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Conserved domains on  [gi|165905617|ref|NP_080403|]
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uncharacterized protein C5orf34 homolog [Mus musculus]

Protein Classification

DUF4524 domain-containing protein( domain architecture ID 10633249)

DUF4524 domain-containing protein similar to Danio rerio protein C5orf34 homolog

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4524 pfam15025
Domain of unknown function (DUF4524); This family of proteins is found in eukaryotes. Proteins ...
 9-154 2.37e-73

Domain of unknown function (DUF4524); This family of proteins is found in eukaryotes. Proteins in this family are typically between 197 and 638 amino acids in length.This is the N-terminal domain of the member proteins. The human gene is from C5orf34.


:

Pssm-ID: 464454  Cd Length: 146  Bit Score: 232.21  E-value: 2.37e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 165905617    9 MVLYEDDSVQVHYACGSTLQLSPCGSEFLFEKALPPSTHPLEQPERIRQRTHFVISNYREQLQRALDFRNSSATCPFLSE 88
Cdd:pfam15025   1 MVLYEDDSVEVHFSDGSRLQLSPCGSEFLFEKADPPSAHPLQPGERVRQRTRFAISRYKPLLAAALEFRNQYAERPYLPE 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 165905617   89 SIIPPERKKHIFIDFSEVEWPSLDRDDCIMYSESGVVKITSLDGHAYLCLPRSQHEFTVHFLCKVS 154
Cdd:pfam15025  81 EIIPSEKKKRLGSDISEAKWPSSSSSGLVTRGDGGSVTVSSEDGAAQLVLSPHQEEFTVEFLCKVS 146
DUF4520 pfam15016
Domain of unknown function (DUF4520); This family of proteins is found in eukaryotes. Proteins ...
 451-541 1.91e-37

Domain of unknown function (DUF4520); This family of proteins is found in eukaryotes. Proteins in this family are typically between 197 and 638 amino acids in length.This is the C-terminal domain of the member proteins.


:

Pssm-ID: 434393  Cd Length: 89  Bit Score: 134.00  E-value: 1.91e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 165905617  451 ILPVLLKESLIPGVGRFLAYSDDKVHAVFLDGVTVTLNWHLSSsaeKKQVDQGLSFGWCRLTFPDGQDQLIPTEHPGAYE 530
Cdd:pfam15016   1 MSPVVLEESTIPGIGRFTAYSDGRVHVHFDDRTILTLVWDFSS---GKTQVNRESTGWCKLLLPDGQQVLVRIEHPGHYE 77

                          90
                  ....*....|.
gi 165905617  531 RYVTSVISWCR 541
Cdd:pfam15016  78 RYVAAALEFCR 88
 
Name Accession Description Interval E-value
DUF4524 pfam15025
Domain of unknown function (DUF4524); This family of proteins is found in eukaryotes. Proteins ...
 9-154 2.37e-73

Domain of unknown function (DUF4524); This family of proteins is found in eukaryotes. Proteins in this family are typically between 197 and 638 amino acids in length.This is the N-terminal domain of the member proteins. The human gene is from C5orf34.


Pssm-ID: 464454  Cd Length: 146  Bit Score: 232.21  E-value: 2.37e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 165905617    9 MVLYEDDSVQVHYACGSTLQLSPCGSEFLFEKALPPSTHPLEQPERIRQRTHFVISNYREQLQRALDFRNSSATCPFLSE 88
Cdd:pfam15025   1 MVLYEDDSVEVHFSDGSRLQLSPCGSEFLFEKADPPSAHPLQPGERVRQRTRFAISRYKPLLAAALEFRNQYAERPYLPE 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 165905617   89 SIIPPERKKHIFIDFSEVEWPSLDRDDCIMYSESGVVKITSLDGHAYLCLPRSQHEFTVHFLCKVS 154
Cdd:pfam15025  81 EIIPSEKKKRLGSDISEAKWPSSSSSGLVTRGDGGSVTVSSEDGAAQLVLSPHQEEFTVEFLCKVS 146
DUF4520 pfam15016
Domain of unknown function (DUF4520); This family of proteins is found in eukaryotes. Proteins ...
 451-541 1.91e-37

Domain of unknown function (DUF4520); This family of proteins is found in eukaryotes. Proteins in this family are typically between 197 and 638 amino acids in length.This is the C-terminal domain of the member proteins.


Pssm-ID: 434393  Cd Length: 89  Bit Score: 134.00  E-value: 1.91e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 165905617  451 ILPVLLKESLIPGVGRFLAYSDDKVHAVFLDGVTVTLNWHLSSsaeKKQVDQGLSFGWCRLTFPDGQDQLIPTEHPGAYE 530
Cdd:pfam15016   1 MSPVVLEESTIPGIGRFTAYSDGRVHVHFDDRTILTLVWDFSS---GKTQVNRESTGWCKLLLPDGQQVLVRIEHPGHYE 77

                          90
                  ....*....|.
gi 165905617  531 RYVTSVISWCR 541
Cdd:pfam15016  78 RYVAAALEFCR 88
 
Name Accession Description Interval E-value
DUF4524 pfam15025
Domain of unknown function (DUF4524); This family of proteins is found in eukaryotes. Proteins ...
 9-154 2.37e-73

Domain of unknown function (DUF4524); This family of proteins is found in eukaryotes. Proteins in this family are typically between 197 and 638 amino acids in length.This is the N-terminal domain of the member proteins. The human gene is from C5orf34.


Pssm-ID: 464454  Cd Length: 146  Bit Score: 232.21  E-value: 2.37e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 165905617    9 MVLYEDDSVQVHYACGSTLQLSPCGSEFLFEKALPPSTHPLEQPERIRQRTHFVISNYREQLQRALDFRNSSATCPFLSE 88
Cdd:pfam15025   1 MVLYEDDSVEVHFSDGSRLQLSPCGSEFLFEKADPPSAHPLQPGERVRQRTRFAISRYKPLLAAALEFRNQYAERPYLPE 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 165905617   89 SIIPPERKKHIFIDFSEVEWPSLDRDDCIMYSESGVVKITSLDGHAYLCLPRSQHEFTVHFLCKVS 154
Cdd:pfam15025  81 EIIPSEKKKRLGSDISEAKWPSSSSSGLVTRGDGGSVTVSSEDGAAQLVLSPHQEEFTVEFLCKVS 146
DUF4520 pfam15016
Domain of unknown function (DUF4520); This family of proteins is found in eukaryotes. Proteins ...
 451-541 1.91e-37

Domain of unknown function (DUF4520); This family of proteins is found in eukaryotes. Proteins in this family are typically between 197 and 638 amino acids in length.This is the C-terminal domain of the member proteins.


Pssm-ID: 434393  Cd Length: 89  Bit Score: 134.00  E-value: 1.91e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 165905617  451 ILPVLLKESLIPGVGRFLAYSDDKVHAVFLDGVTVTLNWHLSSsaeKKQVDQGLSFGWCRLTFPDGQDQLIPTEHPGAYE 530
Cdd:pfam15016   1 MSPVVLEESTIPGIGRFTAYSDGRVHVHFDDRTILTLVWDFSS---GKTQVNRESTGWCKLLLPDGQQVLVRIEHPGHYE 77

                          90
                  ....*....|.
gi 165905617  531 RYVTSVISWCR 541
Cdd:pfam15016  78 RYVAAALEFCR 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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