|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1516-1773 |
2.95e-70 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 236.01 E-value: 2.95e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1516 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1593
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1594 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1673
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1674 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiqkpecGNEFAYFYFVSFIFLCSFLM 1753
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 1940128066 1754 LNLFVAVIMDNFEYLTRDSS 1773
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
99-373 |
6.58e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 226.76 E-value: 6.58e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 99 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 178
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 179 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 254
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 255 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 334
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 1940128066 335 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 373
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
489-727 |
4.29e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 195.56 E-value: 4.29e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 489 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 566
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 567 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 646
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 647 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 724
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 1940128066 725 LTK 727
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1195-1471 |
1.30e-50 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 179.77 E-value: 1.30e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1195 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1274
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1275 ALVAFAFTGNSKGKDINtikSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKF 1354
Cdd:pfam00520 79 SLISLVLSSVGSLSGLR---VLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1355 FHCTDESKEferdcrgkyllyeknevkardrewkkyDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATfenqGPSPGY 1434
Cdd:pfam00520 156 KTWENPDNG---------------------------RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK----GEFWAY 204
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1435 R-------------MEMsifyvvyfvvfpfffvniFVALIIITFQEQGDK 1471
Cdd:pfam00520 205 IyfvsfiilggfllLNL------------------FIAVIIDNFQELTER 236
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1845-1922 |
1.09e-34 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
:
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.10 E-value: 1.09e-34
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1940128066 1845 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 1922
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1782-1835 |
6.15e-30 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
:
Pssm-ID: 465306 Cd Length: 54 Bit Score: 113.52 E-value: 6.15e-30
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1940128066 1782 EYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLP 1835
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PHA03307 super family |
cl33723 |
transcriptional regulator ICP4; Provisional |
1945-2349 |
3.13e-05 |
|
transcriptional regulator ICP4; Provisional
The actual alignment was detected with superfamily member PHA03307:
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.40 E-value: 3.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1945 PSPTQEGGPSQNALPSTQLDPGGGLMAQESSMKESPSW------VTQRAQEMFQKTGTWSPERGPP-IDMPNSQPNSQSV 2017
Cdd:PHA03307 53 VTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWslstlaPASPAREGSPTPPGPSSPDPPPpTPPPASPPPSPAP 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2018 EMREMGTDGYSDSEhylPMEGQTRAASMPRLPAENQRRRGRPRGNNLSTISDTSPMKRSASV-LGPKARRLDDYSLERVP 2096
Cdd:PHA03307 133 DLSEMLRPVGSPGP---PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAePPPSTPPAAASPRPPRR 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2097 PEENQRYHQRRRDRGHRTSERSLGRYTDVDT---GLGTDLSMTTQSGDlPSKDRDQDRGRPKDRKHRPHHHHHHHHHHPP 2173
Cdd:PHA03307 210 SSPISASASSPAPAPGRSAADDAGASSSDSSsseSSGCGWGPENECPL-PRPAPITLPTRIWEASGWNGPSSRPGPASSS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2174 APDRERYAQERPDTGRARAREQRWSRSPSEGREHAThrQGSSSVSGSPAPSTSGTSTP----RRGRRQLPQTPCTPRPLV 2249
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRES--SSSSTSSSSESSRGAAVSPGpspsRSPSPSRPPPPADPSSPR 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2250 SYSPAprrpaarrmagppappggsprgcRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHEPAPRSPRTPRAAGCAS 2329
Cdd:PHA03307 367 KRPRP-----------------------SRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAAS 423
|
410 420
....*....|....*....|...
gi 1940128066 2330 PRHGRRLPNGYYAGH---GAPRP 2349
Cdd:PHA03307 424 GAFYARYPLLTPSGEpwpGSPPP 446
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
790-1171 |
3.88e-05 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.55 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 790 LASREAlyGDAAERWPTTyARPLRPDVKTHLDRPLvvdPQENRNNNTNKSRAPEALRQTARPRESARDPDARRA----WP 865
Cdd:PHA03247 2543 LASDDA--GDPPPPLPPA-APPAAPDRSVPPPRPA---PRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGpappSP 2616
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 866 SSPERAPGREGPYGRESEPQQ-----REHAPPREHVPWDADPER-------------AKAGDAPRRHTHR---------- 917
Cdd:PHA03247 2617 LPPDTHAPDPPPPSPSPAANEpdphpPPTVPPPERPRDDPAPGRvsrprrarrlgraAQASSPPQRPRRRaarptvgslt 2696
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 918 -----PVAEGEPRRHRARRRPGDEPDDRPERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAhddrerrh 984
Cdd:PHA03247 2697 sladpPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPA-------- 2768
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 985 rrrkeSQGSGVPMSGPNLSTTRPIQQDL--GRQDLPLAEDLDNMKNNKLATGePASPHDSLGHSGLPP--SPAKIGNSTN 1060
Cdd:PHA03247 2769 -----PAPPAAPAAGPPRRLTRPAVASLseSRESLPSPWDPADPPAAVLAPA-AALPPAASPAGPLPPptSAQPTAPPPP 2842
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1061 PGPALATNPQNAA-------SRRTPNNPGNPSNPGPPKTPENSLIVTNPSSTQPNSAKTARKPEHMAVEIPPAcPPLNHT 1133
Cdd:PHA03247 2843 PGPPPPSLPLGGSvapggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPP-PPQPQP 2921
|
410 420 430
....*....|....*....|....*....|....*....
gi 1940128066 1134 VVQVNKNANPDPLPKKEEEKKEEEEADP-GEDGPKPMPP 1171
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPPLAPTTDPaGAGEPSGAVP 2960
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1516-1773 |
2.95e-70 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 236.01 E-value: 2.95e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1516 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1593
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1594 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1673
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1674 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiqkpecGNEFAYFYFVSFIFLCSFLM 1753
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 1940128066 1754 LNLFVAVIMDNFEYLTRDSS 1773
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
99-373 |
6.58e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 226.76 E-value: 6.58e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 99 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 178
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 179 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 254
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 255 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 334
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 1940128066 335 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 373
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
489-727 |
4.29e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 195.56 E-value: 4.29e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 489 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 566
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 567 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 646
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 647 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 724
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 1940128066 725 LTK 727
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1195-1471 |
1.30e-50 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 179.77 E-value: 1.30e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1195 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1274
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1275 ALVAFAFTGNSKGKDINtikSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKF 1354
Cdd:pfam00520 79 SLISLVLSSVGSLSGLR---VLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1355 FHCTDESKEferdcrgkyllyeknevkardrewkkyDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATfenqGPSPGY 1434
Cdd:pfam00520 156 KTWENPDNG---------------------------RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK----GEFWAY 204
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1435 R-------------MEMsifyvvyfvvfpfffvniFVALIIITFQEQGDK 1471
Cdd:pfam00520 205 IyfvsfiilggfllLNL------------------FIAVIIDNFQELTER 236
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1845-1922 |
1.09e-34 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.10 E-value: 1.09e-34
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1940128066 1845 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 1922
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1782-1835 |
6.15e-30 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 113.52 E-value: 6.15e-30
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1940128066 1782 EYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLP 1835
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1900-1930 |
1.07e-10 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 1.07e-10
10 20 30
....*....|....*....|....*....|.
gi 1940128066 1900 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 1930
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1945-2349 |
3.13e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.40 E-value: 3.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1945 PSPTQEGGPSQNALPSTQLDPGGGLMAQESSMKESPSW------VTQRAQEMFQKTGTWSPERGPP-IDMPNSQPNSQSV 2017
Cdd:PHA03307 53 VTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWslstlaPASPAREGSPTPPGPSSPDPPPpTPPPASPPPSPAP 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2018 EMREMGTDGYSDSEhylPMEGQTRAASMPRLPAENQRRRGRPRGNNLSTISDTSPMKRSASV-LGPKARRLDDYSLERVP 2096
Cdd:PHA03307 133 DLSEMLRPVGSPGP---PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAePPPSTPPAAASPRPPRR 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2097 PEENQRYHQRRRDRGHRTSERSLGRYTDVDT---GLGTDLSMTTQSGDlPSKDRDQDRGRPKDRKHRPHHHHHHHHHHPP 2173
Cdd:PHA03307 210 SSPISASASSPAPAPGRSAADDAGASSSDSSsseSSGCGWGPENECPL-PRPAPITLPTRIWEASGWNGPSSRPGPASSS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2174 APDRERYAQERPDTGRARAREQRWSRSPSEGREHAThrQGSSSVSGSPAPSTSGTSTP----RRGRRQLPQTPCTPRPLV 2249
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRES--SSSSTSSSSESSRGAAVSPGpspsRSPSPSRPPPPADPSSPR 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2250 SYSPAprrpaarrmagppappggsprgcRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHEPAPRSPRTPRAAGCAS 2329
Cdd:PHA03307 367 KRPRP-----------------------SRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAAS 423
|
410 420
....*....|....*....|...
gi 1940128066 2330 PRHGRRLPNGYYAGH---GAPRP 2349
Cdd:PHA03307 424 GAFYARYPLLTPSGEpwpGSPPP 446
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
790-1171 |
3.88e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.55 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 790 LASREAlyGDAAERWPTTyARPLRPDVKTHLDRPLvvdPQENRNNNTNKSRAPEALRQTARPRESARDPDARRA----WP 865
Cdd:PHA03247 2543 LASDDA--GDPPPPLPPA-APPAAPDRSVPPPRPA---PRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGpappSP 2616
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 866 SSPERAPGREGPYGRESEPQQ-----REHAPPREHVPWDADPER-------------AKAGDAPRRHTHR---------- 917
Cdd:PHA03247 2617 LPPDTHAPDPPPPSPSPAANEpdphpPPTVPPPERPRDDPAPGRvsrprrarrlgraAQASSPPQRPRRRaarptvgslt 2696
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 918 -----PVAEGEPRRHRARRRPGDEPDDRPERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAhddrerrh 984
Cdd:PHA03247 2697 sladpPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPA-------- 2768
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 985 rrrkeSQGSGVPMSGPNLSTTRPIQQDL--GRQDLPLAEDLDNMKNNKLATGePASPHDSLGHSGLPP--SPAKIGNSTN 1060
Cdd:PHA03247 2769 -----PAPPAAPAAGPPRRLTRPAVASLseSRESLPSPWDPADPPAAVLAPA-AALPPAASPAGPLPPptSAQPTAPPPP 2842
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1061 PGPALATNPQNAA-------SRRTPNNPGNPSNPGPPKTPENSLIVTNPSSTQPNSAKTARKPEHMAVEIPPAcPPLNHT 1133
Cdd:PHA03247 2843 PGPPPPSLPLGGSvapggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPP-PPQPQP 2921
|
410 420 430
....*....|....*....|....*....|....*....
gi 1940128066 1134 VVQVNKNANPDPLPKKEEEKKEEEEADP-GEDGPKPMPP 1171
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPPLAPTTDPaGAGEPSGAVP 2960
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2075-2356 |
1.30e-04 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 46.98 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2075 RSASVLGPKARRLDDYSlerVPPEENQRYHQRRRDRgHRTSERSLGRYTDVDTGLGTDLSM--TTQSGDLPSKDRDQDRG 2152
Cdd:COG5180 169 DSASTLPPPAEKLDKVL---TEPRDALKDSPEKLDR-PKVEVKDEAQEEPPDLTGGADHPRpeAASSPKVDPPSTSEARS 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2153 RP-KDRKHRPHHHHHHHHHHPPAPDRERYAQERPDTGRARAREQrwsrsPSEGREHATHRQGSSSVSGSPAPSTSGTSTP 2231
Cdd:COG5180 245 RPaTVDAQPEMRPPADAKERRRAAIGDTPAAEPPGLPVLEAGSE-----PQSDAPEAETARPIDVKGVASAPPATRPVRP 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2232 RRGRRQlpqtPCTPRPlvsyspaprrpaarrmagppappggsprgcRRAPRWPAHAPEgprpRGADYTEPDSPREPPGGA 2311
Cdd:COG5180 320 PGGARD----PGTPRP------------------------------GQPTERPAGVPE----AASDAGQPPSAYPPAEEA 361
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1940128066 2312 HEPAPRSPRTPRAA-------------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2356
Cdd:COG5180 362 VPGKPLEQGAPRPGssggdgapfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
631-724 |
9.35e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 631 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 710
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 1940128066 711 FLAIAVDNL----ANAQE 724
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1516-1773 |
2.95e-70 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 236.01 E-value: 2.95e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1516 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1593
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1594 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1673
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1674 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiqkpecGNEFAYFYFVSFIFLCSFLM 1753
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 1940128066 1754 LNLFVAVIMDNFEYLTRDSS 1773
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
99-373 |
6.58e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 226.76 E-value: 6.58e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 99 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 178
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 179 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 254
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 255 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 334
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 1940128066 335 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 373
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
489-727 |
4.29e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 195.56 E-value: 4.29e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 489 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 566
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 567 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 646
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 647 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 724
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 1940128066 725 LTK 727
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1195-1471 |
1.30e-50 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 179.77 E-value: 1.30e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1195 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1274
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1275 ALVAFAFTGNSKGKDINtikSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKF 1354
Cdd:pfam00520 79 SLISLVLSSVGSLSGLR---VLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1355 FHCTDESKEferdcrgkyllyeknevkardrewkkyDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATfenqGPSPGY 1434
Cdd:pfam00520 156 KTWENPDNG---------------------------RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK----GEFWAY 204
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1435 R-------------MEMsifyvvyfvvfpfffvniFVALIIITFQEQGDK 1471
Cdd:pfam00520 205 IyfvsfiilggfllLNL------------------FIAVIIDNFQELTER 236
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1845-1922 |
1.09e-34 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.10 E-value: 1.09e-34
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1940128066 1845 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 1922
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1782-1835 |
6.15e-30 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 113.52 E-value: 6.15e-30
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1940128066 1782 EYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLP 1835
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1900-1930 |
1.07e-10 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 1.07e-10
10 20 30
....*....|....*....|....*....|.
gi 1940128066 1900 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 1930
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1555-1766 |
3.00e-09 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 59.60 E-value: 3.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1555 VFTSLFSLECVLKVMAFGiLNYFRDAWNIFDFVTVLGSITDILvtefgnnfinLSFLRLFRAARLIKLLRQ--------- 1625
Cdd:pfam08016 19 VFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSVVLIV----------LNIYRDFLADRLIKSVEAspvtfidfd 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1626 -----GYTIRIL-----------LWTFVQSFK-----------ALPYVC---LLIAMLFFIYAIIGMQVFGNigidgede 1675
Cdd:pfam08016 88 rvaqlDNLYRIIlaflvfltwlkLFKVLRFNKtmslftktlsrAWKDLAgfaLMFVIFFFAYAQFGYLLFGT-------- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1676 dsdedefqitEHNNFRTFFQALMLLFRsatgeawhnIMLSCLSgkpcdkNSGIQkpECGNEFAYFYFVSFIFLCSFLMLN 1755
Cdd:pfam08016 160 ----------QAPNFSNFVKSILTLFR---------TILGDFG------YNEIF--SGNRVLGPLLFLTFVFLVIFILLN 212
|
250
....*....|.
gi 1940128066 1756 LFVAVIMDNFE 1766
Cdd:pfam08016 213 LFLAIINDSYV 223
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1945-2349 |
3.13e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.40 E-value: 3.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1945 PSPTQEGGPSQNALPSTQLDPGGGLMAQESSMKESPSW------VTQRAQEMFQKTGTWSPERGPP-IDMPNSQPNSQSV 2017
Cdd:PHA03307 53 VTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWslstlaPASPAREGSPTPPGPSSPDPPPpTPPPASPPPSPAP 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2018 EMREMGTDGYSDSEhylPMEGQTRAASMPRLPAENQRRRGRPRGNNLSTISDTSPMKRSASV-LGPKARRLDDYSLERVP 2096
Cdd:PHA03307 133 DLSEMLRPVGSPGP---PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAePPPSTPPAAASPRPPRR 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2097 PEENQRYHQRRRDRGHRTSERSLGRYTDVDT---GLGTDLSMTTQSGDlPSKDRDQDRGRPKDRKHRPHHHHHHHHHHPP 2173
Cdd:PHA03307 210 SSPISASASSPAPAPGRSAADDAGASSSDSSsseSSGCGWGPENECPL-PRPAPITLPTRIWEASGWNGPSSRPGPASSS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2174 APDRERYAQERPDTGRARAREQRWSRSPSEGREHAThrQGSSSVSGSPAPSTSGTSTP----RRGRRQLPQTPCTPRPLV 2249
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRES--SSSSTSSSSESSRGAAVSPGpspsRSPSPSRPPPPADPSSPR 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2250 SYSPAprrpaarrmagppappggsprgcRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHEPAPRSPRTPRAAGCAS 2329
Cdd:PHA03307 367 KRPRP-----------------------SRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAAS 423
|
410 420
....*....|....*....|...
gi 1940128066 2330 PRHGRRLPNGYYAGH---GAPRP 2349
Cdd:PHA03307 424 GAFYARYPLLTPSGEpwpGSPPP 446
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2178-2364 |
3.35e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.40 E-value: 3.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2178 ERYAQERPDTGRARAREQRWSRSPSEGREHATHRQGSSSVSGSP-APSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPR 2256
Cdd:PHA03307 793 EAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPArPPGAAARPPPARSSESSKSKPAAAGGRARGKNGRR 872
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2257 rpaarrmagppappggsprgcRRAPRWPAHAPEGPRPRGADYTEPDSPrePPGGAHEPAPRSPRTPRAAGCASPRHG-RR 2335
Cdd:PHA03307 873 ---------------------RPRPPEPRARPGAAAPPKAAAAAPPAG--APAPRPRPAPRVKLGPMPPGGPDPRGGfRR 929
|
170 180
....*....|....*....|....*....
gi 1940128066 2336 LPNGYYagHGaPRPRTArrgAHDAYSESE 2364
Cdd:PHA03307 930 VPPGDL--HT-PAPSAA---ALAAYCPPE 952
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
790-1171 |
3.88e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.55 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 790 LASREAlyGDAAERWPTTyARPLRPDVKTHLDRPLvvdPQENRNNNTNKSRAPEALRQTARPRESARDPDARRA----WP 865
Cdd:PHA03247 2543 LASDDA--GDPPPPLPPA-APPAAPDRSVPPPRPA---PRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGpappSP 2616
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 866 SSPERAPGREGPYGRESEPQQ-----REHAPPREHVPWDADPER-------------AKAGDAPRRHTHR---------- 917
Cdd:PHA03247 2617 LPPDTHAPDPPPPSPSPAANEpdphpPPTVPPPERPRDDPAPGRvsrprrarrlgraAQASSPPQRPRRRaarptvgslt 2696
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 918 -----PVAEGEPRRHRARRRPGDEPDDRPERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAhddrerrh 984
Cdd:PHA03247 2697 sladpPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPA-------- 2768
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 985 rrrkeSQGSGVPMSGPNLSTTRPIQQDL--GRQDLPLAEDLDNMKNNKLATGePASPHDSLGHSGLPP--SPAKIGNSTN 1060
Cdd:PHA03247 2769 -----PAPPAAPAAGPPRRLTRPAVASLseSRESLPSPWDPADPPAAVLAPA-AALPPAASPAGPLPPptSAQPTAPPPP 2842
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1061 PGPALATNPQNAA-------SRRTPNNPGNPSNPGPPKTPENSLIVTNPSSTQPNSAKTARKPEHMAVEIPPAcPPLNHT 1133
Cdd:PHA03247 2843 PGPPPPSLPLGGSvapggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPP-PPQPQP 2921
|
410 420 430
....*....|....*....|....*....|....*....
gi 1940128066 1134 VVQVNKNANPDPLPKKEEEKKEEEEADP-GEDGPKPMPP 1171
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPPLAPTTDPaGAGEPSGAVP 2960
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
805-1187 |
4.59e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 4.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 805 PTTYARPLRPDVKTHLDRPLV-VDPQENRNNNTNKSRAPEAlrqTARPRESARDPDARRAWPSSPER------------- 870
Cdd:PHA03247 2580 PAVTSRARRPDAPPQSARPRApVDDRGDPRGPAPPSPLPPD---THAPDPPPPSPSPAANEPDPHPPptvppperprddp 2656
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 871 APGREGPYGRESEPQQ--REHAPPREHVPWDADPERAKAGDAPRRHTHRPVAEGEPRRHRARRRPGDEPDDRPERRPRPR 948
Cdd:PHA03247 2657 APGRVSRPRRARRLGRaaQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 949 DATRPARAADGEGDDGERKRRHR----HGPPAhddrerrhrrrkeSQGSGVPMSGPNLSTTRPIQQDLG--RQDLPLAED 1022
Cdd:PHA03247 2737 AAPAPPAVPAGPATPGGPARPARppttAGPPA-------------PAPPAAPAAGPPRRLTRPAVASLSesRESLPSPWD 2803
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1023 LDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG---------------PALATNP-- 1069
Cdd:PHA03247 2804 PADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspaakPAAPARPpv 2883
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1070 ----QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTVVQVNKNANPDP 1145
Cdd:PHA03247 2884 rrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPPLAPTTDPAGAG 2953
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1940128066 1146 LPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1187
Cdd:PHA03247 2954 EPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2075-2356 |
1.30e-04 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 46.98 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2075 RSASVLGPKARRLDDYSlerVPPEENQRYHQRRRDRgHRTSERSLGRYTDVDTGLGTDLSM--TTQSGDLPSKDRDQDRG 2152
Cdd:COG5180 169 DSASTLPPPAEKLDKVL---TEPRDALKDSPEKLDR-PKVEVKDEAQEEPPDLTGGADHPRpeAASSPKVDPPSTSEARS 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2153 RP-KDRKHRPHHHHHHHHHHPPAPDRERYAQERPDTGRARAREQrwsrsPSEGREHATHRQGSSSVSGSPAPSTSGTSTP 2231
Cdd:COG5180 245 RPaTVDAQPEMRPPADAKERRRAAIGDTPAAEPPGLPVLEAGSE-----PQSDAPEAETARPIDVKGVASAPPATRPVRP 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2232 RRGRRQlpqtPCTPRPlvsyspaprrpaarrmagppappggsprgcRRAPRWPAHAPEgprpRGADYTEPDSPREPPGGA 2311
Cdd:COG5180 320 PGGARD----PGTPRP------------------------------GQPTERPAGVPE----AASDAGQPPSAYPPAEEA 361
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1940128066 2312 HEPAPRSPRTPRAA-------------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2356
Cdd:COG5180 362 VPGKPLEQGAPRPGssggdgapfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1950-2364 |
1.38e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.47 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 1950 EGGPSQNALPSTQLDPGGGLMAQESSMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2029
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2030 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNNlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2108
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2109 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRERYAQERPD 2186
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2187 TGRARAREQRWSRSPSEGREhathrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARRMAgp 2266
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPS-- 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2267 pappggsprgcRRAPRWPAHAP--------EGPRPRGADYTEPDSPRE-----PPGGAHEPAPRSPRTPRAAGCASPR-- 2331
Cdd:PHA03307 300 -----------PSSPGSGPAPSsprassssSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkr 368
|
410 420 430
....*....|....*....|....*....|....
gi 1940128066 2332 -HGRRLPNGYYAGHGAPRPRTARRGAHDAYSESE 2364
Cdd:PHA03307 369 pRPSRAPSSPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
770-973 |
3.31e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 46.05 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 770 QKPAKSVWEQRTSEMRKQNLLAS-REALYGDAAERWPTTYARPLRPDVKTHLDRPLVVDPQENRNNNTNKSRAPEAlrQT 848
Cdd:PRK12678 32 RALAKQLGIKGTSGMRKGELIAAiKEARGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPA--AR 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 849 ARPRESARDPDARRAWPSSPERAPGREGPYGRESEPQQREHAPPREHVPWDADPERAKAGDAPRRHTHRPVAEGEprrhr 928
Cdd:PRK12678 110 AAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAE----- 184
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1940128066 929 aRRRPGDEPDDRPERRPRPRDATRPARAADGEGDDGERKRRHRHG 973
Cdd:PRK12678 185 -AERGERGRREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRG 228
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
2199-2335 |
2.74e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 42.31 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2199 RSPSEgREHATHRQGS----SSVSGSPAPSTSGTSTPR-RGRRQLPQTPCTPRPLVSYSPAPRRPAARRMAGPPAPPGGS 2273
Cdd:PHA03381 5 RSPRP-KPHGTDEVEAdvyyDFISPDASPARVSFEEPAdRARRGAGQARGRSQAERRFHHYDEARADYPYYTGSSSEDER 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1940128066 2274 PRGCRRaPRWPAHAPEGPRP---RGAdyTEPDSPREPPGGAHEPAPRSPRTPRAagcASPRHGRR 2335
Cdd:PHA03381 84 PADPRP-SRRPHAQPEASGPgpaRGA--RGPAGSRGRGRRAESPSPRDPPNPKG---ASAPRGRK 142
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2174-2365 |
3.24e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2174 APDRERYAQERPDTGRARAREQRWSRSPSEGREHATHRQGSSSVSGSPAPST-SGTSTPRRGRRQLPQTPCTPRPLVSYS 2252
Cdd:PHA03307 79 APANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPaPDLSEMLRPVGSPGPPPAASPPAAGAS 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2253 PaprrpaarrmagppappggsprgcRRAPRWPAHAPEGPRPRGADytePDSPREPPGGAHEPAPRSPRTPRAAGCASPRH 2332
Cdd:PHA03307 159 P------------------------AAVASDAASSRQAALPLSSP---EETARAPSSPPAEPPPSTPPAAASPRPPRRSS 211
|
170 180 190
....*....|....*....|....*....|...
gi 1940128066 2333 GRRlpngyyAGHGAPRPRTARRGAHDAYSESED 2365
Cdd:PHA03307 212 PIS------ASASSPAPAPGRSAADDAGASSSD 238
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
787-1075 |
3.27e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 3.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 787 QNLLASREALYGDA---AERWPTTYARPlrPDVKTHLDRPLVVDPQENRNNNTNKS-RAPEALRQTARPRESARDPDARR 862
Cdd:PHA03307 40 QGQLVSDSAELAAVtvvAGAAACDRFEP--PTGPPPGPGTEAPANESRSTPTWSLStLAPASPAREGSPTPPGPSSPDPP 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 863 AWPSSPERAPGREGPYGRESEPQQREHAPPREHVPWDA--DPERAKAGDAPRRHTHRPVAEGEPRRHRARRRPGDEPDDR 940
Cdd:PHA03307 118 PPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAgaSPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPST 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 941 PERRPRPRDATRPARAADGEGDDGERKRRHRHGPPAHDDRERRHRrrkESQGSGvpmSGPNLSTTRPIQqdlGRQDLPLA 1020
Cdd:PHA03307 198 PPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSS---ESSGCG---WGPENECPLPRP---APITLPTR 268
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1940128066 1021 EDLDNMKNNKLATGEPASPHDSLGHSGLPPSPakignSTNPGPALATNPQNAASR 1075
Cdd:PHA03307 269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSP-----SSPGSGPAPSSPRASSSS 318
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2214-2363 |
7.23e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 7.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2214 SSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPlvsyspaPRRPAARRMAGPPAPPGGSPRGCRRAPRWPAHAPEGPRP 2293
Cdd:PHA03247 2544 ASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRP-------SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP 2616
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2294 RGADYTEPDSPrePPGGAhePAPRSPRTPRAAGCASPRHGRRLPngyyAGHGAPRPRTARRGAHDAYSES 2363
Cdd:PHA03247 2617 LPPDTHAPDPP--PPSPS--PAANEPDPHPPPTVPPPERPRDDP----APGRVSRPRRARRLGRAAQASS 2678
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2174-2352 |
7.53e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 7.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2174 APDRERYAQERPDTGRARAREQRWSRSPSEGREHATHRQGSSSVSGSPAPSTSGtstPRRGRRQLPQTPCTPRPLvsysp 2253
Cdd:PHA03307 847 PARSSESSKSKPAAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGA---PAPRPRPAPRVKLGPMPP----- 918
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 2254 aprrpaarrmagppaPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEP-------DSPREPPggAHEPAPRspRTPR--- 2323
Cdd:PHA03307 919 ---------------GGPDPRGGFRRVPPGDLHTPAPSAAALAAYCPPevvaelvDHPLFPE--PWRPALA--FDPEala 979
|
170 180 190
....*....|....*....|....*....|.
gi 1940128066 2324 --AAGCASPRHGRRLPNGYYAGHGAPRPRTA 2352
Cdd:PHA03307 980 eiAARCGGPPPRSGSAFGPLRASGPLRRRAA 1010
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
631-724 |
9.35e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940128066 631 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 710
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 1940128066 711 FLAIAVDNL----ANAQE 724
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
| |
