NCBI Conserved Domain Search

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

503-769

4.56e-10

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 64.21 E-value: 4.56e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     503 TYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAP--AAISSTYTSSPSAPVAVSSTYTSSPSA 580
Cdd:pfam17823   95 TDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEAFSAPraAACRANASAAPRAAIAAASAPHAASPA 174

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     581 PVAISSTYTSSPSVPVAVSSTYTSSPSAPAaisstyTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPsvpVAVSSTYTS 660
Cdd:pfam17823  175 PRTAASSTTAASSTTAASSAPTTAASSAPA------TLTPARGISTAATATGHPAAGTALAAVGNSSP---AAGTVTAAV 245

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     661 SPSAPAAISSTYTSSPSVPVAVSSTYTSSPsapaaISSTYTSSPSAPVAVSStytsspSAPAAISSTYTSSPSAPVAVSS 740
Cdd:pfam17823  246 GTVTPAALATLAAAAGTVASAAGTINMGDP-----HARRLSPAKHMPSDTMA------RNPAAPMGAQAQGPIIQVSTDQ 314

                          250       260
                   ....*....|....*....|....*....
gi 6320628     741 TYTSSPSAPAAISSTYTSSPSAPVAVSST 769
Cdd:pfam17823  315 PVHNTAGEPTPSPSNTTLEPNTPKSVAST 343

KREPA2

cd23959

Kinetoplastid RNA Editing Protein A2 (KREPA2); The KREPA2 (TbMP63) protein is a component of ...

621-772

1.46e-04

Kinetoplastid RNA Editing Protein A2 (KREPA2); The KREPA2 (TbMP63) protein is a component of the parasitic protozoan's KREPA RNA editing catalytic complex (RECC). Kinetoplastid RNA editing (KRE) proteins occur as pairs or sets of related proteins in multiple complexes. KREPA complex is composed of six components (KREPA1-6), which share a conserved C-terminal region containing an oligonucleotide-binding (OB)-fold-like domain. KREPAs are responsible for the site-specific insertion and deletion of U nucleotides in the kinetoplastid mitochondria pre-messenger RNA. Apart from the conserved C-terminal OB-fold domain, KREPA1, KREPA2, and KREPA3 contain two conserved C2H2 zinc-finger domains. KREPA2 and kinetoplastid RNA editing ligase 1 (KREL1) are specific for ligation post-U-deletion and are paralogous to KREL2 and KREPA1 that are specific for ligation post-U-insertion. KREPA2, is critical for RECC stability and KREL1 integration into the complex.

Pssm-ID: 467780 [Multi-domain] Cd Length: 424 Bit Score: 46.40 E-value: 1.46e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   621 SAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPvavSSTYTSSPSAPAAISSTY 700
Cdd:cd23959   96 SDAFAMAPDESLGPFRAARVPNPFSASSSTQRETHKTAQVAPPKAEPQTAPVTPFGQLP---MFGQHPPPAKPLPAAAAA 172

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6320628   701 TSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 772
Cdd:cd23959  173 QQSSASPGEVASPFASGTVSASPFATATDTAPSSGAPDGFPAEASAPSPFAAPASAASFPAAPVANGEAATP 244

rad23

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

495-667

2.60e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.19 E-value: 2.60e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     495 SAPAAISSTYTSSPSAPvavSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 574
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATP---TSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAASTLV 151

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     575 TSSP--SAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSspsaPAAISSTYTSSPSVPV 652
Cdd:TIGR00601  152 VGSEreTTIEEIMEMGYEREEVERALRAAFNNPDRAVEYLLTGIPEDPEQPEPVQQTAAS----TAAATTETPQHGSVFE 227

                          170
                   ....*....|....*
gi 6320628     653 AVSSTYTSSPSAPAA 667
Cdd:TIGR00601  228 QAAQGGTEQPATEAA 242

myxo_dep_M36

NF038112

myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ...

452-665

4.58e-03

myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.

Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 41.95 E-value: 4.58e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    452 SSVPVAVSSTytSSPSASVVVPSAYASSPSVPVAVSSTYTSSpsAPAAISSTYTSSPSAPVA---------VSSTYTSSP 522
Cdd:NF038112 1321 SGPAVTLTGA--TTATATFTAPEVTADTQLTFTLTVSDGTAS--ATDTVTVTVRNVNRAPVAnagadqtvdERSTVTLSG 1396

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    523 SAP----AAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYT-----------SSPSAPVAVSSTYTSSPSAPVAissT 587
Cdd:NF038112 1397 SATdpdgDALTYAWTQTAGPTVTLTGADTATASFTAPEVAADTeltfqltvsadGQASADVTVTVTVRNVNRAPVA---H 1473

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    588 YTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSA--PVAVSSTYTSSPS--APAAISSTY---------TSSPSVPVAV 654
Cdd:NF038112 1474 AGESITVDEGSTVTLDASATDPDGDTLTYAWTQVAgpSVTLTGADSAKLTftAPEVSADTTltfsltvtdGSGSSGPVVV 1553

                         250
                  ....*....|.
gi 6320628    655 SSTYTSSPSAP 665
Cdd:NF038112 1554 TVTVKNVNRAP 1564

Name

Accession

Description

Interval

E-value

PHA03307

transcriptional regulator ICP4; Provisional

452-776

1.00e-16

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 86.76 E-value: 1.00e-16

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    452 SSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPvavsstytSSPSAPAAISST 531
Cdd:PHA03307   52 AVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGP--------SSPDPPPPTPPP 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    532 YTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAA 611
Cdd:PHA03307  124 ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAAS 203

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    612 ISSTYTSSPSAPVAVSSTYTSSPSAPA-AISSTYTSSPSV------------PVAVSSTYTSSPSAPAAISSTYTSSPSV 678
Cdd:PHA03307  204 PRPPRRSSPISASASSPAPAPGRSAADdAGASSSDSSSSEssgcgwgpenecPLPRPAPITLPTRIWEASGWNGPSSRPG 283

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    679 PVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPS-----APAAIS 753
Cdd:PHA03307  284 PASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSpsrppPPADPS 363

                         330       340
                  ....*....|....*....|...
gi 6320628    754 STYTSSPSAPVAvSSTYTSSPSA 776
Cdd:PHA03307  364 SPRKRPRPSRAP-SSPAASAGRP 385

PHA03247

large tegument protein UL36; Provisional

471-808

1.19e-14

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 80.37 E-value: 1.19e-14

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    471 VVPSAYASSPSVPVAVSSTytSSPSAPAAisstyTSSPSAPVAvsstytssPSAPAAISSTYTSSPSAPVAVSStytsSP 550
Cdd:PHA03247 2568 VPPPRPAPRPSEPAVTSRA--RRPDAPPQ-----SARPRAPVD--------DRGDPRGPAPPSPLPPDTHAPDP----PP 2628

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    551 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTyTSSPSAPAAisstytSSPSAPVAVSSTY 630
Cdd:PHA03247 2629 PSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSP-PQRPRRRAA------RPTVGSLTSLADP 2701

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    631 TSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAA-ISSTYTSSPSVPVAV----SSTYTSSPSAPAAISSTYTSSPS 705
Cdd:PHA03247 2702 PPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAApAPPAVPAGPATPGGParpaRPPTTAGPPAPAPPAAPAAGPPR 2781

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    706 A--PVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytsSPSAPVAVSSTYTSSPSALVVLSST 783
Cdd:PHA03247 2782 RltRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP-------PPTSAQPTAPPPPPGPPPPSLPLGG 2854

                         330       340
                  ....*....|....*....|....*
gi 6320628    784 STSSPYDIVYSPSTFAAISSGYTPS 808
Cdd:PHA03247 2855 SVAPGGDVRRRPPSRSPAAKPAAPA 2879

PHA03247

large tegument protein UL36; Provisional

454-763

4.80e-14

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 78.44 E-value: 4.80e-14

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    454 VPVAVSSTYTSSPSASVVVPSAYASSP--SVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISST 531
Cdd:PHA03247 2600 APVDDRGDPRGPAPPSPLPPDTHAPDPppPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSP 2679

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    532 YT--SSPSAPVAVSSTYTSS-----PSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVA-ISSTYTSSPSVPVAVSStyt 603
Cdd:PHA03247 2680 PQrpRRRAARPTVGSLTSLAdppppPPTPEPAPHALVSATPLPPGPAAARQASPALPAApAPPAVPAGPATPGGPAR--- 2756

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    604 ssPSAPAAisstyTSSPSAPVAVSSTYTSSPSA--PAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVA 681
Cdd:PHA03247 2757 --PARPPT-----TAGPPAPAPPAAPAAGPPRRltRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP 2829

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    682 VSSTYT-SSPSAPAAISSTYTS-----SPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPvAVSSTYTSSPSAPAAISST 755
Cdd:PHA03247 2830 PPTSAQpTAPPPPPGPPPPSLPlggsvAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARP-AVSRSTESFALPPDQPERP 2908


                  ....*...
gi 6320628    756 YTSSPSAP 763
Cdd:PHA03247 2909 PQPQAPPP 2916

PHA03247

large tegument protein UL36; Provisional

439-765

9.48e-14

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 77.29 E-value: 9.48e-14

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    439 FGVAPFPSAYISFSSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTyTSSPSAPAAisstytSSPSAPVAVSSTY 518
Cdd:PHA03247 2629 PSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSP-PQRPRRRAA------RPTVGSLTSLADP 2701

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    519 TSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytssPSAPVAVSSTYTSSPSAPVAISSTyTSSPSVPVAV 598
Cdd:PHA03247 2702 PPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAA--------PAPPAVPAGPATPGGPARPARPPT-TAGPPAPAPP 2772

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    599 SSTYTSSPSA--PAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYT-SSPSAPAAISSTYTS- 674
Cdd:PHA03247 2773 AAPAAGPPRRltRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQpTAPPPPPGPPPPSLPl 2852

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    675 ----SPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPvAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPS-AP 749
Cdd:PHA03247 2853 ggsvAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARP-AVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQpQP 2931

                         330
                  ....*....|....*.
gi 6320628    750 AAISSTYTSSPSAPVA 765
Cdd:PHA03247 2932 PPPPPPRPQPPLAPTT 2947

PHA03307

transcriptional regulator ICP4; Provisional

452-746

4.46e-13

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 74.82 E-value: 4.46e-13

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    452 SSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS--SPSAPAAIS 529
Cdd:PHA03307  156 GASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPgrSAADDAGAS 235

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    530 STYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSStytSSPSAP 609
Cdd:PHA03307  236 SSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSG---PAPSSP 312

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    610 AAISStytSSPSAPVAVSSTyTSSPSAPAAISSTYTSSPSvpvavSSTYTSSPSAPAAISSTYTSSPSVPvavsstytsS 689
Cdd:PHA03307  313 RASSS---SSSSRESSSSST-SSSSESSRGAAVSPGPSPS-----RSPSPSRPPPPADPSSPRKRPRPSR---------A 374

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628    690 PSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSP 746
Cdd:PHA03307  375 PSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYP 431

PHA03307

transcriptional regulator ICP4; Provisional

472-809

1.65e-11

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 69.81 E-value: 1.65e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    472 VPSAYASSPSVPVAVSSTYTSSPSAPAAisstytSSPSAPVAVSSTYTSSPSAPAaiSSTYTSSPSAPVAVSSTYTSSPS 551
Cdd:PHA03307   24 PPATPGDAADDLLSGSQGQLVSDSAELA------AVTVVAGAAACDRFEPPTGPP--PGPGTEAPANESRSTPTWSLSTL 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    552 APAAISSTYTSSPSAPvavsstytSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYT 631
Cdd:PHA03307   96 APASPAREGSPTPPGP--------SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAA 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    632 SSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTS--SPSAPAAISSTYTSSPSAPVA 709
Cdd:PHA03307  168 SSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPgrSAADDAGASSSDSSSSESSGC 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    710 VSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSALVVLSSTSTSSPY 789
Cdd:PHA03307  248 GWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS 327

                         330       340
                  ....*....|....*....|
gi 6320628    790 DIvySPSTFAAISSGYTPSP 809
Cdd:PHA03307  328 ST--SSSSESSRGAAVSPGP 345

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

591-809

6.31e-11

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 67.09 E-value: 6.31e-11

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   591 SPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSpsvpvavsSTYTSSPSAPAAISS 670
Cdd:COG3469    1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSA--------GSGTGTTAASSTAAT 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   671 TYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSAPA 750
Cdd:COG3469   73 SSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSST-AGSTTTSGASATSSAGSTTTTT 151

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 6320628   751 AISSTYTSSPSAPVAVSSTYTSSPSALVVLSSTSTSSPYDIVYSPSTFAAISSGYTPSP 809
Cdd:COG3469  152 TVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTP 210

PRK07003

DNA polymerase III subunit gamma/tau;

491-774

1.57e-10

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 66.41 E-value: 1.57e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    491 TSSPSAPAAisstyTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAvsstytsSPSAPAAISSTYTSSPSAPVAv 570
Cdd:PRK07003  362 VTGGGAPGG-----GVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAG-------AALAPKAAAAAAATRAEAPPA- 428

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    571 sstytssPSAPVAISSTYTSSPSVPVAVSSTyTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytSSPSV 650
Cdd:PRK07003  429 -------APAPPATADRGDDAADGDAPVPAK-ANARASADSRCDERDAQPPADSGSASAPASDAPPDAA------FEPAP 494

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    651 PVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSS---------PSAPVAVSSTYTSSPSAP 721
Cdd:PRK07003  495 RAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGgaaaaldvlRNAGMRVSSDRGARAAAA 574

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 6320628    722 AAISSTYTSSPSAPVAVSSTYTSSPSAPAAiSSTYTSSPSAPVAVSSTYTSSP 774
Cdd:PRK07003  575 AKPAAAPAAAPKPAAPRVAVQVPTPRARAA-TGDAPPNGAARAEQAAESRGAP 626

PRK07003

DNA polymerase III subunit gamma/tau;

452-718

2.21e-10

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 65.64 E-value: 2.21e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    452 SSVPVAVsstytssPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSA--PAAIS 529
Cdd:PRK07003  374 ARVAGAV-------PAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGddAADGD 446

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    530 STYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSAPVAISSTytsSPSVPVAVSSTYTSSPSAP 609
Cdd:PRK07003  447 APVPAKANARASADSRCDERDAQPPADSGS-ASAPASDAPPDAAFEPAPRAAAPSAAT---PAAVPDARAPAAASREDAP 522

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    610 AAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSpsvpVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSS 689
Cdd:PRK07003  523 AAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLRNAG----MRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPT 598

                         250       260
                  ....*....|....*....|....*....
gi 6320628    690 PSAPAAiSSTYTSSPSAPVAVSSTYTSSP 718
Cdd:PRK07003  599 PRARAA-TGDAPPNGAARAEQAAESRGAP 626

DUF5585

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

503-769

4.56e-10

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 64.21 E-value: 4.56e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     503 TYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAP--AAISSTYTSSPSAPVAVSSTYTSSPSA 580
Cdd:pfam17823   95 TDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEAFSAPraAACRANASAAPRAAIAAASAPHAASPA 174

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     581 PVAISSTYTSSPSVPVAVSSTYTSSPSAPAaisstyTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPsvpVAVSSTYTS 660
Cdd:pfam17823  175 PRTAASSTTAASSTTAASSAPTTAASSAPA------TLTPARGISTAATATGHPAAGTALAAVGNSSP---AAGTVTAAV 245

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     661 SPSAPAAISSTYTSSPSVPVAVSSTYTSSPsapaaISSTYTSSPSAPVAVSStytsspSAPAAISSTYTSSPSAPVAVSS 740
Cdd:pfam17823  246 GTVTPAALATLAAAAGTVASAAGTINMGDP-----HARRLSPAKHMPSDTMA------RNPAAPMGAQAQGPIIQVSTDQ 314

                          250       260
                   ....*....|....*....|....*....
gi 6320628     741 TYTSSPSAPAAISSTYTSSPSAPVAVSST 769
Cdd:pfam17823  315 PVHNTAGEPTPSPSNTTLEPNTPKSVAST 343

PRK07003

DNA polymerase III subunit gamma/tau;

477-746

5.29e-10

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 64.49 E-value: 5.29e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    477 ASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAvsstytsSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSA--PA 554
Cdd:PRK07003  371 GVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAG-------AALAPKAAAAAAATRAEAPPAAPAPPATADRGddAA 443

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    555 AISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTyTSSPSVPVAVSSTYTSSPSAPAAISSTytsSPSAPVAVSSTYTSSP 634
Cdd:PRK07003  444 DGDAPVPAKANARASADSRCDERDAQPPADSGS-ASAPASDAPPDAAFEPAPRAAAPSAAT---PAAVPDARAPAAASRE 519

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    635 SAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSpsvpVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 714
Cdd:PRK07003  520 DAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLRNAG----MRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQ 595

                         250       260       270
                  ....*....|....*....|....*....|..
gi 6320628    715 TSSPSAPAAiSSTYTSSPSAPVAVSSTYTSSP 746
Cdd:PRK07003  596 VPTPRARAA-TGDAPPNGAARAEQAAESRGAP 626

PHA03247

large tegument protein UL36; Provisional

442-760

6.78e-10

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 64.57 E-value: 6.78e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    442 APFPSAYISFSSVPVAVSSTYTSSPSASVV-VPSAYASSPSVPVAV----SSTYTSSPSAPAA----------------- 499
Cdd:PHA03247 2709 EPAPHALVSATPLPPGPAAARQASPALPAApAPPAVPAGPATPGGParpaRPPTTAGPPAPAPpaapaagpprrltrpav 2788

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    500 --ISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPvavssTYTSSPSAPaaisstytSSPSAPVAVSSTYTSS 577
Cdd:PHA03247 2789 asLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPP-----PTSAQPTAP--------PPPPGPPPPSLPLGGS 2855

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    578 --PSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSvPVAVS 655
Cdd:PHA03247 2856 vaPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRST-ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQ-PQPPP 2933

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    656 STYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSS--PSAPVAVSSTYTSSPSAPAAISSTYTS--- 730
Cdd:PHA03247 2934 PPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQpaPSREAPASSTPPLTGHSLSRVSSWASSlal 3013

                         330       340       350
                  ....*....|....*....|....*....|....
gi 6320628    731 ---SPSAPVAVSST-YTSSPSAPAAISSTYTSSP 760
Cdd:PHA03247 3014 heeTDPPPVSLKQTlWPPDDTEDSDADSLFDSDS 3047

PRK12323

DNA polymerase III subunit gamma/tau;

495-698

1.67e-09

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 62.97 E-value: 1.67e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    495 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 574
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    575 TSSPSAPVAISSTYTSSPsVPVAVSSTYTSSPSAPAAISSTYTSSP------SAPVAVSSTYTSSPsAPAAISSTYTSSP 648
Cdd:PRK12323  452 PAPAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAAAPAPADDDPppweelPPEFASPAPAQPDA-APAGWVAESIPDP 529

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 6320628    649 SVPVAVSSTYTSSPSAPAAisstytssPSVPVAVSSTYTSSPSAPAAISS 698
Cdd:PRK12323  530 ATADPDDAFETLAPAPAAA--------PAPRAAAATEPVVAPRPPRASAS 571

PRK12323

DNA polymerase III subunit gamma/tau;

506-726

4.60e-09

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 61.43 E-value: 4.60e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    506 SSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISstytsspSAPVAVSSTYTSSPSAPVAIS 585
Cdd:PRK12323  376 TAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRS-------PAPEALAAARQASARGPGGAP 448

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    586 STYTSSPSVPVAVSSTYTSSPSAPAAiSSTYTSSPSAPVAvsstytssPSAPAAISSTYTSSPSVPVAVSSTYTSSPsAP 665
Cdd:PRK12323  449 APAPAPAAAPAAAARPAAAGPRPVAA-AAAAAPARAAPAA--------APAPADDDPPPWEELPPEFASPAPAQPDA-AP 518

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6320628    666 AAISSTYTSSPSVPVAVSSTYTSSPSAPAAisstytssPSAPVAVSSTYTSSPSAPAAISS 726
Cdd:PRK12323  519 AGWVAESIPDPATADPDDAFETLAPAPAAA--------PAPRAAAATEPVVAPRPPRASAS 571

DUF5585

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

459-775

5.45e-09

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 60.74 E-value: 5.45e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     459 SSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTytsspsaPAAISSTYTSSPSA 538
Cdd:pfam17823  124 SSAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASST-------TAASSTTAASSAPT 196

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     539 PVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTS 618
Cdd:pfam17823  197 TAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPH 276

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     619 SPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISS 698
Cdd:pfam17823  277 ARRLSPAKHMPSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAK 356

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     699 TYTSSPSAPVAVSSTYTSSPSAPAAISST--YTSSPSAPVAVSSTYTSSPSAPAAISST-YTSSPSAPVAVSSTYTSSPS 775
Cdd:pfam17823  357 EPSASPVPVLHTSMIPEVEATSPTTQPSPllPTQGAAGPGILLAPEQVATEATAGTASAgPTPRSSGDPKTLAMASCQLS 436

PRK12323

DNA polymerase III subunit gamma/tau;

464-670

6.80e-09

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 60.66 E-value: 6.80e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    464 SSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISStyTSSPSAPVAVSSTYTSSPsAPAAISSTYTSSPSAPVAVS 543
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAP--AAAAAARAVAAAPARRSP-APEALAAARQASARGPGGAP 448

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    544 STYTSSPSAPAAISSTYTSSPsAPVAVSSTYTSSPSAPVAISSTYTSSP------SVPVAVSSTYTSSPsAPAAISSTYT 617
Cdd:PRK12323  449 APAPAPAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAAAPAPADDDPppweelPPEFASPAPAQPDA-APAGWVAESI 526

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 6320628    618 SSPSAPVAVSSTYTSSPSAPAAisstytssPSVPVAVSSTYTSSPSAPAAISS 670
Cdd:PRK12323  527 PDPATADPDDAFETLAPAPAAA--------PAPRAAAATEPVVAPRPPRASAS 571

PRK12323

DNA polymerase III subunit gamma/tau;

548-754

1.09e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 60.27 E-value: 1.09e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    548 SSPSAPAAISstyTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 627
Cdd:PRK12323  372 AGPATAAAAP---VAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAP 448

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    628 STYTSSPSAPAAISSTYTSSPsVPVAVSSTYTSSPSAPAAISSTYTSSP------SVPVAVSSTYTSSPsAPAAISSTYT 701
Cdd:PRK12323  449 APAPAPAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAAAPAPADDDPppweelPPEFASPAPAQPDA-APAGWVAESI 526

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 6320628    702 SSPSAPVAVSSTYTSSPSAPAAisstytssPSAPVAVSSTYTSSPSAPAAISS 754
Cdd:PRK12323  527 PDPATADPDDAFETLAPAPAAA--------PAPRAAAATEPVVAPRPPRASAS 571

PRK07003

DNA polymerase III subunit gamma/tau;

519-776

1.77e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 59.48 E-value: 1.77e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    519 TSSPSAPAAisstyTSSPSAPVAVSStytSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAV 598
Cdd:PRK07003  362 VTGGGAPGG-----GVPARVAGAVPA---PGARAAAAVGAS-AVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAP 432

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    599 SSTYTSSpSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPSVPVAVSSTYTSSPSAPAAISSTytsSPSV 678
Cdd:PRK07003  433 PATADRG-DDAADGDAPVPAKANARASADSRCDERDAQPPADSGS-ASAPASDAPPDAAFEPAPRAAAPSAAT---PAAV 507

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    679 PVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYtsspSAPVAVSSTYTSSPSAPAAISSTYTS 758
Cdd:PRK07003  508 PDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLR----NAGMRVSSDRGARAAAAAKPAAAPAA 583

                         250
                  ....*....|....*...
gi 6320628    759 SPSAPVAVSSTYTSSPSA 776
Cdd:PRK07003  584 APKPAAPRVAVQVPTPRA 601

PRK12323

DNA polymerase III subunit gamma/tau;

551-751

1.92e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 59.50 E-value: 1.92e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    551 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 630
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    631 TSSPSAPAAISSTYTSSPsVPVAVSSTYTSSPSAPAAISSTYTSSPS------VPVAVSSTYTSSPsAPAAISSTYTSSP 704
Cdd:PRK12323  452 PAPAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAAAPAPADDDPPpweelpPEFASPAPAQPDA-APAGWVAESIPDP 529

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 6320628    705 S---APVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAA 751
Cdd:PRK12323  530 AtadPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDG 579

PRK12323

DNA polymerase III subunit gamma/tau;

440-642

2.18e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 59.12 E-value: 2.18e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    440 GVAPFPSAYISFSSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYT 519
Cdd:PRK12323  373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    520 SSPSAPAAISSTYTSSPsAPVAVSSTYTSSPSAPAAISSTYTSSP------SAPVAVSSTYTSSPsAPVAISSTYTSSPS 593
Cdd:PRK12323  453 APAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAAAPAPADDDPppweelPPEFASPAPAQPDA-APAGWVAESIPDPA 530

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 6320628    594 VPVAVSSTYTSSPSAPAAisstytssPSAPVAVSSTYTSSPSAPAAISS 642
Cdd:PRK12323  531 TADPDDAFETLAPAPAAA--------PAPRAAAATEPVVAPRPPRASAS 571

PHA03307

transcriptional regulator ICP4; Provisional

492-809

2.55e-08

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.41 E-value: 2.55e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    492 SSPSAPAAISSTytssPSAPVAVSSTYTSSPSAPAAisstytSSPSAPVAVSSTYTSSPSAPAaiSSTYTSSPSAPVAVS 571
Cdd:PHA03307   20 FFPRPPATPGDA----ADDLLSGSQGQLVSDSAELA------AVTVVAGAAACDRFEPPTGPP--PGPGTEAPANESRST 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    572 STYTSSPSAPVAISSTYTSSPSVPvavsstytSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVP 651
Cdd:PHA03307   88 PTWSLSTLAPASPAREGSPTPPGP--------SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASP 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    652 VAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS--SPSAPAAISSTYT 729
Cdd:PHA03307  160 AAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPgrSAADDAGASSSDS 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    730 SSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSALVVLSSTSTSSPydivySPStfAAISSGYTPSP 809
Cdd:PHA03307  240 SSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSP-----SPS--SPGSGPAPSSP 312

PLN02217

probable pectinesterase/pectinesterase inhibitor

665-772

4.53e-08

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 58.18 E-value: 4.53e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    665 PAAISSTYTSSpsvpvAVSSTYTSSPSAPAAISSTYTSSPSapvavsSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 744
Cdd:PLN02217  566 PGSTNSTPTGS-----AASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPS 634

                          90       100
                  ....*....|....*....|....*...
gi 6320628    745 SPSAPAAISSTYTSSPSAPVAVSSTYTS 772
Cdd:PLN02217  635 SPESSIKVASTETASPESSIKVASTESS 662

PLN02217

probable pectinesterase/pectinesterase inhibitor

637-744

4.53e-08

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 58.18 E-value: 4.53e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    637 PAAISSTYTSSpsvpvAVSSTYTSSPSAPAAISSTYTSSPsvpvavSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 716
Cdd:PLN02217  566 PGSTNSTPTGS-----AASSNTTFSSDSPSTVVAPSTSPP------AGHLGSPPATPSKIVSPSTSPPASHLGSPSTTPS 634

                          90       100
                  ....*....|....*....|....*...
gi 6320628    717 SPSAPAAISSTYTSSPSAPVAVSSTYTS 744
Cdd:PLN02217  635 SPESSIKVASTETASPESSIKVASTESS 662

PHA03307

transcriptional regulator ICP4; Provisional

438-718

6.55e-08

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 57.87 E-value: 6.55e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    438 HFGVAPFPsayisfsSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAvsstyTSSPSAPAAISSTYTSSPSAPVAVSST 517
Cdd:PHA03307  184 RAPSSPPA-------EPPPSTPPAAASPRPPRRSSPISASASSPAPAP-----GRSAADDAGASSSDSSSSESSGCGWGP 251

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    518 YTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstyTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVA 597
Cdd:PHA03307  252 ENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSS-----SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSS 326

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    598 VSSTYTSSPSAPAAISSTYTSSPSAPvavsstyTSSPSAPAAISSTYTSSPSVPvavsstytsSPSAPAAISSTYTSSPS 677
Cdd:PHA03307  327 SSTSSSSESSRGAAVSPGPSPSRSPS-------PSRPPPPADPSSPRKRPRPSR---------APSSPAASAGRPTRRRA 390

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 6320628    678 VPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSP 718
Cdd:PHA03307  391 RAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYP 431

PRK12323

DNA polymerase III subunit gamma/tau;

576-763

6.65e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.58 E-value: 6.65e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    576 SSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISStyTSSPSAPVAVSSTYTSSPsAPAAISSTYTSSPSVPVAVS 655
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAP--AAAAAARAVAAAPARRSP-APEALAAARQASARGPGGAP 448

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    656 STYTSSPSAPAAISSTYTSSPsVPVAVSSTYTSSPSAPAAISSTYTSSP------SAPVAVSSTYTSSPS-APAAISSTY 728
Cdd:PRK12323  449 APAPAPAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAAAPAPADDDPppweelPPEFASPAPAQPDAApAGWVAESIP 527

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 6320628    729 TSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAP 763
Cdd:PRK12323  528 DPATADPDDAFETLAPAPAAAPAPRAAAATEPVVA 562

PLN02217

probable pectinesterase/pectinesterase inhibitor

497-604

7.95e-08

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 57.41 E-value: 7.95e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    497 PAAISSTYTSSpsapvAVSSTYTSSPSAPAAISSTYTSSPSapvavsSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 576
Cdd:PLN02217  566 PGSTNSTPTGS-----AASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPS 634

                          90       100
                  ....*....|....*....|....*...
gi 6320628    577 SPSAPVAISSTYTSSPSVPVAVSSTYTS 604
Cdd:PLN02217  635 SPESSIKVASTETASPESSIKVASTESS 662

PRK12323

DNA polymerase III subunit gamma/tau;

607-807

8.02e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.19 E-value: 8.02e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    607 SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTY 686
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    687 TSSPSAPAAISSTYTSSPsAPVAVSSTYTSSPSAPAAISSTYTSSP------SAPVAVSSTYTSSPS-APAAISSTYTSS 759
Cdd:PRK12323  452 PAPAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAAAPAPADDDPppweelPPEFASPAPAQPDAApAGWVAESIPDPA 530

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 6320628    760 PSAPVAVSSTYTSSPSALVVLSSTSTSSPydiVYSPSTFAAISSGYTP 807
Cdd:PRK12323  531 TADPDDAFETLAPAPAAAPAPRAAAATEP---VVAPRPPRASASGLPD 575

PRK07003

DNA polymerase III subunit gamma/tau;

440-693

8.96e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 57.17 E-value: 8.96e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    440 GVAPFPSAyisfssVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSP---SAPAAISSTYTSSPSAPVAVSS 516
Cdd:PRK07003  378 GAVPAPGA------RAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPpaaPAPPATADRGDDAADGDAPVPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    517 tytsSPSAPAAISSTYTSSPSAPVAVSSTytssPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPV 596
Cdd:PRK07003  452 ----KANARASADSRCDERDAQPPADSGS----ASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPA 523

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    597 AVSSTYTSSPSAPAAISSTYTSSPSAPVA----------VSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPA 666
Cdd:PRK07003  524 AAAPPAPEARPPTPAAAAPAARAGGAAAAldvlrnagmrVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARA 603

                         250       260
                  ....*....|....*....|....*..
gi 6320628    667 AISstytSSPSVPVAVSSTYTSSPSAP 693
Cdd:PRK07003  604 ATG----DAPPNGAARAEQAAESRGAP 626

PLN02217

probable pectinesterase/pectinesterase inhibitor

525-632

9.11e-08

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 57.02 E-value: 9.11e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    525 PAAISSTYTSSpsapvAVSSTYTSSPSAPAAISSTYTSSPSapvavsSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTS 604
Cdd:PLN02217  566 PGSTNSTPTGS-----AASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPS 634

                          90       100
                  ....*....|....*....|....*...
gi 6320628    605 SPSAPAAISSTYTSSPSAPVAVSSTYTS 632
Cdd:PLN02217  635 SPESSIKVASTETASPESSIKVASTESS 662

PLN02217

probable pectinesterase/pectinesterase inhibitor

609-716

9.59e-08

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 57.02 E-value: 9.59e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    609 PAAISSTYTSSpsapvAVSSTYTSSPSAPAAISSTYTSSPSvpvavsSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTS 688
Cdd:PLN02217  566 PGSTNSTPTGS-----AASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPS 634

                          90       100
                  ....*....|....*....|....*...
gi 6320628    689 SPSAPAAISSTYTSSPSAPVAVSSTYTS 716
Cdd:PLN02217  635 SPESSIKVASTETASPESSIKVASTESS 662

PRK12323

DNA polymerase III subunit gamma/tau;

589-776

1.37e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.42 E-value: 1.37e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    589 TSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSStytSSPSAPAAISSTYTSSPSvPVAVSSTYTSSPSAPAAI 668
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPA---AAAAARAVAAAPARRSPA-PEALAAARQASARGPGGA 447

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    669 SSTYTSSPSVPVAVSSTYTSSPSAPAAiSSTYTSSPSAPVAVSST-------YTSSPSAPAAISSTYTSSPSAPVAVSST 741
Cdd:PRK12323  448 PAPAPAPAAAPAAAARPAAAGPRPVAA-AAAAAPARAAPAAAPAPadddpppWEELPPEFASPAPAQPDAAPAGWVAESI 526

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 6320628    742 YTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSA 776
Cdd:PRK12323  527 PDPATADPDDAFETLAPAPAAAPAPRAAAATEPVV 561

DUF5585

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

505-823

1.63e-07

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 56.12 E-value: 1.63e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     505 TSSPSAPVavssTYTSSPSApAAISSTYTSSPSAPvavSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAI 584
Cdd:pfam17823   63 ATAAPAPV----TLTKGTSA-AHLNSTEVTAEHTP---HGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAI 134

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     585 SSTYTSSPSVPVAV--SSTYTSSPSAPAAISSTYTSSPSAPvavsstYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSP 662
Cdd:pfam17823  135 AALPSEAFSAPRAAacRANASAAPRAAIAAASAPHAASPAP------RTAASSTTAASSTTAASSAPTTAASSAPATLTP 208

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     663 SAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 742
Cdd:pfam17823  209 ARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPS 288

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     743 TSSPSAPAAISSTYTSSPSAPVAVSS---TYTSSPSALVVLSSTSTSSPYDIVYSPSTFAAISSGYTPSPSASVAMSSTS 819
Cdd:pfam17823  289 DTMARNPAAPMGAQAQGPIIQVSTDQpvhNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHT 368


                   ....
gi 6320628     820 SSSP 823
Cdd:pfam17823  369 SMIP 372

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

463-760

2.25e-07

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 56.08 E-value: 2.25e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     463 TSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPA------AISSTYTSSP 536
Cdd:pfam05109  370 SGTPSGCENISGAFASNRTFDITVSGLGTAPKTLIITRTATNATTTTHKVIFSKAPESTTTSPTlnttgfAAPNTTTGLP 449

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     537 SApVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTY 616
Cdd:pfam05109  450 SS-THVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVT 528

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     617 TSSPSApvavsSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAI 696
Cdd:pfam05109  529 TPTPNA-----TSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQAN 603

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6320628     697 SSTYT--SSPSAPVaVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSP 760
Cdd:pfam05109  604 TTNHTlgGTSSTPV-VTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMP 668

PLN02217

probable pectinesterase/pectinesterase inhibitor

451-548

2.49e-07

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 55.87 E-value: 2.49e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    451 FSSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVS---STYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAA 527
Cdd:PLN02217  562 FAGNPGSTNSTPTGSAASSNTTFSSDSPSTVVAPSTSppaGHLGSPPATPSKIVSPSTSPPASHLGSPSTTPSSPESSIK 641

                          90       100
                  ....*....|....*....|.
gi 6320628    528 ISSTYTSSPSAPVAVSSTYTS 548
Cdd:PLN02217  642 VASTETASPESSIKVASTESS 662

PLN02217

probable pectinesterase/pectinesterase inhibitor

553-660

2.92e-07

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 55.48 E-value: 2.92e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    553 PAAISSTYTSSpsapvAVSSTYTSSPSAPVAISSTYTSSPSvpvavsSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 632
Cdd:PLN02217  566 PGSTNSTPTGS-----AASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPS 634

                          90       100
                  ....*....|....*....|....*...
gi 6320628    633 SPSAPAAISSTYTSSPSVPVAVSSTYTS 660
Cdd:PLN02217  635 SPESSIKVASTETASPESSIKVASTESS 662

PRK12323

DNA polymerase III subunit gamma/tau;

579-776

3.07e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.27 E-value: 3.07e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    579 SAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTY 658
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    659 TSSPSAPAAISSTYTSSPsVPVAVSSTYTSSPSAPAAisstytsSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAV 738
Cdd:PRK12323  452 PAPAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAA-------APAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVA 523

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 6320628    739 SSTYTSSPSAPAAISSTYTSSPSA-PVAVSSTYTSSPSA 776
Cdd:PRK12323  524 ESIPDPATADPDDAFETLAPAPAAaPAPRAAAATEPVVA 562

PLN02217

probable pectinesterase/pectinesterase inhibitor

447-576

3.47e-07

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 55.10 E-value: 3.47e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    447 AYISFSSVPVaVSSTYTSSPSASVVVPSAYASSpsvpvavsSTYTSSPSAPAAISSTYTSSPSapvavsSTYTSSPSAPA 526
Cdd:PLN02217  548 AWIPGKGVPY-IPGLFAGNPGSTNSTPTGSAAS--------SNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPS 612

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 6320628    527 AISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 576
Cdd:PLN02217  613 KIVSPSTSPPASHLGSPSTTPSSPESSIKVASTETASPESSIKVASTESS 662

DUF5585

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

445-747

3.56e-07

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 54.97 E-value: 3.56e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     445 PSAYISFSSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSA 524
Cdd:pfam17823  131 PAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPAR 210

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     525 PAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTS 604
Cdd:pfam17823  211 GISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDT 290

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     605 SPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPsVPVAVSS 684
Cdd:pfam17823  291 MARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASP-VPVLHTS 369

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6320628     685 TY-----TSSPSAPAAISSTY-TSSPSAPVAVSSTYTSspSAPAAISSTYTSSPSAPVAVSSTYTSSPS 747
Cdd:pfam17823  370 MIpeveaTSPTTQPSPLLPTQgAAGPGILLAPEQVATE--ATAGTASAGPTPRSSGDPKTLAMASCQLS 436

PLN02217

probable pectinesterase/pectinesterase inhibitor

480-597

3.81e-07

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 55.10 E-value: 3.81e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    480 PSVPVAVSSTYTSSPSAP--AAISSTYTSSPSAPVAVSSTYTSSPSapaaisSTYTSSPSAPVAVSSTYTSSPSAPAAIS 557
Cdd:PLN02217  556 PYIPGLFAGNPGSTNSTPtgSAASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSP 629

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 6320628    558 STYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVA 597
Cdd:PLN02217  630 STTPSSPESSIKVASTETASPESSIKVASTESSVSMVSMS 669

PTZ00436

60S ribosomal protein L19-like protein; Provisional

608-765

6.78e-07

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 53.42 E-value: 6.78e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    608 APAAISSTYTSSPSAPVAVSSTYTSSPSAP--AAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSST 685
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAPakAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPA 272

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    686 YTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISStyTSSPSAPVA 765
Cdd:PTZ00436  273 KAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPP--AKAAAAPVG 350

PLN02217

probable pectinesterase/pectinesterase inhibitor

581-688

6.85e-07

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 54.32 E-value: 6.85e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    581 PVAISSTYTSSpsvpvAVSSTYTSSPSAPAAISSTYTSSPSapvavsSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTS 660
Cdd:PLN02217  566 PGSTNSTPTGS-----AASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPS 634

                          90       100
                  ....*....|....*....|....*...
gi 6320628    661 SPSAPAAISSTYTSSPSVPVAVSSTYTS 688
Cdd:PLN02217  635 SPESSIKVASTETASPESSIKVASTESS 662

COG4935

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ...

303-773

9.76e-07

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];

Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 53.67 E-value: 9.76e-07

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   303 RVAVGVSRPSSITQTTSIDSFSMSEVELSTYYDLSAGNYPDQELIVDRPATSSTAETSSEASQGVSRESNTFAVSSISTT 382
Cdd:COG4935   88 ATVVGAALGVVAVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVAAVAGAAG 167

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   383 NFIVSSASDTVVSTSSTNTVPYSSVHSTFVHATSSSTYISSSLYSSPSLSASVSSHFGVAPFPSAYISFSSVPVAVSSTY 462
Cdd:COG4935  168 GGGGVGVAAAVGVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAAAAGVGGL 247

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   463 TSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAV 542
Cdd:COG4935  248 GAAATAAAADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGSAAA 327

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   543 SSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSA 622
Cdd:COG4935  328 AGAAAAAAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASAAGA 407

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   623 PVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTS 702
Cdd:COG4935  408 VGAGTAAGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSTTAAAAAAA 487

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6320628   703 SPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSS 773
Cdd:COG4935  488 AGLATTAAVAAGAAGAAAAAATAASVGGATGAAGTTNSTATFSNTTDVAIPDNGPAGVTSTITVSGGGAVE 558

PTZ00436

60S ribosomal protein L19-like protein; Provisional

496-650

9.97e-07

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 53.03 E-value: 9.97e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    496 APAAISSTYTSSPSAPVAVSSTYTSSPSAP--AAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSST 573
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAPakAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPA 272

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628    574 YTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSV 650
Cdd:PTZ00436  273 KAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPV 349

PLN02217

probable pectinesterase/pectinesterase inhibitor

519-618

1.38e-06

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 53.17 E-value: 1.38e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    519 TSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSapaaisSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAV 598
Cdd:PLN02217  570 NSTPTGSAASSNT-TFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPSSPESSIKV 642

                          90       100
                  ....*....|....*....|
gi 6320628    599 SSTYTSSPSAPAAISSTYTS 618
Cdd:PLN02217  643 ASTETASPESSIKVASTESS 662

PRK12323

DNA polymerase III subunit gamma/tau;

635-823

1.47e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 53.34 E-value: 1.47e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    635 SAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 714
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    715 TSSPSAPAAISSTYTSSPsAPVAVSSTYTSSPSAPAAISSTYTSSP----SAPVAVSSTYTSSPSALVVLSSTSTSSPYD 790
Cdd:PRK12323  452 PAPAAAPAAAARPAAAGP-RPVAAAAAAAPARAAPAAAPAPADDDPppweELPPEFASPAPAQPDAAPAGWVAESIPDPA 530

                         170       180       190
                  ....*....|....*....|....*....|...
gi 6320628    791 IVYSPSTFAAISSGYTPSPSASVAMSSTSSSSP 823
Cdd:PRK12323  531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAP 563

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

477-600

1.52e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 53.18 E-value: 1.52e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    477 ASSPSVPVAVSSTYTS-SPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAA 555
Cdd:PRK14951  368 AAAEAAAPAEKKTPARpEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVAL 447

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 6320628    556 ISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSS 600
Cdd:PRK14951  448 APAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PLN02217

probable pectinesterase/pectinesterase inhibitor

547-653

1.93e-06

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 52.78 E-value: 1.93e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    547 TSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSapvaisSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAV 626
Cdd:PLN02217  570 NSTPTGSAASSNT-TFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPSSPESSIKV 642

                          90       100
                  ....*....|....*....|....*..
gi 6320628    627 SSTYTSSPSAPAAISSTYTSSPSVPVA 653
Cdd:PLN02217  643 ASTETASPESSIKVASTESSVSMVSMS 669

PRK07764

DNA polymerase III subunits gamma and tau; Validated

452-809

2.13e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 52.68 E-value: 2.13e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    452 SSVPVAVSSTY-TSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISS 530
Cdd:PRK07764  383 RRLGVAGGAGApAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAP 462

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    531 TYTSSPSAPVAVSSTYTSSPSAPAAisstytSSPSAPVAVSSTyTSSPSAPVAISSTYTSSPSVPVAVS--STYTSSPSA 608
Cdd:PRK07764  463 SAQPAPAPAAAPEPTAAPAPAPPAA------PAPAAAPAAPAA-PAAPAGADDAATLRERWPEILAAVPkrSRKTWAILL 535

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    609 PAA---------ISSTYTSSPSA-------------------------PVAVSSTYTSS---PSAPAAISSTYTSSPSVP 651
Cdd:PRK07764  536 PEAtvlgvrgdtLVLGFSTGGLArrfaspgnaevlvtalaeelggdwqVEAVVGPAPGAaggEGPPAPASSGPPEEAARP 615

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    652 VAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSS 731
Cdd:PRK07764  616 AAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAG 695

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6320628    732 PSAPVAVSSTYTSSPSAPAAisSTYTSSPSAPVAVSSTYTSSPSALVVLSSTSTSSPYDIVYSPSTFAAISSGYTPSP 809
Cdd:PRK07764  696 AAPAQPAPAPAATPPAGQAD--DPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPA 771

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

477-773

2.18e-06

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.85 E-value: 2.18e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     477 ASSPSVPVAVSSTYTSSPSA--------PAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 548
Cdd:pfam03154  143 STSPSIPSPQDNESDSDSSAqqqilqtqPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQ 222

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     549 SPSAP-AAISSTYT------SSPSAPVavssTYTSSPSAPVAISSTYTSSPSV---------PVAVSSTYTSSPSAPAAI 612
Cdd:pfam03154  223 STAAPhTLIQQTPTlhpqrlPSPHPPL----QPMTQPPPPSQVSPQPLPQPSLhgqmppmphSLQTGPSHMQHPVPPQPF 298

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     613 SSTYTSS---------PSAPVAVSSTYTSSPSAPAAISST---------------------YTSSPSVPVAVSSTYTSSP 662
Cdd:pfam03154  299 PLTPQSSqsqvppgpsPAAPGQSQQRIHTPPSQSQLQSQQppreqplppaplsmphikpppTTPIPQLPNPQSHKHPPHL 378

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     663 SAPAAIS--STYTSSPSV-PVAVSSTYTSSPSAPAAISSTYTSSP-SAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAV 738
Cdd:pfam03154  379 SGPSPFQmnSNLPPPPALkPLSSLSTHHPPSAHPPPLQLMPQSQQlPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPS 458

                          330       340       350
                   ....*....|....*....|....*....|....*
gi 6320628     739 SSTYTSSPSAPAaiSSTYTSSPSAPVAVSSTYTSS 773
Cdd:pfam03154  459 QSPFPQHPFVPG--GPPPITPPSGPPTSTSSAMPG 491

PTZ00436

60S ribosomal protein L19-like protein; Provisional

605-755

2.61e-06

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 51.87 E-value: 2.61e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    605 SPSAPAAISSTYTSSPSAPVAVSSTYTSSPsAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSS 684
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6320628    685 TYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSP----SAPVAVSSTYTSSPSAPAAISST 755
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPpakaAAPPAKAATPPAKAAAPPAKAAA 346

PTZ00436

60S ribosomal protein L19-like protein; Provisional

493-643

2.61e-06

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 51.87 E-value: 2.61e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    493 SPSAPAAISSTYTSSPSAPVAVSSTYTSSPsAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 572
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6320628    573 TYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSP----SAPVAVSSTYTSSPSAPAAISST 643
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPpakaAAPPAKAATPPAKAAAPPAKAAA 346

PLN02217

probable pectinesterase/pectinesterase inhibitor

659-758

2.70e-06

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 52.40 E-value: 2.70e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    659 TSSPSAPAAISSTYTSSPSvPVAVSSTYTSSPSapaaisSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAV 738
Cdd:PLN02217  570 NSTPTGSAASSNTTFSSDS-PSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPSSPESSIKV 642

                          90       100
                  ....*....|....*....|
gi 6320628    739 SSTYTSSPSAPAAISSTYTS 758
Cdd:PLN02217  643 ASTETASPESSIKVASTESS 662

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

646-768

3.01e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.02 E-value: 3.01e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    646 SSPSVPVAVSSTYTS-SPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAI 724
Cdd:PRK14951  369 AAEAAAPAEKKTPARpEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 6320628    725 SSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 768
Cdd:PRK14951  449 PAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PLN02217

probable pectinesterase/pectinesterase inhibitor

592-702

3.20e-06

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 52.01 E-value: 3.20e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    592 PSVPVAVSSTYTSSPSAP--AAISSTYTSSPSAPVAVSSTYTSSPSapaaisSTYTSSPSVPVAVSSTYTSSPSAPAAIS 669
Cdd:PLN02217  556 PYIPGLFAGNPGSTNSTPtgSAASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSP 629

                          90       100       110
                  ....*....|....*....|....*....|...
gi 6320628    670 STYTSSPSVPVAVSSTYTSSPSAPAAISSTYTS 702
Cdd:PLN02217  630 STTPSSPESSIKVASTETASPESSIKVASTESS 662

PTZ00436

60S ribosomal protein L19-like protein; Provisional

524-678

3.37e-06

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 51.49 E-value: 3.37e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    524 APAAISSTYTSSPSAPVAVSSTYTSSPSAP--AAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSST 601
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAPakAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPA 272

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628    602 YTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSV 678
Cdd:PTZ00436  273 KAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPV 349

PLN02217

probable pectinesterase/pectinesterase inhibitor

631-730

3.54e-06

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 52.01 E-value: 3.54e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    631 TSSPSAPAAISSTYTSSPSvPVAVSSTYTSSPSapaaisSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAV 710
Cdd:PLN02217  570 NSTPTGSAASSNTTFSSDS-PSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPSSPESSIKV 642

                          90       100
                  ....*....|....*....|
gi 6320628    711 SSTYTSSPSAPAAISSTYTS 730
Cdd:PLN02217  643 ASTETASPESSIKVASTESS 662

PRK07764

DNA polymerase III subunits gamma and tau; Validated

445-795

3.55e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.91 E-value: 3.55e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    445 PSAYISFSSVPV---AVSSTYTSSPSASVVVPSAYASSPSVPVAvsstyTSSPSAPAAISSTYTSSPSAPVAVSSTYTSS 521
Cdd:PRK07764  365 PSASDDERGLLArleRLERRLGVAGGAGAPAAAAPSAAAAAPAA-----APAPAAAAPAAAAAPAPAAAPQPAPAPAPAP 439

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    522 PSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSS-------PSV 594
Cdd:PRK07764  440 APPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAatlrerwPEI 519

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    595 PVAVS--STYTSSPSAPAA---------ISSTYTSSPSA-------------------------------PVAVSSTYTS 632
Cdd:PRK07764  520 LAAVPkrSRKTWAILLPEAtvlgvrgdtLVLGFSTGGLArrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEG 599

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    633 SPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 712
Cdd:PRK07764  600 PPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPA 679

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    713 TYTSSPSAPAaisstytssPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSALVVLSSTSTSSPYDIV 792
Cdd:PRK07764  680 APPPAPAPAA---------PAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPD 750


                  ...
gi 6320628    793 YSP 795
Cdd:PRK07764  751 PAG 753

PTZ00436

60S ribosomal protein L19-like protein; Provisional

580-737

3.55e-06

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 51.49 E-value: 3.55e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    580 APVAISSTYTSSPSVPVAVSSTYTSSPSAP--AAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSST 657
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAPakAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPA 272

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    658 YTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISStyTSSPSAPVA 737
Cdd:PTZ00436  273 KAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPP--AKAAAAPVG 350

PRK07003

DNA polymerase III subunit gamma/tau;

603-788

4.31e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.77 E-value: 4.31e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    603 TSSPSAPAAisstyTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSvPVAV 682
Cdd:PRK07003  362 VTGGGAPGG-----GVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPA-PPAT 435

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    683 SSTYTSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSStytSSPSAPAAISSTYTSSPSA 762
Cdd:PRK07003  436 ADRGDDAADGDAPVPAK-ANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEP---APRAAAPSAATPAAVPDAR 511

                         170       180
                  ....*....|....*....|....*.
gi 6320628    763 PVAVSSTYTSSPSALVVLSSTSTSSP 788
Cdd:PRK07003  512 APAAASREDAPAAAAPPAPEARPPTP 537

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

464-774

4.87e-06

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 51.84 E-value: 4.87e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     464 SSPSASVVVPSAYASSPSVPVAVSSTYTSSPS----APAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAP 539
Cdd:pfam05109  507 TSPTSAVTTPTPNATSPTPAVTTPTPNATSPTlgktSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTP 586

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     540 VAVSSTYTSSPSAPAAISSTYT--SSPSAPVaVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYT 617
Cdd:pfam05109  587 TPNATSPTVGETSPQANTTNHTlgGTSSTPV-VTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTS 665

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     618 SSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTyTSSPSAPAaiSSTYTSSPSVPVAVSSTYTSSPSAPAAIS 697
Cdd:pfam05109  666 HMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGT-TSQASGPG--NSSTSTKPGEVNVTKGTPPKNATSPQAPS 742

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628     698 STYTSSPSapVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSP 774
Cdd:pfam05109  743 GQKTAVPT--VTSTGGKANSTTGGKHTTGHGARTSTEPTTDYGGDSTTPRTRYNATTYLPPSTSSKLRPRWTFTSPP 817

PTZ00436

60S ribosomal protein L19-like protein; Provisional

485-625

4.95e-06

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 50.72 E-value: 4.95e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    485 AVSSTYTSSPSAP--AAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTS 562
Cdd:PTZ00436  210 APSGKKSAKAAAPakAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAA 289

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6320628    563 SPSAPVAVSSTYTSSPSAPVAISSTYTSSPsvPVAVSSTYTSSPSAPAAISSTYTSSPSAPVA 625
Cdd:PTZ00436  290 APPAKAAAAPAKAAAAPAKAAAAPAKAAAP--PAKAAAPPAKAATPPAKAAAPPAKAAAAPVG 350

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

618-740

5.02e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 5.02e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    618 SSPSAPVAVSSTYTS-SPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAI 696
Cdd:PRK14951  369 AAEAAAPAEKKTPARpEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 6320628    697 SSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 740
Cdd:PRK14951  449 PAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PHA03247

large tegument protein UL36; Provisional

442-882

5.44e-06

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.86 E-value: 5.44e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    442 APFPSAYIS---FSSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSstyTSSPSAPAAISSTYTSSPSAP------- 511
Cdd:PHA03247 2462 APFSLSLLLgelFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPP---APSRLAPAILPDEPVGEPVHPrmltwir 2538

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    512 ----VAVSSTYTSSPSAPAAISSTyTSSPSAPvavSSTYTSSPSAPAAISSTytSSPSAPvavssTYTSSPSAPVAisst 587
Cdd:PHA03247 2539 gleeLASDDAGDPPPPLPPAAPPA-APDRSVP---PPRPAPRPSEPAVTSRA--RRPDAP-----PQSARPRAPVD---- 2603

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    588 ytssPSVPVAVSSTYTSSPSAPAAISStytsSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAA 667
Cdd:PHA03247 2604 ----DRGDPRGPAPPSPLPPDTHAPDP----PPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQ 2675

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    668 ISSTYT--SSPSVPVAVSS-TYTSSPSAPAAisstyTSSPSAPVAVSSTYTssPSAPAAISSTYTSSPSAPVA-VSSTYT 743
Cdd:PHA03247 2676 ASSPPQrpRRRAARPTVGSlTSLADPPPPPP-----TPEPAPHALVSATPL--PPGPAAARQASPALPAAPAPpAVPAGP 2748

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    744 SSPSAPAAISS-TYTSSPSAPVAVSSTYTSSPSALVVLSSTSTSSPYDIVYSPSTFAAIssgytPSPSASVAMSSTSSSS 822
Cdd:PHA03247 2749 ATPGGPARPARpPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADP-----PAAVLAPAAALPPAAS 2823

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    823 PydivyslsssasrssiatyefspspSTSLPTSSTYTYFSSAYAFEFSSERYSTTSTIAP 882
Cdd:PHA03247 2824 P-------------------------AGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAP 2858

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

487-615

5.51e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 5.51e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    487 SSTYTSSPSAPAAISSTYTSSPSAPVAVSSTytSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSA 566
Cdd:PRK14951  367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQA--AAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 6320628    567 PVAVSSTYTSSPSAPVAISSTYTSSPSVPVAvsSTYTSSPSAPAAISST 615
Cdd:PRK14951  445 VALAPAPPAQAAPETVAIPVRVAPEPAVASA--APAPAAAPAAARLTPT 491

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

590-712

6.05e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 6.05e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    590 SSPSVPVAVSSTYTS-SPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAI 668
Cdd:PRK14951  369 AAEAAAPAEKKTPARpEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 6320628    669 SSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 712
Cdd:PRK14951  449 PAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

506-628

6.94e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.87 E-value: 6.94e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    506 SSPSAPVAVSSTYTS-SPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAI 584
Cdd:PRK14951  369 AAEAAAPAEKKTPARpEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 6320628    585 SSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 628
Cdd:PRK14951  449 PAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PTZ00436

60S ribosomal protein L19-like protein; Provisional

495-637

7.67e-06

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 50.33 E-value: 7.67e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    495 SAPAAISSTYTSSPsAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 574
Cdd:PTZ00436  209 AAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAK 287

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6320628    575 TSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPsaPAAISSTYTSSPSAPVAVSSTYTSSPSAP 637
Cdd:PTZ00436  288 AAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAP--PAKAAAPPAKAATPPAKAAAPPAKAAAAP 348

PTZ00436

60S ribosomal protein L19-like protein; Provisional

607-749

7.67e-06

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 50.33 E-value: 7.67e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    607 SAPAAISSTYTSSPsAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTY 686
Cdd:PTZ00436  209 AAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAK 287

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6320628    687 TSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPsaPAAISSTYTSSPSAPVAVSSTYTSSPSAP 749
Cdd:PTZ00436  288 AAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAP--PAKAAAPPAKAATPPAKAAAPPAKAAAAP 348

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

534-656

8.44e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.87 E-value: 8.44e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    534 SSPSAPVAVSSTYTS-SPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAI 612
Cdd:PRK14951  369 AAEAAAPAEKKTPARpEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 6320628    613 SSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSS 656
Cdd:PRK14951  449 PAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PTZ00436

60S ribosomal protein L19-like protein; Provisional

521-671

8.82e-06

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 49.95 E-value: 8.82e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    521 SPSAPAAISSTYTSSPSAPVAVSSTYTSSPsAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSS 600
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 6320628    601 TYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSP----SVPVAVSSTYTSSPSAPAAISST 671
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPpakaAAPPAKAATPPAKAAAPPAKAAA 346

PTZ00436

60S ribosomal protein L19-like protein; Provisional

465-629

9.05e-06

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 49.95 E-value: 9.05e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    465 SPSASVVVPSAYASSPSVPVAVSSTYTSSPsAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 544
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    545 TYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAvsstytsspsAPAAISSTYTSSPSAPV 624
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAA----------APPAKAATPPAKAAAPP 341


                  ....*
gi 6320628    625 AVSST 629
Cdd:PTZ00436  342 AKAAA 346

PTZ00436

60S ribosomal protein L19-like protein; Provisional

507-665

1.16e-05

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 49.56 E-value: 1.16e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    507 SPSAPVAVSSTYTSSPSAPAAISSTYTSSPsAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISS 586
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6320628    587 TYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPsaPAAISSTYTSSPSVPVAVSSTYTSSPSAP 665
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAP--PAKAAAPPAKAATPPAKAAAPPAKAAAAP 348

PTZ00436

60S ribosomal protein L19-like protein; Provisional

467-609

1.22e-05

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 49.56 E-value: 1.22e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    467 SASVVVPSAYASSPSvpvavsstYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 546
Cdd:PTZ00436  216 SAKAAAPAKAAAAPA--------KAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAK 287

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6320628    547 TSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPsvPVAVSSTYTSSPSAP 609
Cdd:PTZ00436  288 AAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATP--PAKAAAPPAKAAAAP 348

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

515-643

1.24e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.10 E-value: 1.24e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    515 SSTYTSSPSAPAAISSTYTSSPSAPVAVSSTytSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSP-S 593
Cdd:PRK14951  367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQA--AAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPaA 444

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 6320628    594 VPVAVSStytSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISST 643
Cdd:PRK14951  445 VALAPAP---PAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPT 491

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

453-572

1.55e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 49.71 E-value: 1.55e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    453 SVPVAVSSTYTS-SPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISST 531
Cdd:PRK14951  372 AAAPAEKKTPARpEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAP 451

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 6320628    532 YTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 572
Cdd:PRK14951  452 PAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PTZ00436

60S ribosomal protein L19-like protein; Provisional

549-709

2.02e-05

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 48.79 E-value: 2.02e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    549 SPSAPAAISSTYTSSPSAPVAVSSTYTSSPsAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 628
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    629 TYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPsaPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPV 708
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAA--PAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPV 349


                  .
gi 6320628    709 A 709
Cdd:PTZ00436  350 G 350

PTZ00436

60S ribosomal protein L19-like protein; Provisional

563-721

2.09e-05

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 48.79 E-value: 2.09e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    563 SPSAPVAVSSTYTSSPSAPVAISSTYTSSPSvPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISS 642
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAPA-KAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6320628    643 TYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPsaPAAISSTYTSSPSAPVAVSSTYTSSPSAP 721
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAP--PAKAAAPPAKAATPPAKAAAPPAKAAAAP 348

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

599-727

2.25e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 49.33 E-value: 2.25e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    599 SSTYTSSPSAPAAISSTYTSSPSAPVAVSSTytSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSP-S 677
Cdd:PRK14951  367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQA--AAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPaA 444

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 6320628    678 VPVAVSStytSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISST 727
Cdd:PRK14951  445 VALAPAP---PAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPT 491

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

562-684

2.31e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 49.33 E-value: 2.31e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    562 SSPSAPVAVSSTYTS-SPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAI 640
Cdd:PRK14951  369 AAEAAAPAEKKTPARpEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 6320628    641 SSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSS 684
Cdd:PRK14951  449 PAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PTZ00436

60S ribosomal protein L19-like protein; Provisional

619-776

2.32e-05

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 48.79 E-value: 2.32e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    619 SPSAPVAVSSTYTSSPSAPAAISSTYTSSPSvPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISS 698
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAPA-KAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6320628    699 TYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPsaPAAISSTYTSSPSAPVAVSSTYTSSPSA 776
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAP--PAKAAAPPAKAATPPAKAAAPPAKAAAA 347

PHA03307

transcriptional regulator ICP4; Provisional

349-634

2.34e-05

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.40 E-value: 2.34e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    349 DRPATSSTAETSSEASQGVSRESNTFAVSSISTTNFIVSSASDTVVSTSSTNTVPYSSV-HSTFVHATSSSTYISSSLYS 427
Cdd:PHA03307  150 ASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRrSSPISASASSPAPAPGRSAA 229

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    428 SPSLSASVSSHFGVAPfPSAYISFSSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSS 507
Cdd:PHA03307  230 DDAGASSSDSSSSESS-GCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPA 308

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    508 PSAPVAVSSTYTSSPSAPAAISstytSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISST 587
Cdd:PHA03307  309 PSSPRASSSSSSSRESSSSSTS----SSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGR 384

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 6320628    588 YTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSP 634
Cdd:PHA03307  385 PTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYP 431

PLN02217

probable pectinesterase/pectinesterase inhibitor

446-534

3.58e-05

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 48.55 E-value: 3.58e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    446 SAYISFSSVPVAVSSTYTSSPSASVVvpsayASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAP 525
Cdd:PLN02217  579 SSNTTFSSDSPSTVVAPSTSPPAGHL-----GSPPATPSKIVSPSTSPPASHLGSPSTTPSSPESSIKVASTETASPESS 653


                  ....*....
gi 6320628    526 AAISSTYTS 534
Cdd:PLN02217  654 IKVASTESS 662

PTZ00436

60S ribosomal protein L19-like protein; Provisional

535-693

3.89e-05

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 48.02 E-value: 3.89e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    535 SPSAPVAVSSTYTSSPSAPAAISSTYTSSPsAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISS 614
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6320628    615 TYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPsaPAAISSTYTSSPSVPVAVSSTYTSSPSAP 693
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAP--PAKAAAPPAKAATPPAKAAAPPAKAAAAP 348

PTZ00436

60S ribosomal protein L19-like protein; Provisional

452-597

4.43e-05

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 47.64 E-value: 4.43e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    452 SSVPVAVSSTYTSSPSASVVVPSAYASSPSvPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISST 531
Cdd:PTZ00436  208 AAAPSGKKSAKAAAPAKAAAAPAKAAAPPA-KAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPA 286

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6320628    532 YTSSPSAPVAVSSTYTSSPsaPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVA 597
Cdd:PTZ00436  287 KAAAPPAKAAAAPAKAAAA--PAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPVG 350

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

543-671

4.60e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 4.60e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    543 SSTYTSSPSAPAAISSTYTSSPSAPVAVSSTytSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSA 622
Cdd:PRK14951  367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQA--AAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 6320628    623 PVAVSSTYTSSPSAPAAISSTYTSSPSVPVAvsSTYTSSPSAPAAISST 671
Cdd:PRK14951  445 VALAPAPPAQAAPETVAIPVRVAPEPAVASA--APAPAAAPAAARLTPT 491

PLN02217

probable pectinesterase/pectinesterase inhibitor

676-776

4.82e-05

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 48.16 E-value: 4.82e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    676 PSVPVAVSSTYTSSPSAP--AAISSTYTSSPSAPVAVSSTYTSSPSapaaisSTYTSSPSAPVAVSSTYTSSPSAPAAIS 753
Cdd:PLN02217  556 PYIPGLFAGNPGSTNSTPtgSAASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSP 629

                          90       100
                  ....*....|....*....|...
gi 6320628    754 STYTSSPSAPVAVSSTYTSSPSA 776
Cdd:PLN02217  630 STTPSSPESSIKVASTETASPES 652

PPE

PPE-repeat protein [Function unknown];

526-768

5.00e-05

PPE-repeat protein [Function unknown];

Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 47.58 E-value: 5.00e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   526 AAISSTYTSSPSApvAVSSTytssPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSS 605
Cdd:COG5651  148 AAAMYGYAAASAA--AVALT----PFTQPPPTITNPGGLLGAQNAGSGNTSSNPGFANLGLTGLNQVGIGGLNSGSGPIG 221

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   606 PSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPV-AVSS 684
Cdd:COG5651  222 LNSGPGNTGFAGTGAAAGAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAgGGAG 301

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   685 TYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPV 764
Cdd:COG5651  302 AAAATGLGLGAGGAAGAAGATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGG 381


                 ....
gi 6320628   765 AVSS 768
Cdd:COG5651  382 GAAA 385

FimV

COG3170

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

473-721

7.28e-05

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 47.48 E-value: 7.28e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   473 PSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPsAPVAVSSTYTSSP----SAPAAISSTYTSSPSAPVAVSSTYTS 548
Cdd:COG3170  106 PPAYAAAAAAPAAAPAPAPAAPAAAAAAADQPAAEA-APAASGEYYPVRPgdtlWSIAARPVRPSSGVSLDQMMVALYRA 184

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   549 SPSAPAAI------SSTYTSSPSAPVAVSstyTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSA 622
Cdd:COG3170  185 NPDAFIDGninrlkAGAVLRVPAAEEVAA---LSPAEARQEVQAQSADWAAYRARLAAAVEPAPAAAAPAAPPAAAAAAG 261

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   623 PVAVSSTYTSSPSAPAAISS-TYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAvsstytsSPSAPAAISSTYT 701
Cdd:COG3170  262 PVPAAAEDTLSPEVTAAAAAeEADALPEAAAELAERLAALEAQLAELQRLLALKNPAPAA-------AVSAPAAAAAAAT 334

                        250       260
                 ....*....|....*....|
gi 6320628   702 SSPSAPVAVSSTYTSSPSAP 721
Cdd:COG3170  335 VEAAAPAAAAQPAAAAPAPA 354

PRK10856

cytoskeleton protein RodZ;

491-582

7.44e-05

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.94 E-value: 7.44e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    491 TSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPSAPVAV 570
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGA-APLPTDQAGV 244

                          90
                  ....*....|..
gi 6320628    571 SSTyTSSPSAPV 582
Cdd:PRK10856  245 STP-AADPNALV 255

PPE

PPE-repeat protein [Function unknown];

498-740

8.87e-05

PPE-repeat protein [Function unknown];

Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 46.81 E-value: 8.87e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   498 AAISSTYTSSPSApvAVSSTytssPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSS 577
Cdd:COG5651  148 AAAMYGYAAASAA--AVALT----PFTQPPPTITNPGGLLGAQNAGSGNTSSNPGFANLGLTGLNQVGIGGLNSGSGPIG 221

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   578 PSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPV-AVSS 656
Cdd:COG5651  222 LNSGPGNTGFAGTGAAAGAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAgGGAG 301

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   657 TYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPV 736
Cdd:COG5651  302 AAAATGLGLGAGGAAGAAGATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGG 381


                 ....
gi 6320628   737 AVSS 740
Cdd:COG5651  382 GAAA 385

PPE

PPE-repeat protein [Function unknown];

456-684

8.95e-05

PPE-repeat protein [Function unknown];

Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 46.81 E-value: 8.95e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   456 VAVSSTYTSSPSASVVVPSAYASSPsvpvAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSS 535
Cdd:COG5651  160 AAVALTPFTQPPPTITNPGGLLGAQ----NAGSGNTSSNPGFANLGLTGLNQVGIGGLNSGSGPIGLNSGPGNTGFAGTG 235

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   536 PSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPV-AVSSTYTSSPSAPAAISS 614
Cdd:COG5651  236 AAAGAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAgGGAGAAAATGLGLGAGGA 315

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   615 TYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSS 684
Cdd:COG5651  316 AGAAGATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGAAA 385

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

445-582

1.10e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.02 E-value: 1.10e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    445 PSAYISFSSV--------PVAVSSTYTSSPSASVVVPSAYASSPSvPVAVSSTYT-SSPSAPAAisstyTSSPSAPVAVS 515
Cdd:PRK14951  348 PDEYAALTMVllrllafkPAAAAEAAAPAEKKTPARPEAAAPAAA-PVAQAAAAPaPAAAPAAA-----ASAPAAPPAAA 421

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628    516 STYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPV 582
Cdd:PRK14951  422 PPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARL 488

PRK10856

cytoskeleton protein RodZ;

687-776

1.11e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.56 E-value: 1.11e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    687 TSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPSAPVAV 766
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGA-APLPTDQAGV 244

                          90
                  ....*....|
gi 6320628    767 SSTyTSSPSA 776
Cdd:PRK10856  245 STP-AADPNA 253

PRK07994

DNA polymerase III subunits gamma and tau; Validated

466-629

1.20e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.78 E-value: 1.20e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    466 PSASVVVPSA-YASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 544
Cdd:PRK07994  361 PAAPLPEPEVpPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    545 tytSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSAPVAiSSTYTSSPSVPVAVSSTYTSSPSAP-AAISSTYTSSPSAP 623
Cdd:PRK07994  441 ---SEPAAASRARPV-NSALERLASVRPAPSALEKAPAK-KEAYRWKATNPVEVKKEPVATPKALkKALEHEKTPELAAK 515


                  ....*.
gi 6320628    624 VAVSST 629
Cdd:PRK07994  516 LAAEAI 521

PRK07003

DNA polymerase III subunit gamma/tau;

631-817

1.26e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 1.26e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    631 TSSPSAPAAisstyTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAvsstytsSPSAPAAISSTYTSSPSAPVAV 710
Cdd:PRK07003  362 VTGGGAPGG-----GVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAG-------AALAPKAAAAAAATRAEAPPAA 429

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    711 SSTYTSSPSA--PAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSALVVLSSTSTSSP 788
Cdd:PRK07003  430 PAPPATADRGddAADGDAPVPAKANARASADSRCDERDAQPPADSGS-ASAPASDAPPDAAFEPAPRAAAPSAATPAAVP 508

                         170       180
                  ....*....|....*....|....*....
gi 6320628    789 ydivySPSTFAAISSGYTPSPSASVAMSS 817
Cdd:PRK07003  509 -----DARAPAAASREDAPAAAAPPAPEA 532

KREPA2

cd23959

Kinetoplastid RNA Editing Protein A2 (KREPA2); The KREPA2 (TbMP63) protein is a component of ...

621-772

1.46e-04

Pssm-ID: 467780 [Multi-domain] Cd Length: 424 Bit Score: 46.40 E-value: 1.46e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   621 SAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPvavSSTYTSSPSAPAAISSTY 700
Cdd:cd23959   96 SDAFAMAPDESLGPFRAARVPNPFSASSSTQRETHKTAQVAPPKAEPQTAPVTPFGQLP---MFGQHPPPAKPLPAAAAA 172

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6320628   701 TSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 772
Cdd:cd23959  173 QQSSASPGEVASPFASGTVSASPFATATDTAPSSGAPDGFPAEASAPSPFAAPASAASFPAAPVANGEAATP 244

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

655-765

1.48e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.63 E-value: 1.48e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    655 SSTYTSSPSAPAAISSTYTSSPSVPVAVSSTytSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSA 734
Cdd:PRK14951  367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQA--AAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110
                  ....*....|....*....|....*....|.
gi 6320628    735 PVAVSSTYTSSPSAPAAISSTYTSSPSAPVA 765
Cdd:PRK14951  445 VALAPAPPAQAAPETVAIPVRVAPEPAVASA 475

DUF5585

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

353-719

1.52e-04

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 46.49 E-value: 1.52e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     353 TSSTAETSSEASQGVSRESNTFAVSSISTTNFIVSSASDTVVSTSSTNTVPYSSVHSTFVHATSSSTYISSSLYSSPSLS 432
Cdd:pfam17823   87 TAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAAS 166

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     433 ASVsshfgvAPFPSAYISFSSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPV 512
Cdd:pfam17823  167 APH------AASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGT 240

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     513 AVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSP 592
Cdd:pfam17823  241 VTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTA 320

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     593 SVPVAVSSTYTSSPSAPAAISSTytssPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPvAVSSTYTSSPSAPaaisSTY 672
Cdd:pfam17823  321 GEPTPSPSNTTLEPNTPKSVAST----NLAVVTTTKAQAKEPSASPVPVLHTSMIPEVE-ATSPTTQPSPLLP----TQG 391

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*..
gi 6320628     673 TSSPSVPVAVSSTYTSspSAPAAISSTYTSSPSAPVAVSSTYTSSPS 719
Cdd:pfam17823  392 AAGPGILLAPEQVATE--ATAGTASAGPTPRSSGDPKTLAMASCQLS 436

PRK07764

DNA polymerase III subunits gamma and tau; Validated

455-764

1.73e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.52 E-value: 1.73e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    455 PVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTS 534
Cdd:PRK07764  401 AAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAP 480

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    535 SPSAPVAVSSTYTSSPSAPAAISS----------------------------------------------TYTSSPSA-- 566
Cdd:PRK07764  481 APAPPAAPAPAAAPAAPAAPAAPAgaddaatlrerwpeilaavpkrsrktwaillpeatvlgvrgdtlvlGFSTGGLArr 560

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    567 -----------------------PVAVSSTYTSSPSAPVAISSTYTSSP---SVPVAVSSTYTSSPSAPAAISSTytsSP 620
Cdd:PRK07764  561 faspgnaevlvtalaeelggdwqVEAVVGPAPGAAGGEGPPAPASSGPPeeaARPAAPAAPAAPAAPAPAGAAAA---PA 637

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    621 SAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTytssPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTY 700
Cdd:PRK07764  638 EASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAG----GAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ 713

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6320628    701 TSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPV 764
Cdd:PRK07764  714 ADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPS 777

PRK07994

DNA polymerase III subunits gamma and tau; Validated

564-741

1.82e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.40 E-value: 1.82e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    564 PSAPVAvsstytsSPSAPVAisstytSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISST 643
Cdd:PRK07994  361 PAAPLP-------EPEVPPQ------SAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQ 427

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    644 YTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAaisstYTSSPSAPVAVSSTYTSSPSAP-A 722
Cdd:PRK07994  428 QLQRAQGATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEA-----YRWKATNPVEVKKEPVATPKALkK 502

                         170
                  ....*....|....*....
gi 6320628    723 AISSTYTSSPSAPVAVSST 741
Cdd:PRK07994  503 ALEHEKTPELAAKLAAEAI 521

PRK10856

cytoskeleton protein RodZ;

659-748

1.93e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 45.79 E-value: 1.93e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    659 TSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPSAPVAV 738
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGA-APLPTDQAGV 244

                          90
                  ....*....|
gi 6320628    739 SSTyTSSPSA 748
Cdd:PRK10856  245 STP-AADPNA 253

PLN02217

probable pectinesterase/pectinesterase inhibitor

693-802

2.24e-04

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 46.24 E-value: 2.24e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    693 PAAISSTYTSSpsapvAVSSTYTSSPSAPAAISSTYTSSPSapvavsSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 772
Cdd:PLN02217  566 PGSTNSTPTGS-----AASSNTTFSSDSPSTVVAPSTSPPA------GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPS 634

                          90       100       110
                  ....*....|....*....|....*....|
gi 6320628    773 SPSALVVLSSTSTSSPYDIVYSPSTFAAIS 802
Cdd:PLN02217  635 SPESSIKVASTETASPESSIKVASTESSVS 664

PRK07764

DNA polymerase III subunits gamma and tau; Validated

468-776

2.26e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.13 E-value: 2.26e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    468 ASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTytSSPSAPVAVSSTYTSSPSAPAAisstytsspsAPVAVSSTYT 547
Cdd:PRK07764  360 ARMLLPSASDDERGLLARLERLERRLGVAGGAGAPA--AAAPSAAAAAPAAAPAPAAAAP----------AAAAAPAPAA 427

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    548 SSPSAPAAisstytsspsAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 627
Cdd:PRK07764  428 APQPAPAP----------APAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAP 497

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    628 STYTSSPSAPAAIS---------------STYTSSPSVPVA---------VSSTYTSSPSA------------------- 664
Cdd:PRK07764  498 AAPAAPAGADDAATlrerwpeilaavpkrSRKTWAILLPEAtvlgvrgdtLVLGFSTGGLArrfaspgnaevlvtalaee 577

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    665 ------------PAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSP 732
Cdd:PRK07764  578 lggdwqveavvgPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHV 657

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 6320628    733 SAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSA 776
Cdd:PRK07764  658 AVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQP 701

CLEC16A_C

CLEC16A C-terminal; This is the C-terminal domain of C-type lectin domain family 16, member A ...

466-594

2.79e-04

CLEC16A C-terminal; This is the C-terminal domain of C-type lectin domain family 16, member A (CLEC16A, the Drosophila orthologue Ema and GOP-1 in C. elegans), an evolutionarily conserved endosomal membrane protein required for trafficking of fluid-phase and receptor-mediated endocytic cargos. It is required for mitophagy, autophagy and endosome maturation. This protein has been identified as a susceptibility gene for autoimmune diseases like type 1 diabetes, multiple sclerosis and adrenal dysfunction. This domain is also present in GFS9/TT9 (TRANSPARENT TESTA 9) a protein from Arabidopsis required for vacuolar development through membrane fusion at vacuoles and for membrane trafficking machinery and accumulation of flavonoids in the seed coat.

Pssm-ID: 466083 Cd Length: 762 Bit Score: 46.03 E-value: 2.79e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     466 PSASVVVPSAYASSPSVP---VAV-----SSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPS 537
Cdd:pfam19439  613 PSDPTVQRSVFASVDKVPgfaVAQcinqhSPSPLSSPSPPSSSSGSGSTGRCDSVTASSTSTPSPSDDGSTPEQ-PQLPD 691

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 6320628     538 APVAVSSTytsspSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVA-ISSTYTSSPSV 594
Cdd:pfam19439  692 ELAFLDST-----PAVSKPGKSSASSETEPAALAPSLTPAPQPTISlLSDDSTDALSV 744

CLEC16A_C

CLEC16A C-terminal; This is the C-terminal domain of C-type lectin domain family 16, member A ...

578-726

3.14e-04

Pssm-ID: 466083 Cd Length: 762 Bit Score: 45.65 E-value: 3.14e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     578 PSAPVAISSTYTSSPSVP---VAV-----SSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPS 649
Cdd:pfam19439  613 PSDPTVQRSVFASVDKVPgfaVAQcinqhSPSPLSSPSPPSSSSGSGSTGRCDSVTASSTSTPSPSDDGSTPEQ-PQLPD 691

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628     650 VPVAVSSTytsspSAPAAISSTYTSSPSVPVAVSSTYTsspSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISS 726
Cdd:pfam19439  692 ELAFLDST-----PAVSKPGKSSASSETEPAALAPSLT---PAPQPTISLLSDDSTDALSVESLTLLPPADSPHLRS 760

CLEC16A_C

CLEC16A C-terminal; This is the C-terminal domain of C-type lectin domain family 16, member A ...

662-774

3.17e-04

Pssm-ID: 466083 Cd Length: 762 Bit Score: 45.65 E-value: 3.17e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     662 PSAPAAISSTYTSSPSVP---VAV-----SSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPS 733
Cdd:pfam19439  613 PSDPTVQRSVFASVDKVPgfaVAQcinqhSPSPLSSPSPPSSSSGSGSTGRCDSVTASSTSTPSPSDDGSTPEQ-PQLPD 691

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 6320628     734 APVAVSSTytsspSAPAAISSTYTSSPSAPVAVSSTYTSSP 774
Cdd:pfam19439  692 ELAFLDST-----PAVSKPGKSSASSETEPAALAPSLTPAP 727

PTZ00436

60S ribosomal protein L19-like protein; Provisional

474-641

3.17e-04

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 44.94 E-value: 3.17e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    474 SAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytssPSAPVAVSSTYTSSPSAP 553
Cdd:PTZ00436  195 AAAAAKQKAAAKKAAAPSGKKSAKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAA--------APAKAAAPPAKAAAPPAK 266

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    554 AAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAisstytsSPSAPVAVSSTYTSS 633
Cdd:PTZ00436  267 AAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAA-------APPAKAATPPAKAAA 339


                  ....*...
gi 6320628    634 PSAPAAIS 641
Cdd:PTZ00436  340 PPAKAAAA 347

PRK10856

cytoskeleton protein RodZ;

631-720

3.57e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 44.63 E-value: 3.57e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    631 TSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTyTSSPSAPVAV 710
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGA-APLPTDQAGV 244

                          90
                  ....*....|
gi 6320628    711 SSTyTSSPSA 720
Cdd:PRK10856  245 STP-AADPNA 253

PPE

PPE-repeat protein [Function unknown];

474-712

3.61e-04

PPE-repeat protein [Function unknown];

Pssm-ID: 444372 [Multi-domain] Cd Length: 385 Bit Score: 44.88 E-value: 3.61e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   474 SAYASSPSVpvAVSSTytssPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAP 553
Cdd:COG5651  152 YGYAAASAA--AVALT----PFTQPPPTITNPGGLLGAQNAGSGNTSSNPGFANLGLTGLNQVGIGGLNSGSGPIGLNSG 225

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   554 AAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYT-SSPSAPVAVSSTYTS 632
Cdd:COG5651  226 PGNTGFAGTGAAAGAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAgSPLGLAGGGAGAAAA 305

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   633 SPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 712
Cdd:COG5651  306 TGLGLGAGGAAGAAGATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGAAA 385

PRK10263

DNA translocase FtsK; Provisional

492-749

3.89e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.46 E-value: 3.89e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    492 SSPSAPAAISSTYTSSPSAPVavsSTYTSSPSAPAAisstyTSSPSAPVA----VSSTYTSSPS-APAAISSTYTSSPSA 566
Cdd:PRK10263  317 TEPVAVAAAATTATQSWAAPV---EPVTQTPPVASV-----DVPPAQPTVawqpVPGPQTGEPViAPAPEGYPQQSQYAQ 388

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    567 PVAVSSTYTSSPSAPvaiSSTYTSSPSVPVAVSSTYTSSPSAPAAISStYTSSPSAPVAVSSTYTSSPSAPAAISSTYTS 646
Cdd:PRK10263  389 PAVQYNEPLQQPVQP---QQPYYAPAAEQPAQQPYYAPAPEQPAQQPY-YAPAPEQPVAGNAWQAEEQQSTFAPQSTYQT 464

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    647 SPSV--PVAVSSTYTSSPSAP--------AAISSTYTSSP------------------------SVPVAVSSTYTSSPSA 692
Cdd:PRK10263  465 EQTYqqPAAQEPLYQQPQPVEqqpvvepePVVEETKPARPplyyfeeveekrarereqlaawyqPIPEPVKEPEPIKSSL 544

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628    693 PAaisstyTSSPSAPvAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAP 749
Cdd:PRK10263  545 KA------PSVAAVP-PVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGP 594

DUF5585

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

311-705

4.29e-04

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 44.95 E-value: 4.29e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     311 PSSITQTTSIDSFSMSEVELSTYYDLSAGNYPDQELIVDRPATSSTAETSSEASQGVSRESNTFAVSSISTTNFIVSSAS 390
Cdd:pfam17823   69 PVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAA 148

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     391 DTVVSTSSTNTVPYSSVHSTFVHATSSSTYISSSLYSSPSLSASVSSHFGVAPFPSAYISFSsvPVAVSSTYTSSPSASV 470
Cdd:pfam17823  149 ACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPAR--GISTAATATGHPAAGT 226

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     471 VVPSAYASSPsvpVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPsapaaISSTYTSSPSAPVAVSSTYTSSP 550
Cdd:pfam17823  227 ALAAVGNSSP---AAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDP-----HARRLSPAKHMPSDTMARNPAAP 298

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     551 SAPAAISSTYTSSPSAPV-AVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSST 629
Cdd:pfam17823  299 MGAQAQGPIIQVSTDQPVhNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMIPEVEATS 378

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6320628     630 YTSSPSapAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPS 705
Cdd:pfam17823  379 PTTQPS--PLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPKTLAMASCQLSTQGQYLVVTTDPLTPA 452

PRK12727

flagellar biosynthesis protein FlhF;

477-677

4.65e-04

flagellar biosynthesis protein FlhF;

Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 44.98 E-value: 4.65e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    477 ASSPSVPVAVSstyTSSPS-APAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSStytsspSAPAA 555
Cdd:PRK12727   57 TARSDTPATAA---APAPApQAPTKPAAPVHAPLKLSANANMSQRQRVASAAEDMIAAMALRQPVSVPR------QAPAA 127

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    556 ISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTytssPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPS 635
Cdd:PRK12727  128 APVRAASIPSPAAQALAHAAAVRTAPRQEHAL----SAVPEQLFADFLTTAPVPRAPVQAPVVAAPAPVPAIAAALAAHA 203

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 6320628    636 APA------AISSTYTSSPSVPVAVSS----TYTSSPSAPAAISSTYTSSPS 677
Cdd:PRK12727  204 AYAqdddeqLDDDGFDLDDALPQILPPaalpPIVVAPAAPAALAAVAAAAPA 255

PRK10856

cytoskeleton protein RodZ;

547-636

4.80e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 44.25 E-value: 4.80e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    547 TSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTyTSSPSAPVAV 626
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGA-APLPTDQAGV 244

                          90
                  ....*....|
gi 6320628    627 SSTyTSSPSA 636
Cdd:PRK10856  245 STP-AADPNA 253

PRK10856

cytoskeleton protein RodZ;

519-608

5.02e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 44.25 E-value: 5.02e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    519 TSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPsAPVAISSTYTSSPSVPVAV 598
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAP-AAPATPDGAAPLPTDQAGV 244

                          90
                  ....*....|
gi 6320628    599 SSTyTSSPSA 608
Cdd:PRK10856  245 STP-AADPNA 253

PRK10856

cytoskeleton protein RodZ;

603-692

5.02e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 44.25 E-value: 5.02e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    603 TSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTyTSSPSVPVAV 682
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGA-APLPTDQAGV 244

                          90
                  ....*....|
gi 6320628    683 SSTyTSSPSA 692
Cdd:PRK10856  245 STP-AADPNA 253

PHA03307

transcriptional regulator ICP4; Provisional

520-852

5.11e-04

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 5.11e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    520 SSPSAPAAISSTytssPSAPVAVSSTYTSSPSAPAAisstytSSPSAPVAVSSTYTSSPSAPVaiSSTYTSSPSVPVAVS 599
Cdd:PHA03307   20 FFPRPPATPGDA----ADDLLSGSQGQLVSDSAELA------AVTVVAGAAACDRFEPPTGPP--PGPGTEAPANESRST 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    600 STYTSSPSAPAAISSTYTSSPSAPvavsstytSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVP 679
Cdd:PHA03307   88 PTWSLSTLAPASPAREGSPTPPGP--------SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASP 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    680 VAVSSTYTSSPSAPAAISSTYTSSPsAPVAVSSTYTSSPSAPAAisstyTSSPSAPVAVSSTYTSSPSAPAAISSTYTSS 759
Cdd:PHA03307  160 AAVASDAASSRQAALPLSSPEETAR-APSSPPAEPPPSTPPAAA-----SPRPPRRSSPISASASSPAPAPGRSAADDAG 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    760 PSAPVAVSSTYTSSPSALVVLSSTSTSSPYDIVYSPSTFA-AISSGYTPSPSASVAMSSTSSSSPYDIVYSLSSSASRSS 838
Cdd:PHA03307  234 ASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASgWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPR 313

                         330
                  ....*....|....
gi 6320628    839 IATYEfspSPSTSL 852
Cdd:PHA03307  314 ASSSS---SSSRES 324

PRK07994

DNA polymerase III subunits gamma and tau; Validated

475-657

5.44e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.86 E-value: 5.44e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    475 AYASSPSVPVAvsstytsSPSAPAAisstytSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPA 554
Cdd:PRK07994  356 MLAFHPAAPLP-------EPEVPPQ------SAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQL 422

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    555 AISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAaisstYTSSPSAPVAVSSTYTSSP 634
Cdd:PRK07994  423 LAARQQLQRAQGATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEA-----YRWKATNPVEVKKEPVATP 497

                         170       180
                  ....*....|....*....|....
gi 6320628    635 SAP-AAISSTYTSSPSVPVAVSST 657
Cdd:PRK07994  498 KALkKALEHEKTPELAAKLAAEAI 521

PRK07764

DNA polymerase III subunits gamma and tau; Validated

494-695

5.54e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 5.54e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    494 PSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSST 573
Cdd:PRK07764  598 EGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAA 677

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    574 YTSSPSAPvaisstyTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVA 653
Cdd:PRK07764  678 PAAPPPAP-------APAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPD 750

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 6320628    654 VSSTYTSSPSAPAAisstytSSPSVPVAVSSTYTSSPSAPAA 695
Cdd:PRK07764  751 PAGAPAQPPPPPAP------APAAAPAAAPPPSPPSEEEEMA 786

PRK07764

DNA polymerase III subunits gamma and tau; Validated

522-723

5.78e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 5.78e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    522 PSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSST 601
Cdd:PRK07764  598 EGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAA 677

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    602 YTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytSSPSVPVAVSSTYtSSPSAPAAISSTYTSSPSVPVA 681
Cdd:PRK07764  678 PAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQAD------DPAAQPPQAAQGA-SAPSPAADDPVPLPPEPDDPPD 750

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 6320628    682 VSSTYTSSPSAPAAisstytSSPSAPVAVSSTYTSSPSAPAA 723
Cdd:PRK07764  751 PAGAPAQPPPPPAP------APAAAPAAAPPPSPPSEEEEMA 786

PLN02217

probable pectinesterase/pectinesterase inhibitor

445-520

6.77e-04

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 44.69 E-value: 6.77e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6320628    445 PSAYISFSSVPVAvsSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTS 520
Cdd:PLN02217  589 PSTVVAPSTSPPA--GHLGSPPATPSKIVSPSTSPPASHLGSPSTTPSSPESSIKVASTETASPESSIKVASTESS 662

PTZ00436

60S ribosomal protein L19-like protein; Provisional

633-795

7.05e-04

60S ribosomal protein L19-like protein; Provisional

Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 44.17 E-value: 7.05e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    633 SPSAPAAISSTYTSSPSVPVAVSSTYTSSPsAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSS 712
Cdd:PTZ00436  193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAP-AKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPP 271

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    713 TYTSSPSAPAAISSTYTSSPSAPVAvsstytSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSALVVLSSTSTSSPYDIV 792
Cdd:PTZ00436  272 AKAAAPPAKAAAPPAKAAAPPAKAA------AAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAA 345


                  ...
gi 6320628    793 YSP 795
Cdd:PTZ00436  346 AAP 348

CLEC16A_C

CLEC16A C-terminal; This is the C-terminal domain of C-type lectin domain family 16, member A ...

634-746

8.40e-04

Pssm-ID: 466083 Cd Length: 762 Bit Score: 44.11 E-value: 8.40e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     634 PSAPAAISSTYTSSPSVP---VAV-----SSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTyTSSPS 705
Cdd:pfam19439  613 PSDPTVQRSVFASVDKVPgfaVAQcinqhSPSPLSSPSPPSSSSGSGSTGRCDSVTASSTSTPSPSDDGSTPEQ-PQLPD 691

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 6320628     706 APVAVSSTytsspSAPAAISSTYTSSPSAPVAVSSTYTSSP 746
Cdd:pfam19439  692 ELAFLDST-----PAVSKPGKSSASSETEPAALAPSLTPAP 727

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

647-883

9.51e-04

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 43.97 E-value: 9.51e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   647 SPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSapvavSSTYTSSPSAPAAISS 726
Cdd:COG3469    1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGS-----GTGTTAASSTAATSST 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   727 TYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSALVVLSSTSTSSPYDIVYSPSTFAAISSGYT 806
Cdd:COG3469   76 TSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSG 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628   807 PSPSASVAMSSTSSSSPYdivyslsssasrssiatyefspspstslptSSTYTYFSSAYAFEFSSERYSTTSTIAPT 883
Cdd:COG3469  156 TETATGGTTTTSTTTTTT------------------------------SASTTPSATTTATATTASGATTPSATTTA 202

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

467-666

1.08e-03

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 43.76 E-value: 1.08e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    467 SASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAIS----STYTS-----SPSAPVAVSSTyTSSPSAPaaiSSTYTSSPS 537
Cdd:PLN03209  333 SDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVprplSPYTAyedlkPPTSPIPTPPS-SSPASSK---SVDAVAKPA 408

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    538 APVAVSSTYTSS--PSAPAAISSTYTSSPSAPVAVSSTY----TSSPSAPVAISSTYTSSPSVPvAVSSTYTSSPSAPAA 611
Cdd:PLN03209  409 EPDVVPSPGSASnvPEVEPAQVEAKKTRPLSPYARYEDLkpptSPSPTAPTGVSPSVSSTSSVP-AVPDTAPATAATDAA 487

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 6320628    612 ISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPA 666
Cdd:PLN03209  488 APPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALA 542

KREPA2

cd23959

Kinetoplastid RNA Editing Protein A2 (KREPA2); The KREPA2 (TbMP63) protein is a component of ...

469-686

1.15e-03

Pssm-ID: 467780 [Multi-domain] Cd Length: 424 Bit Score: 43.32 E-value: 1.15e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   469 SVVVPSAYASSPSVPVAVSSTYTSS---PSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSST 545
Cdd:cd23959   39 SSMVMKVFAARPSDQEEPLYGAVSPegeNPFDGPGLVTASTVSDCYVGNANFYEVDMSDAFAMAPDESLGPFRAARVPNP 118

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   546 YTSSpsAPAAISSTYTSSPSAPVAVSSTytsspsAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVA 625
Cdd:cd23959  119 FSAS--SSTQRETHKTAQVAPPKAEPQT------APVTPFGQLPMFGQHPPPAKPLPAAAAAQQSSASPGEVASPFASGT 190

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6320628   626 VSstyTSSPSAPAAISSTYTSSPSVPVAVSStyTSSPSAPAAISSTYTSSPSVPVAVSSTY 686
Cdd:cd23959  191 VS---ASPFATATDTAPSSGAPDGFPAEASA--PSPFAAPASAASFPAAPVANGEAATPTH 246

COG4935

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ...

374-928

1.41e-03

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];

Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 43.66 E-value: 1.41e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   374 FAVSSISTTNFIVSSASDTVVSTSSTNTVPYSSVHSTFVHATSSSTYISSSLYSSPSLSASVSSHFGVAPFPSAYISFSS 453
Cdd:COG4935    5 GAGSTTGLAAAVLAAAAGTGSAATAEGGAASTATSAAVAGASAAAAAATAVGAGASSLAASAAAAAAAASGAAAGAVDAA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   454 VPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYT 533
Cdd:COG4935   85 PAAATVVGAALGVVAVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVAAVAG 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   534 SSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAIS 613
Cdd:COG4935  165 AAGGGGGVGVAAAVGVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAAAAGV 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   614 STYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSP--- 690
Cdd:COG4935  245 GGLGAAATAAAADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGggs 324

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   691 -SAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSST 769
Cdd:COG4935  325 aAAAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASA 404

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628   770 YTSSPSALVVLSSTSTSSPYDIVYSPSTFAAISSGYTPSPSASVAMSSTSSSSPYDIVYSLSSSASRSSIATYEFSPSPS 849
Cdd:COG4935  405 AGAVGAGTAAGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSTTAAAA 484

                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6320628   850 TSLPTSSTYTYFSSAYAFEFSSERYSTTSTiAPTQIHSTLSRITDFLLQTSMAIQSIVSQQISTSSTLNDEIHSSALSV 928
Cdd:COG4935  485 AAAAGLATTAAVAAGAAGAAAAAATAASVG-GATGAAGTTNSTATFSNTTDVAIPDNGPAGVTSTITVSGGGAVEDVTV 562

kgd

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

493-599

1.51e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.73 E-value: 1.51e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    493 SPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytSSPSAPVAVSS 572
Cdd:PRK12270   40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAA------AAAAAPAAAAV 113

                          90       100
                  ....*....|....*....|....*....
gi 6320628    573 TYTSSP--SAPVAISSTYTSSPSVPVAVS 599
Cdd:PRK12270  114 EDEVTPlrGAAAAVAKNMDASLEVPTATS 142

PRK10856

cytoskeleton protein RodZ;

673-764

2.14e-03

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 42.32 E-value: 2.14e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    673 TSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPsAPVAVSSTYTSSPSAPAAI 752
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAP-AAPATPDGAAPLPTDQAGV 244

                          90
                  ....*....|..
gi 6320628    753 SSTyTSSPSAPV 764
Cdd:PRK10856  245 STP-AADPNALV 255

rne

PRK10811

ribonuclease E; Reviewed

468-650

2.48e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.72 E-value: 2.48e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    468 ASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTytsSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSstyT 547
Cdd:PRK10811  869 VVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEP---QPEEVVVVETTHPEVIAAPVTEQPQVITESDVAVAQE---V 942

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    548 SSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAvssTYTSSPSAPAAisstytsSPSAPVAVS 627
Cdd:PRK10811  943 AEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVE---TVTAVEPEVAP-------AQVPEATVE 1012

                         170       180
                  ....*....|....*....|....*
gi 6320628    628 STYTSSP--SAPAaisSTYTSSPSV 650
Cdd:PRK10811 1013 HNHATAPmtRAPA---PEYVPEAPR 1034

kgd

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

549-655

2.59e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.96 E-value: 2.59e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    549 SPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAisstytSSPSAPVAVSS 628
Cdd:PRK12270   40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAA------AAAAAPAAAAV 113

                          90       100
                  ....*....|....*....|....*....
gi 6320628    629 TYTSSP--SAPAAISSTYTSSPSVPVAVS 655
Cdd:PRK12270  114 EDEVTPlrGAAAAVAKNMDASLEVPTATS 142

rad23

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

495-667

2.60e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.19 E-value: 2.60e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     495 SAPAAISSTYTSSPSAPvavSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 574
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATP---TSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAASTLV 151

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     575 TSSP--SAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSspsaPAAISSTYTSSPSVPV 652
Cdd:TIGR00601  152 VGSEreTTIEEIMEMGYEREEVERALRAAFNNPDRAVEYLLTGIPEDPEQPEPVQQTAAS----TAAATTETPQHGSVFE 227

                          170
                   ....*....|....*
gi 6320628     653 AVSSTYTSSPSAPAA 667
Cdd:TIGR00601  228 QAAQGGTEQPATEAA 242

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

702-795

2.78e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.39 E-value: 2.78e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    702 SSPSAPVAVSSTYTS-SPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSALVVL 780
Cdd:PRK14951  369 AAEAAAPAEKKTPARpEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448

                          90
                  ....*....|....*
gi 6320628    781 SSTSTSSPYDIVYSP 795
Cdd:PRK14951  449 PAPPAQAAPETVAIP 463

rad23

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

691-773

2.78e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.19 E-value: 2.78e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     691 SAPAAISSTYTSSPSAPvavSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 770
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATP---TSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAASTLV 151


                   ...
gi 6320628     771 TSS 773
Cdd:TIGR00601  152 VGS 154

PRK07764

DNA polymerase III subunits gamma and tau; Validated

445-667

2.81e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 2.81e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    445 PSAYISFSSVPVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPvavsstyTSSPSA 524
Cdd:PRK07764  584 VEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAP-------EHHPKH 656

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    525 PAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytSSPSAPVAVSSTYTSSPSAPVAISSTYTSSPSVPVAVSSTYtS 604
Cdd:PRK07764  657 VAVPDASDGGDGWPAKAGGAAPAAPPPAPAP------AAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA-S 729

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6320628    605 SPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytSSPSVPVAVSSTYTSSPSAPAA 667
Cdd:PRK07764  730 APSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAP------APAAAPAAAPPPSPPSEEEEMA 786

CLEC16A_C

CLEC16A C-terminal; This is the C-terminal domain of C-type lectin domain family 16, member A ...

522-670

4.46e-03

Pssm-ID: 466083 Cd Length: 762 Bit Score: 41.79 E-value: 4.46e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     522 PSAPAAISSTYTSSPSAP---VAV-----SSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPVAISSTyTSSPS 593
Cdd:pfam19439  613 PSDPTVQRSVFASVDKVPgfaVAQcinqhSPSPLSSPSPPSSSSGSGSTGRCDSVTASSTSTPSPSDDGSTPEQ-PQLPD 691

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628     594 VPVAVSSTytsspSAPAAISSTYTSSPSAPVAVSSTYTsspSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISS 670
Cdd:pfam19439  692 ELAFLDST-----PAVSKPGKSSASSETEPAALAPSLT---PAPQPTISLLSDDSTDALSVESLTLLPPADSPHLRS 760

myxo_dep_M36

NF038112

myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ...

452-665

4.58e-03

Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 41.95 E-value: 4.58e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    452 SSVPVAVSSTytSSPSASVVVPSAYASSPSVPVAVSSTYTSSpsAPAAISSTYTSSPSAPVA---------VSSTYTSSP 522
Cdd:NF038112 1321 SGPAVTLTGA--TTATATFTAPEVTADTQLTFTLTVSDGTAS--ATDTVTVTVRNVNRAPVAnagadqtvdERSTVTLSG 1396

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    523 SAP----AAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYT-----------SSPSAPVAVSSTYTSSPSAPVAissT 587
Cdd:NF038112 1397 SATdpdgDALTYAWTQTAGPTVTLTGADTATASFTAPEVAADTeltfqltvsadGQASADVTVTVTVRNVNRAPVA---H 1473

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    588 YTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSA--PVAVSSTYTSSPS--APAAISSTY---------TSSPSVPVAV 654
Cdd:NF038112 1474 AGESITVDEGSTVTLDASATDPDGDTLTYAWTQVAgpSVTLTGADSAKLTftAPEVSADTTltfsltvtdGSGSSGPVVV 1553

                         250
                  ....*....|.
gi 6320628    655 SSTYTSSPSAP 665
Cdd:NF038112 1554 TVTVKNVNRAP 1564

PRK10856

cytoskeleton protein RodZ;

589-675

4.73e-03

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 41.17 E-value: 4.73e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    589 TSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPsVPVAVSSTYTSSPSAPAAI 668
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAP-AAPATPDGAAPLPTDQAGV 244


                  ....*..
gi 6320628    669 SSTYTSS 675
Cdd:PRK10856  245 STPAADP 251

kgd

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

577-683

5.04e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.80 E-value: 5.04e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    577 SPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytSSPSVPVAVSS 656
Cdd:PRK12270   40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAA------AAAAAPAAAAV 113

                          90       100
                  ....*....|....*....|....*....
gi 6320628    657 TYTSSP--SAPAAISSTYTSSPSVPVAVS 683
Cdd:PRK12270  114 EDEVTPlrGAAAAVAKNMDASLEVPTATS 142

PLN02217

probable pectinesterase/pectinesterase inhibitor

397-506

5.07e-03

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 41.61 E-value: 5.07e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    397 SSTNTVPYSSVHSTFvhatsSSTYISSSLYSSPSLSASVSSHFGVAPfpsayisfsSVPVAVSSTYTSSPSASVVVPSAY 476
Cdd:PLN02217  567 GSTNSTPTGSAASSN-----TTFSSDSPSTVVAPSTSPPAGHLGSPP---------ATPSKIVSPSTSPPASHLGSPSTT 632

                          90       100       110
                  ....*....|....*....|....*....|
gi 6320628    477 ASSPSVPVAVSSTYTSSPSAPAAISSTYTS 506
Cdd:PLN02217  633 PSSPESSIKVASTETASPESSIKVASTESS 662

rad23

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

482-555

5.66e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.03 E-value: 5.66e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6320628     482 VPVAVSSTYTSSPSA---PAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPV-AVSSTYTSSPSAPAA 555
Cdd:TIGR00601   70 VVVMVSKPKTGTGKVappAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATApESPSTSVPSSGSDAA 147

rad23

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

678-751

5.66e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.03 E-value: 5.66e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6320628     678 VPVAVSSTYTSSPSA---PAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPV-AVSSTYTSSPSAPAA 751
Cdd:TIGR00601   70 VVVMVSKPKTGTGKVappAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATApESPSTSVPSSGSDAA 147

PRK10856

cytoskeleton protein RodZ;

478-568

5.93e-03

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 40.78 E-value: 5.93e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    478 SSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPsAPVAVSSTYTSSPSAPAAIS 557
Cdd:PRK10856  167 STTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAP-AAPATPDGAAPLPTDQAGVS 245

                          90
                  ....*....|.
gi 6320628    558 STyTSSPSAPV 568
Cdd:PRK10856  246 TP-AADPNALV 255

PRK10856

cytoskeleton protein RodZ;

575-667

6.25e-03

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 40.78 E-value: 6.25e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    575 TSSPSAPVAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTyTSSPSVPVAV 654
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGA-APLPTDQAGV 244

                          90
                  ....*....|...
gi 6320628    655 sstytsspSAPAA 667
Cdd:PRK10856  245 --------STPAA 249

kgd

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

661-767

7.06e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.41 E-value: 7.06e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    661 SPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAisstytSSPSAPVAVSS 740
Cdd:PRK12270   40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAA------AAAAAPAAAAV 113

                          90       100
                  ....*....|....*....|....*....
gi 6320628    741 TYTSSP--SAPAAISSTYTSSPSAPVAVS 767
Cdd:PRK12270  114 EDEVTPlrGAAAAVAKNMDASLEVPTATS 142

2A1904

TIGR00927

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...

445-765

7.22e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]

Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 41.52 E-value: 7.22e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     445 PSAYISFSSV-PVAVSSTYTSSPSASVVVPSAYASSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPS 523
Cdd:TIGR00927   48 PSLWAAVSSQqPIKLASRDLSNDEMMMVSSDPPKSSSEMEGEMLAPQATVGRDEATPSIAMENTPSPPRRTAKITPTTPK 127

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     524 -----APAAISSTYTSSPSAPVAVSSTYTSSPSAPaaISSTYTSSPSAPVAvsstyTSSPSAPVAISSTYTSSP---SVP 595
Cdd:TIGR00927  128 nnyspTAAGTERVKEDTPATPSRALNHYISTSGRQ--RVKSYTPKPRGEVK-----SSSPTQTREKVRKYTPSPlgrMVN 200

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     596 VAVSSTYTSSPSApAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTS----SPSVPV-AVSSTYTSSPSAPAAISS 670
Cdd:TIGR00927  201 SYAPSTFMTMPRS-HGITPRTTVKDSEITATYKMLETNPSKRTAGKTTPTPlkgmTDNTPTfLTREVETDLLTSPRSVVE 279

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628     671 TYTSSPSVPVAVSSTYT-------SSPSAPAAISSTYTSSPS-APVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTY 742
Cdd:TIGR00927  280 KNTLTTPRRVESNSSTNhwglvgkNNLTTPQGTVLEHTPATSeGQVTISIMTGSSPAETKASTAAWKIRNPLSRTSAPAV 359

                          330       340
                   ....*....|....*....|...
gi 6320628     743 TSSPSAPAAISSTYTSSPSAPVA 765
Cdd:TIGR00927  360 RIASATFRGLEKNPSTAPSTPAT 382

PRK07994

DNA polymerase III subunits gamma and tau; Validated

620-776

7.39e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.00 E-value: 7.39e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320628    620 PSAPVAvsstytsSPSAPAAisstytSSPSVPVAVSSTYTSSPSAPAAISSTYTSSPSVPVAVSSTYTSSPSAPAAISST 699
Cdd:PRK07994  361 PAAPLP-------EPEVPPQ------SAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQ 427

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6320628    700 YTSSPSAPVAVSStytSSPSAPAAISSTyTSSPSAPVAVSSTYTSSPSAPAAiSSTYTSSPSAPVAVSSTYTSSPSA 776
Cdd:PRK07994  428 QLQRAQGATKAKK---SEPAAASRARPV-NSALERLASVRPAPSALEKAPAK-KEAYRWKATNPVEVKKEPVATPKA 499

rad23