|
Name |
Accession |
Description |
Interval |
E-value |
| PTX |
smart00159 |
Pentraxin / C-reactive protein / pentaxin family; This family form a doscoid pentameric ... |
217-422 |
7.65e-104 |
|
Pentraxin / C-reactive protein / pentaxin family; This family form a doscoid pentameric structure. Human serum amyloid P demonstrates calcium-mediated ligand-binding.
Pssm-ID: 128463 Cd Length: 206 Bit Score: 306.50 E-value: 7.65e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 217 FKSPDAFKVSLPLRTNYLYGKIKKTLP-ELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEWGNNPIELLINDKV 295
Cdd:smart00159 1 QTDLTGKVFVFPKESDTSYVKLKPELPkPLQAFTVCLWFYSDLSPRGYSLFSYATKGQDNELLLYKEKQGEYSLYIGGKK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 296 AQLPLFVSDGKWHHICITWTTRDGMWEAFQDGeKLGTGENLAPWHPIKPGGVLILGQEQDTVGGRFDATQAFVGELSQFN 375
Cdd:smart00159 81 VQFPVPESDGKWHHICTTWESSSGIAELWVDG-KPGVRKGLAKGYTVKPGGSIILGQEQDSYGGGFDATQSFVGEIGDLN 159
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 7949098 376 IWDRVLRAQEIINIANCSTNMPGNIIPWVDNNVDVFGGASKWPVETC 422
Cdd:smart00159 160 MWDSVLSPEEIKSVYKGSTFSIGNILNWRALNYEVHGGVVIKPQEWC 206
|
|
| PTX |
cd00152 |
Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their ... |
221-417 |
3.99e-95 |
|
Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity. CRP binds to ligands containing phosphocholine, SAP binds to amyloid fibrils, DNA, chromatin, fibronectin, C4-binding proteins and glycosaminoglycans. "Long" pentraxins have N-terminal extensions to the common pentraxin domain; one group, the neuronal pentraxins, may be involved in synapse formation and remodeling, and they may also be able to form heteromultimers.
Pssm-ID: 238086 Cd Length: 201 Bit Score: 284.16 E-value: 3.99e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 221 DAFKVSLPLRTNYLYGKIKKTLP-ELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEWGNNPIELLINDKVAQLP 299
Cdd:cd00152 5 SGKVFVFPKESDTSYVKLKPELPkPLQAFTLCLWVYTDLSTREYSLFSYATKGQDNELLLYKEKDGGYSLYIGGKEVTFK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 300 LFVSDGKWHHICITWTTRDGMWEAFQDGEKLGTGEnLAPWHPIKPGGVLILGQEQDTVGGRFDATQAFVGELSQFNIWDR 379
Cdd:cd00152 85 VPESDGAWHHICVTWESTSGIAELWVNGKLSVRKS-LKKGYTVGPGGSIILGQEQDSYGGGFDATQSFVGEISDVNMWDS 163
|
170 180 190
....*....|....*....|....*....|....*...
gi 7949098 380 VLRAQEIINIANCSTNMPGNIIPWVDNNVDVFGGASKW 417
Cdd:cd00152 164 VLSPEEIKNVYSEGGTLSGNILNWRALNYEINGGVVIK 201
|
|
| Pentaxin |
pfam00354 |
Pentaxin family; Pentaxins are also known as pentraxins. |
222-414 |
1.64e-32 |
|
Pentaxin family; Pentaxins are also known as pentraxins.
Pssm-ID: 278768 Cd Length: 194 Bit Score: 121.76 E-value: 1.64e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 222 AFKVSLPLRTNYLYGKIKKTLPeLYAFTICLWLRSSASPGIGTpFSYAVPGQANEIvLIEWgNNPIELLINdkVAQLP-L 300
Cdd:pfam00354 2 VFVFPKESDTSYVSLIPELEKP-LQNFTLCLRFYTDLSRSYSL-FSYATKKQDNEL-LIFK-EKDGEYSFY--VGGAEvL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 301 FVSDG---KWHHICITWTTRDGMWEAFQDGeKLGTGENLAPWHPIKPGGVLILGQEQDTVGGRFDATQAFVGELSQFNIW 377
Cdd:pfam00354 76 FKVSEipvAPVHICTSWESSSGIAEFWVDG-KPWVRKSLKKGYTVGAPPSIILGQEQDSYGGGFDASQSLVGEIGDLNMW 154
|
170 180 190
....*....|....*....|....*....|....*..
gi 7949098 378 DRVLRAQEIINIANCSTnMPGNIIPWVDNNVDVFGGA 414
Cdd:pfam00354 155 DYVLTPEEINTVYKGGP-FSPNILDWRALNYEARGYV 190
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
57-215 |
9.11e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 9.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 57 EEELRAAVLQLRETVVQQKETLGAQREAIRELTGKLARceglAGGkargtgkDTMGDLPRDpghvVEQLSRSLQTLKDRL 136
Cdd:COG4913 297 LEELRAELARLEAELERLEARLDALREELDELEAQIRG----NGG-------DRLEQLERE----IERLERELEERERRR 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 137 ESLELQLRTnvsnAGLPSDFREvlqRRLGELERQLLRKVAELEDEKSLLHNE-TSAHRQKTEST--LNALLQRVTELERG 213
Cdd:COG4913 362 ARLEALLAA----LGLPLPASA---EEFAALRAEAAALLEALEEELEALEEAlAEAEAALRDLRreLRELEAEIASLERR 434
|
..
gi 7949098 214 NS 215
Cdd:COG4913 435 KS 436
|
|
| CDC37_N |
smart01071 |
Cdc37 N terminal kinase binding; Cdc37 is a molecular chaperone required for the activity of ... |
66-185 |
2.08e-03 |
|
Cdc37 N terminal kinase binding; Cdc37 is a molecular chaperone required for the activity of numerous eukaryotic protein kinases. This domain corresponds to the N terminal domain which binds predominantly to protein kinases.and is found N terminal to the Hsp (Heat shocked protein) 90-binding domain. Expression of a construct consisting of only the N-terminal domain of Saccharomyces pombe Cdc37 results in cellular viability. This indicates that interactions with the cochaperone Hsp90 may not be essential for Cdc37 function.
Pssm-ID: 198139 [Multi-domain] Cd Length: 154 Bit Score: 38.55 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 66 QLRETVVQQKETLGAQREAIRELTGKlarceglaggkargtgKDTMGDLPRDpghvvEQLSRSLQTLKDRLESLELQLRT 145
Cdd:smart01071 39 QARVERMEEIKNLKYELIMNDHLNKR----------------IDKLLKGLRE-----EELSPETPTYNEMLAELQDQLKK 97
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 7949098 146 NVSNA-GLPSDFREVLQRRLGEL---ERQLLRKVAELEDEKSLL 185
Cdd:smart01071 98 ELEEAnGDSEGLLEELKKHRDKLkkeQKELRKKLDELEKEEKKK 141
|
|
| CCDC-167 |
pfam15188 |
Coiled-coil domain-containing protein 167; The function of this family of coiled-coil domains, ... |
121-188 |
2.69e-03 |
|
Coiled-coil domain-containing protein 167; The function of this family of coiled-coil domains, has not, as yet, been determined. Members of this family remain uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between and 103 amino acids in length.
Pssm-ID: 464553 [Multi-domain] Cd Length: 82 Bit Score: 36.49 E-value: 2.69e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 7949098 121 VVEQLSRSLQTLKDRLESLELQLRTnvsnAGLPSDfrevlQRRLGELERQLLRKVAE-LEDEKSLLHNE 188
Cdd:pfam15188 4 EIDRLEEKIASCRDRLERIEKKLRR----EELSEE-----DRRSLEKELLLLKKRLEkNEEELKLLRKE 63
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
58-171 |
2.84e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.02 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 58 EELRAAVLQLRETVVQQKETLGAQREAIRELTGKL--ARCEGLAGGKARG-------TGK-----DTMGDLPRDPGHVVE 123
Cdd:PRK02224 609 ERLREKREALAELNDERRERLAEKRERKRELEAEFdeARIEEAREDKERAeeyleqvEEKldelrEERDDLQAEIGAVEN 688
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 7949098 124 QLSRsLQTLKDRLESLE---LQLRTNVSNAG--------LPSDFRevlQRRLGELERQL 171
Cdd:PRK02224 689 ELEE-LEELRERREALEnrvEALEALYDEAEelesmygdLRAELR---QRNVETLERML 743
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
68-201 |
5.70e-03 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 39.04 E-value: 5.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 68 RETVVQQKETLGAQREAIReltGKL--ARcEGLAGGKARGTGkdtmgdlprDPGHVVEQLSRSLQTLKDRLES-LELQLR 144
Cdd:NF041483 31 REKAVQHAEDLGYQVEVLR---AKLheAR-RSLASRPAYDGA---------DIGYQAEQLLRNAQIQADQLRAdAERELR 97
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 7949098 145 tnvsnaglpsDFREVLQRRLGELERQLLRKVAELEDE----KSLLHNETSAHRQKTESTLN 201
Cdd:NF041483 98 ----------DARAQTQRILQEHAEHQARLQAELHTEavqrRQQLDQELAERRQTVESHVN 148
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PTX |
smart00159 |
Pentraxin / C-reactive protein / pentaxin family; This family form a doscoid pentameric ... |
217-422 |
7.65e-104 |
|
Pentraxin / C-reactive protein / pentaxin family; This family form a doscoid pentameric structure. Human serum amyloid P demonstrates calcium-mediated ligand-binding.
Pssm-ID: 128463 Cd Length: 206 Bit Score: 306.50 E-value: 7.65e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 217 FKSPDAFKVSLPLRTNYLYGKIKKTLP-ELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEWGNNPIELLINDKV 295
Cdd:smart00159 1 QTDLTGKVFVFPKESDTSYVKLKPELPkPLQAFTVCLWFYSDLSPRGYSLFSYATKGQDNELLLYKEKQGEYSLYIGGKK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 296 AQLPLFVSDGKWHHICITWTTRDGMWEAFQDGeKLGTGENLAPWHPIKPGGVLILGQEQDTVGGRFDATQAFVGELSQFN 375
Cdd:smart00159 81 VQFPVPESDGKWHHICTTWESSSGIAELWVDG-KPGVRKGLAKGYTVKPGGSIILGQEQDSYGGGFDATQSFVGEIGDLN 159
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 7949098 376 IWDRVLRAQEIINIANCSTNMPGNIIPWVDNNVDVFGGASKWPVETC 422
Cdd:smart00159 160 MWDSVLSPEEIKSVYKGSTFSIGNILNWRALNYEVHGGVVIKPQEWC 206
|
|
| PTX |
cd00152 |
Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their ... |
221-417 |
3.99e-95 |
|
Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity. CRP binds to ligands containing phosphocholine, SAP binds to amyloid fibrils, DNA, chromatin, fibronectin, C4-binding proteins and glycosaminoglycans. "Long" pentraxins have N-terminal extensions to the common pentraxin domain; one group, the neuronal pentraxins, may be involved in synapse formation and remodeling, and they may also be able to form heteromultimers.
Pssm-ID: 238086 Cd Length: 201 Bit Score: 284.16 E-value: 3.99e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 221 DAFKVSLPLRTNYLYGKIKKTLP-ELYAFTICLWLRSSASPGIGTPFSYAVPGQANEIVLIEWGNNPIELLINDKVAQLP 299
Cdd:cd00152 5 SGKVFVFPKESDTSYVKLKPELPkPLQAFTLCLWVYTDLSTREYSLFSYATKGQDNELLLYKEKDGGYSLYIGGKEVTFK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 300 LFVSDGKWHHICITWTTRDGMWEAFQDGEKLGTGEnLAPWHPIKPGGVLILGQEQDTVGGRFDATQAFVGELSQFNIWDR 379
Cdd:cd00152 85 VPESDGAWHHICVTWESTSGIAELWVNGKLSVRKS-LKKGYTVGPGGSIILGQEQDSYGGGFDATQSFVGEISDVNMWDS 163
|
170 180 190
....*....|....*....|....*....|....*...
gi 7949098 380 VLRAQEIINIANCSTNMPGNIIPWVDNNVDVFGGASKW 417
Cdd:cd00152 164 VLSPEEIKNVYSEGGTLSGNILNWRALNYEINGGVVIK 201
|
|
| Pentaxin |
pfam00354 |
Pentaxin family; Pentaxins are also known as pentraxins. |
222-414 |
1.64e-32 |
|
Pentaxin family; Pentaxins are also known as pentraxins.
Pssm-ID: 278768 Cd Length: 194 Bit Score: 121.76 E-value: 1.64e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 222 AFKVSLPLRTNYLYGKIKKTLPeLYAFTICLWLRSSASPGIGTpFSYAVPGQANEIvLIEWgNNPIELLINdkVAQLP-L 300
Cdd:pfam00354 2 VFVFPKESDTSYVSLIPELEKP-LQNFTLCLRFYTDLSRSYSL-FSYATKKQDNEL-LIFK-EKDGEYSFY--VGGAEvL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 301 FVSDG---KWHHICITWTTRDGMWEAFQDGeKLGTGENLAPWHPIKPGGVLILGQEQDTVGGRFDATQAFVGELSQFNIW 377
Cdd:pfam00354 76 FKVSEipvAPVHICTSWESSSGIAEFWVDG-KPWVRKSLKKGYTVGAPPSIILGQEQDSYGGGFDASQSLVGEIGDLNMW 154
|
170 180 190
....*....|....*....|....*....|....*..
gi 7949098 378 DRVLRAQEIINIANCSTnMPGNIIPWVDNNVDVFGGA 414
Cdd:pfam00354 155 DYVLTPEEINTVYKGGP-FSPNILDWRALNYEARGYV 190
|
|
| Laminin_G_3 |
pfam13385 |
Concanavalin A-like lectin/glucanases superfamily; This domain belongs to the Concanavalin ... |
247-386 |
5.49e-16 |
|
Concanavalin A-like lectin/glucanases superfamily; This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
Pssm-ID: 463865 [Multi-domain] Cd Length: 151 Bit Score: 74.73 E-value: 5.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 247 AFTICLWLRSSASPGIGTPFsyAVPGQANEIVLIEWGNNPIELLIND-----KVAQLPLFVSDGKWHHICITWttRDGMW 321
Cdd:pfam13385 18 DFTVSAWVKPDSLPGWARAI--ISSSGGGGYSLGLDGDGRLRFAVNGgnggwDTVTSGASVPLGQWTHVAVTY--DGGTL 93
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 7949098 322 EAFQDGEKLGTGENLAPWhPIKPGGVLILGqeqdtvgGRFDATQAFVGELSQFNIWDRVLRAQEI 386
Cdd:pfam13385 94 RLYVNGVLVGSSTLTGGP-PPGTGGPLYIG-------RSPGGDDYFNGLIDEVRIYDRALSAAEI 150
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
57-215 |
9.11e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 9.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 57 EEELRAAVLQLRETVVQQKETLGAQREAIRELTGKLARceglAGGkargtgkDTMGDLPRDpghvVEQLSRSLQTLKDRL 136
Cdd:COG4913 297 LEELRAELARLEAELERLEARLDALREELDELEAQIRG----NGG-------DRLEQLERE----IERLERELEERERRR 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 137 ESLELQLRTnvsnAGLPSDFREvlqRRLGELERQLLRKVAELEDEKSLLHNE-TSAHRQKTEST--LNALLQRVTELERG 213
Cdd:COG4913 362 ARLEALLAA----LGLPLPASA---EEFAALRAEAAALLEALEEELEALEEAlAEAEAALRDLRreLRELEAEIASLERR 434
|
..
gi 7949098 214 NS 215
Cdd:COG4913 435 KS 436
|
|
| LamG |
cd00110 |
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ... |
248-377 |
1.56e-04 |
|
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Pssm-ID: 238058 [Multi-domain] Cd Length: 151 Bit Score: 41.63 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 248 FTICLWLRSSASPGIgtPFSYAVPGQANEIVL--------IEWGNNPIELLINDKVAqlplfVSDGKWHHICITWTTRDG 319
Cdd:cd00110 22 LSISFSFRTTSPNGL--LLYAGSQNGGDFLALeledgrlvLRYDLGSGSLVLSSKTP-----LNDGQWHSVSVERNGRSV 94
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 320 MweaFQ-DGEKLGTGENLAPWHPIKPGGVLILGQEQDTVGGRFDA-TQAFVGELSQFNIW 377
Cdd:cd00110 95 T---LSvDGERVVESGSPGGSALLNLDGPLYLGGLPEDLKSPGLPvSPGFVGCIRDLKVN 151
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
57-212 |
2.15e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.60 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 57 EEELRAAVLQLRE--TVVQQKETLGAQREAIR----ELTGKLARCEGLAGgkargtgkdtmgdlPRDPGHVVEQLSRSLQ 130
Cdd:COG4717 77 EEELKEAEEKEEEyaELQEELEELEEELEELEaeleELREELEKLEKLLQ--------------LLPLYQELEALEAELA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 131 TLKDRLESLELQLRTnvsnaglpsdfREVLQRRLGELERQLLRKVAELEDEKSLLHNETSAHRQKTESTLNALLQRVTEL 210
Cdd:COG4717 143 ELPERLEELEERLEE-----------LRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAEL 211
|
..
gi 7949098 211 ER 212
Cdd:COG4717 212 EE 213
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
58-212 |
3.95e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 3.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 58 EELRAAVLQLRETVVQQKETLGAQREAIRELTGKLARCEGLAGgkargtgkdtMGDLPRDpghvVEQLSRSLQTLKDRLE 137
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAE----------YSWDEID----VASAEREIAELEAELE 678
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 7949098 138 SLELqlrtnvSNAGLpsdfrEVLQRRLGELERQLlrkvAELEDEKsllhNETSAHRQKTESTLNALLQRVTELER 212
Cdd:COG4913 679 RLDA------SSDDL-----AALEEQLEELEAEL----EELEEEL----DELKGEIGRLEKELEQAEEELDELQD 734
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
52-212 |
1.71e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.77 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 52 GALSPEEELRAAVLQLRETVVQQKETlgaqREAIRELTGKLARCEglaggKARGTGKDTMGDLPRDPghvveqlsrSLQT 131
Cdd:COG3206 206 GLVDLSEEAKLLLQQLSELESQLAEA----RAELAEAEARLAALR-----AQLGSGPDALPELLQSP---------VIQQ 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 132 LKDRLESLELQLRTnvsnaglpsdfrevLQRRLGELERQLLRKVAELEDEKSLLHNETSAHRQKTESTLNALLQRVTELE 211
Cdd:COG3206 268 LRAQLAELEAELAE--------------LSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQ 333
|
.
gi 7949098 212 R 212
Cdd:COG3206 334 A 334
|
|
| CDC37_N |
smart01071 |
Cdc37 N terminal kinase binding; Cdc37 is a molecular chaperone required for the activity of ... |
66-185 |
2.08e-03 |
|
Cdc37 N terminal kinase binding; Cdc37 is a molecular chaperone required for the activity of numerous eukaryotic protein kinases. This domain corresponds to the N terminal domain which binds predominantly to protein kinases.and is found N terminal to the Hsp (Heat shocked protein) 90-binding domain. Expression of a construct consisting of only the N-terminal domain of Saccharomyces pombe Cdc37 results in cellular viability. This indicates that interactions with the cochaperone Hsp90 may not be essential for Cdc37 function.
Pssm-ID: 198139 [Multi-domain] Cd Length: 154 Bit Score: 38.55 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 66 QLRETVVQQKETLGAQREAIRELTGKlarceglaggkargtgKDTMGDLPRDpghvvEQLSRSLQTLKDRLESLELQLRT 145
Cdd:smart01071 39 QARVERMEEIKNLKYELIMNDHLNKR----------------IDKLLKGLRE-----EELSPETPTYNEMLAELQDQLKK 97
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 7949098 146 NVSNA-GLPSDFREVLQRRLGEL---ERQLLRKVAELEDEKSLL 185
Cdd:smart01071 98 ELEEAnGDSEGLLEELKKHRDKLkkeQKELRKKLDELEKEEKKK 141
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
36-211 |
2.11e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.71 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 36 EAARAGCPLPAmpmqggaLSPE------EELRAAVLQLRETVVQQKETLGAQREAIRELTGKLARCEGLAGGKARGTGKD 109
Cdd:COG3096 423 EKARALCGLPD-------LTPEnaedylAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQAWQ 495
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 110 TMGDLPRDpghvveqlSRSLQTLKDRLESLELQLRTNVSNAGLPSDFREVLQ---RRLG-------ELERQLLRKVAELE 179
Cdd:COG3096 496 TARELLRR--------YRSQQALAQRLQQLRAQLAELEQRLRQQQNAERLLEefcQRIGqqldaaeELEELLAELEAQLE 567
|
170 180 190
....*....|....*....|....*....|..
gi 7949098 180 DEKSLLhNETSAHRQKTESTLNALLQRVTELE 211
Cdd:COG3096 568 ELEEQA-AEAVEQRSELRQQLEQLRARIKELA 598
|
|
| CCDC-167 |
pfam15188 |
Coiled-coil domain-containing protein 167; The function of this family of coiled-coil domains, ... |
121-188 |
2.69e-03 |
|
Coiled-coil domain-containing protein 167; The function of this family of coiled-coil domains, has not, as yet, been determined. Members of this family remain uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between and 103 amino acids in length.
Pssm-ID: 464553 [Multi-domain] Cd Length: 82 Bit Score: 36.49 E-value: 2.69e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 7949098 121 VVEQLSRSLQTLKDRLESLELQLRTnvsnAGLPSDfrevlQRRLGELERQLLRKVAE-LEDEKSLLHNE 188
Cdd:pfam15188 4 EIDRLEEKIASCRDRLERIEKKLRR----EELSEE-----DRRSLEKELLLLKKRLEkNEEELKLLRKE 63
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
58-171 |
2.84e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.02 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 58 EELRAAVLQLRETVVQQKETLGAQREAIRELTGKL--ARCEGLAGGKARG-------TGK-----DTMGDLPRDPGHVVE 123
Cdd:PRK02224 609 ERLREKREALAELNDERRERLAEKRERKRELEAEFdeARIEEAREDKERAeeyleqvEEKldelrEERDDLQAEIGAVEN 688
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 7949098 124 QLSRsLQTLKDRLESLE---LQLRTNVSNAG--------LPSDFRevlQRRLGELERQL 171
Cdd:PRK02224 689 ELEE-LEELRERREALEnrvEALEALYDEAEelesmygdLRAELR---QRNVETLERML 743
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
68-201 |
5.70e-03 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 39.04 E-value: 5.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 68 RETVVQQKETLGAQREAIReltGKL--ARcEGLAGGKARGTGkdtmgdlprDPGHVVEQLSRSLQTLKDRLES-LELQLR 144
Cdd:NF041483 31 REKAVQHAEDLGYQVEVLR---AKLheAR-RSLASRPAYDGA---------DIGYQAEQLLRNAQIQADQLRAdAERELR 97
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 7949098 145 tnvsnaglpsDFREVLQRRLGELERQLLRKVAELEDE----KSLLHNETSAHRQKTESTLN 201
Cdd:NF041483 98 ----------DARAQTQRILQEHAEHQARLQAELHTEavqrRQQLDQELAERRQTVESHVN 148
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
58-212 |
6.69e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 38.76 E-value: 6.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 58 EELRAAVLQLRETVVQQKETLGAQREAIRELTGKLARCEglaGGKARgtGKDTMGDLPRDpghvVEQLSRSLQTLKDRLE 137
Cdd:COG1196 263 AELEAELEELRLELEELELELEEAQAEEYELLAELARLE---QDIAR--LEERRRELEER----LEELEEELAELEEELE 333
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 7949098 138 SLELQLRTNVSNAGLPSDFREVLQRRLGELERQLLRKVAELEDEKSLLHNETSAHRQKtESTLNALLQRVTELER 212
Cdd:COG1196 334 ELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA-LRAAAELAAQLEELEE 407
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
58-195 |
8.78e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 37.60 E-value: 8.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7949098 58 EELRAAVLQLRETVVQQKETLGAQREAIRELTGKLARCEG-LAGGKAR-GTGKDtmgdlPRDpghvVEQLSRSLQTLKDR 135
Cdd:COG1579 34 AELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEArIKKYEEQlGNVRN-----NKE----YEALQKEIESLKRR 104
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 7949098 136 LESLE---LQLRTNVSNAglpSDFREVLQRRLGELERQLLRKVAELEDEKSLLHNETSAHRQK 195
Cdd:COG1579 105 ISDLEdeiLELMERIEEL---EEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAE 164
|
|
| |
