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Conserved domains on  [gi|24431987|ref|NP_060922|]
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transmembrane protein 242 [Homo sapiens]

Protein Classification

transmembrane protein 242( domain architecture ID 10537276)

transmembrane protein 242 (TMEM242) is a DUF1358 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1358 pfam07096
Protein of unknown function (DUF1358); This family consists of several hypothetical eukaryotic ...
 10-124 1.19e-53

Protein of unknown function (DUF1358); This family consists of several hypothetical eukaryotic proteins of around 125 residues in length. The function of this family is unknown.


:

Pssm-ID: 429291  Cd Length: 115  Bit Score: 164.63  E-value: 1.19e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24431987    10 QPASGLEAPGSTNDRLFLVKGGIFLGTVAAAGMLAGFITTLSLAKKKSPEWFNKGSMATAALPESGSSLALRALGWGSLY 89
Cdd:pfam07096   1 VSQAGATAKTRKKDRRFLIKGAAFLGTVAVAGMLAGFGSTLALAKKKSPKWLNKGLAATAALPESGASLALRALGWGSLY 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 24431987    90 AWCGVGVISFAVWKALGVHSMNDFRSKMQSIFPTI 124
Cdd:pfam07096  81 AWCGVGLISKAVWKALGVHSLQEFRSKMQSIFPNI 115
 
Name Accession Description Interval E-value
DUF1358 pfam07096
Protein of unknown function (DUF1358); This family consists of several hypothetical eukaryotic ...
 10-124 1.19e-53

Protein of unknown function (DUF1358); This family consists of several hypothetical eukaryotic proteins of around 125 residues in length. The function of this family is unknown.


Pssm-ID: 429291  Cd Length: 115  Bit Score: 164.63  E-value: 1.19e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24431987    10 QPASGLEAPGSTNDRLFLVKGGIFLGTVAAAGMLAGFITTLSLAKKKSPEWFNKGSMATAALPESGSSLALRALGWGSLY 89
Cdd:pfam07096   1 VSQAGATAKTRKKDRRFLIKGAAFLGTVAVAGMLAGFGSTLALAKKKSPKWLNKGLAATAALPESGASLALRALGWGSLY 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 24431987    90 AWCGVGVISFAVWKALGVHSMNDFRSKMQSIFPTI 124
Cdd:pfam07096  81 AWCGVGLISKAVWKALGVHSLQEFRSKMQSIFPNI 115
 
Name Accession Description Interval E-value
DUF1358 pfam07096
Protein of unknown function (DUF1358); This family consists of several hypothetical eukaryotic ...
 10-124 1.19e-53

Protein of unknown function (DUF1358); This family consists of several hypothetical eukaryotic proteins of around 125 residues in length. The function of this family is unknown.


Pssm-ID: 429291  Cd Length: 115  Bit Score: 164.63  E-value: 1.19e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24431987    10 QPASGLEAPGSTNDRLFLVKGGIFLGTVAAAGMLAGFITTLSLAKKKSPEWFNKGSMATAALPESGSSLALRALGWGSLY 89
Cdd:pfam07096   1 VSQAGATAKTRKKDRRFLIKGAAFLGTVAVAGMLAGFGSTLALAKKKSPKWLNKGLAATAALPESGASLALRALGWGSLY 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 24431987    90 AWCGVGVISFAVWKALGVHSMNDFRSKMQSIFPTI 124
Cdd:pfam07096  81 AWCGVGLISKAVWKALGVHSLQEFRSKMQSIFPNI 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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