NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|33695150|ref|NP_034925|]
View 

beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [Mus musculus]

Protein Classification

glycosyltransferase family 17 protein( domain architecture ID 5158)

glycosyltransferase family 17 protein may act as a beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase that transfers the bisecting GlcNAc to the core mannose of complex N-glycans

CAZY:  GT17
EC:  2.4.1.144
Gene Ontology:  GO:0006487|GO:0003830

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Glyco_transf_17 super family cl04706
Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1, ...
205-502 7.47e-31

Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression.


The actual alignment was detected with superfamily member pfam04724:

Pssm-ID: 428090  Cd Length: 349  Bit Score: 122.77  E-value: 7.47e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33695150   205 PREVPRRVINAININHEFDLLDVRFHELGDVVDAFVVCESNFTAYGEPRPLKFREmlTNGTFEYIRHKVLYVFLdhfppG 284
Cdd:pfam04724  68 LRESPRRVFDAVLFSNELDLLEIRWRELYPYVTQFVILESNTTFTGLPKPLFFAE--NRDRFAFAESKITYGTI-----P 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33695150   285 GR-----QDGWIADDYLRTFLTQdgVSRLRNLRPDDVFIIDDADEIPARDGVLFLKLYDGWTEPFAFHMRKSLYGFFWkq 359
Cdd:pfam04724 141 GRflkpgEDPFVEEAYQRVAMDQ--LLRRAGIEEGDLLIMSDVDEIPSAHTIELLRWCDGIPPVLHLQLRNYLYSFEF-- 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33695150   360 pgtlevvsgctmdmlqaVYGLDGIRLRRRQYYTMPNFRQYENRTGHILVQwslgsplhfAGWHCSWCF-TPEGIYFKLVS 438
Cdd:pfam04724 217 -----------------PVDYKSWRASVHRYQPGKTRYRHSRQSDVILAD---------AGWHCSFCFrHISEFVFKMKA 270
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 33695150   439 AQNGDFPRWGDYedkrdLNY--IRSLIRTGG-WFDGTQQEYPPAD------PSEHMYA----PKYLLKNYDQFRYLL 502
Cdd:pfam04724 271 YSHADRVRRSSL-----LNPkrIQDVICKGSdLFDMLPEEYTFKElikkmgPIPRSYSavhlPRYLLENAEKFRFLL 342
 
Name Accession Description Interval E-value
Glyco_transf_17 pfam04724
Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1, ...
205-502 7.47e-31

Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression.


Pssm-ID: 428090  Cd Length: 349  Bit Score: 122.77  E-value: 7.47e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33695150   205 PREVPRRVINAININHEFDLLDVRFHELGDVVDAFVVCESNFTAYGEPRPLKFREmlTNGTFEYIRHKVLYVFLdhfppG 284
Cdd:pfam04724  68 LRESPRRVFDAVLFSNELDLLEIRWRELYPYVTQFVILESNTTFTGLPKPLFFAE--NRDRFAFAESKITYGTI-----P 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33695150   285 GR-----QDGWIADDYLRTFLTQdgVSRLRNLRPDDVFIIDDADEIPARDGVLFLKLYDGWTEPFAFHMRKSLYGFFWkq 359
Cdd:pfam04724 141 GRflkpgEDPFVEEAYQRVAMDQ--LLRRAGIEEGDLLIMSDVDEIPSAHTIELLRWCDGIPPVLHLQLRNYLYSFEF-- 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33695150   360 pgtlevvsgctmdmlqaVYGLDGIRLRRRQYYTMPNFRQYENRTGHILVQwslgsplhfAGWHCSWCF-TPEGIYFKLVS 438
Cdd:pfam04724 217 -----------------PVDYKSWRASVHRYQPGKTRYRHSRQSDVILAD---------AGWHCSFCFrHISEFVFKMKA 270
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 33695150   439 AQNGDFPRWGDYedkrdLNY--IRSLIRTGG-WFDGTQQEYPPAD------PSEHMYA----PKYLLKNYDQFRYLL 502
Cdd:pfam04724 271 YSHADRVRRSSL-----LNPkrIQDVICKGSdLFDMLPEEYTFKElikkmgPIPRSYSavhlPRYLLENAEKFRFLL 342
 
Name Accession Description Interval E-value
Glyco_transf_17 pfam04724
Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1, ...
205-502 7.47e-31

Glycosyltransferase family 17; This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression.


Pssm-ID: 428090  Cd Length: 349  Bit Score: 122.77  E-value: 7.47e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33695150   205 PREVPRRVINAININHEFDLLDVRFHELGDVVDAFVVCESNFTAYGEPRPLKFREmlTNGTFEYIRHKVLYVFLdhfppG 284
Cdd:pfam04724  68 LRESPRRVFDAVLFSNELDLLEIRWRELYPYVTQFVILESNTTFTGLPKPLFFAE--NRDRFAFAESKITYGTI-----P 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33695150   285 GR-----QDGWIADDYLRTFLTQdgVSRLRNLRPDDVFIIDDADEIPARDGVLFLKLYDGWTEPFAFHMRKSLYGFFWkq 359
Cdd:pfam04724 141 GRflkpgEDPFVEEAYQRVAMDQ--LLRRAGIEEGDLLIMSDVDEIPSAHTIELLRWCDGIPPVLHLQLRNYLYSFEF-- 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33695150   360 pgtlevvsgctmdmlqaVYGLDGIRLRRRQYYTMPNFRQYENRTGHILVQwslgsplhfAGWHCSWCF-TPEGIYFKLVS 438
Cdd:pfam04724 217 -----------------PVDYKSWRASVHRYQPGKTRYRHSRQSDVILAD---------AGWHCSFCFrHISEFVFKMKA 270
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 33695150   439 AQNGDFPRWGDYedkrdLNY--IRSLIRTGG-WFDGTQQEYPPAD------PSEHMYA----PKYLLKNYDQFRYLL 502
Cdd:pfam04724 271 YSHADRVRRSSL-----LNPkrIQDVICKGSdLFDMLPEEYTFKElikkmgPIPRSYSavhlPRYLLENAEKFRFLL 342
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH