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Conserved domains on  [gi|9910416|ref|NP_064348|]
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dnaJ homolog subfamily B member 8 [Mus musculus]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 1-106 5.40e-42

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 146.06  E-value: 5.40e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     1 MA--NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDR---AGCDRWRA 75
Cdd:PRK10767   1 MAkrDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQyghAAFEQGGG 79

                         90       100       110
                 ....*....|....*....|....*....|..
gi 9910416    76 GGGanvphsspFGAGYPFRNP-EDIFREFFGG 106
Cdd:PRK10767  80 GGG--------FGGGGGFGDIfGDIFGDIFGG 103
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-106 5.40e-42

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 146.06  E-value: 5.40e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     1 MA--NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDR---AGCDRWRA 75
Cdd:PRK10767   1 MAkrDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQyghAAFEQGGG 79

                         90       100       110
                 ....*....|....*....|....*....|..
gi 9910416    76 GGGanvphsspFGAGYPFRNP-EDIFREFFGG 106
Cdd:PRK10767  80 GGG--------FGGGGGFGDIfGDIFGDIFGG 103
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-130 2.51e-39

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 138.50  E-value: 2.51e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416      4 YYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDnkEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGANVPH 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 9910416     84 SSPFGAGyPFRNPEDIFREFFGGldpfsfefwdTPFSGRGRPHGLHR 130
Cdd:TIGR02349  80 FNGFDIG-FFGDFGDIFGDFFGG----------GGGSGRRRRSGPRR 115
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 2.12e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.89  E-value: 2.12e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 9910416      3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-69 8.57e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.27  E-value: 8.57e-36
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 9910416    3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAG 69
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFG 66
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-61 1.00e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 112.71  E-value: 1.00e-32
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 9910416       3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSDSKK 61
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 6.91e-30

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 105.32  E-value: 6.91e-30
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 9910416    3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNkEEAEKKFKQVSEAYEVLSD 58
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-123 2.38e-27

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 107.98  E-value: 2.38e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNpdNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDrwragggaNVP 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHD--------GVD 75

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 9910416    83 HSSPFGagypFrNPEDIFREFFGGLDPfSFEFWDTPFSGRG 123
Cdd:NF037946  76 GEGGFG----F-DAFDVFSSFFETINK-SGAFLDDSVDESV 110
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-106 5.40e-42

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 146.06  E-value: 5.40e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     1 MA--NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDR---AGCDRWRA 75
Cdd:PRK10767   1 MAkrDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQyghAAFEQGGG 79

                         90       100       110
                 ....*....|....*....|....*....|..
gi 9910416    76 GGGanvphsspFGAGYPFRNP-EDIFREFFGG 106
Cdd:PRK10767  80 GGG--------FGGGGGFGDIfGDIFGDIFGG 103
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-130 2.51e-39

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 138.50  E-value: 2.51e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416      4 YYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDnkEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGANVPH 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 9910416     84 SSPFGAGyPFRNPEDIFREFFGGldpfsfefwdTPFSGRGRPHGLHR 130
Cdd:TIGR02349  80 FNGFDIG-FFGDFGDIFGDFFGG----------GGGSGRRRRSGPRR 115
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 2.12e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.89  E-value: 2.12e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 9910416      3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-69 8.57e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 123.27  E-value: 8.57e-36
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 9910416    3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAG 69
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFG 66
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-124 2.23e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 123.12  E-value: 2.23e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGA--- 79
Cdd:PRK14290   4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNfnw 83

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 9910416    80 -NVPHsspfgagypFRNPEDIFREFFGGldpfsfEFWDTPFSGRGR 124
Cdd:PRK14290  84 dNFTH---------FSDINDIFNQIFGG------NFGSDFFSGFGN 114
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-61 1.00e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 112.71  E-value: 1.00e-32
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 9910416       3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSDSKK 61
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14280 PRK14280
molecular chaperone DnaJ;
3-106 5.09e-32

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 119.83  E-value: 5.09e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKnpdNKEE-AEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGANV 81
Cdd:PRK14280   5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDI---NKEEgADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG 81

                         90       100
                 ....*....|....*....|....*
gi 9910416    82 PHSSPFGAGYPFrnpEDIFREFFGG 106
Cdd:PRK14280  82 FGGGDFGGGFGF---EDIFSSFFGG 103
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 2-128 1.52e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 118.79  E-value: 1.52e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     2 ANYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGAnv 81
Cdd:PRK14284   1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGG-- 77

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 9910416    82 phsspFGaGYPFRNPEDIFREF---FGGLDPFSFEFWDTPFSGRGRPHGL 128
Cdd:PRK14284  78 -----FG-GAGMGNMEDALRTFmgaFGGEFGGGGSFFEGLFGGLGEAFGM 121
PRK14297 PRK14297
molecular chaperone DnaJ;
1-106 4.87e-31

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 117.19  E-value: 4.87e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     1 MAN--YYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGG 78
Cdd:PRK14297   1 MASkdYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGG 79

                         90       100       110
                 ....*....|....*....|....*....|.
gi 9910416    79 ANvphSSPFGaGYPFRNP---EDIFREFFGG 106
Cdd:PRK14297  80 FG---SGGFG-GFDFSDMggfGDIFDSFFGG 106
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-124 6.31e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 117.22  E-value: 6.31e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAGcdrwRAGGGANVp 82
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQFG----HAGVGSSA- 77

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 9910416    83 hSSPFGAGYPFRNPE--DIFREF---------FGGLDPFSFEfwdTPFSGRGR 124
Cdd:PRK14281  78 -ASGGGPGYGGGGGDfnDIFSAFndmfgggarRGGGSPFGFE---DVFGGGGR 126
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-124 2.09e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 115.25  E-value: 2.09e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     4 YYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAGcdrwraggganvpH 83
Cdd:PRK14294   6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYG-------------H 71

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 9910416    84 SSPFGAGYP-FRNPEDIFREFFgglDPFSfEFWDTPFSGRGR 124
Cdd:PRK14294  72 EGLSGTGFSgFSGFDDIFSSFG---DIFE-DFFGFGGGRRGR 109
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-111 3.36e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 114.84  E-value: 3.36e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNkEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGcdrwRAGGGANvp 82
Cdd:PRK14301   5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFG----HAGVNGN-- 77

                         90       100       110
                 ....*....|....*....|....*....|..
gi 9910416    83 hsspfGAGYPFRNPEDIFREF---FGGLDPFS 111
Cdd:PRK14301  78 -----GGFGGFSSAEDIFSHFsdiFGDLFGFS 104
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 6.91e-30

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 105.32  E-value: 6.91e-30
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 9910416    3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNkEEAEKKFKQVSEAYEVLSD 58
Cdd:cd06257   1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-124 7.20e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 113.73  E-value: 7.20e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCdrwragGGANVP 82
Cdd:PRK14282   5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGY------VGEQPP 78

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 9910416    83 HSSPFGAGYPFrnpEDIFREF--FGGLDPFSFEFWDTPFSGRGR 124
Cdd:PRK14282  79 YQETESGGGFF---EDIFKDFenIFNRDIFDIFFGERRTQEEQR 119
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 1-106 7.37e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 113.99  E-value: 7.37e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     1 MA-NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDnkEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGcDRWRAGGGA 79
Cdd:PRK14278   1 MArDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGG-DPLESAGGG 77

                         90       100
                 ....*....|....*....|....*..
gi 9910416    80 NvphsSPFGAGypFRNPEDIFREFFGG 106
Cdd:PRK14278  78 G----GGFGGG--FGGLGDVFEAFFGG 98
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-130 2.21e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 112.63  E-value: 2.21e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDnkEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGcdrwRAGGGANVP 82
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFG----HAGIDNQYS 79

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 9910416    83 HSSPFGaGYPFRNPEDIFREFFGGldpfsfefwdtpfSGRGRPHGLHR 130
Cdd:PRK14298  80 AEDIFR-GADFGGFGDIFEMFFGG-------------GGRRGRMGPRR 113
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 1-106 3.85e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 112.10  E-value: 3.85e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     1 MAN--YYEVLGVQSSASPEDIKKAYRKLALRWHPDKnpdNKEE-AEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGG 77
Cdd:PRK14276   1 MNNteYYDRLGVSKDASQDEIKKAYRKLSKKYHPDI---NKEPgAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGF 77

                         90       100
                 ....*....|....*....|....*....
gi 9910416    78 GANVPHSSPFGAGYPFRNPEDIFREFFGG 106
Cdd:PRK14276  78 GGGAGGFGGFDGSGGFGGFEDIFSSFFGG 106
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-107 1.58e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 110.36  E-value: 1.58e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     1 MANYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDnkEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGcdrwrAGGGAN 80
Cdd:PRK14292   1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFG-----TAPGAG 73

                         90       100
                 ....*....|....*....|....*..
gi 9910416    81 VPHSSPFGaGYPFrNPEDIFREFFGGL 107
Cdd:PRK14292  74 MPGGDPFG-GMGF-DPMDIFEQLFGGA 98
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-124 3.24e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 109.47  E-value: 3.24e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDnkEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWrAGGGANVP 82
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAF-SGSGQQQQ 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 9910416    83 HSSPFGaGYPFRNPEDIFREFFGGLDpFSFEFWDTPFSGRGR 124
Cdd:PRK14291  81 GQEGFS-DFGGGNIEDILEDVFDIFG-FGDIFGRRRATRERR 120
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-86 3.41e-28

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 102.10  E-value: 3.41e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416    1 MANYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRagcdRWRAGGGAN 80
Cdd:COG2214   4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR----ELGQSGKGS 79


                ....*.
gi 9910416   81 VPHSSP 86
Cdd:COG2214  80 ASQPSA 85
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 1.49e-27

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 99.69  E-value: 1.49e-27
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416    3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKR 62
Cdd:COG5407   1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKR 59
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-105 1.73e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 107.58  E-value: 1.73e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGG-GANV 81
Cdd:PRK14277   6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGfGQGG 84

                         90       100
                 ....*....|....*....|....*..
gi 9910416    82 PHSSPFGAG---YPFRNPEDIFREFFG 105
Cdd:PRK14277  85 FGQGGFGGGgfdFDFGGFGDIFEDIFG 111
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-123 2.38e-27

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 107.98  E-value: 2.38e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNpdNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDrwragggaNVP 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHD--------GVD 75

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 9910416    83 HSSPFGagypFrNPEDIFREFFGGLDPfSFEFWDTPFSGRG 123
Cdd:NF037946  76 GEGGFG----F-DAFDVFSSFFETINK-SGAFLDDSVDESV 110
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-106 4.21e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 106.61  E-value: 4.21e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     4 YYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGAnvph 83
Cdd:PRK14286   6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGG---- 80

                         90       100
                 ....*....|....*....|....*....
gi 9910416    84 sspFGAG-YP-----FRNPEDIFREFFGG 106
Cdd:PRK14286  81 ---FGQGaYTdfsdiFGDFGDIFGDFFGG 106
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-106 8.44e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 105.46  E-value: 8.44e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGANVP 82
Cdd:PRK14285   4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82

                         90       100
                 ....*....|....*....|....
gi 9910416    83 HSSPFGAGYPFRNPEDIFREFFGG 106
Cdd:PRK14285  83 SGGFSGFSDIFEDFGDIFDSFFTG 106
PRK14289 PRK14289
molecular chaperone DnaJ;
3-111 1.35e-26

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 105.30  E-value: 1.35e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAGcdrwRAGGGANVP 82
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFG----HAGVGGAAG 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 9910416    83 HSSPFGAGYP----FRNPEDIFREFFGGLDPFS 111
Cdd:PRK14289  81 GGGFSGEGMSmediFSMFGDIFGGHGGGFGGFG 113
PRK14279 PRK14279
molecular chaperone DnaJ;
3-161 9.55e-26

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 102.89  E-value: 9.55e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAgcDRWRAGGGanvp 82
Cdd:PRK14279  10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-AAEERFKAVSEAHDVLSDPAKRKEYDET--RRLFAGGG---- 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416    83 hsspFGAGypFRNPEDIFREFFGGLDPFSFEFWDTpFSGRGRPHGlhrvfpSGFGEFpafmealssFNTL-GHGGGSRST 161
Cdd:PRK14279  83 ----FGGR--RFDGGGGFGGFGTGGDGAEFNLNDL-FDAAGRGGG------GGIGDL---------FGGLfNRGGGSARP 140
PRK14293 PRK14293
molecular chaperone DnaJ;
1-106 3.94e-25

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 101.22  E-value: 3.94e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     1 MANYYEVLGVQSSASPEDIKKAYRKLALRWHPDKnpdNKEE-AEKKFKQVSEAYEVLSDSKKRSVYDRAGcdrwRAG--G 77
Cdd:PRK14293   2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQFG----EAGvsG 74

                         90       100
                 ....*....|....*....|....*....
gi 9910416    78 GANVPHSSPFGaGYpfrnpEDIFREFFGG 106
Cdd:PRK14293  75 AAGFPDMGDMG-GF-----ADIFETFFSG 97
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-130 1.04e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 99.90  E-value: 1.04e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDnkEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGcdrwRAGGGAnvp 82
Cdd:PRK14283   6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFG----HAGMDG--- 76

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 9910416    83 hsspFGAGYPFRNP--EDIFREFFGGL----DPFSFefwdtpfsGRGRPHGLHR 130
Cdd:PRK14283  77 ----FSQEDIFNNInfEDIFQGFGFGIgnifDMFGF--------GGGSRHGPQR 118
PRK14295 PRK14295
molecular chaperone DnaJ;
3-90 4.41e-24

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 98.38  E-value: 4.41e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRA----GCDRWRAGGG 78
Cdd:PRK14295  10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYDEArslfGNGGFRPGPG 88

                         90
                 ....*....|..
gi 9910416    79 ANVPHSSPFGAG 90
Cdd:PRK14295  89 GGGGGGFNFDLG 100
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-134 6.47e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 96.55  E-value: 6.47e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDnkEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGANvP 82
Cdd:PRK14299   5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGP-P 81

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 9910416    83 HSSPFGAGYPFRNPEDiFREFFGGLdpfsfefwdtpFSGRGRPHGLHRVFPS 134
Cdd:PRK14299  82 PGPPGGGDFSGFNVGD-FSDFFQQL-----------FGGRGGFGGFGDLFGS 121
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-104 1.79e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 91.23  E-value: 1.79e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNpdNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRW-----RAGG 77
Cdd:PRK14300   4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFqnqqsRGGG 81

                         90       100
                 ....*....|....*....|....*..
gi 9910416    78 GANvphsspfGAGYPFRNpeDIFREFF 104
Cdd:PRK14300  82 GNH-------GGFHPDIN--DIFGDFF 99
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-106 9.01e-21

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 89.49  E-value: 9.01e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     4 YYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDnkeeaEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGANvph 83
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQPA--- 101

                         90       100
                 ....*....|....*....|...
gi 9910416    84 sspfgagypfrNPEDIFREFFGG 106
Cdd:PTZ00037 102 -----------DASDLFDLIFGG 113
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-106 2.36e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 88.14  E-value: 2.36e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNpdNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAG-CDRWRAGGGAnv 81
Cdd:PRK14287   5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGhTDPNQGFGGG-- 80

                         90       100
                 ....*....|....*....|....*
gi 9910416    82 phsspfGAGyPFRNPEDIFREFFGG 106
Cdd:PRK14287  81 ------GAG-DFGGFSDIFDMFFGG 98
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-104 5.87e-19

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 84.87  E-value: 5.87e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416      3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNpdNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGANvp 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDREDDFD-- 78

                          90       100
                  ....*....|....*....|..
gi 9910416     83 hsspFGAgypfrnpeDIFREFF 104
Cdd:TIGR03835  79 ----FQA--------DVFNSFF 88
PRK10266 PRK10266
curved DNA-binding protein;
3-105 1.75e-18

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 82.18  E-value: 1.75e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPD--KNPDnkeeAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAGGGAN 80
Cdd:PRK10266   5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQ 80

                         90       100
                 ....*....|....*....|....*
gi 9910416    81 VPHSSpfGAGYPFRNPEDIFREFFG 105
Cdd:PRK10266  81 FQHGD--GQSFNAEDFDDIFSSIFG 103
PRK14288 PRK14288
molecular chaperone DnaJ;
3-69 7.20e-18

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 80.89  E-value: 7.20e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKeEAEKKFKQVSEAYEVLSDSKKRSVYDRAG 69
Cdd:PRK14288   4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYG 69
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-105 2.68e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 79.61  E-value: 2.68e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNpdNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRAggganvp 82
Cdd:PRK14296   5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLN--KSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDG------- 75

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 9910416    83 hSSPFGAGYP-------------FRNPEDIFREFFG 105
Cdd:PRK14296  76 -SSGFSSNFGdfedlfsnmgssgFSSFTNIFSDFFG 110
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 1.74e-15

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 68.67  E-value: 1.74e-15
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 9910416    1 MANYYEVLGVQSSASPEDIKKAYRKLALRWHPDK-----NPDNKEEAEKKFKQVSEAYEVLSDSKKRSV 64
Cdd:COG1076   3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-87 3.89e-11

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 62.11  E-value: 3.89e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416      4 YYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNkeEAEKKFKQVSEAYEVLSDSKKRSVYDRAGCDRWRaggGANVPH 83
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK---GVNFIH 649


                  ....
gi 9910416     84 SSPF 87
Cdd:PTZ00341  650 PSIF 653
djlA PRK09430
co-chaperone DjlA;
5-61 8.25e-09

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 54.43  E-value: 8.25e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 9910416     5 YEVLGVQSSASPEDIKKAYRKLALRWHPDK------NPDNKEEAEKKFKQVSEAYEVLSDSKK 61
Cdd:PRK09430 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELIKKQKG 265
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 5.02e-07

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 49.65  E-value: 5.02e-07
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 9910416    2 ANYYEVLGV---QSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKK-FKQVSEAYEVLSDSKKRSVYD 66
Cdd:COG5269  43 VDLYALLGLskyRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYD 111
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 9.67e-06

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 44.48  E-value: 9.67e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9910416     1 MANYYEVLGVQS--SASPEDIKKAYRKLALRWHPDKnPDNKEEAEKKFKQVSE---AYEVLSDSKKRSVY 65
Cdd:PRK01356   1 MQNYFQLLGLPQeyNIDLKILEKQYFAMQVKYHPDK-AKTLQEKEQNLIIASElnnAYSTLKDALKRAEY 69
PHA03102 PHA03102
Small T antigen; Reviewed
 17-62 9.78e-04

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 38.50  E-value: 9.78e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 9910416    17 EDIKKAYRKLALRWHPDKNPDnkeeaEKKFKQVSEAYEVLSDSKKR 62
Cdd:PHA03102  22 PLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKS 62
PHA02624 PHA02624
large T antigen; Provisional
 17-62 5.05e-03

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 37.66  E-value: 5.05e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 9910416    17 EDIKKAYRKLALRWHPDKNPDnkeeaEKKFKQVSEAYEVLSDSKKR 62
Cdd:PHA02624  28 PLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQEGVKS 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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