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Conserved domains on  [gi|13162347|ref|NP_077067|]
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NADPH:adrenodoxin oxidoreductase, mitochondrial precursor [Rattus norvegicus]

Protein Classification

ferredoxin--NADP reductase domain-containing protein( domain architecture ID 1000996)

ferredoxin--NADP reductase domain-containing protein may serve as an electron transfer protein and supply electrons to P450 systems

EC:  1.18.1.-
Gene Ontology:  GO:0004324|GO:0050661|GO:0071949
PubMed:  10998235
SCOP:  4000129

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PLN02852 super family cl30539
ferredoxin-NADP+ reductase
20-489 0e+00

ferredoxin-NADP+ reductase


The actual alignment was detected with superfamily member PLN02852:

Pssm-ID: 357415  Cd Length: 491  Bit Score: 536.97  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   20 LPSRSTPTPGFCKKFSTQETTPQ--ICVVGSGPAGFYTAQHLLKHHTRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVIN 97
Cdd:PLN02852   4 LRARTWLSRALSFSNSSSSTSEPlhVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTN 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   98 TFTQTARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYNGLPENQKLAPDL 177
Cdd:PLN02852  84 QFSRVATDDRVSFFGNVTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPDL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  178 -SCDTAVILGQGNVALDVARILLTPPEHLEKTDITEVALGVLRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTQPI 256
Cdd:PLN02852 164 kSSDTAVVLGQGNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVR 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  257 LDPSDFL--GLQDRIKDVPRPRKRLTELLLRTATEKPGVEEAARRALAsrawgLRFFRSPQQVLPTPDG-RRVAGIRLAV 333
Cdd:PLN02852 244 IKEADLTlsPEDEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELH-----FVFFRNPTRFLDSGDGnGHVAGVKLER 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  334 TRLEGVGESTR--AVPTGDVEDLPCGLLLSSVGYKSRPIDpSVPFDPKLGIIPNTEGRVVNA-------PGLYCSGWVKR 404
Cdd:PLN02852 319 TVLEGAAGSGKqvAVGTGEFEDLPCGLVLKSIGYKSLPVD-GLPFDHKRGVVPNVHGRVLSSasgadtePGLYVVGWLKR 397
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  405 GPTGVITTTMTDSFLTSQVLLKDLKAGLLP---SGPRPGYTAIQALLSDRGVRPVSFSDWEKLDAEEVARGQGTGKPREK 481
Cdd:PLN02852 398 GPTGIIGTNLTCAEETVASIAEDLEQGRLRgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREK 477

                 ....*...
gi 13162347  482 LVDRREML 489
Cdd:PLN02852 478 ITSIEEML 485
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
20-489 0e+00

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 536.97  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   20 LPSRSTPTPGFCKKFSTQETTPQ--ICVVGSGPAGFYTAQHLLKHHTRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVIN 97
Cdd:PLN02852   4 LRARTWLSRALSFSNSSSSTSEPlhVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTN 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   98 TFTQTARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYNGLPENQKLAPDL 177
Cdd:PLN02852  84 QFSRVATDDRVSFFGNVTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPDL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  178 -SCDTAVILGQGNVALDVARILLTPPEHLEKTDITEVALGVLRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTQPI 256
Cdd:PLN02852 164 kSSDTAVVLGQGNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVR 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  257 LDPSDFL--GLQDRIKDVPRPRKRLTELLLRTATEKPGVEEAARRALAsrawgLRFFRSPQQVLPTPDG-RRVAGIRLAV 333
Cdd:PLN02852 244 IKEADLTlsPEDEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELH-----FVFFRNPTRFLDSGDGnGHVAGVKLER 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  334 TRLEGVGESTR--AVPTGDVEDLPCGLLLSSVGYKSRPIDpSVPFDPKLGIIPNTEGRVVNA-------PGLYCSGWVKR 404
Cdd:PLN02852 319 TVLEGAAGSGKqvAVGTGEFEDLPCGLVLKSIGYKSLPVD-GLPFDHKRGVVPNVHGRVLSSasgadtePGLYVVGWLKR 397
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  405 GPTGVITTTMTDSFLTSQVLLKDLKAGLLP---SGPRPGYTAIQALLSDRGVRPVSFSDWEKLDAEEVARGQGTGKPREK 481
Cdd:PLN02852 398 GPTGIIGTNLTCAEETVASIAEDLEQGRLRgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREK 477

                 ....*...
gi 13162347  482 LVDRREML 489
Cdd:PLN02852 478 ITSIEEML 485
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
43-411 2.82e-41

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 152.98  E-value: 2.82e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  43 ICVVGSGPAGFYTAQHLLKH-HTrahVDIYEKQLVPFGLVRFGVaPDHPEVKNVINtftqtARSDRCA-----FRGNVVV 116
Cdd:COG0493 124 VAVVGSGPAGLAAAYQLARAgHE---VTVFEALDKPGGLLRYGI-PEFRLPKDVLD-----REIELIEalgveFRTNVEV 194
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347 117 GRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYNGlpENQKLAPDLSCDTAVILGQGNVALDVAR 196
Cdd:COG0493 195 GKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNL--GEAPDTILAVGKRVVVIGGGNTAMDCAR 272
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347 197 ILltppehlektditevalgvLRQSrVKTVWIVGRrgplqvaftikelremiqlpgtqpildpsdflglqdrikdvpRPR 276
Cdd:COG0493 273 TA-------------------LRLG-AESVTIVYR------------------------------------------RTR 290
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347 277 KRLTELLLRT--ATEKpGVEeaarralasrawgLRFFRSPQQVLPTPDGrRVAGIRLAVTRLEGVGESTRAVP---TGDV 351
Cdd:COG0493 291 EEMPASKEEVeeALEE-GVE-------------FLFLVAPVEIIGDENG-RVTGLECVRMELGEPDESGRRRPvpiEGSE 355
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 13162347 352 EDLPCGLLLSSVGYKSRPI----DPSVPFDPKLGIIPNTEGRVVNAPGLYCSGWVKRGPTGVIT 411
Cdd:COG0493 356 FTLPADLVILAIGQTPDPSgleeELGLELDKRGTIVVDEETYQTSLPGVFAGGDAVRGPSLVVW 419
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
20-489 0e+00

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 536.97  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   20 LPSRSTPTPGFCKKFSTQETTPQ--ICVVGSGPAGFYTAQHLLKHHTRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVIN 97
Cdd:PLN02852   4 LRARTWLSRALSFSNSSSSTSEPlhVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTN 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   98 TFTQTARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYNGLPENQKLAPDL 177
Cdd:PLN02852  84 QFSRVATDDRVSFFGNVTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPDL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  178 -SCDTAVILGQGNVALDVARILLTPPEHLEKTDITEVALGVLRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTQPI 256
Cdd:PLN02852 164 kSSDTAVVLGQGNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVR 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  257 LDPSDFL--GLQDRIKDVPRPRKRLTELLLRTATEKPGVEEAARRALAsrawgLRFFRSPQQVLPTPDG-RRVAGIRLAV 333
Cdd:PLN02852 244 IKEADLTlsPEDEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELH-----FVFFRNPTRFLDSGDGnGHVAGVKLER 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  334 TRLEGVGESTR--AVPTGDVEDLPCGLLLSSVGYKSRPIDpSVPFDPKLGIIPNTEGRVVNA-------PGLYCSGWVKR 404
Cdd:PLN02852 319 TVLEGAAGSGKqvAVGTGEFEDLPCGLVLKSIGYKSLPVD-GLPFDHKRGVVPNVHGRVLSSasgadtePGLYVVGWLKR 397
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  405 GPTGVITTTMTDSFLTSQVLLKDLKAGLLP---SGPRPGYTAIQALLSDRGVRPVSFSDWEKLDAEEVARGQGTGKPREK 481
Cdd:PLN02852 398 GPTGIIGTNLTCAEETVASIAEDLEQGRLRgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREK 477

                 ....*...
gi 13162347  482 LVDRREML 489
Cdd:PLN02852 478 ITSIEEML 485
PTZ00188 PTZ00188
adrenodoxin reductase; Provisional
32-492 9.51e-52

adrenodoxin reductase; Provisional


Pssm-ID: 240308  Cd Length: 506  Bit Score: 183.16  E-value: 9.51e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   32 KKFSTQETTP-QICVVGSGPAGFYTAQHLLKHHtRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAF 110
Cdd:PTZ00188  30 KCFFTNEAKPfKVGIIGAGPSALYCCKHLLKHE-RVKVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLSPNYRF 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  111 RGNVVVGRDVSVPELREAYHAVVLSYGA---------EDHQPLEIPGEELP----GVVSARAFVGWYNGLPEnqklapDL 177
Cdd:PTZ00188 109 FGNVHVGVDLKMEELRNHYNCVIFCCGAsevsipigqQDEDKAVSGGETNPrkqnGIFHARDLIYFYNNMYN------DV 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  178 SC-------------DTAVILGQGNVALDVARILLTPPEHLEKTDITEVALGVLRQSRVKTVWIVGRRGPLQVAFTIKEL 244
Cdd:PTZ00188 183 RCkavdnylnsfenfTTSIIIGNGNVSLDIARILIKSPDDLSKTDISSDYLKVIKRHNIKHIYIVGRRGFWQSSFTNAEL 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  245 REMIQLPGTQPILDPSDFlGLQDRIK---DVPRPRKRLTELLLRTATEKPGVEEAARRALASRAWGLRFFRSPQQVLPTP 321
Cdd:PTZ00188 263 RELISLENTKVILSKKNY-DLCCHLKsdeENTNMKKRQHEIFQKMVKNYEEVEKNKEFYKTYKIIEFIFYFEIRQIRPID 341
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  322 DGRRvaGIRLAVTRleGVGESTRAVPTGDVEDLPcgLLLSSVGYKSRPIDPSVpFDPKLGIIPNTEGRvvNAPGLYCSGW 401
Cdd:PTZ00188 342 GAMK--NVELELNK--NVPMSFSSFKENKVLVTP--LVIFATGFKKSNFAENL-YNQSVQMFKEDIGQ--HKFAIFKAGW 412
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  402 VKRGPTGVITTTMTDSFLTSQVLLKDLKAGLLPSGprpgyTAIQALLSDRGVRPVSFSDWEKLDAEEVARGQGTGKPREK 481
Cdd:PTZ00188 413 FDKGPKGNIASQILNSKNSTHLVLNFLQKVDIFFD-----NDISSLLKEKQIPYVSFDDWTYLHQLEKQMGAQQNKIAQK 487
                        490
                 ....*....|.
gi 13162347  482 LVDRREMLQLL 492
Cdd:PTZ00188 488 FSQTGEVLRIL 498
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
43-411 2.82e-41

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 152.98  E-value: 2.82e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  43 ICVVGSGPAGFYTAQHLLKH-HTrahVDIYEKQLVPFGLVRFGVaPDHPEVKNVINtftqtARSDRCA-----FRGNVVV 116
Cdd:COG0493 124 VAVVGSGPAGLAAAYQLARAgHE---VTVFEALDKPGGLLRYGI-PEFRLPKDVLD-----REIELIEalgveFRTNVEV 194
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347 117 GRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYNGlpENQKLAPDLSCDTAVILGQGNVALDVAR 196
Cdd:COG0493 195 GKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNL--GEAPDTILAVGKRVVVIGGGNTAMDCAR 272
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347 197 ILltppehlektditevalgvLRQSrVKTVWIVGRrgplqvaftikelremiqlpgtqpildpsdflglqdrikdvpRPR 276
Cdd:COG0493 273 TA-------------------LRLG-AESVTIVYR------------------------------------------RTR 290
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347 277 KRLTELLLRT--ATEKpGVEeaarralasrawgLRFFRSPQQVLPTPDGrRVAGIRLAVTRLEGVGESTRAVP---TGDV 351
Cdd:COG0493 291 EEMPASKEEVeeALEE-GVE-------------FLFLVAPVEIIGDENG-RVTGLECVRMELGEPDESGRRRPvpiEGSE 355
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 13162347 352 EDLPCGLLLSSVGYKSRPI----DPSVPFDPKLGIIPNTEGRVVNAPGLYCSGWVKRGPTGVIT 411
Cdd:COG0493 356 FTLPADLVILAIGQTPDPSgleeELGLELDKRGTIVVDEETYQTSLPGVFAGGDAVRGPSLVVW 419
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
43-405 4.51e-22

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 98.71  E-value: 4.51e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   43 ICVVGSGPAGFYTAQHLLKH-HTrahVDIYEKQLVPFGLVRFGVapdhPE---VKNVINTFTQTARSDRCAFRGNVVVGR 118
Cdd:PRK11749 143 VAVIGAGPAGLTAAHRLARKgYD---VTIFEARDKAGGLLRYGI----PEfrlPKDIVDREVERLLKLGVEIRTNTEVGR 215
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  119 DVSVPELREAYHAVVLSYGAedHQP--LEIPGEELPGVVSARAFVgwynglpENQKLAPDLSCDTA----VILGQGNVAL 192
Cdd:PRK11749 216 DITLDELRAGYDAVFIGTGA--GLPrfLGIPGENLGGVYSAVDFL-------TRVNQAVADYDLPVgkrvVVIGGGNTAM 286
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  193 DVARilltppehlektdiTEVALGvlrqsrVKTVWIVGRRGplqvaftiKElrEMiqlPGtqpildpsdflglqdrikdv 272
Cdd:PRK11749 287 DAAR--------------TAKRLG------AESVTIVYRRG--------RE--EM---PA-------------------- 313
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  273 prpRKRLTELllrtATEKpGVEeaarralasrawgLRFFRSPQQVLptPDGRRVAGIRLAVTRLEGVGES-TRAVP-TGD 350
Cdd:PRK11749 314 ---SEEEVEH----AKEE-GVE-------------FEWLAAPVEIL--GDEGRVTGVEFVRMELGEPDASgRRRVPiEGS 370
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 13162347  351 VEDLPCGLLLSSVGYKSRPIDPSVPfdPKLGIipNTEGRVV--------NAPGLYCSGWVKRG 405
Cdd:PRK11749 371 EFTLPADLVIKAIGQTPNPLILSTT--PGLEL--NRWGTIIaddetgrtSLPGVFAGGDIVTG 429
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
38-199 1.98e-17

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 85.17  E-value: 1.98e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   38 ETTPQICVVGSGPAGFYTAQHLLKhhtRAH-VDIYEKQLVPFGLVRFGVaPDH--PEvkNVINTFTQTARSDRCAFRGNV 114
Cdd:PRK12814 191 KSGKKVAIIGAGPAGLTAAYYLLR---KGHdVTIFDANEQAGGMMRYGI-PRFrlPE--SVIDADIAPLRAMGAEFRFNT 264
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  115 VVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVgwyNGLPENQKLAPDLScdtAVILGQGNVALDV 194
Cdd:PRK12814 265 VFGRDITLEELQKEFDAVLLAVGAQKASKMGIPGEELPGVISGIDFL---RNVALGTALHPGKK---VVVIGGGNTAIDA 338

                 ....*
gi 13162347  195 ARILL 199
Cdd:PRK12814 339 ARTAL 343
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
43-196 2.60e-16

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 81.46  E-value: 2.60e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   43 ICVVGSGPAGFYTAQHL-LKHHtraHVDIYEKQLVPFGLVRFGVaPDH--P------EVKNVINTFTQTarsdrcafRGN 113
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLrRMGH---AVTIFEAGPKLGGMMRYGI-PAYrlPrevldaEIQRILDLGVEV--------RLG 207
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  114 VVVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYNglpenqKLAPDLSCDTAVILGQGNVALD 193
Cdd:PRK12771 208 VRVGEDITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVG------EGEPPFLGKRVVVIGGGNTAMD 281

                 ...
gi 13162347  194 VAR 196
Cdd:PRK12771 282 AAR 284
gltD PRK12810
glutamate synthase subunit beta; Reviewed
45-172 4.94e-15

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 77.13  E-value: 4.94e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   45 VVGSGPAGFYTAQHLlkhhTRA-H-VDIYEKQLVPFGLVRFGVaPDHPEVKNVIntftqtarsDR---------CAFRGN 113
Cdd:PRK12810 148 VVGSGPAGLAAADQL----ARAgHkVTVFERADRIGGLLRYGI-PDFKLEKEVI---------DRrielmeaegIEFRTN 213
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 13162347  114 VVVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFvgwyngLPENQK 172
Cdd:PRK12810 214 VEVGKDITAEELLAEYDAVFLGTGAYKPRDLGIPGRDLDGVHFAMDF------LIQNTR 266
PRK12775 PRK12775
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ...
26-410 8.70e-14

putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional


Pssm-ID: 183738 [Multi-domain]  Cd Length: 1006  Bit Score: 74.21  E-value: 8.70e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347    26 PTPGFCKKFStqETTPQICVVGSGPAGFYTAQHLLKHHtrAHVDIYEKQLVPFGLVRFGVaPDHPEVKNVINTFTQTARS 105
Cdd:PRK12775  418 AKPVKPPRFS--KKLGKVAICGSGPAGLAAAADLVKYG--VDVTVYEALHVVGGVLQYGI-PSFRLPRDIIDREVQRLVD 492
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   106 DRCAFRGNVVVGRDVSVPEL--REAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYNGLPENQ---KLAPDLSCD 180
Cdd:PRK12775  493 IGVKIETNKVIGKTFTVPQLmnDKGFDAVFLGVGAGAPTFLGIPGEFAGQVYSANEFLTRVNLMGGDKfpfLDTPISLGK 572
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   181 TAVILGQGNVALDVARilltppehlektditevalgVLRQSRVKTVWIVGRRGPLQVAFTIKELREmiqlpgtqpildps 260
Cdd:PRK12775  573 SVVVIGAGNTAMDCLR--------------------VAKRLGAPTVRCVYRRSEAEAPARIEEIRH-------------- 618
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   261 dflglqdrikdvprprkrltelllrtATEKpGVEeaarralasrawgLRFFRSPQQVLPTPDGrRVAGIRLAVTRLEGVG 340
Cdd:PRK12775  619 --------------------------AKEE-GID-------------FFFLHSPVEIYVDAEG-SVRGMKVEEMELGEPD 657
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   341 ESTR--AVPTGDVEDLPCGLLLSSVGYKSRPI----DPSVPFDpKLGIIPNTEGRV-----VNAPGLYCSGWVKRGPTGV 409
Cdd:PRK12775  658 EKGRrkPMPTGEFKDLECDTVIYALGTKANPIitqsTPGLALN-KWGNIAADDGKLestqsTNLPGVFAGGDIVTGGATV 736

                  .
gi 13162347   410 I 410
Cdd:PRK12775  737 I 737
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
43-407 5.59e-13

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 70.02  E-value: 5.59e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   43 ICVVGSGPAGFYTAQHLLkhhTRAH-VDIYEKQLVPFGLVRFGVAPDHPEVKNV-----------INTFTQT---ARSDR 107
Cdd:PRK12770  21 VAIIGAGPAGLAAAGYLA---CLGYeVHVYDKLPEPGGLMLFGIPEFRIPIERVregvkeleeagVVFHTRTkvcCGEPL 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  108 CAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYN----GLPENQKLaPDLSCDTAV 183
Cdd:PRK12770  98 HEEEGDEFVERIVSLEELVKKYDAVLIATGTWKSRKLGIPGEDLPGVYSALEYLFRIRaaklGYLPWEKV-PPVEGKKVV 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  184 ILGQGNVALDVArilltppehlektdITEVALGvlrqsrVKTVWIVGRRgPLQVA----FTIKELREMiqlpgtqpildp 259
Cdd:PRK12770 177 VVGAGLTAVDAA--------------LEAVLLG------AEKVYLAYRR-TINEApagkYEIERLIAR------------ 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  260 sdflglqdrikdvprprkrltelllrtatekpGVEeaarralasrawgLRFFRSPQQVLptpDGRRVAGIRLAVTRLEGV 339
Cdd:PRK12770 224 --------------------------------GVE-------------FLELVTPVRII---GEGRVEGVELAKMRLGEP 255
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 13162347  340 GESTRAVP---TGDVEDLPCGLLLSSVGYKsrpidPSVPFDPK-LGIIPNTEGRVVNA-------PGLYCSGWVKRGPT 407
Cdd:PRK12770 256 DESGRPRPvpiPGSEFVLEADTVVFAIGEI-----PTPPFAKEcLGIELNRKGEIVVDekhmtsrEGVFAAGDVVTGPS 329
PRK12809 PRK12809
putative oxidoreductase Fe-S binding subunit; Reviewed
35-196 5.73e-13

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183762 [Multi-domain]  Cd Length: 639  Bit Score: 71.21  E-value: 5.73e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   35 STQETTPQI---CVVGSGPAGFYTAQHLLKhhTRAHVDIYEKQLVPFGLVRFGVAPDHPEvKNVINTFTQTARSDRCAFR 111
Cdd:PRK12809 302 DVSKVVPRSekvAVIGAGPAGLGCADILAR--AGVQVDVFDRHPEIGGMLTFGIPPFKLD-KTVLSQRREIFTAMGIDFH 378
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  112 GNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYN----GLPENQKLA-PDLSCDTAVILG 186
Cdd:PRK12809 379 LNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTrqlmGLPESEEYPlTDVEGKRVVVLG 458
                        170
                 ....*....|
gi 13162347  187 QGNVALDVAR 196
Cdd:PRK12809 459 GGDTTMDCLR 468
PRK12831 PRK12831
putative oxidoreductase; Provisional
42-233 7.25e-12

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 67.35  E-value: 7.25e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   42 QICVVGSGPAGFYTAQHLLKhhTRAHVDIYEKQLVPFGLVRFGVA----PDHPEVKNVINTFtqtaRSDRCAFRGNVVVG 117
Cdd:PRK12831 142 KVAVIGSGPAGLTCAGDLAK--MGYDVTIFEALHEPGGVLVYGIPefrlPKETVVKKEIENI----KKLGVKIETNVVVG 215
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  118 RDVSVPELRE--AYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYNGLpenQKLAPDLscDTAVILGQ-------G 188
Cdd:PRK12831 216 KTVTIDELLEeeGFDAVFIGSGAGLPKFMGIPGENLNGVFSANEFLTRVNLM---KAYKPEY--DTPIKVGKkvavvggG 290
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 13162347  189 NVALDVARilltppehlektdiTEVALGVlrqsrvkTVWIVGRRG 233
Cdd:PRK12831 291 NVAMDAAR--------------TALRLGA-------EVHIVYRRS 314
PRK13984 PRK13984
putative oxidoreductase; Provisional
42-218 1.29e-11

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 66.71  E-value: 1.29e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   42 QICVVGSGPAGFYTAQHLLKHHTRahVDIYEKQLVPFGLVRFGVA----PDHPEVKNVinTFTQtarSDRCAFRGNVVVG 117
Cdd:PRK13984 285 KVAIVGSGPAGLSAAYFLATMGYE--VTVYESLSKPGGVMRYGIPsyrlPDEALDKDI--AFIE---ALGVKIHLNTRVG 357
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  118 RDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSA----RAFVGWYNGLPENQKLAPDLscdtaVILGQGNVALD 193
Cdd:PRK13984 358 KDIPLEELREKHDAVFLSTGFTLGRSTRIPGTDHPDVIQAlpllREIRDYLRGEGPKPKIPRSL-----VVIGGGNVAMD 432
                        170       180
                 ....*....|....*....|....*
gi 13162347  194 VARILLtppeHLEKTDITEVALGVL 218
Cdd:PRK13984 433 IARSMA----RLQKMEYGEVNVKVT 453
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
42-410 9.62e-11

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 64.38  E-value: 9.62e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   42 QICVVGSGPAGFYTAQHLLKhhtRAH-VDIYEKQLVPFGLVRFGVapdhPEV---KNVINTFTQTARSDRCAFRGNVVVG 117
Cdd:PRK12778 433 KVAVIGSGPAGLSFAGDLAK---RGYdVTVFEALHEIGGVLKYGI----PEFrlpKKIVDVEIENLKKLGVKFETDVIVG 505
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  118 RDVSVPELR-EAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFVGWYNGLPenqklAPDLSCDTAVILGQ-------GN 189
Cdd:PRK12778 506 KTITIEELEeEGFKGIFIASGAGLPNFMNIPGENSNGVMSSNEYLTRVNLMD-----AASPDSDTPIKFGKkvavvggGN 580
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  190 VALDVARilltppehlektdiTEVALGvlrqsrVKTVWIVGRRGPlqvaftikelREMiqlpgtqpildPSdflglqdri 269
Cdd:PRK12778 581 TAMDSAR--------------TAKRLG------AERVTIVYRRSE----------EEM-----------PA--------- 610
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  270 kdvprprkRLTELllrtateKPGVEEaarralasrawGLRF--FRSPQQVLPTPDGrRVAGIRLAVTRLEGVGESTRAVP 347
Cdd:PRK12778 611 --------RLEEV-------KHAKEE-----------GIEFltLHNPIEYLADEKG-WVKQVVLQKMELGEPDASGRRRP 663
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 13162347  348 ---TGDVEDLPCGLLLSSVGYKSRPIDPSVPFDPKL---GIIPNTEGRVVNAPGLYCSGWVKRGPTGVI 410
Cdd:PRK12778 664 vaiPGSTFTVDVDLVIVSVGVSPNPLVPSSIPGLELnrkGTIVVDEEMQSSIPGIYAGGDIVRGGATVI 732
PRK12779 PRK12779
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ...
41-196 2.69e-07

putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional


Pssm-ID: 183740 [Multi-domain]  Cd Length: 944  Bit Score: 53.30  E-value: 2.69e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   41 PQICVVGSGPAGFYTAqHLLKHHTRAhVDIYEKQLVPFGLVRFGVapdhPEVK---NVINTFTQTARSDRCAFRGNVVVG 117
Cdd:PRK12779 307 PPIAVVGSGPSGLINA-YLLAVEGFP-VTVFEAFHDLGGVLRYGI----PEFRlpnQLIDDVVEKIKLLGGRFVKNFVVG 380
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347  118 RDVSVPEL-REAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAF---VGWYNGL-PENQKLAPDLSCDTAVILGQGNVAL 192
Cdd:PRK12779 381 KTATLEDLkAAGFWKIFVGTGAGLPTFMNVPGEHLLGVMSANEFltrVNLMRGLdDDYETPLPEVKGKEVFVIGGGNTAM 460

                 ....
gi 13162347  193 DVAR 196
Cdd:PRK12779 461 DAAR 464
PRK12769 PRK12769
putative oxidoreductase Fe-S binding subunit; Reviewed
45-196 6.94e-06

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183733 [Multi-domain]  Cd Length: 654  Bit Score: 48.59  E-value: 6.94e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13162347   45 VVGSGPAGFYTAQHLLKHHTRAHVdiYEKQLVPFGLVRFGVaPDHPEVKNVINTFTQTARSDRCAFRGNVVVGRDVSVPE 124
Cdd:PRK12769 332 IIGAGPAGLACADVLARNGVAVTV--YDRHPEIGGLLTFGI-PAFKLDKSLLARRREIFSAMGIEFELNCEVGKDISLES 408
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 13162347  125 LREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFV----GWYNGLPENQKlAP--DLSCDTAVILGQGNVALDVAR 196
Cdd:PRK12769 409 LLEDYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLiantKQVMGLEELPE-EPfiNTAGLNVVVLGGGDTAMDCVR 485
PRK09897 PRK09897
FAD-NAD(P)-binding protein;
42-73 2.02e-03

FAD-NAD(P)-binding protein;


Pssm-ID: 182134 [Multi-domain]  Cd Length: 534  Bit Score: 40.49  E-value: 2.02e-03
                         10        20        30
                 ....*....|....*....|....*....|..
gi 13162347   42 QICVVGSGPAGFYTAQHLLKHHTRAHVDIYEK 73
Cdd:PRK09897   3 KIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQ 34
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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