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Conserved domains on  [gi|6320284|ref|NP_010364|]
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Pet100p [Saccharomyces cerevisiae S288C]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Pet100 super family cl10776
Pet100; Pet100 is a chaperone required for the assembly of cytochrome c oxidase. The human ...
 15-78 2.81e-05

Pet100; Pet100 is a chaperone required for the assembly of cytochrome c oxidase. The human Pet100 homolog (also known as C19orf79) has been shown to be located in the mitochondrial inner membrane and forms a ~300 kDa subcomplex with mitochondrial complex IV subunits.


The actual alignment was detected with superfamily member pfam09803:

Pssm-ID: 462908  Cd Length: 63  Bit Score: 38.70  E-value: 2.81e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6320284     15 QLEIFRFSFCLLAPVAVMYYIGTDTDKKLNV----PGFWPdpatlnqiPKEPyEIKAELARMKKERLE 78
Cdd:pfam09803   5 NLEVFKFGMYLFFPVGIFHYFNQPEYFEEWVvktkREFWP--------PEEK-EIREELERFKRERLA 63
 
Name Accession Description Interval E-value
Pet100 pfam09803
Pet100; Pet100 is a chaperone required for the assembly of cytochrome c oxidase. The human ...
 15-78 2.81e-05

Pet100; Pet100 is a chaperone required for the assembly of cytochrome c oxidase. The human Pet100 homolog (also known as C19orf79) has been shown to be located in the mitochondrial inner membrane and forms a ~300 kDa subcomplex with mitochondrial complex IV subunits.


Pssm-ID: 462908  Cd Length: 63  Bit Score: 38.70  E-value: 2.81e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6320284     15 QLEIFRFSFCLLAPVAVMYYIGTDTDKKLNV----PGFWPdpatlnqiPKEPyEIKAELARMKKERLE 78
Cdd:pfam09803   5 NLEVFKFGMYLFFPVGIFHYFNQPEYFEEWVvktkREFWP--------PEEK-EIREELERFKRERLA 63
 
Name Accession Description Interval E-value
Pet100 pfam09803
Pet100; Pet100 is a chaperone required for the assembly of cytochrome c oxidase. The human ...
 15-78 2.81e-05

Pet100; Pet100 is a chaperone required for the assembly of cytochrome c oxidase. The human Pet100 homolog (also known as C19orf79) has been shown to be located in the mitochondrial inner membrane and forms a ~300 kDa subcomplex with mitochondrial complex IV subunits.


Pssm-ID: 462908  Cd Length: 63  Bit Score: 38.70  E-value: 2.81e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6320284     15 QLEIFRFSFCLLAPVAVMYYIGTDTDKKLNV----PGFWPdpatlnqiPKEPyEIKAELARMKKERLE 78
Cdd:pfam09803   5 NLEVFKFGMYLFFPVGIFHYFNQPEYFEEWVvktkREFWP--------PEEK-EIREELERFKRERLA 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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