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Conserved domains on  [gi|45387951|ref|NP_076432|]
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transmembrane protein 108 isoform 1 precursor [Homo sapiens]

Protein Classification

TMEM108 domain-containing protein( domain architecture ID 12174462)

TMEM108 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TMEM108 pfam15759
TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 63-575 0e+00

TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 258 and 575 amino acids in length.


:

Pssm-ID: 464851 [Multi-domain]  Cd Length: 511  Bit Score: 728.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    63 VVMLTPNPDGPPSQAAAPMATpTPRAEGHPPTHTISTIAATVTAPHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPTIL 142
Cdd:pfam15759   1 VVTLEPHPDGPSSQATASMQT-TPHPDGHPPTQTLSTILVTAVTPHSEGPLPTGPPPAAMATTESHSEGRPPGEAVPTIL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   143 LTKPPGATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPPAPGGHSRSKEGQRGRNPSSTPLGQKRPLGKIFQIYKG 222
Cdd:pfam15759  80 LTKPTGATSRPTTAPTRSTTRRPPRPPGSSRKGASSSSRPVSPAPSGHLGRKEGQRGRNQSSTHLGQKRPLGKIFQIYKG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   223 NFTGSVEPEPSTLTPRTPLWGYSSSPQPQTVAATTVPSNTSWAPTTTSLGPAKDKPGLRRAAQGGGSTFTSQGGTPDATA 302
Cdd:pfam15759 160 NFTGSVEPDPSALTPRTPLWGYSSSPQPQTVSTTTAPPSTSWRPPTNPLVPAEDKPGLSRANQGSGSTFTSQGGELDTTA 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   303 ASGAPVSPQAAPVPSQRPHhGDPQDGPSHSDSWLTVTPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGASTT 382
Cdd:pfam15759 240 ASGAPISPQPAPVPSQKPH-SDNQDGPSHSDSWLTVTPNTNRPLSASSGVFTAIQGPTQAAFDASVSAPSQGIPQGTSTT 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   383 PQAPTHPSRVSESTISGAKEETVATLTMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTAGNISHVAEGDKPQHRATI 462
Cdd:pfam15759 319 PQAPTNPPGVSESTVSIAEEEATATPNMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTAGNISHVAEGDKPQHRATI 398

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   463 CLSKMDIAWVILAISVPISSCSVLLTVCCMKRKKKTANPENNLSYWNNTITMDYFNRHAVELPREIQSLETSEDQLSEPR 542
Cdd:pfam15759 399 CLSKMDIVWVILAISVPISSCSVLLTVCCMRRKKKTANPENNLSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPR 478

                         490       500       510
                  ....*....|....*....|....*....|...
gi 45387951   543 SPANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 575
Cdd:pfam15759 479 SPANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 511
 
Name Accession Description Interval E-value
TMEM108 pfam15759
TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 63-575 0e+00

TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 258 and 575 amino acids in length.


Pssm-ID: 464851 [Multi-domain]  Cd Length: 511  Bit Score: 728.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    63 VVMLTPNPDGPPSQAAAPMATpTPRAEGHPPTHTISTIAATVTAPHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPTIL 142
Cdd:pfam15759   1 VVTLEPHPDGPSSQATASMQT-TPHPDGHPPTQTLSTILVTAVTPHSEGPLPTGPPPAAMATTESHSEGRPPGEAVPTIL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   143 LTKPPGATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPPAPGGHSRSKEGQRGRNPSSTPLGQKRPLGKIFQIYKG 222
Cdd:pfam15759  80 LTKPTGATSRPTTAPTRSTTRRPPRPPGSSRKGASSSSRPVSPAPSGHLGRKEGQRGRNQSSTHLGQKRPLGKIFQIYKG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   223 NFTGSVEPEPSTLTPRTPLWGYSSSPQPQTVAATTVPSNTSWAPTTTSLGPAKDKPGLRRAAQGGGSTFTSQGGTPDATA 302
Cdd:pfam15759 160 NFTGSVEPDPSALTPRTPLWGYSSSPQPQTVSTTTAPPSTSWRPPTNPLVPAEDKPGLSRANQGSGSTFTSQGGELDTTA 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   303 ASGAPVSPQAAPVPSQRPHhGDPQDGPSHSDSWLTVTPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGASTT 382
Cdd:pfam15759 240 ASGAPISPQPAPVPSQKPH-SDNQDGPSHSDSWLTVTPNTNRPLSASSGVFTAIQGPTQAAFDASVSAPSQGIPQGTSTT 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   383 PQAPTHPSRVSESTISGAKEETVATLTMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTAGNISHVAEGDKPQHRATI 462
Cdd:pfam15759 319 PQAPTNPPGVSESTVSIAEEEATATPNMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTAGNISHVAEGDKPQHRATI 398

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   463 CLSKMDIAWVILAISVPISSCSVLLTVCCMKRKKKTANPENNLSYWNNTITMDYFNRHAVELPREIQSLETSEDQLSEPR 542
Cdd:pfam15759 399 CLSKMDIVWVILAISVPISSCSVLLTVCCMRRKKKTANPENNLSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPR 478

                         490       500       510
                  ....*....|....*....|....*....|...
gi 45387951   543 SPANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 575
Cdd:pfam15759 479 SPANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 511
PHA03247 PHA03247
large tegument protein UL36; Provisional
 26-325 2.32e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.17  E-value: 2.32e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    26 AFAIQEPSPRESLQVLPSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMatpTPRAEGHPPTHTISTIAATVT 105
Cdd:PHA03247 2697 SLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG---GPARPARPPTTAGPPAPAPPA 2773

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   106 APHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPTILLTkPPGATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPP 185
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVL-APAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   186 ----APGGHSRSKegQRGRNPSSTPLGQKRPlgKIFQIYKGNFTGSVEPEPSTLTPRTPLWGYSSSPQPQTVAATTVPSN 261
Cdd:PHA03247 2853 ggsvAPGGDVRRR--PPSRSPAAKPAAPARP--PVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQ 2928

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 45387951   262 TSWAPTTTSLGPAKDKPGLRRAAQGG----------GSTFTSQGGTPDATAASGAPVSPQAAPVPSQRPHHGDP 325
Cdd:PHA03247 2929 PQPPPPPPPRPQPPLAPTTDPAGAGEpsgavpqpwlGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
 
Name Accession Description Interval E-value
TMEM108 pfam15759
TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 63-575 0e+00

TMEM108 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 258 and 575 amino acids in length.


Pssm-ID: 464851 [Multi-domain]  Cd Length: 511  Bit Score: 728.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    63 VVMLTPNPDGPPSQAAAPMATpTPRAEGHPPTHTISTIAATVTAPHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPTIL 142
Cdd:pfam15759   1 VVTLEPHPDGPSSQATASMQT-TPHPDGHPPTQTLSTILVTAVTPHSEGPLPTGPPPAAMATTESHSEGRPPGEAVPTIL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   143 LTKPPGATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPPAPGGHSRSKEGQRGRNPSSTPLGQKRPLGKIFQIYKG 222
Cdd:pfam15759  80 LTKPTGATSRPTTAPTRSTTRRPPRPPGSSRKGASSSSRPVSPAPSGHLGRKEGQRGRNQSSTHLGQKRPLGKIFQIYKG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   223 NFTGSVEPEPSTLTPRTPLWGYSSSPQPQTVAATTVPSNTSWAPTTTSLGPAKDKPGLRRAAQGGGSTFTSQGGTPDATA 302
Cdd:pfam15759 160 NFTGSVEPDPSALTPRTPLWGYSSSPQPQTVSTTTAPPSTSWRPPTNPLVPAEDKPGLSRANQGSGSTFTSQGGELDTTA 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   303 ASGAPVSPQAAPVPSQRPHhGDPQDGPSHSDSWLTVTPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGASTT 382
Cdd:pfam15759 240 ASGAPISPQPAPVPSQKPH-SDNQDGPSHSDSWLTVTPNTNRPLSASSGVFTAIQGPTQAAFDASVSAPSQGIPQGTSTT 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   383 PQAPTHPSRVSESTISGAKEETVATLTMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTAGNISHVAEGDKPQHRATI 462
Cdd:pfam15759 319 PQAPTNPPGVSESTVSIAEEEATATPNMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTAGNISHVAEGDKPQHRATI 398

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   463 CLSKMDIAWVILAISVPISSCSVLLTVCCMKRKKKTANPENNLSYWNNTITMDYFNRHAVELPREIQSLETSEDQLSEPR 542
Cdd:pfam15759 399 CLSKMDIVWVILAISVPISSCSVLLTVCCMRRKKKTANPENNLSYWNNAITMDYFNRHAVELPREIQSLETSEDQLSEPR 478

                         490       500       510
                  ....*....|....*....|....*....|...
gi 45387951   543 SPANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 575
Cdd:pfam15759 479 SPANGDYRDTGMVLVNPFCQETLFVGNDQVSEI 511
PHA03247 PHA03247
large tegument protein UL36; Provisional
 26-325 2.32e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.17  E-value: 2.32e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    26 AFAIQEPSPRESLQVLPSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMatpTPRAEGHPPTHTISTIAATVT 105
Cdd:PHA03247 2697 SLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG---GPARPARPPTTAGPPAPAPPA 2773

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   106 APHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPTILLTkPPGATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPP 185
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVL-APAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   186 ----APGGHSRSKegQRGRNPSSTPLGQKRPlgKIFQIYKGNFTGSVEPEPSTLTPRTPLWGYSSSPQPQTVAATTVPSN 261
Cdd:PHA03247 2853 ggsvAPGGDVRRR--PPSRSPAAKPAAPARP--PVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQ 2928

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 45387951   262 TSWAPTTTSLGPAKDKPGLRRAAQGG----------GSTFTSQGGTPDATAASGAPVSPQAAPVPSQRPHHGDP 325
Cdd:PHA03247 2929 PQPPPPPPPRPQPPLAPTTDPAGAGEpsgavpqpwlGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
PHA03247 PHA03247
large tegument protein UL36; Provisional
 70-398 3.87e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.40  E-value: 3.87e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    70 PDGPPsqAAAPMATPTPRAEGHPPTHTISTIAATVTAPHSESslsTGPAPAAmattsskPEGRPRGQAAPTILltkPPGA 149
Cdd:PHA03247 2557 PAAPP--AAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSA---RPRAPVD-------DRGDPRGPAPPSPL---PPDT 2621

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   150 TsrpttapprtttrrpprppgssrkgagnssRPVPPAPGGHSRSKEGQRGRNPSSTPLGQKRPLGKIFQIYKGNFTGSVE 229
Cdd:PHA03247 2622 H------------------------------APDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG 2671

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   230 PEPSTLTP---------RTPLWGYSSSPQPQTVAATTVPSNTSWAPTTtslgPAKDKPGLRRAAQGGGSTFTSQGGTPDA 300
Cdd:PHA03247 2672 RAAQASSPpqrprrraaRPTVGSLTSLADPPPPPPTPEPAPHALVSAT----PLPPGPAAARQASPALPAAPAPPAVPAG 2747

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   301 TAASGAPVSPQAAPVPSQRPHHGDPQDGPSHSDSWLTVTPGTSRPLSTSSG------VFTAATGPTPAAFDTSVSAPSQG 374
Cdd:PHA03247 2748 PATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLpspwdpADPPAAVLAPAAALPPAASPAGP 2827

                         330       340
                  ....*....|....*....|....
gi 45387951   375 IPQGASTTPQAPTHPSRVSESTIS 398
Cdd:PHA03247 2828 LPPPTSAQPTAPPPPPGPPPPSLP 2851
PHA03247 PHA03247
large tegument protein UL36; Provisional
 30-436 2.52e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 50.71  E-value: 2.52e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    30 QEPSPRESlqVLPSGTPPGTMVTAPhsstrhtsvvmLTPNPDGPPSQAAAPMATPTPRAEGHPPTHTISTIAATVTAPHS 109
Cdd:PHA03247 2594 QSARPRAP--VDDRGDPRGPAPPSP-----------LPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGR 2660

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   110 ESSLSTGPAPAAMATTSSKPEG-RPRGQAAPTILLTK-----PPGATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPV 183
Cdd:PHA03247 2661 VSRPRRARRLGRAAQASSPPQRpRRRAARPTVGSLTSladppPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPA 2740

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   184 PPAPGghsrskegqrgrNPSSTPLGQKRPlgkifqiykgnftgSVEPEPSTLTPRTPLWGYSSSPQPqtvaATTVPSNTS 263
Cdd:PHA03247 2741 PPAVP------------AGPATPGGPARP--------------ARPPTTAGPPAPAPPAAPAAGPPR----RLTRPAVAS 2790

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   264 WAPTTTSLGPAKDKPGLRRAAQGGGSTFTSQ----GGTPDATAASGAPVSPQAAPVPSQRPHHGD-------PQDGPSHS 332
Cdd:PHA03247 2791 LSESRESLPSPWDPADPPAAVLAPAAALPPAaspaGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSvapggdvRRRPPSRS 2870

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   333 DSWLTVTPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGASTTPQAPTHPSRVSESTISGAKEETVATLTMTD 412
Cdd:PHA03247 2871 PAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPA 2950

                         410       420
                  ....*....|....*....|....
gi 45387951   413 RVPSPLSTVVSTATGNFLNRLVPA 436
Cdd:PHA03247 2951 GAGEPSGAVPQPWLGALVPGRVAV 2974
PHA03247 PHA03247
large tegument protein UL36; Provisional
 31-436 1.14e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.78  E-value: 1.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    31 EPSPRESLqvlPSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMATPTPRaeghPPTHTISTIAATVTAPHSE 110
Cdd:PHA03247 2572 RPAPRPSE---PAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPD----PPPPSPSPAANEPDPHPPP 2644

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   111 SSLSTGPAPAAMATTSSKPEGRPRGQAAPTILLTKPPGATSRPTTAPPRTTTrrpprppgssrkgagNSSRPVPPAPGGH 190
Cdd:PHA03247 2645 TVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLT---------------SLADPPPPPPTPE 2709

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   191 SRSKEGQRG--RNPSSTPLGQKRPLGKIFQIYKGNFTGSVEPEPSTLTPRTPLWGYSSSPQPQTVAATTVPSNTSwAPTT 268
Cdd:PHA03247 2710 PAPHALVSAtpLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT-RPAV 2788

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   269 TSLGPAKDKPGLRRAAQGGGSTFTSQGGTPDATAASGAPVSPQAAPVPSQRPHHGDPQDGPSHSDSWLTVTPGTSRPLST 348
Cdd:PHA03247 2789 ASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPS 2868

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   349 SSGVFTAATGPTPAAFDTSVSAPSQ-----GIPQGASTTPQAPTHPSRVSESTISGAKEETVATLTMTDRVPSPLSTVVS 423
Cdd:PHA03247 2869 RSPAAKPAAPARPPVRRLARPAVSRstesfALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTD 2948

                         410
                  ....*....|...
gi 45387951   424 TATGNFLNRLVPA 436
Cdd:PHA03247 2949 PAGAGEPSGAVPQ 2961
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 11-407 1.83e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.86  E-value: 1.83e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    11 QLLSFLLILALTEALAFAIQEPSPRESLQVLPSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMATPTPRAEg 90
Cdd:PHA03307   83 ESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAA- 161

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    91 hPPTHTISTIAATVTAPHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPtilltKPPGATSrpttapprtTTRRPPRPPG 170
Cdd:PHA03307  162 -VASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRR-----SSPISAS---------ASSPAPAPGR 226

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   171 SSRKGAGNSSRPVPPAPGghSRSKEGQRGRNPSSTPLGQKRPlgkifqiykgnfTGSVEPEPSTLTPRTPLWGYSSSPQP 250
Cdd:PHA03307  227 SAADDAGASSSDSSSSES--SGCGWGPENECPLPRPAPITLP------------TRIWEASGWNGPSSRPGPASSSSSPR 292

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   251 qtvaattvPSNTSWAPTTTSLGPAkdkPGLRRAAQGGGStftSQGGTPDATAASGAPVSPQAAPVPSQRPHHGDPQDGPs 330
Cdd:PHA03307  293 --------ERSPSPSPSSPGSGPA---PSSPRASSSSSS---SRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPP- 357

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 45387951   331 hsdSWLTVTPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGAstTPQAPTHPSRVSESTISGAKEETVAT 407
Cdd:PHA03307  358 ---PPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDA--TGRFPAGRPRPSPLDAGAASGAFYAR 429
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 282-390 3.76e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 46.90  E-value: 3.76e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  282 RAAQGGGSTFTSQGGTPDATAASGAPVSPQAAPVPSQRPHHGDPQDGPSHSDSWLTVTPGTSR-PLSTSSGVFTAATGPT 360
Cdd:PRK07764 392 GAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPsPPPAAAPSAQPAPAPA 471

                         90       100       110
                 ....*....|....*....|....*....|
gi 45387951  361 PAAFDTSVSAPSQGIPQGASTTPQAPTHPS 390
Cdd:PRK07764 472 AAPEPTAAPAPAPPAAPAPAAAPAAPAAPA 501
PHA03247 PHA03247
large tegument protein UL36; Provisional
 42-391 1.32e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 1.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    42 PSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMATP------------TPRAEGHPPTHTISTIAATVTAPHS 109
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSltsladppppppTPEPAPHALVSATPLPPGPAAARQA 2731

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   110 ESSLSTGPAPAAMATTSSKPEGRPRGQAAPTILLTKPPGATSRPTTAPPRTTTRRPPRPPGSSRKGAgnssrPVPPAPGG 189
Cdd:PHA03247 2732 SPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESL-----PSPWDPAD 2806

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   190 HSRSKEGQR-GRNPSSTPlgqkrplgkifqiykgnftGSVEPEPSTLTPRTPLWGYSSSPQPQTVAATTVPSN------T 262
Cdd:PHA03247 2807 PPAAVLAPAaALPPAASP-------------------AGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGdvrrrpP 2867

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   263 SWAPTTTSLGPAkdKPGLRRAAQGGGSTFT-SQGGTPDATA---ASGAPVSPQAAPVPSQRPHHGDPQDGPSHSDSWLTV 338
Cdd:PHA03247 2868 SRSPAAKPAAPA--RPPVRRLARPAVSRSTeSFALPPDQPErppQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAP 2945

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 45387951   339 TPGTSRPLSTSSGVFTAATGptpAAFDTSVSAPSQGIPQGAST--TPQAPTHPSR 391
Cdd:PHA03247 2946 TTDPAGAGEPSGAVPQPWLG---ALVPGRVAVPRFRVPQPAPSreAPASSTPPLT 2997
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 66-391 2.61e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.82  E-value: 2.61e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   66 LTPNPDGPPSQAAAPMATPTPRAEGHPPthtistiAATVTAPHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPTILLTK 145
Cdd:PRK07764 385 LGVAGGAGAPAAAAPSAAAAAPAAAPAP-------AAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPP 457

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  146 P---PGATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPPAPGGHSRSKEGQRGRNPS-STPLGQKRplGKIFQIYK 221
Cdd:PRK07764 458 PaaaPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEiLAAVPKRS--RKTWAILL 535

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  222 GNFT-GSVEPEPSTLTPRTPLWGYS-SSPQPQTVAATTVPS--NTSWAPTTTsLGPAKDKPGLRRAAQGGGSTFTSQGGT 297
Cdd:PRK07764 536 PEATvLGVRGDTLVLGFSTGGLARRfASPGNAEVLVTALAEelGGDWQVEAV-VGPAPGAAGGEGPPAPASSGPPEEAAR 614

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  298 PDATAASGAPVSPQAAPVPSQRPHHGDPQDGPSHSDSWLTVTPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQ 377
Cdd:PRK07764 615 PAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPA 694

                        330
                 ....*....|....
gi 45387951  378 GASTTPQAPTHPSR 391
Cdd:PRK07764 695 GAAPAQPAPAPAAT 708
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 38-403 3.81e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.44  E-value: 3.81e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   38 LQVLPSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMATPTPRAEGHPPTHTISTIAATVTAPHSESSLSTGP 117
Cdd:PRK07764 385 LGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSA 464

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  118 APAAMATTSSKPEGRPRGQAAPTILLTKPPGATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPPAPG--------- 188
Cdd:PRK07764 465 QPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLpeatvlgvr 544

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  189 ------GHSRSKEGQRGRNPSSTP-----LGQKrpLGKIFQI--------YKGNFTGSVEPEPSTLTPRTPLWGYSSSPQ 249
Cdd:PRK07764 545 gdtlvlGFSTGGLARRFASPGNAEvlvtaLAEE--LGGDWQVeavvgpapGAAGGEGPPAPASSGPPEEAARPAAPAAPA 622

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  250 PQTVAATTVPSNTSWAPTTTSLGPAKDKPGLRRAAQGGGSTFTSQGGTPDATAASGAPVSPQAAPVPSQRPhHGDPQDGP 329
Cdd:PRK07764 623 APAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAP-AGAAPAQP 701

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 45387951  330 SHSDSWLTVTPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGASTTPQAPTHPSRVSESTISGAKEE 403
Cdd:PRK07764 702 APAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
72-315 1.45e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.40  E-value: 1.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   72 GPPSQAAAPMATPTPRA----------EGHPPTHTISTIAATVTAPHSESSLSTGPAPAAMATTSSKPEGRPRGQAAPTI 141
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAaapaaaapapAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  142 LLTKPPGATSRPTTapprtttrrpprppgssrkgAGNSSRPVPPAPGGHSRSKEGQRGRNPSSTPLGQKRPlgkifqiyk 221
Cdd:PRK12323 453 APAAAPAAAARPAA--------------------AGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELP--------- 503

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  222 GNFTgsvEPEPSTLTPRTPLWGYSSSPQPQTvAATTVPSNTSWAPTTTSLGPAKDKPGLRRAAQgggstftsqgGTPDAT 301
Cdd:PRK12323 504 PEFA---SPAPAQPDAAPAGWVAESIPDPAT-ADPDDAFETLAPAPAAAPAPRAAAATEPVVAP----------RPPRAS 569

                        250
                 ....*....|....
gi 45387951  302 AASGAPVSPQAAPV 315
Cdd:PRK12323 570 ASGLPDMFDGDWPA 583
PHA03378 PHA03378
EBNA-3B; Provisional
 35-391 1.93e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 41.21  E-value: 1.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   35 RESLQVLPSGTP--PGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMATPTPRAEGHPPTHTISTIAATVTAPHSESS 112
Cdd:PHA03378 595 TPWPVPHPSQTPepPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPY 674

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  113 LSTGPAPAAMattsskpegRPRgQAAPTILLTKPPGATSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPPAPGGhsr 192
Cdd:PHA03378 675 QPSPTGANTM---------LPI-QWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAP--- 741

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  193 skegQRGRNPSSTPLGQKRPLGkifqiykgnftGSVEPEPSTLTPRTPlwgyssSPQPQTVAATTVPSNTSWAPTTT--- 269
Cdd:PHA03378 742 ----GRARPPAAAPGRARPPAA-----------APGRARPPAAAPGAP------TPQPPPQAPPAPQQRPRGAPTPQppp 800

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  270 SLGPAKDKPGLRRAAQGGGSTFTSQGGTPDATAASGAPVSPQAAPVPSQRPHHGDPQDGPSHSDSwLTVTPGTSRPLSTS 349
Cdd:PHA03378 801 QAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAAAGPTPSPGSGTSDK-IVQAPVFYPPVLQP 879

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 45387951  350 SGVFTAATGPTPAafdtsvsapsqgipqGASTTPQAPTHPSR 391
Cdd:PHA03378 880 IQVMRQLGSVRAA---------------AASTVTQAPTEYTG 906
PHA03247 PHA03247
large tegument protein UL36; Provisional
 180-444 4.11e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 4.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   180 SRPVPPAPGGHSRSKEGQRGRNP-SSTPLGQKRPlgkifqiyKGNFTGSVEPEPS---TLTPRTPlwgySSSPQPQTVAA 255
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRPDAPPqSARPRAPVDD--------RGDPRGPAPPSPLppdTHAPDPP----PPSPSPAANEP 2638

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   256 TTVPSNTSWAPTTTSLGPAKDKPGLRRAAQGGG----STFTSQGGTPDATAASGAPVSPQAAPVPSQRPhhgdPQDGPSH 331
Cdd:PHA03247 2639 DPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGraaqASSPPQRPRRRAARPTVGSLTSLADPPPPPPT----PEPAPHA 2714

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   332 SDSWLTVTPGT------SRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGASTTPQAPTHPSRVSESTISGAKEETV 405
Cdd:PHA03247 2715 LVSATPLPPGPaaarqaSPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSES 2794

                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 45387951   406 ATLTMTDRVPSPLSTVVSTATGNFLNRLVPAGTWKPGTA 444
Cdd:PHA03247 2795 RESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTS 2833
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 42-317 4.30e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 40.28  E-value: 4.30e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951    42 PSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAP--------MATPTPRAEGHPPTHTISTIAAT--VTAPHSES 111
Cdd:pfam05109 466 PTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPdmtsptsaVTTPTPNATSPTPAVTTPTPNATspTLGKTSPT 545

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   112 SLSTGPAPAAMATTSSKPEGRPRGqAAPTILLTKPPGA-TSRPTTAPPRTTTRRPPRPPGSSRKGAGNSSRPVPPAPGGH 190
Cdd:pfam05109 546 SAVTTPTPNATSPTPAVTTPTPNA-TIPTLGKTSPTSAvTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKN 624

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   191 SRS--KEGQRGRNPSSTPLGQKRPlgkifqiykGNFTGSVEPEPS-TLTPRTPLWGYSSSPQPQTVAATTVPSNTSWAPT 267
Cdd:pfam05109 625 ATSavTTGQHNITSSSTSSMSLRP---------SSISETLSPSTSdNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVS 695

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 45387951   268 TTSLGPakdKPGLRRAAQGGGSTFTS--------QGGTPDATAASGAPVSPQAAPVPS 317
Cdd:pfam05109 696 TSSPAP---RPGTTSQASGPGNSSTStkpgevnvTKGTPPKNATSPQAPSGQKTAVPT 750
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 24-150 7.77e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 39.08  E-value: 7.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951   24 ALAF--AIQEPSPRESLQVLPSGTPPGTMVTAPHSSTRHTSVVMLTPNPDGPPSQAAAPMATPTP----------RAEGH 91
Cdd:PRK07994 356 MLAFhpAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqllaarqqlqRAQGA 435

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 45387951   92 PPTHTISTIAATVTAPHS---ESSLSTGPAPAAMATTSSKPEGrPRGQAAPTILLTKPPGAT 150
Cdd:PRK07994 436 TKAKKSEPAAASRARPVNsalERLASVRPAPSALEKAPAKKEA-YRWKATNPVEVKKEPVAT 496
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 175-386 8.04e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.20  E-value: 8.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  175 GAGNSSRPVPPAPGGHSRSKEGQRGRNPSSTPLGQKRPlgkifqiykgnFTGSVEPEPSTLTPRTPLWGYSSSPQPQTVA 254
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAP-----------APAGAAAAPAEASAAPAPGVAAPEHHPKHVA 658

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45387951  255 ATTVPSNTS-WAPTTTSLGPAKDKPGLRRAAQGGGstfTSQGGTPDATAASGAPVSPQAAPVPSQRPHHGDPQDGPSHSD 333
Cdd:PRK07764 659 VPDASDGGDgWPAKAGGAAPAAPPPAPAPAAPAAP---AGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAA 735

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 45387951  334 SwltvtPGTSRPLSTSSGVFTAATGPTPAAFDTSVSAPSQGIPQGASTTPQAP 386
Cdd:PRK07764 736 D-----DPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEE 783
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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