|
Name |
Accession |
Description |
Interval |
E-value |
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
130-442 |
4.87e-10 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 61.68 E-value: 4.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 130 VSNSQLRQKISSLET-KLKASEEEK----QRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQaRYREL----QEKHKQEL 200
Cdd:pfam17380 284 VSERQQQEKFEKMEQeRLRQEKEEKarevERRRKLEEAEKARQAEMDRQAAIYAEQERMAME-RERELerirQEERKREL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 201 EDMRKaghEALSIIVDEYKALLQSSVKQQldaiEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQ 280
Cdd:pfam17380 363 ERIRQ---EEIAMEISRMRELERLQMERQ----QKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQR 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 281 QSQ----EQKESLEKCLQEEMQRNKEtLESAVKLEKEAMKdvitKAVGEERENLEKVHAEE-------RELWKTEHAR-D 348
Cdd:pfam17380 436 EVRrleeERAREMERVRLEEQERQQQ-VERLRQQEEERKR----KKLELEKEKRDRKRAEEqrrkileKELEERKQAMiE 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 349 QERVAEAIQAAVQEQQRMSQEAVKAAIVEEQRRSEKAMEEAvKRTRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQK 428
Cdd:pfam17380 511 EERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEER-RRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARA 589
|
330
....*....|....
gi 27532950 429 QLSAliATEPVDIE 442
Cdd:pfam17380 590 EYEA--TTPITTIK 601
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
175-414 |
8.52e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.02 E-value: 8.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 175 LKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHA 254
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 255 QHQRLLDVLDTEKELLREKIQEALTQQSQEQKESLEKCLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEERENLEKVH 334
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 335 AEERELWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKAAIVEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQR 414
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
133-414 |
3.40e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 3.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 133 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKgFLKEKEQDavsfQARYRELQEKHKQELEDMRKAGHEALS 212
Cdd:TIGR02169 705 DELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEE-DLSSLEQE----IENVKSELKELEARIEELEEDLHKLEE 779
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 213 IIVDEYKALLQSSVKQqldaIEKQYvSAIEKQAHRCEELLHAQHQRLLDvLDTEKELLREKIQEALTQQS--QEQKESLE 290
Cdd:TIGR02169 780 ALNDLEARLSHSRIPE----IQAEL-SKLEEEVSRIEARLREIEQKLNR-LTLEKEYLEKEIQELQEQRIdlKEQIKSIE 853
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 291 KcLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEEREnLEKVHAEERELwktehardQERVAEAIQAAVQEQQRMSQEA 370
Cdd:TIGR02169 854 K-EIENLNGKKEELEEELEELEAALRDLESRLGDLKKE-RDELEAQLREL--------ERKIEELEAQIEKKRKRLSELK 923
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 27532950 371 VKAAIVEEQrrsEKAMEEAVKrtrdELVEYVREQRRLDQVTRQR 414
Cdd:TIGR02169 924 AKLEALEEE---LSEIEDPKG----EDEEIPEEELSLEDVQAEL 960
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
143-413 |
6.06e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.98 E-value: 6.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 143 ETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYKA-- 220
Cdd:PTZ00121 1435 EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAde 1514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 221 LLQSSVKQQLDAIEKQyvsaieKQAHRCEELLHAQHQRLLDVLDTEKELLR--EKIQEALTQQSQEQKESLEKCLQEEMQ 298
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKA------EEAKKADEAKKAEEKKKADELKKAEELKKaeEKKKAEEAKKAEEDKNMALRKAEEAKK 1588
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 299 RNKETLESAVKL--EKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQE----RVAEAIQAAVQEQQ-RMSQEAV 371
Cdd:PTZ00121 1589 AEEARIEEVMKLyeEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEaeekKKAEELKKAEEENKiKAAEEAK 1668
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 27532950 372 KAAivEEQRRSEKAM--EEAVKRTRDELVEYVREQRRLDQVTRQ 413
Cdd:PTZ00121 1669 KAE--EDKKKAEEAKkaEEDEKKAAEALKKEAEEAKKAEELKKK 1710
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
130-442 |
4.87e-10 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 61.68 E-value: 4.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 130 VSNSQLRQKISSLET-KLKASEEEK----QRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQaRYREL----QEKHKQEL 200
Cdd:pfam17380 284 VSERQQQEKFEKMEQeRLRQEKEEKarevERRRKLEEAEKARQAEMDRQAAIYAEQERMAME-RERELerirQEERKREL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 201 EDMRKaghEALSIIVDEYKALLQSSVKQQldaiEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQ 280
Cdd:pfam17380 363 ERIRQ---EEIAMEISRMRELERLQMERQ----QKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQR 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 281 QSQ----EQKESLEKCLQEEMQRNKEtLESAVKLEKEAMKdvitKAVGEERENLEKVHAEE-------RELWKTEHAR-D 348
Cdd:pfam17380 436 EVRrleeERAREMERVRLEEQERQQQ-VERLRQQEEERKR----KKLELEKEKRDRKRAEEqrrkileKELEERKQAMiE 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 349 QERVAEAIQAAVQEQQRMSQEAVKAAIVEEQRRSEKAMEEAvKRTRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQK 428
Cdd:pfam17380 511 EERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEER-RRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARA 589
|
330
....*....|....
gi 27532950 429 QLSAliATEPVDIE 442
Cdd:pfam17380 590 EYEA--TTPITTIK 601
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
175-414 |
8.52e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.02 E-value: 8.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 175 LKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHA 254
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 255 QHQRLLDVLDTEKELLREKIQEALTQQSQEQKESLEKCLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEERENLEKVH 334
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 335 AEERELWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKAAIVEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQR 414
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
134-396 |
2.36e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 2.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 134 QLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGfLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSI 213
Cdd:COG1196 257 ELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE-LARLEQDIARLEERRRELEERLEELEEELAELEEELEEL 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 214 IVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQQSQEQKESLEKCL 293
Cdd:COG1196 336 EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLER 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 294 QEEMQRNKETLESAvKLEKEAMKDVITKAVGEERENLEKVHAEERELwKTEHARDQERVAEAIQAAVQEQQRMSQEAVKA 373
Cdd:COG1196 416 LERLEEELEELEEA-LAELEEEEEEEEEALEEAAEEEAELEEEEEAL-LELLAELLEEAALLEAALAELLEELAEAAARL 493
|
250 260
....*....|....*....|...
gi 27532950 374 AIVEEQRRSEKAMEEAVKRTRDE 396
Cdd:COG1196 494 LLLLEAEADYEGFLEGVKAALLL 516
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
133-414 |
3.40e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 3.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 133 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKgFLKEKEQDavsfQARYRELQEKHKQELEDMRKAGHEALS 212
Cdd:TIGR02169 705 DELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEE-DLSSLEQE----IENVKSELKELEARIEELEEDLHKLEE 779
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 213 IIVDEYKALLQSSVKQqldaIEKQYvSAIEKQAHRCEELLHAQHQRLLDvLDTEKELLREKIQEALTQQS--QEQKESLE 290
Cdd:TIGR02169 780 ALNDLEARLSHSRIPE----IQAEL-SKLEEEVSRIEARLREIEQKLNR-LTLEKEYLEKEIQELQEQRIdlKEQIKSIE 853
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 291 KcLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEEREnLEKVHAEERELwktehardQERVAEAIQAAVQEQQRMSQEA 370
Cdd:TIGR02169 854 K-EIENLNGKKEELEEELEELEAALRDLESRLGDLKKE-RDELEAQLREL--------ERKIEELEAQIEKKRKRLSELK 923
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 27532950 371 VKAAIVEEQrrsEKAMEEAVKrtrdELVEYVREQRRLDQVTRQR 414
Cdd:TIGR02169 924 AKLEALEEE---LSEIEDPKG----EDEEIPEEELSLEDVQAEL 960
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
134-406 |
2.84e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.94 E-value: 2.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 134 QLRQKISSLETKLKASEEEKQRIKKDVESLmEKHSVLEKGFLKEKEQDAVSFQARYRELQEKHKQELEDMRkaghealsi 213
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAEL-EAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA--------- 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 214 ivdeYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQrlLDVLDTEKELLREKIQEALTQQSQEQKESLEKcl 293
Cdd:COG1196 306 ----RLEERRRELEERLEELEEELAELEEELEELEEELEELEEE--LEEAEEELEEAEAELAEAEEALLEAEAELAEA-- 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 294 QEEMQRNKETLESAVKLEKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKA 373
Cdd:COG1196 378 EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE 457
|
250 260 270
....*....|....*....|....*....|...
gi 27532950 374 AIVEEQRRSEKAMEEAVKRTRDELVEYVREQRR 406
Cdd:COG1196 458 EEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
143-413 |
6.06e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.98 E-value: 6.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 143 ETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYKA-- 220
Cdd:PTZ00121 1435 EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAde 1514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 221 LLQSSVKQQLDAIEKQyvsaieKQAHRCEELLHAQHQRLLDVLDTEKELLR--EKIQEALTQQSQEQKESLEKCLQEEMQ 298
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKA------EEAKKADEAKKAEEKKKADELKKAEELKKaeEKKKAEEAKKAEEDKNMALRKAEEAKK 1588
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 299 RNKETLESAVKL--EKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQE----RVAEAIQAAVQEQQ-RMSQEAV 371
Cdd:PTZ00121 1589 AEEARIEEVMKLyeEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEaeekKKAEELKKAEEENKiKAAEEAK 1668
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 27532950 372 KAAivEEQRRSEKAM--EEAVKRTRDELVEYVREQRRLDQVTRQ 413
Cdd:PTZ00121 1669 KAE--EDKKKAEEAKkaEEDEKKAAEALKKEAEEAKKAEELKKK 1710
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
133-374 |
1.53e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 133 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKgFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALS 212
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALAR-RIRALEQELAALEAELAELEKEIAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 213 IIVDEYKALLQSSVKQQLDAiekQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELlrekiqEALTQQSQEQKESLEKc 292
Cdd:COG4942 109 LLRALYRLGRQPPLALLLSP---EDFLDAVRRLQYLKYLAPARREQAEELRADLAEL------AALRAELEAERAELEA- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 293 LQEEMQRNKETLESAVKlEKEAMKDVITKAVGEERENLEKVHAEERELwktehardQERVAEAIQAAVQEQQRMSQEAVK 372
Cdd:COG4942 179 LLAELEEERAALEALKA-ERQKLLARLEKELAELAAELAELQQEAEEL--------EALIARLEAEAAAAAERTPAAGFA 249
|
..
gi 27532950 373 AA 374
Cdd:COG4942 250 AL 251
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
131-340 |
3.05e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 3.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 131 SNSQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSvlekgfLKEKEQDavsfqaRYRELQEKHKQELEDMRKAGHeA 210
Cdd:TIGR04523 385 EIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKE------LLEKEIE------RLKETIIKNNSEIKDLTNQDS-V 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 211 LSIIVDEYKAlLQSSVKQQLDAIEKQYVSAIEKQAHRCEELlhAQHQRLLDVLDTEKELLREKIQEaLTQQSQEQKESLE 290
Cdd:TIGR04523 452 KELIIKNLDN-TRESLETQLKVLSRSINKIKQNLEQKQKEL--KSKEKELKKLNEEKKELEEKVKD-LTKKISSLKEKIE 527
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 27532950 291 KCLQEEMQRNKETLESAVKLEK---EAMKDVITKAVGEERENLEKVHAEEREL 340
Cdd:TIGR04523 528 KLESEKKEKESKISDLEDELNKddfELKKENLEKEIDEKNKEIEELKQTQKSL 580
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
134-370 |
7.98e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 7.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 134 QLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQDAV---SFQARYRELQEKHKQELEDMRK--AGH 208
Cdd:pfam12128 298 QWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEqlpSWQSELENLEERLKALTGKHQDvtAKY 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 209 EALSIIVDEYKALLQSSVKQQLDAIEKqyvsAIEKQAHRCEELLHAQHQRLldvldtekellREKIQEALTQQSQEQKES 288
Cdd:pfam12128 378 NRRRSKIKEQNNRDIAGIKDKLAKIRE----ARDRQLAVAEDDLQALESEL-----------REQLEAGKLEFNEEEYRL 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 289 LEKCLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQERVA-EAIQAAVQEQQRMS 367
Cdd:pfam12128 443 KSRLGELKLRLNQATATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEAlRQASRRLEERQSAL 522
|
...
gi 27532950 368 QEA 370
Cdd:pfam12128 523 DEL 525
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
181-414 |
1.32e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.67 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 181 DAVSFQARYRELQEKHKQELEDMRKAgHEALSIIVDEykallqssVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQRLL 260
Cdd:TIGR02169 160 DEIAGVAEFDRKKEKALEELEEVEEN-IERLDLIIDE--------KRQQLERLRREREKAERYQALLKEKREYEGYELLK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 261 DVLDTEKELlrekiqEALTQQSQEQKESLEKcLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEE---RENLEKVHAEE 337
Cdd:TIGR02169 231 EKEALERQK------EAIERQLASLEEELEK-LTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlrvKEKIGELEAEI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 338 RELWKT--EHARDQERVAEAIQAAVQE--QQRMSQEAVKAAIVEEQRRSEKAMEE--------------------AVKRT 393
Cdd:TIGR02169 304 ASLERSiaEKERELEDAEERLAKLEAEidKLLAEIEELEREIEEERKRRDKLTEEyaelkeeledlraeleevdkEFAET 383
|
250 260
....*....|....*....|.
gi 27532950 394 RDELVEYvreQRRLDQVTRQR 414
Cdd:TIGR02169 384 RDELKDY---REKLEKLKREI 401
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
133-392 |
1.57e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.16 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 133 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGfLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALS 212
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEE-LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 213 IIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLRE---------KIQEALTQQSQ 283
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEeeeeeealeEAAEEEAELEE 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 284 EQKESLEKCLQEEMQRNKETLESAVKLEKEAMKdvitKAVGEERENLEKVHAEERELWKTEHARD-QERVAEAIQAAVQE 362
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEA----AARLLLLLEAEADYEGFLEGVKAALLLAgLRGLAGAVAVLIGV 532
|
250 260 270
....*....|....*....|....*....|
gi 27532950 363 QQRMSQEAVKAAIVEEQRRSEKAMEEAVKR 392
Cdd:COG1196 533 EAAYEAALEAALAAALQNIVVEDDEVAAAA 562
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
143-409 |
2.51e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 2.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 143 ETKLKASEEEK-QRIKKDVESLMEKHSVLEKGFLKEKEQDAVS---FQARYRELQEKHKQELEDMRKAGH-----EALSI 213
Cdd:PTZ00121 1306 EAKKKAEEAKKaDEAKKKAEEAKKKADAAKKKAEEAKKAAEAAkaeAEAAADEAEAAEEKAEAAEKKKEEakkkaDAAKK 1385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 214 IVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLH-AQHQRLLDVLDTEKEllREKIQEALTQQSQEQKESLEKC 292
Cdd:PTZ00121 1386 KAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKkAEEKKKADEAKKKAE--EAKKADEAKKKAEEAKKAEEAK 1463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 293 LQEEMQRNKETLESavKLEKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQERVAEAIQAAVQEQQRMSQEAVK 372
Cdd:PTZ00121 1464 KKAEEAKKADEAKK--KAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKK 1541
|
250 260 270
....*....|....*....|....*....|....*..
gi 27532950 373 AaivEEQRRSEKaMEEAVKRTRDELVEYVREQRRLDQ 409
Cdd:PTZ00121 1542 A---EEKKKADE-LKKAEELKKAEEKKKAEEAKKAEE 1574
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
134-309 |
7.57e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.97 E-value: 7.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 134 QLRQKISSLETKLKASEEEKQRIKKDVESLMEKhsvlekgfLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSI 213
Cdd:TIGR02168 327 ELESKLDELAEELAELEEKLEELKEELESLEAE--------LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 214 -----IVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCE----------ELLHAQHQRLLDVLDTEKELLREKIQEAL 278
Cdd:TIGR02168 399 nneieRLEARLERLEDRRERLQQEIEELLKKLEEAELKELQaeleeleeelEELQEELERLEEALEELREELEEAEQALD 478
|
170 180 190
....*....|....*....|....*....|.
gi 27532950 279 TQQSQEQKESLEKCLQEEMQRNKETLESAVK 309
Cdd:TIGR02168 479 AAERELAQLQARLDSLERLQENLEGFSEGVK 509
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
143-408 |
1.05e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 143 ETKLKASEEEKQRIKKDVESLmEKHSVLEKGFLKEKEQDAVSFQARyRELQEKHKQELEDMRKAGHEALSIIVDEYKALL 222
Cdd:PTZ00121 1531 EEAKKADEAKKAEEKKKADEL-KKAEELKKAEEKKKAEEAKKAEED-KNMALRKAEEAKKAEEARIEEVMKLYEEEKKMK 1608
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 223 QSSVKQQLDA-IEKQYVSAIEKQAHRCEELL--HAQHQRLLDVLDTEKELLREKIQEALTQQSQEQKESLEKCLQEEMQR 299
Cdd:PTZ00121 1609 AEEAKKAEEAkIKAEELKKAEEEKKKVEQLKkkEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEK 1688
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 300 NKEtlESAVKLEKEAMK-DVITKAVGEERENLEKVH-AEERELWKTEHARDQE----RVAEAIQAAVQEQQRMSQ-EAVK 372
Cdd:PTZ00121 1689 KAA--EALKKEAEEAKKaEELKKKEAEEKKKAEELKkAEEENKIKAEEAKKEAeedkKKAEEAKKDEEEKKKIAHlKKEE 1766
|
250 260 270
....*....|....*....|....*....|....*.
gi 27532950 373 AAIVEEQRRSEKAMEEAVKRTRDELVEYVREQRRLD 408
Cdd:PTZ00121 1767 EKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKD 1802
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
143-429 |
1.07e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 143 ETKLKASEEEK-QRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAghEALSIIVDEYK-- 219
Cdd:PTZ00121 1382 AAKKKAEEKKKaDEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKA--DEAKKKAEEAKka 1459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 220 --ALLQSSVKQQLD-----AIEKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQQSQEQKESLEKC 292
Cdd:PTZ00121 1460 eeAKKKAEEAKKADeakkkAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEA 1539
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 293 LQEEMQRNKETLESAVKLEK-EAMKDVITKAVGEERENLEKVHAEerELWKTEHARDQErvaeaIQAAVQEQQRMSQEAV 371
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKKaEEKKKAEEAKKAEEDKNMALRKAE--EAKKAEEARIEE-----VMKLYEEEKKMKAEEA 1612
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 27532950 372 KAAIVEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQKQ 429
Cdd:PTZ00121 1613 KKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKA 1670
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
143-404 |
1.44e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.28 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 143 ETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQdaVSFQARYRELQEKHKQElEDMRKAGHEAlsiivdeykALL 222
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEE--LKKAEEKKKAEEAKKAE-EDKNMALRKA---------EEA 1586
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 223 QSSVKQQLDAIEKQYVsaiEKQAHRCEELLHAQHQRLlDVLDTEKELLREKIQEALTQQSQEQKESLEKCLQEEMQRNKE 302
Cdd:PTZ00121 1587 KKAEEARIEEVMKLYE---EEKKMKAEEAKKAEEAKI-KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK 1662
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 303 TLESAVKLEKEAMK-DVITKAVGEERENLEKVHAEERELWKTEHARDQE----RVAEAIQAAVQEQQRMSQEAVKaaivE 377
Cdd:PTZ00121 1663 AAEEAKKAEEDKKKaEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEaeekKKAEELKKAEEENKIKAEEAKK----E 1738
|
250 260
....*....|....*....|....*..
gi 27532950 378 EQRRSEKAMEEAVKRTRDELVEYVREQ 404
Cdd:PTZ00121 1739 AEEDKKKAEEAKKDEEEKKKIAHLKKE 1765
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
136-307 |
2.09e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 136 RQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGF--------LKEKEQDAVSFQARYRELQekhkQELEDMRKAG 207
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERRealqrlaeYSWDEIDVASAEREIAELE----AELERLDASS 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 208 HE--ALSIIVDEYKALLQSSVKQQLDAIEKQyvSAIEKQAHRCEELLHAQHQRLLDVLDTEKELLREKIQEALTQQSQEQ 285
Cdd:COG4913 685 DDlaALEEQLEELEAELEELEEELDELKGEI--GRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDA 762
|
170 180
....*....|....*....|...
gi 27532950 286 KES-LEKCLQEEMQRNKETLESA 307
Cdd:COG4913 763 VEReLRENLEERIDALRARLNRA 785
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
133-374 |
2.37e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.20 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 133 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGfLKEKEQDAVSFQARYRELQEKHKQELEDMRKagheals 212
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-LEALQAEIDKLQAEIAEAEAEIEERREELGE------- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 213 IIVDEYKALLQSSVKQQL-------DAIEKqyVSAIEKqahrceelLHAQHQRLLDVLDTEKELLREKIQEAltqqsQEQ 285
Cdd:COG3883 91 RARALYRSGGSVSYLDVLlgsesfsDFLDR--LSALSK--------IADADADLLEELKADKAELEAKKAEL-----EAK 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 286 KESLEKcLQEEMQRNKETLESAVKlEKEAMKDVITKAVGEERENLEKVHAEERELWKTEHARDQERVAEAIQAAVQEQQR 365
Cdd:COG3883 156 LAELEA-LKAELEAAKAELEAQQA-EQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
....*....
gi 27532950 366 MSQEAVKAA 374
Cdd:COG3883 234 AAAAAAAAA 242
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
133-410 |
4.61e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 39.28 E-value: 4.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 133 SQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEK--GFLKEKEQDAVSFQARYRELqEKHKQELEDMRKAGHEa 210
Cdd:PRK03918 210 NEISSELPELREELEKLEKEVKELEELKEEIEELEKELESleGSKRKLEEKIRELEERIEEL-KKEIEELEEKVKELKE- 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 211 LSIIVDEYKALLQSSVKQqldaieKQYVSAIEKQAHRCEELLHAQHQRLLDVLDTEKEL--LREKIQEaLTQQSQEQKES 288
Cdd:PRK03918 288 LKEKAEEYIKLSEFYEEY------LDELREIEKRLSRLEEEINGIEERIKELEEKEERLeeLKKKLKE-LEKRLEELEER 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 289 LE-----KCLQEEMQRNKETLESAVKLEKEAMKDVITKAVGEERENLEKVHAEERELwKTEHARDQERVAEAIQAAVQEQ 363
Cdd:PRK03918 361 HElyeeaKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGEL-KKEIKELKKAIEELKKAKGKCP 439
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 27532950 364 --QRMSQEAVKAAIVEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQV 410
Cdd:PRK03918 440 vcGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKV 488
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
113-307 |
4.62e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 39.56 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 113 SHGALALEDEPEgpgvhVSNSQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKGFLKEKEQDAVSFQARYREL 192
Cdd:PRK04863 825 SHLAVAFEADPE-----AELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLADETLADRVEEI 899
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 193 QEKHKQELEDMRK-AGHEALSIIVDEYKALLQSSvKQQLDAIEKQYVSAIEKQA-------------HRCEELLHAQHQR 258
Cdd:PRK04863 900 REQLDEAEEAKRFvQQHGNALAQLEPIVSVLQSD-PEQFEQLKQDYQQAQQTQRdakqqafaltevvQRRAHFSYEDAAE 978
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 27532950 259 LLDVLDTEKELLREKIQEALTQQSqEQKESLeKCLQEEMQRNKETLESA 307
Cdd:PRK04863 979 MLAKNSDLNEKLRQRLEQAEQERT-RAREQL-RQAQAQLAQYNQVLASL 1025
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
191-409 |
4.88e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 38.98 E-value: 4.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 191 ELQEKHKQELEDMRKAGHEALSIIVDEYKAllQSSVKQQLDAIEKQyVSAIEKQAHRCEELLHAQHQRLLDVldtekell 270
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKE--EKALLKQLAALERR-IAALARRIRALEQELAALEAELAEL-------- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27532950 271 rEKIQEALTQQSQEQKESLEKCLQEeMQRNKETLESAVKLEKEAMKDVITKA------VGEERENLEKVHAEERELWKTE 344
Cdd:COG4942 89 -EKEIAELRAELEAQKEELAELLRA-LYRLGRQPPLALLLSPEDFLDAVRRLqylkylAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27532950 345 HARDQERVAEAIQAAVQEQQRMSQEAVKAaiveEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQ 409
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKA----ERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| |
