL----QNVSVQLEGLERDKQQLGQE 702
Cdd:pfam14988 153 -ALSEFCRSIKRENRQLQKELLQLiqetQALEAIKSKLENRKQRLKEE 199
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
247-430 |
6.79e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 6.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 247 EDKQHLAVELADTKARLRRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARA-YRDELDSLREKANRV 325
Cdd:COG3883 23 KELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREeLGERARALYRSGGSV 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 326 ERLEM--------DLVRCKEKLHDV-DFYKARMEELREDNIILIETKAMLEEQLTASRAR----SDKVHELEKENLQLKS 392
Cdd:COG3883 103 SYLDVllgsesfsDFLDRLSALSKIaDADADLLEELKADKAELEAKKAELEAKLAELEALkaelEAAKAELEAQQAEQEA 182
|
170 180 190
....*....|....*....|....*....|....*...
gi 47059089 393 KLHDLELDRDADKKQIEKLLEEYMVLEMAQKQSMKESA 430
Cdd:COG3883 183 LLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAA 220
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
196-376 |
6.82e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 6.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 196 LRRLIDERDECTELIVDLTQERDYLQTQQPpspgkfsspDSTPSPTSSLSSEDKQHLAVELADTKARLRRVRQ---ELEE 272
Cdd:COG4913 619 LAELEEELAEAEERLEALEAELDALQERRE---------ALQRLAEYSWDEIDVASAEREIAELEAELERLDAssdDLAA 689
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 273 KTEQLADTRHEVDQLVLELQKAKQDNIQLAADARSARAYRDELDSLREKANRVERLEMDLvRCKEKLHDVDFYKAR---M 349
Cdd:COG4913 690 LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRA-LLEERFAAALGDAVErelR 768
|
170 180
....*....|....*....|....*..
gi 47059089 350 EELREDNIILIETKAMLEEQLTASRAR 376
Cdd:COG4913 769 ENLEERIDALRARLNRAEEELERAMRA 795
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
490-758 |
6.90e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 6.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 490 EESSLKYGELEKENQQLSKKIEKLQTQLEREKqsnqdleTLSEELIREKEQlqsGMEALkadrarqIKDLEQEKGhlhqa 569
Cdd:PRK05771 39 ELSNERLRKLRSLLTKLSEALDKLRSYLPKLN-------PLREEKKKVSVK---SLEEL-------IKDVEEELE----- 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 570 vwslrerpqvnstkDVEKENRALHQAVTEAGSKLSQLELEKQQLhrdleeakekgEQAEALEKELHRLekeneqLTKEVT 649
Cdd:PRK05771 97 --------------KIEKEIKELEEEISELENEIKELEQEIERL-----------EPWGNFDLDLSLL------LGFKYV 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 650 SLKAAT---EKVEALEHQSQGLELENRSLRKSLDT--LQNVSVQLEGLERDKQQLGQENLELRKMVEAmrftSAKMAQIE 724
Cdd:PRK05771 146 SVFVGTvpeDKLEELKLESDVENVEYISTDKGYVYvvVVVLKELSDEVEEELKKLGFERLELEEEGTP----SELIREIK 221
|
250 260 270
....*....|....*....|....*....|....
gi 47059089 725 TENRQLEREKEELRRDvelLKTLSKKSERLELSY 758
Cdd:PRK05771 222 EELEEIEKERESLLEE---LKELAKKYLEELLAL 252
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
586-1404 |
7.16e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 7.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 586 EKENRALHQAVTEAGSKLSQLELEKQQLHRDLEEAK-------EKGEQAEALEKELHRLEKENEQLTKEVTSLKAATEKV 658
Cdd:PRK04863 299 RRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASdhlnlvqTALRQQEKIERYQADLEELEERLEEQNEVVEEADEQQ 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 659 EALEHQSQGLELENRSLRKSL-------DTLQNVSVQ----LEGLERDKQQLGQENLELRKMVEAMRFTSAKMAQIETEN 727
Cdd:PRK04863 379 EENEARAEAAEEEVDELKSQLadyqqalDVQQTRAIQyqqaVQALERAKQLCGLPDLTADNAEDWLEEFQAKEQEATEEL 458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 728 RQLERE-------KEELRRDVELLKTLSKKSERL--------------ELSYQSVSAENLQLQHS-LESSTHKSQALQRE 785
Cdd:PRK04863 459 LSLEQKlsvaqaaHSQFEQAYQLVRKIAGEVSRSeawdvarellrrlrEQRHLAEQLQQLRMRLSeLEQRLRQQQRAERL 538
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 786 LSQL----------EAERQALRRDLETLQLTHK-QLEGAEEDRKALEQEVAQLEKDKKLLEKEARRlWQQvelkdaiLDD 854
Cdd:PRK04863 539 LAEFckrlgknlddEDELEQLQEELEARLESLSeSVSEARERRMALRQQLEQLQARIQRLAARAPA-WLA-------AQD 610
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 855 SAAKLSAAEKEsraldkELARCRDVGSklkelekdnrdLTKQVTMHTRTLTTLREDLVLEKlksQQLSSELDKLSQ---- 930
Cdd:PRK04863 611 ALARLREQSGE------EFEDSQDVTE-----------YMQQLLERERELTVERDELAARK---QALDEEIERLSQpggs 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 931 ELEK-VGLSKDL---LLQE--DDGHGDGKGKTESALKTtlAMkeEKIVfleaqVEEKESLSRQLQIE------LQMIKKE 998
Cdd:PRK04863 671 EDPRlNALAERFggvLLSEiyDDVSLEDAPYFSALYGP--AR--HAIV-----VPDLSDAAEQLAGLedcpedLYLIEGD 741
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 999 HEQLRQTQEGGDKAQNAlkrppgkVTSHQEKEAWE----PSH-------KEATMELLRVKdrAIELERSNAALQAERQLL 1067
Cdd:PRK04863 742 PDSFDDSVFSVEELEKA-------VVVKIADRQWRysrfPEVplfgraaREKRIEQLRAE--REELAERYATLSFDVQKL 812
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1068 KEQLQHLetqnvsfsSQILTLQKQSAFLQEhtttlqtQTAKLQVENSTLSSQNAALSAQYTvlQSQQaakeaeheglqqQ 1147
Cdd:PRK04863 813 QRLHQAF--------SRFIGSHLAVAFEAD-------PEAELRQLNRRRVELERALADHES--QEQQ------------Q 863
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1148 QEQLAAVYEALLQDHKHLGT------------LYEC-----QSSEYEALIRQHSclKTLhRNLELEHKELGERHGDLQQR 1210
Cdd:PRK04863 864 RSQLEQAKEGLSALNRLLPRlnlladetladrVEEIreqldEAEEAKRFVQQHG--NAL-AQLEPIVSVLQSDPEQFEQL 940
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1211 KAELEELEKVLSTERE---AL-EREQKTNAIATSENQRLrgeLDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSR 1286
Cdd:PRK04863 941 KQDYQQAQQTQRDAKQqafALtEVVQRRAHFSYEDAAEM---LAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQAQLAQ 1017
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 1287 WQVRFDELKEQHQsmdislTKMDNHCELLSRLKG-------NLEEenhhllsQIQLLSQQNQMLLEQNMESKEQYHEEQK 1359
Cdd:PRK04863 1018 YNQVLASLKSSYD------AKRQMLQELKQELQDlgvpadsGAEE-------RARARRDELHARLSANRSRRNQLEKQLT 1084
|
890 900 910 920
....*....|....*....|....*....|....*....|....*
gi 47059089 1360 QYIDKLNALRRHKEKLEEKIMDQYKFYDPApkkKNHWIGAKALVK 1404
Cdd:PRK04863 1085 FCEAEMDNLTKKLRKLERDYHEMREQVVNA---KAGWCAVLRLVK 1126
|
|
| Jnk-SapK_ap_N |
pfam09744 |
JNK_SAPK-associated protein-1; This is the N-terminal 200 residues of a set of proteins ... |
489-598 |
7.47e-03 |
|
JNK_SAPK-associated protein-1; This is the N-terminal 200 residues of a set of proteins conserved from yeasts to humans. Most of the proteins in this entry have an RhoGEF pfam00621 domain at their C-terminal end.
Pssm-ID: 462875 [Multi-domain] Cd Length: 150 Bit Score: 39.14 E-value: 7.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 489 LEESSLKYGELEKENQQLSKKIEKLQTQLEREKQ----SNQDLETLSEELIREKEQLQSGMEALKadraRQIKDLEQEKg 564
Cdd:pfam09744 38 LESLASRNQEHNVELEELREDNEQLETQYEREKAlrkrAEEELEEIEDQWEQETKDLLSQVESLE----EENRRLEADH- 112
|
90 100 110
....*....|....*....|....*....|....
gi 47059089 565 hlhqaVWSLRERPQvnstkDVEKENRALHQAVTE 598
Cdd:pfam09744 113 -----VSRLEEKEA-----ELKKEYSKLHERETE 136
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
379-562 |
7.83e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 7.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 379 KVHELEKENLQLKSKLHDLELDRDADKKQIEKLLEEYMVLEMAQKQSMKESAHLGWELEQLSKnadlsdasrksfvfeln 458
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEA----------------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 459 ecassrilkLEKENQSLQSTIQGLRD-TSLALEESSLK--YGELEKENQQLSKKIEKLQTQLEREK----QSNQDLETLS 531
Cdd:COG1579 74 ---------RIKKYEEQLGNVRNNKEyEALQKEIESLKrrISDLEDEILELMERIEELEEELAELEaelaELEAELEEKK 144
|
170 180 190
....*....|....*....|....*....|.
gi 47059089 532 EELIREKEQLQSGMEALKADRARQIKDLEQE 562
Cdd:COG1579 145 AELDEELAELEAELEELEAEREELAAKIPPE 175
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
248-372 |
7.92e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 7.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 248 DKqhlAVELADTKARlrRVRQELEEKTEQLADTRHEVDQLVLELQKAKQDniQLAADARSARAYRDELDSLREKAnrvER 327
Cdd:COG0542 389 DK---AIDLIDEAAA--RVRMEIDSKPEELDELERRLEQLEIEKEALKKE--QDEASFERLAELRDELAELEEEL---EA 458
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 47059089 328 LEMDLVRCKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLTA 372
Cdd:COG0542 459 LKARWEAEKELIEEIQELKEELEQRYGKIPELEKELAELEEELAE 503
|
|
| ZapB |
COG3074 |
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
498-554 |
7.99e-03 |
|
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442308 [Multi-domain] Cd Length: 79 Bit Score: 37.26 E-value: 7.99e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 47059089 498 ELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRAR 554
Cdd:COG3074 8 ELEAKVQQAVDTIELLQMEVEELKEKNEELEQENEELQSENEELQSENEQLKTENAE 64
|
|
| GAS |
pfam13851 |
Growth-arrest specific micro-tubule binding; This family is the highly conserved central ... |
618-800 |
8.32e-03 |
|
Growth-arrest specific micro-tubule binding; This family is the highly conserved central region of a number of metazoan proteins referred to as growth-arrest proteins. In mouse, Gas8 is predominantly a testicular protein, whose expression is developmentally regulated during puberty and spermatogenesis. In humans, it is absent in infertile males who lack the ability to generate gametes. The localization of Gas8 in the motility apparatus of post-meiotic gametocytes and mature spermatozoa, together with the detection of Gas8 also in cilia at the apical surfaces of epithelial cells lining the pulmonary bronchi and Fallopian tubes suggests that the Gas8 protein may have a role in the functioning of motile cellular appendages. Gas8 is a microtubule-binding protein localized to regions of dynein regulation in mammalian cells.
Pssm-ID: 464001 [Multi-domain] Cd Length: 200 Bit Score: 39.50 E-value: 8.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 618 EEAKEKGEQAEALEKELHRLEKENEQLTKEvtsLKAATEKVEALEHQSQGLELENRSlrksldtLQNVSVQLEGLERDKQ 697
Cdd:pfam13851 33 EEIAELKKKEERNEKLMSEIQQENKRLTEP---LQKAQEEVEELRKQLENYEKDKQS-------LKNLKARLKVLEKELK 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 698 QLGQENLELRkmveaMRFTsakmaqietenrQLEREKEEL-RRDVELLKTLSKKSE--------RLELSYQSVSAENLQL 768
Cdd:pfam13851 103 DLKWEHEVLE-----QRFE------------KVERERDELyDKFEAAIQDVQQKTGlknlllekKLQALGETLEKKEAQL 165
|
170 180 190
....*....|....*....|....*....|....*
gi 47059089 769 QHSLESS---THKSQALQRELSQLEAERQALRRDL 800
Cdd:pfam13851 166 NEVLAAAnldPDALQAVTEKLEDVLESKNQLIKDL 200
|
|
| COG4026 |
COG4026 |
Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General ... |
585-682 |
8.37e-03 |
|
Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General function prediction only];
Pssm-ID: 443204 [Multi-domain] Cd Length: 287 Bit Score: 40.48 E-value: 8.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 585 VEKEnraLHQAVTEAGSKLSQLELEKQQLHRDLEEAKEK----GEQAEALEKELHRLEKENEQLTKEVTSLKaatEKVEA 660
Cdd:COG4026 108 VRKE---IKNAIIRAGLKSLQNIPEYNELREELLELKEKideiAKEKEKLTKENEELESELEELREEYKKLR---EENSI 181
|
90 100
....*....|....*....|..
gi 47059089 661 LEHQSQGLELENRSLRKSLDTL 682
Cdd:COG4026 182 LEEEFDNIKSEYSDLKSRFEEL 203
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
384-671 |
8.50e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 8.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 384 EKENLQL-KSKLHDLEldrDADK--KQIEKLLEEYMVLEM-------AQKQSMKESAH---LGWELEQLSKNADLSDASR 450
Cdd:PLN02939 141 EKNILLLnQARLQALE---DLEKilTEKEALQGKINILEMrlsetdaRIKLAAQEKIHveiLEEQLEKLRNELLIRGATE 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 451 KSFVFELnecaSSRILKLEKENQSLQSTIQGLRDTSLALEESSLKYGELEKENQQLSKKIEKLQTQLEREKQSNQDLETL 530
Cdd:PLN02939 218 GLCVHSL----SKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPL 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 531 SEELIREK-EQLQSGMEALKaDRARQIKDLEQEKGHLHqavwslrerpqvnstKDVEKENRALHQAVTeagSKLSQLELE 609
Cdd:PLN02939 294 QYDCWWEKvENLQDLLDRAT-NQVEKAALVLDQNQDLR---------------DKVDKLEASLKEANV---SKFSSYKVE 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47059089 610 -KQQLHRDLEEAKEKGEQaealekELHRLEKENEQLTKE----VTSLKAATEKvEALEHQSQGLELE 671
Cdd:PLN02939 355 lLQQKLKLLEERLQASDH------EIHSYIQLYQESIKEfqdtLSKLKEESKK-RSLEHPADDMPSE 414
|
|
| PRK05431 |
PRK05431 |
seryl-tRNA synthetase; Provisional |
785-852 |
8.88e-03 |
|
seryl-tRNA synthetase; Provisional
Pssm-ID: 235461 [Multi-domain] Cd Length: 425 Bit Score: 40.82 E-value: 8.88e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47059089 785 ELSQLEAERQALRRDLETLQLTHK-------QLEGAEEDRKALEQEVAQLEKDKKLLEKEARRLwqQVELKDAIL 852
Cdd:PRK05431 29 ELLELDEERRELQTELEELQAERNalskeigQAKRKGEDAEALIAEVKELKEEIKALEAELDEL--EAELEELLL 101
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
612-934 |
9.20e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 41.10 E-value: 9.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 612 QLHRDLEEAKEKGEQAEALEKELHrlEKENEQLTKEVTSLKAATEKVEALEHQSQGLELEnrSLRKSLDTLQNVSVQLEG 691
Cdd:COG5185 211 ETGNLGSESTLLEKAKEIINIEEA--LKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLE--KLGENAESSKRLNENANN 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 692 LERDKQQLGQENLELRKMVEAMRFTSAKMAQIET--ENRQLEREKEELRRDVELLKT-LSKKSERLELSYQSVSAENLQL 768
Cdd:COG5185 287 LIKQFENTKEKIAEYTKSIDIKKATESLEEQLAAaeAEQELEESKRETETGIQNLTAeIEQGQESLTENLEAIKEEIENI 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 769 QHSLESSThksqaLQRELSQLEAERQALRRDLETLqltHKQLEGAEEDRKAleqevaQLEKDKKLLEKEARRLWQQVElk 848
Cdd:COG5185 367 VGEVELSK-----SSEELDSFKDTIESTKESLDEI---PQNQRGYAQEILA------TLEDTLKAADRQIEELQRQIE-- 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 849 daildDSAAKLSAAEKESRALDKELARCRDvgsklKELEKDNRDLTKQVTMHTRTLTTLREDLvleKLKSQQLSSELDKL 928
Cdd:COG5185 431 -----QATSSNEEVSKLLNELISELNKVMR-----EADEESQSRLEEAYDEINRSVRSKKEDL---NEELTQIESRVSTL 497
|
....*.
gi 47059089 929 SQELEK 934
Cdd:COG5185 498 KATLEK 503
|
|
| Tropomyosin_1 |
pfam12718 |
Tropomyosin like; This family is a set of eukaryotic tropomyosins. Within the yeast Tpm1 and ... |
602-713 |
9.48e-03 |
|
Tropomyosin like; This family is a set of eukaryotic tropomyosins. Within the yeast Tpm1 and Tpm2, biochemical and sequence analyses indicate that Tpm2p spans four actin monomers along a filament, whereas Tpm1p spans five. Despite its shorter length, Tpm2p can compete with Tpm1p for binding to F-actin. Over-expression of Tpm2p in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1p. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis. The family also contains higher eukaryote Tpm3 members.
Pssm-ID: 403808 [Multi-domain] Cd Length: 142 Bit Score: 38.44 E-value: 9.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 602 KLSQLELEKQQLHRDLEEAKEKGEQAE----ALEKELHRLEKENEQLTKEV----TSLKAATEKVEALE-HQSQG----- 667
Cdd:pfam12718 1 KMNSLKLEAENAQERAEELEEKVKELEqenlEKEQEIKSLTHKNQQLEEEVekleEQLKEAKEKAEESEkLKTNNenltr 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 47059089 668 --------LELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKMVEAM 713
Cdd:pfam12718 81 kiqlleeeLEESDKRLKETTEKLRETDVKAEHLERKVQALEQERDEWEKKYEEL 134
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
498-659 |
9.74e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 40.28 E-value: 9.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 498 ELEKENQQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRA--RQIKDLEQEKGHLHQAVWSLRE 575
Cdd:COG1340 82 ELNEKLNELREELDELRKELAELNKAGGSIDKLRKEIERLEWRQQTEVLSPEEEKElvEKIKELEKELEKAKKALEKNEK 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47059089 576 -RPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLHRDLEE-----------AKEKGEQAEALEKELHRLEKENEQ 643
Cdd:COG1340 162 lKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADElrkeadelhkeIVEAQEKADELHEEIIELQKELRE 241
|
170
....*....|....*.
gi 47059089 644 LTKEVTSLKAATEKVE 659
Cdd:COG1340 242 LRKELKKLRKKQRALK 257
|
|
| |
