NCBI Conserved Domain Search

Conserved domains on [gi|13937347|ref|NP_031878|]

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alpha-defensin 6/12 precursor [Mus musculus]

Protein Classification

Defensin_propep and Defensin_1 domain-containing protein( domain architecture ID 10467842)

Defensin_propep and Defensin_1 domain-containing protein

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

Defensin_propep

pfam00879

Defensin propeptide;

14-51

1.31e-15

Defensin propeptide;

Pssm-ID: 459976 Cd Length: 51 Bit Score: 64.17 E-value: 1.31e-15

                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 13937347   14 AFQVQADPIQNTDEETKTEEQPGEEDQAVSVSFGDPEG 51
Cdd:pfam00879 14 ALQAQAEPLQARADEAPDQEQPGAEDQDVSISFAGDES 51

Defensin_1

pfam00323

Mammalian defensin;

64-92

4.60e-10

Mammalian defensin;

Pssm-ID: 425607 Cd Length: 29 Bit Score: 49.91 E-value: 4.60e-10

                         10        20
                 ....*....|....*....|....*....
gi 13937347   64 CYCRARGCKGRERMNGTCRKGHLLYMLCC 92
Cdd:pfam00323  1 CYCRRGGCRFPERRSGTCTINGRRYRLCC 29

Name

Accession

Description

Interval

E-value

Defensin_propep

pfam00879

Defensin propeptide;

14-51

1.31e-15

Defensin propeptide;

Pssm-ID: 459976 Cd Length: 51 Bit Score: 64.17 E-value: 1.31e-15

                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 13937347   14 AFQVQADPIQNTDEETKTEEQPGEEDQAVSVSFGDPEG 51
Cdd:pfam00879 14 ALQAQAEPLQARADEAPDQEQPGAEDQDVSISFAGDES 51

Defensin_1

pfam00323

Mammalian defensin;

64-92

4.60e-10

Mammalian defensin;

Pssm-ID: 425607 Cd Length: 29 Bit Score: 49.91 E-value: 4.60e-10

                         10        20
                 ....*....|....*....|....*....
gi 13937347   64 CYCRARGCKGRERMNGTCRKGHLLYMLCC 92
Cdd:pfam00323  1 CYCRRGGCRFPERRSGTCTINGRRYRLCC 29

DEFSN

smart00048

Defensin/corticostatin family; Cysteine-rich domains that lyse bacteria, fungi and enveloped ...

64-92

5.35e-07

Defensin/corticostatin family; Cysteine-rich domains that lyse bacteria, fungi and enveloped viruses by forming multimeric membrane-spanning channels.

Pssm-ID: 128363 Cd Length: 29 Bit Score: 41.94 E-value: 5.35e-07

                          10        20
                  ....*....|....*....|....*....
gi 13937347    64 CYCRARGCKGRERMNGTCRKGHLLYMLCC 92
Cdd:smart00048  1 CYCRRRRCPRRERRIGTCRIRGRRYTFCC 29

Name

Accession

Description

Interval

E-value

Defensin_propep

pfam00879

Defensin propeptide;

14-51

1.31e-15

Defensin propeptide;

Pssm-ID: 459976 Cd Length: 51 Bit Score: 64.17 E-value: 1.31e-15

                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 13937347   14 AFQVQADPIQNTDEETKTEEQPGEEDQAVSVSFGDPEG 51
Cdd:pfam00879 14 ALQAQAEPLQARADEAPDQEQPGAEDQDVSISFAGDES 51

Defensin_1

pfam00323

Mammalian defensin;

64-92

4.60e-10

Mammalian defensin;

Pssm-ID: 425607 Cd Length: 29 Bit Score: 49.91 E-value: 4.60e-10

                         10        20
                 ....*....|....*....|....*....
gi 13937347   64 CYCRARGCKGRERMNGTCRKGHLLYMLCC 92
Cdd:pfam00323  1 CYCRRGGCRFPERRSGTCTINGRRYRLCC 29

DEFSN

smart00048

Defensin/corticostatin family; Cysteine-rich domains that lyse bacteria, fungi and enveloped ...

64-92

5.35e-07

Defensin/corticostatin family; Cysteine-rich domains that lyse bacteria, fungi and enveloped viruses by forming multimeric membrane-spanning channels.

Pssm-ID: 128363 Cd Length: 29 Bit Score: 41.94 E-value: 5.35e-07

                          10        20
                  ....*....|....*....|....*....
gi 13937347    64 CYCRARGCKGRERMNGTCRKGHLLYMLCC 92
Cdd:smart00048  1 CYCRRRRCPRRERRIGTCRIRGRRYTFCC 29

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01