NCBI Conserved Domain Search

Conserved domains on [gi|735997426|ref|NP_005798|]

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proteoglycan 4 isoform A preproprotein [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1143-1403

1.17e-44

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.17e-44

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426 1143 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1221
Cdd:cd00094     1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426 1222 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1300
Cdd:cd00094    79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426 1301 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1380
Cdd:cd00094   137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                         250       260
                  ....*....|....*....|...
gi 735997426 1381 PSRTARAITTRSGqtlSKVWYNC 1403
Cdd:cd00094   175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247 super family

cl33720

large tegument protein UL36; Provisional

374-839

4.66e-26

large tegument protein UL36; Provisional

The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 117.35 E-value: 4.66e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  374 APTTPKEPAPTTTKSAPttPKEPAP-------------TTTKEPAPTTPKEPAPtttkePAPTTTKSAPttPKEPAPtTP 440
Cdd:PHA03247 2508 APPAPSRLAPAILPDEP--VGEPVHprmltwirgleelASDDAGDPPPPLPPAA-----PPAAPDRSVP--PPRPAP-RP 2577

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  441 KKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP-------------TTPKEPAPTTPKEPA 507
Cdd:PHA03247 2578 SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPspspaanepdphpPPTVPPPERPRDDPA 2657

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  508 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT-----TPKEPAPTTPKKPAPTTPK 582
Cdd:PHA03247 2658 PGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHalvsaTPLPPGPAAARQASPALPA 2737

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  583 EPAP----TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeelapttpeEPTP 658
Cdd:PHA03247 2738 APAPpavpAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDP---------ADPP 2808

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  659 TTPEEPAPTTPKAAAPNTPkEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT----APTTLKEPAPTTPKKPAPKELA 734
Cdd:PHA03247 2809 AAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLA 2887

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  735 PTTTKEPTSTTSDKP-APTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTST 813
Cdd:PHA03247 2888 RPAVSRSTESFALPPdQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967

                         490       500
                  ....*....|....*....|....*..
gi 735997426  814 TSDKPAPTTPKETAPTTPKE-PAPTTP 839
Cdd:PHA03247 2968 VPGRVAVPRFRVPQPAPSREaPASSTP 2994

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.15e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.15e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997426     66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.88e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.88e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997426     26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

PRK13335 super family

cl31400

superantigen-like protein SSL3; Reviewed;

304-441

6.55e-03

superantigen-like protein SSL3; Reviewed;

The actual alignment was detected with superfamily member PRK13335:

Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.49 E-value: 6.55e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  304 TTSAKETQSIEKTSAkDLAPTSKV--LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEP 381
Cdd:PRK13335   24 TTQSVKAEKIQSTKV-DKVPTLKAerLAMINITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEE 102

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  382 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-----TTTKSAPTTPKEPAPTTPK 441
Cdd:PRK13335  103 QKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPmqstkSDTPQSPTIKQAQTDMTPK 167

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1143-1403

1.17e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.17e-44

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426 1143 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1221
Cdd:cd00094     1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426 1222 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1300
Cdd:cd00094    79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426 1301 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1380
Cdd:cd00094   137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                         250       260
                  ....*....|....*....|...
gi 735997426 1381 PSRTARAITTRSGqtlSKVWYNC 1403
Cdd:cd00094   175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

374-839

4.66e-26

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 117.35 E-value: 4.66e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  374 APTTPKEPAPTTTKSAPttPKEPAP-------------TTTKEPAPTTPKEPAPtttkePAPTTTKSAPttPKEPAPtTP 440
Cdd:PHA03247 2508 APPAPSRLAPAILPDEP--VGEPVHprmltwirgleelASDDAGDPPPPLPPAA-----PPAAPDRSVP--PPRPAP-RP 2577

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  441 KKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP-------------TTPKEPAPTTPKEPA 507
Cdd:PHA03247 2578 SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPspspaanepdphpPPTVPPPERPRDDPA 2657

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  508 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT-----TPKEPAPTTPKKPAPTTPK 582
Cdd:PHA03247 2658 PGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHalvsaTPLPPGPAAARQASPALPA 2737

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  583 EPAP----TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeelapttpeEPTP 658
Cdd:PHA03247 2738 APAPpavpAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDP---------ADPP 2808

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  659 TTPEEPAPTTPKAAAPNTPkEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT----APTTLKEPAPTTPKKPAPKELA 734
Cdd:PHA03247 2809 AAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLA 2887

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  735 PTTTKEPTSTTSDKP-APTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTST 813
Cdd:PHA03247 2888 RPAVSRSTESFALPPdQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967

                         490       500
                  ....*....|....*....|....*..
gi 735997426  814 TSDKPAPTTPKETAPTTPKE-PAPTTP 839
Cdd:PHA03247 2968 VPGRVAVPRFRVPQPAPSREaPASSTP 2994

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.15e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.15e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997426     66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.88e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.88e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997426     26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.88e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.88e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 735997426    69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.93e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.93e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 735997426    29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1195-1239

9.63e-11

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.63e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 735997426   1195 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1239
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1195-1237

1.07e-08

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 1.07e-08

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 735997426  1195 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1237
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

Streccoc_I_II

NF033804

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ...

749-906

5.21e-07

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.

Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 54.56 E-value: 5.21e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  749 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAP--TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 826
Cdd:NF033804  825 PKITKEKPTPPVAPTAPQAPTYEVEKPLEPAPVAPTYENEPTPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPTYENEP 904

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  827 AP--TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPttiHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTP 904
Cdd:NF033804  905 TPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPP---VKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTP 981


                  ..
gi 735997426  905 AA 906
Cdd:NF033804  982 PA 983

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

374-752

9.76e-07

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 53.62 E-value: 9.76e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   374 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT--TPKEPAPTTPKKPA--PTTPK 449
Cdd:pfam03154  180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPLQPMtqPPPPS 259

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   450 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKS 529
Cdd:pfam03154  260 QVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP 339

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   530 APTTTKEPAPTTTKSAPTTPKEPSPTTtkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTttkkpapttpkepa 609
Cdd:pfam03154  340 PREQPLPPAPLSMPHIKPPPTTPIPQL---PNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSL-------------- 402

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   610 pTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPA 689
Cdd:pfam03154  403 -STHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGP 481

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997426   690 PTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 752
Cdd:pfam03154  482 PTSTSSAMPGIqPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPT 545

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

379-587

4.31e-06

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 51.59 E-value: 4.31e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  379 KEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepapttPKE 458
Cdd:COG5665   276 TNQLTTSNTPTSTAKAQPQPPTKKQPAKEPPSDTASG---NPSAPSVLINSDSPTSEDPATASVPTT----------EET 342

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  459 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 538
Cdd:COG5665   343 TAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVDKKVSPDSATSSTKSEKEGGTASSPMPPNIAIGAKDDVDATDPS 422

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 735997426  539 PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPT 587
Cdd:COG5665   423 QEAKEYTKNAPMTPEADSAPESSVRTEASPSAGSDLEPENTTLRDPAPN 471

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

384-450

9.15e-06

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 49.51 E-value: 9.15e-06

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426   384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT-PKKPAPTTPKE 450
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVPSS 142

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

671-800

2.39e-05

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 48.22 E-value: 2.39e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:NF040712  200 ATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGE 279

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 735997426  751 PTTPKGTAPTTPKEPAPTTPKEPA-PTTPKGTAPTTLKEPAPTTPKKPAPK 800
Cdd:NF040712  280 PPAPGAAETPEAAEPPAPAPAAPAaPAAPEAEEPARPEPPPAPKPKRRRRR 330

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

473-589

2.96e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.76 E-value: 2.96e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  473 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkePAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT-PKE 551
Cdd:NF040712  208 EPADARPEEVEPAPAAEGAPATDSDPAEAGT--PDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPaPGA 285

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 735997426  552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:NF040712  286 AETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

377-519

7.27e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 7.27e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  377 TPKEPAPTTTKSAPTTPkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT--PKEPAPTTPKKPAPTTPKEPAPT 454
Cdd:NF040712  191 DFGRPLRPLATVPRLAR-EPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  455 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 519
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

383-519

1.16e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.83 E-value: 1.16e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  383 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPT 462
Cdd:NF040712  190 PDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 735997426  463 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTtpkEPAPTTPKEPAPTTTKEPSPTTP 519
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPA---APAAPAAPEAEEPARPEPPPAPK 323

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

509-878

1.27e-03

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.22 E-value: 1.27e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  509 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPkepAPTTPKKPAPTTPKEPAPTT 588
Cdd:NF033839  119 STSKSQLQKLMMESQSKVDEAVSKFEKDSSSSSSSGSSTKPETPQPENPEHQKPTTP---APDTKPSPQPEGKKPSVPDI 195

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  589 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTT 668
Cdd:NF033839  196 NQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKF 275

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  669 PKAAAPNTPKEP------APTTPKEPAPTTPKEPAPTTPKETAP-TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 741
Cdd:NF033839  276 KKGLTQDTPKEPgnkkpsAPKPGMQPSPQPEKKEVKPEPETPKPeVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  742 TSTTSDKPApTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK-KPAPKELAPTTTKGPTSTTSD-KPA 819
Cdd:NF033839  356 PQPEKPKPE-VKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEvKPQ 434

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997426  820 PTTPK---ETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTP 878
Cdd:NF033839  435 PEKPKpevKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKP 496

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

326-572

1.59e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.83 E-value: 1.59e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  326 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP-APTTTKEP 404
Cdd:NF033839  277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLeTPKPEVKP 356

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  405 APTTPKEPAPTTTKEPAPTTtKSAPTTPK---EPAPTTPK---KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Cdd:NF033839  357 QPEKPKPEVKPQPEKPKPEV-KPQPETPKpevKPQPEKPKpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 435

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  479 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Cdd:NF033839  436 EKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTN 515

                         250
                  ....*....|....
gi 735997426  559 EPAPTTPKEPAPTT 572
Cdd:NF033839  516 EKATNKPKKSLPST 529

PRK13335

superantigen-like protein SSL3; Reviewed;

304-441

6.55e-03

superantigen-like protein SSL3; Reviewed;

Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.49 E-value: 6.55e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  304 TTSAKETQSIEKTSAkDLAPTSKV--LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEP 381
Cdd:PRK13335   24 TTQSVKAEKIQSTKV-DKVPTLKAerLAMINITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEE 102

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  382 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-----TTTKSAPTTPKEPAPTTPK 441
Cdd:PRK13335  103 QKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPmqstkSDTPQSPTIKQAQTDMTPK 167

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

373-440

7.94e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 7.94e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  373 SAPTTPKEPAPTTTkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP 440
Cdd:NF041121   19 AAPPSPEGPAPTAA-SQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAP 85

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1143-1403

1.17e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.17e-44

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426 1143 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1221
Cdd:cd00094     1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426 1222 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1300
Cdd:cd00094    79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426 1301 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1380
Cdd:cd00094   137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                         250       260
                  ....*....|....*....|...
gi 735997426 1381 PSRTARAITTRSGqtlSKVWYNC 1403
Cdd:cd00094   175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

374-839

4.66e-26

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 117.35 E-value: 4.66e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  374 APTTPKEPAPTTTKSAPttPKEPAP-------------TTTKEPAPTTPKEPAPtttkePAPTTTKSAPttPKEPAPtTP 440
Cdd:PHA03247 2508 APPAPSRLAPAILPDEP--VGEPVHprmltwirgleelASDDAGDPPPPLPPAA-----PPAAPDRSVP--PPRPAP-RP 2577

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  441 KKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP-------------TTPKEPAPTTPKEPA 507
Cdd:PHA03247 2578 SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPspspaanepdphpPPTVPPPERPRDDPA 2657

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  508 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT-----TPKEPAPTTPKKPAPTTPK 582
Cdd:PHA03247 2658 PGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHalvsaTPLPPGPAAARQASPALPA 2737

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  583 EPAP----TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeelapttpeEPTP 658
Cdd:PHA03247 2738 APAPpavpAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDP---------ADPP 2808

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  659 TTPEEPAPTTPKAAAPNTPkEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT----APTTLKEPAPTTPKKPAPKELA 734
Cdd:PHA03247 2809 AAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLA 2887

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  735 PTTTKEPTSTTSDKP-APTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTST 813
Cdd:PHA03247 2888 RPAVSRSTESFALPPdQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967

                         490       500
                  ....*....|....*....|....*..
gi 735997426  814 TSDKPAPTTPKETAPTTPKE-PAPTTP 839
Cdd:PHA03247 2968 VPGRVAVPRFRVPQPAPSREaPASSTP 2994

PHA03247

large tegument protein UL36; Provisional

397-907

6.15e-25

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 113.88 E-value: 6.15e-25

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKpapTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 476
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPD---EPVGEPVHPRMLTWIRGLEELASDDAGDPPP 2553

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  477 TTPKEPAPTAPKKPAPttPKEPAPtTPKEPAPTTTKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 551
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVP--PPRPAP-RPSEPAVTSRARrpdapPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  552 PSPTTTKEPAPTTPKEPAPTTPKK-PAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 630
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  631 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPaPTTPKEPAPTTPKEPAPTTPKETAPTTPK 710
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  711 GTAPTTLKEPAPTTPKK-PAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT-----------------PKE 772
Cdd:PHA03247 2790 SLSESRESLPSPWDPADpPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrpPSR 2869

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  773 PAPTTPKGTA-PTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 851
Cdd:PHA03247 2870 SPAAKPAAPArPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 735997426  852 PTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 907
Cdd:PHA03247 2950 AGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.15e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.15e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997426     66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

PHA03247

large tegument protein UL36; Provisional

376-769

6.86e-19

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 93.85 E-value: 6.86e-19

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  376 TTPKEPAPTTTKSAPTTPKEPAPTTTKEPaPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPaPTTPKKPAPTTPKEPAPTT 455
Cdd:PHA03247 2621 THAPDPPPPSPSPAANEPDPHPPPTVPPP-ERPRDDPAPGRVSRPRRARRLGRAAQASSP-PQRPRRRAARPTVGSLTSL 2698

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  456 PKEPTPTTPKEPApttkePAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTK 535
Cdd:PHA03247 2699 ADPPPPPPTPEPA-----PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPA 2773

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  536 EPAPTTTKSAPTTPKEP-SPTTTKEPAPTTPKEPAPTTPkKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPK 614
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASlSESRESLPSPWDPADPPAAVL-APAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  615 ETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPttpkaaaPNTPKEPAPTTPKEPAPTTPK 694
Cdd:PHA03247 2853 GGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQ-------PERPPQPQAPPPPQPQPQPPP 2925

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997426  695 EPAPTTPKETAPTTPKGTAPTTLKEPAP-TTPKKPAPKELAPTT-TKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT 769
Cdd:PHA03247 2926 PPQPQPPPPPPPRPQPPLAPTTDPAGAGePSGAVPQPWLGALVPgRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.88e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.88e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997426     26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.88e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.88e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 735997426    69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

PHA03247

large tegument protein UL36; Provisional

404-915

3.95e-18

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 91.15 E-value: 3.95e-18

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  404 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKepAPTTPKKPAPT-----TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Cdd:PHA03247 2478 PVYRRPAEARFPFAAGAAPDPGGGGPPDPD--APPAPSRLAPAilpdePVGEPVHPRMLTWIRGLEELASDDAGDPPPPL 2555

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  479 PKEPAPTAPKKPAPttPKEPAPTtPKEPApTTTKEPSPTTPKEPAPtttksaptttkepaptttksaPTTPKEPsptttk 558
Cdd:PHA03247 2556 PPAAPPAAPDRSVP--PPRPAPR-PSEPA-VTSRARRPDAPPQSAR---------------------PRAPVDD------ 2604

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  559 epaPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 638
Cdd:PHA03247 2605 ---RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQ 2681

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  639 KPAPttpeelapttpeeptpttpeepapttpkaaaPNTPKEPAPTTPKEPAPTTPKEPAPTtPKETAPTTPKGTAPTTLK 718
Cdd:PHA03247 2682 RPRR-------------------------------RAARPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPGPAAAR 2729

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  719 EPAPTTPKKPAPKELAPTTTKeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPA 798
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPAT---------PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS 2800

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  799 PKELAPTT----TKGPTSTTSDKPAPTTPKET-----APTTPKEPAPTT------------------PKKPAPTTPETPP 851
Cdd:PHA03247 2801 PWDPADPPaavlAPAAALPPAASPAGPLPPPTsaqptAPPPPPGPPPPSlplggsvapggdvrrrppSRSPAAKPAAPAR 2880

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  852 PTTSEVSTPTTTKEPTTIHKSPDE----STPELSAEPTPKALENSPKEPgVPTTKTPAATKPEMTTTA 915
Cdd:PHA03247 2881 PPVRRLARPAVSRSTESFALPPDQperpPQPQAPPPPQPQPQPPPPPQP-QPPPPPPPRPQPPLAPTT 2947

PHA03247

large tegument protein UL36; Provisional

383-710

2.04e-17

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 88.84 E-value: 2.04e-17

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  383 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPT---TPKEPAPTTPKEP 459
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaapAPPAVPAGPATPG 2752

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  460 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 539
Cdd:PHA03247 2753 GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPT 2832

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  540 TTTKSAPTTPKEPSPTTTKEPAPTTPKEP----APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 615
Cdd:PHA03247 2833 SAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQ 2912

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  616 TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeeLAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPkEPAPTTPKe 695
Cdd:PHA03247 2913 APPPPQPQPQPPPPPQPQPPPPPPPRPQPP--LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVP-QPAPSREA- 2988

                         330
                  ....*....|....*
gi 735997426  696 PAPTTPKETAPTTPK 710
Cdd:PHA03247 2989 PASSTPPLTGHSLSR 3003

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.93e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.93e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 735997426    29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

PRK12323

DNA polymerase III subunit gamma/tau;

388-589

7.89e-11

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 66.82 E-value: 7.89e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  388 SAPTTPKE-PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepaptTPKEPTPTTPKE 466
Cdd:PRK12323  372 AGPATAAAaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAP---------EALAAARQASAR 442

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  467 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPK---EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 543
Cdd:PRK12323  443 GPGGAPAPAPAPAAAPAAAARPAAAGPRPVaaaAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWV 522

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 735997426  544 SAPTtpkePSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP--APTTP 589
Cdd:PRK12323  523 AESI----PDPATADPDDAFETLAPAPAAAPAPRAAAATEPvvAPRPP 566

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1195-1239

9.63e-11

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.63e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 735997426   1195 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1239
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

PHA03247

large tegument protein UL36; Provisional

480-1080

6.06e-09

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 61.11 E-value: 6.06e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  480 KEPAPTAPKKPAPTTPKEPAPTTPKePAPTTTKEPSPTTPKEPAPTTTKS-APTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Cdd:PHA03247 2471 GELFPGAPVYRRPAEARFPFAAGAA-PDPGGGGPPDPDAPPAPSRLAPAIlPDEPVGEPVHPRMLTWIRGLEELASDDAG 2549

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  559 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPkepaptttkkpaPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 638
Cdd:PHA03247 2550 DPPPPLPPAAPPAAPDRSVPPPRPAPRPSEP------------AVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPL 2617

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  639 KPAPTTPEelapttpeeptpttpeepAPTTPKAAAPNTPKEPAPTtPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlk 718
Cdd:PHA03247 2618 PPDTHAPD------------------PPPPSPSPAANEPDPHPPP-TVPPPERPRDDPAPGRVSRPRRARRLGRAAQ--- 2675

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  719 epAPTTPKKPAPKELaptttkeptsttSDKPAPTTPKGTAPTTPKEPAPTtPKEPAPTTPKGTAPTTLKEPAPTTPKKPA 798
Cdd:PHA03247 2676 --ASSPPQRPRRRAA------------RPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPGPAAARQASPALPAAPA 2740

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  799 PKELAPTTTKgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVStptttkepttihkSPDESTP 878
Cdd:PHA03247 2741 PPAVPAGPAT---------PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASL-------------SESRESL 2798

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  879 ELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAkdktterdlrttpetttaapkmtketatttekTTESKITATTT 958
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQ--------------------------------PTAPPPPPGPP 2846

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  959 QVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPeetakPKDRATNSKATTPKPQKPTKAPKKPTSTKKPK 1038
Cdd:PHA03247 2847 PPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARP-----AVSRSTESFALPPDQPERPPQPQAPPPPQPQP 2921

                         570       580       590       600
                  ....*....|....*....|....*....|....*....|..
gi 735997426 1039 TMPRvrKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPN 1080
Cdd:PHA03247 2922 QPPP--PPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ 2961

PRK07764

DNA polymerase III subunits gamma and tau; Validated

380-591

7.48e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.38 E-value: 7.48e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  380 EPAPTTTKSAPTTPKEPAPtttKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 459
Cdd:PRK07764  587 VVGPAPGAAGGEGPPAPAS---SGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  460 TPTtpkepapttkEPAPTTPKEPAPTAPKkPAPTTPKEPAPTTPKEPAPTTTkePSPTTPKEPAPTTTKSAPTTTKEPAP 539
Cdd:PRK07764  664 DGG----------DGWPAKAGGAAPAAPP-PAPAPAAPAAPAGAAPAQPAPA--PAATPPAGQADDPAAQPPQAAQGASA 730

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 735997426  540 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 591
Cdd:PRK07764  731 PSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1195-1237

1.07e-08

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 1.07e-08

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 735997426  1195 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1237
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

rne

PRK10811

ribonuclease E; Reviewed

384-569

4.88e-08

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 57.74 E-value: 4.88e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 463
Cdd:PRK10811  848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAP-VVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTE 926

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  464 PKEPAPTTKEP-APTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT 542
Cdd:PRK10811  927 QPQVITESDVAvAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006

                         170       180
                  ....*....|....*....|....*..
gi 735997426  543 KSAPTTPKEPSPTTTKEPAPTTPKEPA 569
Cdd:PRK10811 1007 PEATVEHNHATAPMTRAPAPEYVPEAP 1033

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

301-583

5.19e-08

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 57.78 E-value: 5.19e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  301 KEKTTSAKETQSIEKTSAKDlAPTSKVLAKPTPKAE-TTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 379
Cdd:PTZ00449  532 GEHEDSKESDEPKEGGKPGE-TKEGEVGKKPGPAKEhKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK 610

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  380 EPAPTTTKSAPTTPKEP-APTTTKEP-APTTPKEPA-PTTTKEPaptTTKSAPTTPKEP-APTTPKKPAPTTPKEPAPTT 455
Cdd:PTZ00449  611 SPKLPELLDIPKSPKRPeSPKSPKRPpPPQRPSSPErPEGPKII---KSPKPPKSPKPPfDPKFKEKFYDDYLDAAAKSK 687

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  456 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPA--PTTPKEPApTTPKEPAPTTTKEPSPTTPkePAPTTTKSAPTT 533
Cdd:PTZ00449  688 ETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPklPRDEEFPF-EPIGDPDAEQPDDIEFFTP--PEEERTFFHETP 764

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 735997426  534 TKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA--PTTPKE 583
Cdd:PTZ00449  765 ADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPGdhPSLPKK 816

PRK12323

DNA polymerase III subunit gamma/tau;

484-709

5.94e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.19 E-value: 5.94e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  484 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEpSPTTTKEPAPT 563
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASAR-GPGGAPAPAPA 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  564 TPKEPAPTTPkkPAPTTPKEPAPTTPkepaptttkkpapttpkePAPTTPKETAPTTPKKLTPTTPEKLAPTTPEkPAPT 643
Cdd:PRK12323  454 PAAAPAAAAR--PAAAGPRPVAAAAA------------------AAPARAAPAAAPAPADDDPPPWEELPPEFAS-PAPA 512

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997426  644 TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTtpkePAPTTPKETAPTTP 709
Cdd:PRK12323  513 QPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV----VAPRPPRASASGLP 574

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

373-450

8.35e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.21 E-value: 8.35e-08

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

PRK07003

DNA polymerase III subunit gamma/tau;

395-573

9.08e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 56.78 E-value: 9.08e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  395 EPAPTTTKEPAPTTPKE-----PAPTTTKEPAPTTTKSAPTTPKEPAPT---TPKKPAPTTPKEPAPTTPKEPTPTTPKE 466
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARvagavPAPGARAAAAVGASAVPAVTAVTGAAGaalAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  467 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEpsPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 546
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP--PDAAFEPAPRAAAPSAATPAAVPDARAPAAA 516

                         170       180
                  ....*....|....*....|....*...
gi 735997426  547 TTPKEPSPttTKEPAP-TTPKEPAPTTP 573
Cdd:PRK07003  517 SREDAPAA--AAPPAPeARPPTPAAAAP 542

PRK07994

DNA polymerase III subunits gamma and tau; Validated

432-589

1.00e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.41 E-value: 1.00e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  432 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 511
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  512 KEPSPTTPKEPAPTTTKSAPTTtkEPAPTTTKSAPTtPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:PRK07994  441 SEPAAASRARPVNSALERLASV--RPAPSALEKAPA-KKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAK 515

PRK07764

DNA polymerase III subunits gamma and tau; Validated

474-839

1.08e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 56.53 E-value: 1.08e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK-EP 552
Cdd:PRK07764  403 AAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAApAP 482

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPK--------ETAPTTPKKL 624
Cdd:PRK07764  483 APPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLPEATVLGVRgdtlvlgfSTGGLARRFA 562

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  625 TPTTPEKL------------------APTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 686
Cdd:PRK07764  563 SPGNAEVLvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAA 642

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  687 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPttpkEPA 766
Cdd:PRK07764  643 PAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQAD----DPA 718

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997426  767 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTP 839
Cdd:PRK07764  719 AQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAP 791

PRK10263

DNA translocase FtsK; Provisional

381-587

1.21e-07

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 56.63 E-value: 1.21e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  381 PAPTTTKSAPTTPKEPA---PTTTKEPAPTtPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepAPTTPK 457
Cdd:PRK10263  336 PVEPVTQTPPVASVDVPpaqPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQ---PYYAPA 411

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  458 EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKE-PSPTTPKEPAPTTTKSAPTTTKE 536
Cdd:PRK10263  412 AEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTyQQPAAQEPLYQQPQPVEQQPVVE 491

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997426  537 PAPTTTKSAPTTPK----------------------EPSPTTTKEPAPTTPKEPAPTTPKKPapttPKEPAPT 587
Cdd:PRK10263  492 PEPVVEETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560

PRK12323

DNA polymerase III subunit gamma/tau;

671-882

1.23e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.42 E-value: 1.23e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  671 AAAPNTPKEPA--PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDK 748
Cdd:PRK12323  378 AAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAA 457

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  749 PAPTTPKGTAPttPKEPAPTTPKEPAPTTPkgtAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAP 828
Cdd:PRK12323  458 PAAAARPAAAG--PRPVAAAAAAAPARAAP---AAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATA 532

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 735997426  829 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA 882
Cdd:PRK12323  533 DPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPALAA 586

PRK07764

DNA polymerase III subunits gamma and tau; Validated

373-705

1.92e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.76 E-value: 1.92e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTtkEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:PRK07764  400 SAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS--PAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPT 477

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  453 PTTPKEPTPTTPKEPAPttKEPAPTTPKEPAPTAP-----------------------KKPAPT---------------- 493
Cdd:PRK07764  478 AAPAPAPPAAPAPAAAP--AAPAAPAAPAGADDAAtlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstg 555

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  494 -----------------------------------TPKEPAPTTPKEPAPTT--TKEPSPTTPKEPAPTTTKSAPTTTKE 536
Cdd:PRK07764  556 glarrfaspgnaevlvtalaeelggdwqveavvgpAPGAAGGEGPPAPASSGppEEAARPAAPAAPAAPAAPAPAGAAAA 635

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  537 PAPTTTKSAPTTPkePSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 616
Cdd:PRK07764  636 PAEASAAPAPGVA--APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ 713

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  617 APTTPKKLTPTTPEKLAPTTPEKPAPTTPEElAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 696
Cdd:PRK07764  714 ADDPAAQPPQAAQGASAPSPAADDPVPLPPE-PDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPS 792


                  ....*....
gi 735997426  697 APTTPKETA 705
Cdd:PRK07764  793 MDDEDRRDA 801

PHA03307

transcriptional regulator ICP4; Provisional

373-782

2.41e-07

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 55.56 E-value: 2.41e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPkepa 452
Cdd:PHA03307   61 ACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP-----PPTPPPASPPPSPA---- 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  453 ptTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTApkkPAPTTPKEPAPTTPKEPAPtttkEPSPTTPKEPAptttksapt 532
Cdd:PHA03307  132 --PDLSEMLRPVGSPGPPPAASPPAAGASPAAVA---SDAASSRQAALPLSSPEET----ARAPSSPPAEP--------- 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  533 tTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTtpkePAPTT 612
Cdd:PHA03307  194 -PPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPI----TLPTR 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  613 PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAA---APNTPKEPAPTTPKEPA 689
Cdd:PHA03307  269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSStssSSESSRGAAVSPGPSPS 348

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  690 PTtpkePAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKepAPTT 769
Cdd:PHA03307  349 RS----PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLD--AGAA 422

                         410
                  ....*....|...
gi 735997426  770 PKEPAPTTPKGTA 782
Cdd:PHA03307  423 SGAFYARYPLLTP 435

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

475-583

2.60e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 55.20 E-value: 2.60e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  475 APTTPKEPAPTAPKKPAPTTPKePAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkEPAPTTTKSAPttPKEPSP 554
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVR----------------ETATPPPVPPR--PVAPPV 421

                          90       100       110
                  ....*....|....*....|....*....|.
gi 735997426  555 TTTKEPAPTTPKE--PAPTTPKKPAPTTPKE 583
Cdd:PRK14950  422 PHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

381-508

2.68e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 55.11 E-value: 2.68e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  381 PAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 460
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 735997426  461 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkEPAP 508
Cdd:PRK14951  446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARL-TPTE 492

PRK07764

DNA polymerase III subunits gamma and tau; Validated

397-775

3.50e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.99 E-value: 3.50e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 476
Cdd:PRK07764  389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAP 468

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  477 TTPKEPAPTAPKKPAPTTPKEPAPTtPKEPAPTTTKEPSPTTP------------------KEPAPTTTKSAPTTTKEPA 538
Cdd:PRK07764  469 APAAAPEPTAAPAPAPPAAPAPAAA-PAAPAAPAAPAGADDAAtlrerwpeilaavpkrsrKTWAILLPEATVLGVRGDT 547

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  539 PTTTKSAP----------------------------------TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPkeP 584
Cdd:PRK07764  548 LVLGFSTGglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAP--A 625

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  585 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeep 664
Cdd:PRK07764  626 APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPA----------------- 688

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  665 aptTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTkeptst 744
Cdd:PRK07764  689 ---APAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPP------ 759

                         410       420       430
                  ....*....|....*....|....*....|.
gi 735997426  745 tsdkPAPTTPKGTAPTTPKEPAPTTPKEPAP 775
Cdd:PRK07764  760 ----PPPAPAPAAAPAAAPPPSPPSEEEEMA 786

PRK07764

DNA polymerase III subunits gamma and tau; Validated

473-883

3.59e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.99 E-value: 3.59e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  473 EPAPTTPKEPAPTAPKKPAPTtPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPtttKSAPTTPKEP 552
Cdd:PRK07764  391 AGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSP---PPAAAPSAQP 466

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEK- 631
Cdd:PRK07764  467 APAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLPEATVLGVRGd 546

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  632 ---LAPTTPEKP----APTTPEELAPTTPEEPTPT-TPEEPAPTTPKAAAPNTPKEPAPTTP----KEPAPTTPKEPAPT 699
Cdd:PRK07764  547 tlvLGFSTGGLArrfaSPGNAEVLVTALAEELGGDwQVEAVVGPAPGAAGGEGPPAPASSGPpeeaARPAAPAAPAAPAA 626

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  700 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGT-APTTPKEPAPTTPKEPAPTTP 778
Cdd:PRK07764  627 PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPApAPAAPAAPAGAAPAQPAPAPA 706

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  779 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVS 858
Cdd:PRK07764  707 ATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMA 786

                         410       420
                  ....*....|....*....|....*
gi 735997426  859 TPTTTKEPTTIHKSPDESTPELSAE 883
Cdd:PRK07764  787 EDDAPSMDDEDRRDAEEVAMELLEE 811

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

474-577

4.49e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.90 E-value: 4.49e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKEPS 553
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAP-----------------PKPAAAAAAAAAPAAPP 100

                          90       100
                  ....*....|....*....|....
gi 735997426  554 PTTTKEPAPTTPKEPAPTTPKKPA 577
Cdd:PRK12270  101 AAAAAAAPAAAAVEDEVTPLRGAA 124

Streccoc_I_II

NF033804

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ...

749-906

5.21e-07

Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 54.56 E-value: 5.21e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  749 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAP--TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 826
Cdd:NF033804  825 PKITKEKPTPPVAPTAPQAPTYEVEKPLEPAPVAPTYENEPTPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPTYENEP 904

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  827 AP--TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPttiHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTP 904
Cdd:NF033804  905 TPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPP---VKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTP 981


                  ..
gi 735997426  905 AA 906
Cdd:NF033804  982 PA 983

PRK12323

DNA polymerase III subunit gamma/tau;

359-573

5.21e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 54.11 E-value: 5.21e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  359 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkEPAPTTTKSAPTTPKEPAPT 438
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAL-AAARQASARGPGGAPAPAPA 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  439 TPKKPAPTTPkepaPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPtTPKEPAPTTTKEPSPTT 518
Cdd:PRK12323  454 PAAAPAAAAR----PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP-AQPDAAPAGWVAESIPD 528

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  519 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKepsptttkePAPTTPKEPAPTTP 573
Cdd:PRK12323  529 PATADPDDAFETLAPAPAAAPAPRAAAATEPV---------VAPRPPRASASGLP 574

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

373-450

5.27e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 5.27e-07

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtttksAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:PRK12270   45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAA-----APAAPPAAAAAAAPAAAAVEDEV 117

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

375-508

7.21e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 53.56 E-value: 7.21e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  375 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPT 454
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAA---PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 735997426  455 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPkKPAPTTPKEPAPTTPKEPAP 508
Cdd:PRK14951  443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVASA-APAPAAAPAAARLTPTEEGD 495

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

748-840

7.33e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 7.33e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  748 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkgptstTSDKPAPTTPKETA 827
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-------------AAAAAAPAAPPAAA 103

                          90
                  ....*....|...
gi 735997426  828 PTTPKEPAPTTPK 840
Cdd:PRK12270  104 AAAAPAAAAVEDE 116

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

414-523

7.71e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 7.71e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  414 PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkEPAPTTPKEPAPTAPKKPAPT 493
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPA-----------------------PPAAAAPAAPPKPAAAAAAAA 94

                          90       100       110
                  ....*....|....*....|....*....|
gi 735997426  494 TPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 523
Cdd:PRK12270   95 APAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124

PHA03307

transcriptional regulator ICP4; Provisional

321-730

8.70e-07

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 54.02 E-value: 8.70e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  321 LAPTSKVLAKPTPKAettTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPtt 400
Cdd:PHA03307   43 LVSDSAELAAVTVVA---GAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP-- 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  401 tkePAPTTPKEPAPTttkePAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPK 480
Cdd:PHA03307  118 ---PPTPPPASPPPS----PAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPP 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  481 EPAP--TAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Cdd:PHA03307  191 AEPPpsTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIW 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  559 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEpaptttkkpapttPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 638
Cdd:PHA03307  271 EASGWNGPSSRPGPASSSSSPRERSPSPSPSSP-------------GSGPAPSSPRASSSSSSSRESSSSSTSSSSESSR 337

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  639 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLK 718
Cdd:PHA03307  338 GAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPL 417

                         410
                  ....*....|..
gi 735997426  719 EPAPTTPKKPAP 730
Cdd:PHA03307  418 DAGAASGAFYAR 429

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

374-752

9.76e-07

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 53.62 E-value: 9.76e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   374 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT--TPKEPAPTTPKKPA--PTTPK 449
Cdd:pfam03154  180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPLQPMtqPPPPS 259

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   450 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKS 529
Cdd:pfam03154  260 QVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP 339

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   530 APTTTKEPAPTTTKSAPTTPKEPSPTTtkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTttkkpapttpkepa 609
Cdd:pfam03154  340 PREQPLPPAPLSMPHIKPPPTTPIPQL---PNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSL-------------- 402

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   610 pTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPA 689
Cdd:pfam03154  403 -STHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGP 481

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997426   690 PTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 752
Cdd:pfam03154  482 PTSTSSAMPGIqPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPT 545

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

478-772

9.90e-07

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 53.54 E-value: 9.90e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  478 TPKEPAPTAPKKPAPTTpKEPAPTTPKEPA--PTTTKEPSptTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 555
Cdd:PTZ00449  542 EPKEGGKPGETKEGEVG-KKPGPAKEHKPSkiPTLSKKPE--FPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELL 618

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  556 TTkepaPTTPKEP-APTTPKKPAPTTpkepAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKetapttpkkltptTPEKLAP 634
Cdd:PTZ00449  619 DI----PKSPKRPeSPKSPKRPPPPQ----RPSSPERPEGPKIIKSPKPPKSPKPPFDPK-------------FKEKFYD 677

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  635 TTPEKPAPTtpEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP--TTPKEPAPTTPKETAPTTPKGT 712
Cdd:PTZ00449  678 DYLDAAAKS--KETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFpfEPIGDPDAEQPDDIEFFTPPEE 755

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997426  713 APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA--PTTPKGTAPTTPKEpAPTTPKE 772
Cdd:PTZ00449  756 ERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMkrPDSPSEHEDKPPGD-HPSLPKK 816

PRK07994

DNA polymerase III subunits gamma and tau; Validated

378-556

1.50e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 52.56 E-value: 1.50e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  378 PKEPAPtttksAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepaptTPK 457
Cdd:PRK07994  361 PAAPLP-----EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLL---------AAR 426

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  458 EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPtttKEPSPTTPKEPAptttksAPTTTKEP 537
Cdd:PRK07994  427 QQLQRAQGATKAKKSEPAAASRARPVNSALERLASVRP--APSALEKAPAK---KEAYRWKATNPV------EVKKEPVA 495

                         170
                  ....*....|....*....
gi 735997426  538 APTTTKSAPTTPKEPSPTT 556
Cdd:PRK07994  496 TPKALKKALEHEKTPELAA 514

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

670-732

1.54e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.54e-06

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997426  670 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 732
Cdd:PRK12270   52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

PRK07003

DNA polymerase III subunit gamma/tau;

411-589

1.55e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.93 E-value: 1.55e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  411 EPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 490
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  491 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP----K 566
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPaaasR 518

                         170       180
                  ....*....|....*....|....
gi 735997426  567 EPAPTTPKKPAP-TTPKEPAPTTP 589
Cdd:PRK07003  519 EDAPAAAAPPAPeARPPTPAAAAP 542

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

499-591

1.94e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.50 E-value: 1.94e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  499 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTttkEPAPTTPKEPAPTTPKK--P 576
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPV---APPVPHTPESAPKLTRAaiP 437

                          90
                  ....*....|....*
gi 735997426  577 APTTPKEPAPTTPKE 591
Cdd:PRK14950  438 VDEKPKYTPPAPPKE 452

PRK12323

DNA polymerase III subunit gamma/tau;

474-648

2.09e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.19 E-value: 2.09e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  474 PAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPS 553
Cdd:PRK12323  385 PAPAAAAPAAAAPAPAAPPAAP--AAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAA 462

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  554 PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA 633
Cdd:PRK12323  463 RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLA 542

                         170
                  ....*....|....*
gi 735997426  634 PTTPEKPAPTTPEEL 648
Cdd:PRK12323  543 PAPAAAPAPRAAAAT 557

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

696-787

2.22e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.59 E-value: 2.22e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  696 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 775
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117

                          90
                  ....*....|..
gi 735997426  776 TTPKGTAPTTLK 787
Cdd:PRK12270  118 TPLRGAAAAVAK 129

PRK07003

DNA polymerase III subunit gamma/tau;

373-589

2.43e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.16 E-value: 2.43e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTttkSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:PRK07003  407 GAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARA---SADSRCDERDAQPPADSGSASAPASD 483

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPApTAPKKPAPTTPKEPAPTTPkEPAPTTTKEPSPTTPKEPA----PTTTK 528
Cdd:PRK07003  484 APPDAAFEPAPRAAAPSAATPAAVPDARAPA-AASREDAPAAAAPPAPEAR-PPTPAAAAPAARAGGAAAAldvlRNAGM 561

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997426  529 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT-TPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:PRK07003  562 RVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVpTPRARAATGDAPPNGAARAEQAAESR 623

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

374-450

2.44e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 2.44e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  374 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP-----TTPKEPAPTTTKEPAPTTTKSAPTTPKE--PAPTTPKKPAPT 446
Cdd:PRK14950  369 AKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEpvretATPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPA 448


                  ....
gi 735997426  447 TPKE 450
Cdd:PRK14950  449 PPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

513-591

2.45e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 2.45e-06

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997426  513 EPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 591
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

474-589

2.68e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.02 E-value: 2.68e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  474 PAPTTPKEPAPTAP-KKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 735997426  553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:PRK14951  456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

671-788

2.82e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 2.82e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTtpkgTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:PRK14951  378 KKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAP----AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 735997426  751 PTTPKGTAP--TTPKEPAPTTPKEPAPTTPKGTAPTTLKE 788
Cdd:PRK14951  454 QAAPETVAIpvRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

688-790

3.03e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 3.03e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  688 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkeptstTSDKPAPTTPKGTAPTTPKEPAP 767
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPA-------------APPKPAAAAAAAAAPAAPPAAAA 104

                          90       100
                  ....*....|....*....|...
gi 735997426  768 TTPKEPAPTTPKgtaPTTLKEPA 790
Cdd:PRK12270  105 AAAPAAAAVEDE---VTPLRGAA 124

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

413-509

3.53e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.81 E-value: 3.53e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  413 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPApttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAP 492
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAA---------------------AAPAAPPKPAAAAAAAAAP 96

                          90
                  ....*....|....*..
gi 735997426  493 TTPKEPAPTTPKEPAPT 509
Cdd:PRK12270   97 AAPPAAAAAAAPAAAAV 113

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

379-587

4.31e-06

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 51.59 E-value: 4.31e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  379 KEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepapttPKE 458
Cdd:COG5665   276 TNQLTTSNTPTSTAKAQPQPPTKKQPAKEPPSDTASG---NPSAPSVLINSDSPTSEDPATASVPTT----------EET 342

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  459 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 538
Cdd:COG5665   343 TAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVDKKVSPDSATSSTKSEKEGGTASSPMPPNIAIGAKDDVDATDPS 422

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 735997426  539 PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPT 587
Cdd:COG5665   423 QEAKEYTKNAPMTPEADSAPESSVRTEASPSAGSDLEPENTTLRDPAPN 471

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

373-497

4.48e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.96 E-value: 4.48e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKePAPTTtkepAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepa 452
Cdd:PRK14950  345 SYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPT-PAPST----RPKAAAAANIPPKEPVRETATPPPVPPR---- 415

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 735997426  453 pttpkeptptTPKEPAPTTKEPAPTTPKE--PAPTAPKKPAPTTPKE 497
Cdd:PRK14950  416 ----------PVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK12323

DNA polymerase III subunit gamma/tau;

586-785

4.77e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.03 E-value: 4.77e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  586 PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 665
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  666 PTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPtTPKKPAPKELAPTTTKEPTSTT 745
Cdd:PRK12323  455 AAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP-AQPDAAPAGWVAESIPDPATAD 533

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 735997426  746 SDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 785
Cdd:PRK12323  534 PDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGL 573

PRK07994

DNA polymerase III subunits gamma and tau; Validated

373-516

4.94e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 51.02 E-value: 4.94e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP--KEPAPTTPKKPAPTTPKE 450
Cdd:PRK07994  369 EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKKSEPAAASR 448

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997426  451 PAPTTPKEPTPTTPKEPAPTTkePAPTTPKEPAPTAPKKPAPTtpKEPAPTTPKEPAPTTTKEPSP 516
Cdd:PRK07994  449 ARPVNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

373-720

5.35e-06

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 50.73 E-value: 5.35e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPaptttkepaPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:pfam17823   98 SEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAAL---------PSEAFSAPRAAACRANASAAPRAAIAAASAP 168

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 532
Cdd:pfam17823  169 HAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTV 248

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   533 TTKEPApTTTKSAPTTPKEPSPTTTKEPAPTTPkEPAPTTPKKpapTTPKEPAPTTPKEPAPTTTKKPAPTTPKEpapTT 612
Cdd:pfam17823  249 TPAALA-TLAAAAGTVASAAGTINMGDPHARRL-SPAKHMPSD---TMARNPAAPMGAQAQGPIIQVSTDQPVHN---TA 320

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   613 PKETAPTTPKKLTPTTPEKLAPTTpekPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 692
Cdd:pfam17823  321 GEPTPSPSNTTLEPNTPKSVASTN---LAVVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGI 397

                          330       340
                   ....*....|....*....|....*...
gi 735997426   693 PKEPAPTTPKETAPTTPKGTAPTTLKEP 720
Cdd:pfam17823  398 LLAPEQVATEATAGTASAGPTPRSSGDP 425

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

398-512

6.71e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 6.71e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  398 PTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkEPAPT 477
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-----------------------AAAAA 94

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 735997426  478 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTK 512
Cdd:PRK12270   95 APAAPPAAAAAAAPAAAAVEDEVTPLRGAAAAVAK 129

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

537-616

9.02e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.66 E-value: 9.02e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  537 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 616
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

384-450

9.15e-06

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 49.51 E-value: 9.15e-06

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426   384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT-PKKPAPTTPKE 450
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVPSS 142

PRK07994

DNA polymerase III subunits gamma and tau; Validated

475-638

1.07e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 49.86 E-value: 1.07e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  475 APTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTttkEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPsp 554
Cdd:PRK07994  367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPP---PPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKS-- 441

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  555 tttkEPAPTTPKEPAPTTPKKPAPTTP-KEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA 633
Cdd:PRK07994  442 ----EPAAASRARPVNSALERLASVRPaPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLA 517


                  ....*
gi 735997426  634 PTTPE 638
Cdd:PRK07994  518 AEAIE 522

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

673-779

1.18e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.81 E-value: 1.18e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  673 APNTPKEPAPTTPKEPAPTTPKePAPTTPKETAPTTPkgtAPTTLKEPAPTTPKKPAPKELAptttkeptsttsdkPAPT 752
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAAN---IPPKEPVRETATPPPVPPRPVA--------------PPVP 422

                          90       100
                  ....*....|....*....|....*....
gi 735997426  753 TPKGTAPTTPKE--PAPTTPKEPAPTTPK 779
Cdd:PRK14950  423 HTPESAPKLTRAaiPVDEKPKYTPPAPPK 451

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

405-521

1.28e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.81 E-value: 1.28e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  405 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkEPAPTTPKEPAP 484
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVR------------------------ETATPPPVPPRP 416

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 735997426  485 TAPKKPaptTPKEPAPTTPKE--PAPTTTKEPSPTTPKE 521
Cdd:PRK14950  417 VAPPVP---HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

671-732

1.67e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.50 E-value: 1.67e-05

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997426  671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 732
Cdd:PRK12270   45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA 106

PRK12323

DNA polymerase III subunit gamma/tau;

317-510

1.80e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.10 E-value: 1.80e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  317 SAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKeP 396
Cdd:PRK12323  378 AAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPA-A 456

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT-TPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPA 475
Cdd:PRK12323  457 APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPApADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDD 536

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 735997426  476 PTTPKEPAPTAPKKPAPTTPKEP--APTTPKEPAPTT 510
Cdd:PRK12323  537 AFETLAPAPAAAPAPRAAAATEPvvAPRPPRASASGL 573

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

681-788

1.82e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 1.82e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  681 APTTPKEPAPTTPKEPAPTTPKeTAPTTPKGTAPTTLKEPAPTTPKkPAPKElaptttkeptsttsdkPAPTTPKGTAPT 760
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRE-TATPP----------------PVPPRPVAPPVP 422

                          90       100       110
                  ....*....|....*....|....*....|
gi 735997426  761 TPKEPAPTTPKE--PAPTTPKGTAPTTLKE 788
Cdd:PRK14950  423 HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

515-591

1.95e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.50 E-value: 1.95e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997426  515 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPtttkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 591
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAA-----AAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

671-800

2.39e-05

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 48.22 E-value: 2.39e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:NF040712  200 ATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGE 279

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 735997426  751 PTTPKGTAPTTPKEPAPTTPKEPA-PTTPKGTAPTTLKEPAPTTPKKPAPK 800
Cdd:NF040712  280 PPAPGAAETPEAAEPPAPAPAAPAaPAAPEAEEPARPEPPPAPKPKRRRRR 330

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

705-801

2.42e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.12 E-value: 2.42e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  705 APTTPKGTAPTTLKEPAPTTPKKPapkelaptttkeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPT 784
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAA--------------------PAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPA 97

                          90
                  ....*....|....*..
gi 735997426  785 TLKEPAPTTPKKPAPKE 801
Cdd:PRK12270   98 APPAAAAAAAPAAAAVE 114

PRK07764

DNA polymerase III subunits gamma and tau; Validated

311-522

2.53e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.83 E-value: 2.53e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  311 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTtikSAPTTPKEPAPTTTKSAP 390
Cdd:PRK07764  572 TALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA---GAAAAPAEASAAPAPGVA 648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  391 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 470
Cdd:PRK07764  649 APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA 728

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 735997426  471 TKEPAPTTPKEPAPTAPKKP--APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 522
Cdd:PRK07764  729 SAPSPAADDPVPLPPEPDDPpdPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

372-444

3.10e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.73 E-value: 3.10e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997426  372 KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPA 444
Cdd:PRK12270   52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

748-843

3.52e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.73 E-value: 3.52e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  748 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkgptsttsdKPAPTTPKETA 827
Cdd:PRK12270   45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPA----------------APPAAAAAAAP 108

                          90
                  ....*....|....*.
gi 735997426  828 PTTPKEPAPTTPKKPA 843
Cdd:PRK12270  109 AAAAVEDEVTPLRGAA 124

rne

PRK10811

ribonuclease E; Reviewed

544-774

3.74e-05

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 48.50 E-value: 3.74e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  544 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTpkEPAPTTTKKPAPTTPKEPAPTTPKETApttpkk 623
Cdd:PRK10811  844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETT------ 915

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  624 ltptTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeepapttpKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKE 703
Cdd:PRK10811  916 ----HPEVIAAPVTEQPQVITESD----------------------VAVAQEVAEHAEPVVEPQDETADIEEAAETAEVV 969

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997426  704 TAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPApttpkgTAPTTpKEPAPTTPKEPA 774
Cdd:PRK10811  970 VAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHA------TAPMT-RAPAPEYVPEAP 1033

rne

PRK10811

ribonuclease E; Reviewed

473-646

3.87e-05

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 48.50 E-value: 3.87e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  473 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTpkEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Cdd:PRK10811  859 REAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDV 936

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  553 S--PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPaPTTPKETAPTTPKKLTPTTPE 630
Cdd:PRK10811  937 AvaQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETV-TAVEPEVAPAQVPEATVEHNH 1015

                         170
                  ....*....|....*..
gi 735997426  631 KLAPTTpEKPAPT-TPE 646
Cdd:PRK10811 1016 ATAPMT-RAPAPEyVPE 1031

PHA03247

large tegument protein UL36; Provisional

255-562

4.88e-05

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.40 E-value: 4.88e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  255 AKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPK 334
Cdd:PHA03247 2734 ALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA 2813

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  335 AETTTKGPALTTPKEPTPTTPKEPASttpkeptpttiksaPTTPKEPAPTTTKSAPTTPKepAPTTTKEPAPTTPKEPAp 414
Cdd:PHA03247 2814 PAAALPPAASPAGPLPPPTSAQPTAP--------------PPPPGPPPPSLPLGGSVAPG--GDVRRRPPSRSPAAKPA- 2876

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  415 TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTT 494
Cdd:PHA03247 2877 APARPPVRRLARPAVSRSTESFALPPDQPERPPQ-------------------------PQAPPPPQPQPQPPPPPQPQP 2931

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997426  495 PKEPAPTTPKEPAPTTTKEPSP-TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT--TPKEPSPTTTKEPAP 562
Cdd:PHA03247 2932 PPPPPPRPQPPLAPTTDPAGAGePSGAVPQPWLGALVPGRVAVPRFRVPQPAPSreAPASSTPPLTGHSLS 3002

PRK12323

DNA polymerase III subunit gamma/tau;

473-645

5.16e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.95 E-value: 5.16e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  473 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSpttPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Cdd:PRK12323  393 AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAA---ARQASARGPGGAPAPAPAPAAAPAAAARPAAAGP 469

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPaptTPKETAPTTPKKLTPTTPEKL 632
Cdd:PRK12323  470 RPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAES---IPDPATADPDDAFETLAPAPA 546

                         170
                  ....*....|...
gi 735997426  633 APTTPEKPAPTTP 645
Cdd:PRK12323  547 AAPAPRAAAATEP 559

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1151-1193

5.97e-05

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 41.84 E-value: 5.97e-05

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 735997426   1151 VDGLTTLRNGTLVAFRGHYFWMLSPFSP-PSPARRITEVW-GIPS 1193
Cdd:smart00120    1 IDAAFELRDGKTYFFKGDKYWRFDPKRVdPGYPKLISSFFpGLPC 45

PHA03378

EBNA-3B; Provisional

401-802

6.08e-05

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 47.75 E-value: 6.08e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  401 TKEPAPTtPKEPAPTTTKEPAPTTTKSAPTTP-KEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 479
Cdd:PHA03378  438 TEQPRAT-PHSQAPTVVLHRPPTQPLEGPTGPlSVQAPLEPWQPLPHPQVTPVILHQPPAQGVQAHGSMLDLLEKDDEDM 516

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  480 KEPAPTAPKKPAPTTPK--EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTpKEPSPTTT 557
Cdd:PHA03378  517 EQRVMATLLPPSPPQPRagRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLGPLQIQPLTSPTTSQLAS-SAPSYAQT 595

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  558 KEPAPTTPKEPAPTTPKKPAPTTP---KEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTpeklaP 634
Cdd:PHA03378  596 PWPVPHPSQTPEPPTTQSHIPETSaprQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQI-----G 670

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  635 TTPEKPAPTTPeelapttpeeptpttpeepAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAP 714
Cdd:PHA03378  671 HIPYQPSPTGA-------------------NTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAP 731

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  715 TTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKE----PAPTTPKGTAPTT--LKE 788
Cdd:PHA03378  732 GRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRprgaPTPQPPPQAGPTSmqLMP 811

                         410
                  ....*....|....
gi 735997426  789 PAPTTPKKPAPKEL 802
Cdd:PHA03378  812 RAAPGQQGPTKQIL 825

COG5373

Uncharacterized membrane protein [Function unknown];

388-450

6.16e-05

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 47.69 E-value: 6.16e-05

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997426  388 SAPTTPKEPAPtttkePAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:COG5373    42 EAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAA 99

PRK14948

DNA polymerase III subunit gamma/tau;

373-450

6.21e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 47.65 E-value: 6.21e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:PRK14948  516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593

PRK12323

DNA polymerase III subunit gamma/tau;

341-551

6.50e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.56 E-value: 6.50e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  341 GPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP 420
Cdd:PRK12323  373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  421 APTttkSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAP 500
Cdd:PRK12323  453 APA---AAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDP 529

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 735997426  501 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 551
Cdd:PRK12323  530 ATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGD 580

PHA03307

transcriptional regulator ICP4; Provisional

544-912

6.51e-05

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.86 E-value: 6.51e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  544 SAPTTPKEPSPTTTKEPAPTTPKEPAPTT------PKKPAPTT--PKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 615
Cdd:PHA03307   23 RPPATPGDAADDLLSGSQGQLVSDSAELAavtvvaGAAACDRFepPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAR 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  616 TAPTTPKKLTPTTPEKlAPTTPEKPAPTTPEELapTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 695
Cdd:PHA03307  103 EGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDL--SEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSP 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  696 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPApkelaptttkeptSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 775
Cdd:PHA03307  180 EETARAPSSPPAEPPPSTPPAAASPRPPRRSSPI-------------SASASSPAPAPGRSAADDAGASSSDSSSSESSG 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  776 TTPKGTAPTTLKEPAP-TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTT 854
Cdd:PHA03307  247 CGWGPENECPLPRPAPiTLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSS 326

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  855 SEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPK--EPGVPTTKTPAATKPEMT 912
Cdd:PHA03307  327 SSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRkrPRPSRAPSSPAASAGRPT 386

rne

PRK10811

ribonuclease E; Reviewed

500-689

7.00e-05

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 47.34 E-value: 7.00e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  500 PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPspTTTKEPAPTTPKEPAPTTPKKPAPT 579
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEP--VVVAEPQPEEVVVVETTHPEVIAAP 923

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  580 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTP 658
Cdd:PRK10811  924 VTEQPQVITESDVAVAQEVAEHAEPVVEPQDeTADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAP 1003

                         170       180       190
                  ....*....|....*....|....*....|.
gi 735997426  659 TTPEEPAPTTPKAAAPNTpKEPAPTTPKEPA 689
Cdd:PRK10811 1004 AQVPEATVEHNHATAPMT-RAPAPEYVPEAP 1033

PHA03369

capsid maturational protease; Provisional

498-792

7.68e-05

capsid maturational protease; Provisional

Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 47.30 E-value: 7.68e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  498 PAPTTPKEPAPTTTKEPSPTTPKEPAPtttksaptttkEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP- 576
Cdd:PHA03369  354 TAPSRVLAAAAKVAVIAAPQTHTGPAD-----------RQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPq 422

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  577 APTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE------KLAPTTPEKPAPTTPEELAP 650
Cdd:PHA03369  423 SPGTSYGPEPVGPVPPQPTNPYVMPISMANMVYPGHPQEHGHERKRKRGGELKEelietlKLVKKLKEEQESLAKELEAT 502

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  651 TTPEEPTPTTPEEPAPTTPKAAAPNTpkEPAPTTPkEPAPTTpKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKP-- 728
Cdd:PHA03369  503 AHKSEIKKIAESEFKNAGAKTAAANI--EPNCSAD-AAAPAT-KRARPETKTELEAVVRFPYQIRNMESPAFVHSFTStt 578

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  729 ----------APKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPT-TPKEPAPTTPKGTAPTTLKEPAPT 792
Cdd:PHA03369  579 laaaagqgsdTAEALAGAIETLLTQASAQPAGLSLPAPAVPVNASTPASTpPPLAPQEPPQPGTSAPSLETSLPQ 653

PRK07994

DNA polymerase III subunits gamma and tau; Validated

639-803

8.02e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 47.17 E-value: 8.02e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  639 KPAPTTPEelAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTP----KGTAP 714
Cdd:PRK07994  360 HPAAPLPE--PEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqraQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  715 TTLKEPAPTTPKKPAPKELAptttKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTP 794
Cdd:PRK07994  438 AKKSEPAAASRARPVNSALE----RLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELA 513


                  ....*....
gi 735997426  795 KKPAPKELA 803
Cdd:PRK07994  514 AKLAAEAIE 522

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

489-584

8.25e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 8.25e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  489 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 568
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAP-----------------AAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAP 99

                          90
                  ....*....|....*.
gi 735997426  569 APTTPKKPAPTTPKEP 584
Cdd:PRK12270  100 PAAAAAAAPAAAAVED 115

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

376-440

8.86e-05

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 46.43 E-value: 8.86e-05

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997426   376 TTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT-PKEPAPTTP 440
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVP 140

PHA03307

transcriptional regulator ICP4; Provisional

475-872

9.05e-05

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.09 E-value: 9.05e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  475 APTTPKEPAPTAPKKPAPTTPKEPAPTTpkEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT-KSAPTTPKEPS 553
Cdd:PHA03307   24 PPATPGDAADDLLSGSQGQLVSDSAELA--AVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTwSLSTLAPASPA 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  554 PTTTKEPAPTTPKEPAPTTPKKPAPttPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKkltpttpekla 633
Cdd:PHA03307  102 REGSPTPPGPSSPDPPPPTPPPASP--PPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAS----------- 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  634 PTTPEKPAPTTPEElapttpeeptpttpeepapttpkAAAPNTPKEPAPTTPkEPAPTTPKEPAPTTPKETAPTTPKGTA 713
Cdd:PHA03307  169 SRQAALPLSSPEET-----------------------ARAPSSPPAEPPPST-PPAAASPRPPRRSSPISASASSPAPAP 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  714 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPttpkGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPtT 793
Cdd:PHA03307  225 GRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAP----ITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSP-S 299

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  794 PKKPAPKELAPTTTK-----GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTT 868
Cdd:PHA03307  300 PSSPGSGPAPSSPRAsssssSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPA 379


                  ....
gi 735997426  869 IHKS 872
Cdd:PHA03307  380 ASAG 383

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

543-617

9.21e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 9.21e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  543 KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETA 617
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA 111

PRK07003

DNA polymerase III subunit gamma/tau;

322-578

9.56e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 9.56e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  322 APTSKVLAKPTPKAETttkgPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPA-PTT 400
Cdd:PRK07003  401 AVTGAAGAALAPKAAA----AAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPAdSGS 476

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  401 TKEPAPTTPkepaPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTtpkepapttpkeptpttpkepaptTKEPAPttPK 480
Cdd:PRK07003  477 ASAPASDAP----PDAAFEPAPRAAAPSAATPAAVPDARAPAAASR------------------------EDAPAA--AA 526

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  481 EPAPTAPkKPAPTTPKEPAPTTPKEPA-----PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 555
Cdd:PRK07003  527 PPAPEAR-PPTPAAAAPAARAGGAAAAldvlrNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAAT 605

                         250       260
                  ....*....|....*....|...
gi 735997426  556 TTKEPAPTTPKEPAPTTPKKPAP 578
Cdd:PRK07003  606 GDAPPNGAARAEQAAESRGAPPP 628

PRK10263

DNA translocase FtsK; Provisional

475-729

9.72e-05

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 47.00 E-value: 9.72e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  475 APTTPKEPAPtapkkPAPTTPKEPAPTT--------PKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 546
Cdd:PRK10263  335 APVEPVTQTP-----PVASVDVPPAQPTvawqpvpgPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYA 409

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  547 TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTP 626
Cdd:PRK10263  410 PAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPV 489

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  627 TTPEKLA-PTTPEKPAPTTPEELAPTTPEEPTPTTPEEPApttpkaaAPNTPKEPAPTTPKEPAPTTPKEPaPTTPKETA 705
Cdd:PRK10263  490 VEPEPVVeETKPARPPLYYFEEVEEKRAREREQLAAWYQP-------IPEPVKEPEPIKSSLKAPSVAAVP-PVEAAAAV 561

                         250       260
                  ....*....|....*....|....
gi 735997426  706 PTTPKGTAPTTLKEPAPTTPKKPA 729
Cdd:PRK10263  562 SPLASGVKKATLATGAAATVAAPV 585

PRK07994

DNA polymerase III subunits gamma and tau; Validated

404-578

1.19e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.40 E-value: 1.19e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  404 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepaPTTKEPAPTTPKEPA 483
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPAS--------------------APQQAPAVPLPETTS 420

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  484 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT-----TPKEPAPTTtkSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Cdd:PRK07994  421 QLLAARQQLQRAQGATKAKKSEPAAASRARPVNSalerlASVRPAPSA--LEKAPAKKEAYRWKATNPVEVKKEPVATPK 498

                         170       180
                  ....*....|....*....|
gi 735997426  559 EPAPTTPKEPAPTTPKKPAP 578
Cdd:PRK07994  499 ALKKALEHEKTPELAAKLAA 518

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

392-488

1.21e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.81 E-value: 1.21e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  392 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepaPTT 471
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAP-------------------AAP 99

                          90
                  ....*....|....*..
gi 735997426  472 KEPAPTTPKEPAPTAPK 488
Cdd:PRK12270  100 PAAAAAAAPAAAAVEDE 116

rne

PRK10811

ribonuclease E; Reviewed

374-561

1.33e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 46.57 E-value: 1.33e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  374 APTTPKEPAPTTTKSAPTTpkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTpKEPAPTTPkkpapttpkepap 453
Cdd:PRK10811  870 VAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVT-EQPQVITE------------- 933

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  454 ttpkeptpTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA-PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 532
Cdd:PRK10811  934 --------SDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAePEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005

                         170       180
                  ....*....|....*....|....*....
gi 735997426  533 TTKEPAPTTTKSAPTTpKEPSPTTTKEPA 561
Cdd:PRK10811 1006 VPEATVEHNHATAPMT-RAPAPEYVPEAP 1033

PRK07994

DNA polymerase III subunits gamma and tau; Validated

560-734

1.37e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.40 E-value: 1.37e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  560 PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 639
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  640 PAPTTPEElapttpeePTPTTPEEPAPTTPKAAAPNTPKEPApttPKEPAPTTPKEPAPTtpKETAPTTPKGTAPTTLKE 719
Cdd:PRK07994  441 SEPAAASR--------ARPVNSALERLASVRPAPSALEKAPA---KKEAYRWKATNPVEV--KKEPVATPKALKKALEHE 507

                         170
                  ....*....|....*
gi 735997426  720 PAPTTPKKPAPKELA 734
Cdd:PRK07994  508 KTPELAAKLAAEAIE 522

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

427-554

1.52e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.25 E-value: 1.52e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  427 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 506
Cdd:PRK14951  368 AAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVAL 447

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 735997426  507 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSP 554
Cdd:PRK14951  448 APAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

472-589

1.65e-04

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 43.12 E-value: 1.65e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   472 KEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPaptttksaptttkepaptttksAPTTPKE 551
Cdd:pfam02389   28 KVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVP----------------------EPCSPKV 85

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 735997426   552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:pfam02389   86 PEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

677-842

1.91e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 45.69 E-value: 1.91e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  677 PKEPAPTTPKEPAPTTPKEP-APTTPKETAPTTPKGTA--------------PTTLKEPAPTTPKKPAPKEL-------- 733
Cdd:PLN03209  330 PKESDAADGPKPVPTKPVTPeAPSPPIEEEPPQPKAVVprplspytayedlkPPTSPIPTPPSSSPASSKSVdavakpae 409

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  734 --APTTTKEPTSTTSDKPAPTTPKGTAPTTP--KEPAPTTPKEPAPTTPKGTAPTTLKEPA-PTTPKKPAPKELAPTTTK 808
Cdd:PLN03209  410 pdVVPSPGSASNVPEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSSTSSvPAVPDTAPATAATDAAAP 489

                         170       180       190
                  ....*....|....*....|....*....|....
gi 735997426  809 GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKP 842
Cdd:PLN03209  490 PPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAP 523

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

750-843

1.93e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.96 E-value: 1.93e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  750 APTTPKGTAPTTPKEPAPTTPKePAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkGPTSTTSDKPAPTTPKETAPT 829
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATP---------PPVPPRPVAPPVPHTPESAPK 430

                          90
                  ....*....|....*.
gi 735997426  830 TPKE--PAPTTPKKPA 843
Cdd:PRK14950  431 LTRAaiPVDEKPKYTP 446

PRK14948

DNA polymerase III subunit gamma/tau;

409-576

1.95e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.72 E-value: 1.95e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  409 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptPTTPKEPAPTTKEPAPTTPKEPAPTAPK 488
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT------------TPSPPPAKASPPIPVPAEPTEPSPTPPA 430

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  489 KPAPTTPKE----------------------------------------------------------------------- 497
Cdd:PRK14948  431 NAANAPPSLnleelwqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnl 510

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  498 -----PAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 572
Cdd:PRK14948  511 esqsgSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTK 590


                  ....
gi 735997426  573 PKKP 576
Cdd:PRK14948  591 DSSP 594

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

483-589

1.97e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.86 E-value: 1.97e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  483 APTAPKKPAPTTPKEPAPTTP-KEPAPTTTKEPSPTTPkEPAPTTTKSAPTTTKEPAPTTtkSAPTTPKEPSPTTTKEPA 561
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPAAA-PAAAASAPAAPPAAAPPAPVA--APAAAAPAAAPAAAPAAV 445

                          90       100
                  ....*....|....*....|....*...
gi 735997426  562 PTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:PRK14951  446 ALAPAPPAQAAPETVAIPVRVAPEPAVA 473

PRK07003

DNA polymerase III subunit gamma/tau;

567-828

2.00e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 46.00 E-value: 2.00e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  567 EPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPE 646
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  647 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTP----KEPAPT---TPKETAPTTPKGTAPTTLKE 719
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPpdaaFEPAPRaaaPSAATPAAVPDARAPAAASR 518

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  720 P-APTTPKKPAPKELAPTTTKEPTSTTSDKPAP------------TTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTtl 786
Cdd:PRK07003  519 EdAPAAAAPPAPEARPPTPAAAAPAARAGGAAAaldvlrnagmrvSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQV-- 596

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 735997426  787 kepapTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAP 828
Cdd:PRK07003  597 -----PTPRARAATGDAPPNGAARAEQAAESRGAPPPWEDIP 633

PRK14948

DNA polymerase III subunit gamma/tau;

373-552

2.05e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.72 E-value: 2.05e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPkEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT----- 447
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT-TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnleel 444

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  448 --------------------------------------------PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPA 483
Cdd:PRK14948  445 wqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAFAKVLGRSIKLNLESQSGSASNTAKTP 524

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997426  484 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Cdd:PRK14948  525 PPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593

PRK12323

DNA polymerase III subunit gamma/tau;

613-839

2.08e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.64 E-value: 2.08e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  613 PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 692
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  693 PKEPAPTTPKETAPTTPkgtapttlkePAPTTPKKPAPKELAPTTtkeptsttsdKPAPTTPKgtapttPKEPAPTTPKE 772
Cdd:PRK12323  455 AAAPAAAARPAAAGPRP----------VAAAAAAAPARAAPAAAP----------APADDDPP------PWEELPPEFAS 508

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997426  773 PAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKEtAPTTPKEPAPTTP 839
Cdd:PRK12323  509 PAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVV-APRPPRASASGLP 574

PHA03307

transcriptional regulator ICP4; Provisional

320-573

2.37e-04

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.93 E-value: 2.37e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  320 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPT 399
Cdd:PHA03307   69 TGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPP 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  400 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepAPTTPKEPTPTTPKEPAPTTKEPAPTTP 479
Cdd:PHA03307  149 AASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPST---PPAAASPRPPRRSSPISASASSPAPAPG 225

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  480 KEPAPTAPKKPAPTTPKEPAPTTPKEpaptTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPtttkE 559
Cdd:PHA03307  226 RSAADDAGASSSDSSSSESSGCGWGP----ENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSP----S 297

                         250
                  ....*....|....
gi 735997426  560 PAPTTPKEPAPTTP 573
Cdd:PHA03307  298 PSPSSPGSGPAPSS 311

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

765-858

2.54e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.65 E-value: 2.54e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  765 PAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAptttkgptsttsdKPAPTTPKETAPTTPKEPAPTTPKKPAP 844
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPA-------------AAAPAAPPKPAAAAAAAAAPAAPPAAAA 104

                          90
                  ....*....|....
gi 735997426  845 TTPETPPPTTSEVS 858
Cdd:PRK12270  105 AAAPAAAAVEDEVT 118

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

713-833

2.61e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.57 E-value: 2.61e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  713 APTTLKEPAPTTPKKPAPKelaptttkeptsttSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKgtapttlkePAPT 792
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPV--------------RPTPAPSTRPKAAAAANIPPKEPVRETATPPPVP---------PRPV 417

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 735997426  793 TPKKPAPKELAPTTTKGPTsttsdkPAPTTPKETAPTTPKE 833
Cdd:PRK14950  418 APPVPHTPESAPKLTRAAI------PVDEKPKYTPPAPPKE 452

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

482-583

2.64e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 45.23 E-value: 2.64e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  482 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKsapttPKEPSPTTTKEPA 561
Cdd:COG3266   265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAK-----PVVTETAAPAAPA 339

                          90       100
                  ....*....|....*....|...
gi 735997426  562 P-TTPKEPAPTTPKKPAPTTPKE 583
Cdd:COG3266   340 PeAAAAAAAPAAPAVAKKLAADE 362

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

384-799

2.69e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 45.68 E-value: 2.69e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPT-TPKEPAPTTPKEPTPT 462
Cdd:pfam05109  413 TTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSpTPAGTTSGASPVTPSP 492

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   463 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTtPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKePAPTTT 542
Cdd:pfam05109  493 SPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPT-PNATSPTLGKTSPTSAVTTPTPNATSPTPAVTT-PTPNAT 570

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   543 KSAPTTPKEPSPTTTKEPAPTTP----KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKepapttpkeTAP 618
Cdd:pfam05109  571 IPTLGKTSPTSAVTTPTPNATSPtvgeTSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITS---------SST 641

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   619 TTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 698
Cdd:pfam05109  642 SSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTSTKP 721

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   699 TTPKETAPTTPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPA 774
Cdd:pfam05109  722 GEVNVTKGTPPKNAtspqAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTTDYGGDSTTPRTRYNATTYLPP 801

                          410       420
                   ....*....|....*....|....*
gi 735997426   775 PTTPKGTAPTTLKEPAPTTPKKPAP 799
Cdd:pfam05109  802 STSSKLRPRWTFTSPPVTTAQATVP 826

PRK07994

DNA polymerase III subunits gamma and tau; Validated

498-648

2.83e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.24 E-value: 2.83e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  498 PAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTtksAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 577
Cdd:PRK07994  366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQ---APAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997426  578 PTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA--------PTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEEL 648
Cdd:PRK07994  443 PAAASRARPVNSALERLASVRPAPSALEKAPAkkeayrwkATNPVEVKKEPVATPKALKKALEHEKTPELAAKLAAEAI 521

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

473-589

2.96e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.76 E-value: 2.96e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  473 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkePAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT-PKE 551
Cdd:NF040712  208 EPADARPEEVEPAPAAEGAPATDSDPAEAGT--PDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPaPGA 285

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 735997426  552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Cdd:NF040712  286 AETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323

PRK14948

DNA polymerase III subunit gamma/tau;

388-560

2.98e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.34 E-value: 2.98e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  388 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP 467
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPP-----PAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  468 APT------TKEPAPTT-------------------------------------------------------PKEPAPTA 486
Cdd:PRK14948  441 LEElwqqilAKLELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997426  487 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 560
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

415-523

3.17e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.19 E-value: 3.17e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  415 TTTKEPAPTTtksAPTTPKEPAPTTPkKPAPTTPkepapttpkeptpttpkepaPTTKEPAPTTPKEPAP-TAPKKPAPT 493
Cdd:PRK14950  359 LLVPVPAPQP---AKPTAAAPSPVRP-TPAPSTR--------------------PKAAAAANIPPKEPVReTATPPPVPP 414

                          90       100       110
                  ....*....|....*....|....*....|..
gi 735997426  494 TPKEPAPTTPKEPAPTTTKE--PSPTTPKEPA 523
Cdd:PRK14950  415 RPVAPPVPHTPESAPKLTRAaiPVDEKPKYTP 446

PRK07994

DNA polymerase III subunits gamma and tau; Validated

688-893

3.19e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.24 E-value: 3.19e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  688 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAP 767
Cdd:PRK07994  366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAA 445

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  768 TTPKEPAPTTPKGTAPttlKEPAPTTPKKPAPKELAPTTtkgptsttsDKPAPTTPKETAPTTPKEPapttpkKPAPTTp 847
Cdd:PRK07994  446 ASRARPVNSALERLAS---VRPAPSALEKAPAKKEAYRW---------KATNPVEVKKEPVATPKAL------KKALEH- 506

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 735997426  848 etpppttsevstptttkepttihkspdESTPELSAEPTPKALENSP 893
Cdd:PRK07994  507 ---------------------------EKTPELAAKLAAEAIERDP 525

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

394-703

3.36e-04

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 45.45 E-value: 3.36e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  394 KEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSApTTPKEPapttpKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKE 473
Cdd:PTZ00449  506 KHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKES-DEPKEG-----GKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKP 579

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  474 PAPTTPKepAPTAPKKP----APTTPKEP-APTTPKEPA----PTTTKEP-SPTTPKEPAPTTTKSAPTTTKEPAPTTTK 543
Cdd:PTZ00449  580 EFPKDPK--HPKDPEEPkkpkRPRSAQRPtRPKSPKLPElldiPKSPKRPeSPKSPKRPPPPQRPSSPERPEGPKIIKSP 657

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  544 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA--PTTPKETapttp 621
Cdd:PTZ00449  658 KPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPklPRDEEFP----- 732

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  622 kklTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKA----AAPNTPKEPA--PTTPKEPAPTTPKE 695
Cdd:PTZ00449  733 ---FEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEedihAETGEPDEAMkrPDSPSEHEDKPPGD 809


                  ....*...
gi 735997426  696 pAPTTPKE 703
Cdd:PTZ00449  810 -HPSLPKK 816

DUF4045

pfam13254

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...

427-590

3.53e-04

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.

Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 44.77 E-value: 3.53e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   427 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 506
Cdd:pfam13254  195 GRPNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPPPKTKELPKDSEEP 274

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   507 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPttpkEPAPTTPKKP--APTTPKEP 584
Cdd:pfam13254  275 AAPSKSAEASTEKKEPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSP----KPKPQSPPKDfrANLRSREV 350


                   ....*.
gi 735997426   585 APTTPK 590
Cdd:pfam13254  351 PKDKSK 356

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

639-734

4.04e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 4.04e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  639 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlk 718
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV--- 113

                          90
                  ....*....|....*.
gi 735997426  719 ePAPTTPKKPAPKELA 734
Cdd:PRK12270  114 -EDEVTPLRGAAAAVA 128

PRK10263

DNA translocase FtsK; Provisional

397-610

4.05e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.08 E-value: 4.05e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  397 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTtPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 476
Cdd:PRK10263  324 AAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQ 402

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  477 TTPKEPAPTAPKK-------PAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP-APTTTKSAPTTTKEPAPTTTKSAPTT 548
Cdd:PRK10263  403 PQQPYYAPAAEQPaqqpyyaPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTfAPQSTYQTEQTYQQPAAQEPLYQQPQ 482

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  549 PKEPSPTttKEPAPTTpKEPAPTTPK----------------------KPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPK 606
Cdd:PRK10263  483 PVEQQPV--VEPEPVV-EETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAA 559


                  ....
gi 735997426  607 EPAP 610
Cdd:PRK10263  560 AVSP 563

PRK07003

DNA polymerase III subunit gamma/tau;

536-798

4.29e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.84 E-value: 4.29e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  536 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA--------PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKE 607
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGasavpavtAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  608 PAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 687
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASR 518

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  688 P-APTTPKEPAPttpkETAPTTPKGTAPttlkePAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKePA 766
Cdd:PRK07003  519 EdAPAAAAPPAP----EARPPTPAAAAP-----AARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPK-PA 588

                         250       260       270
                  ....*....|....*....|....*....|..
gi 735997426  767 PTTPKEPAPtTPKGTAPTTLKEPAPTTPKKPA 798
Cdd:PRK07003  589 APRVAVQVP-TPRARAATGDAPPNGAARAEQA 619

PRK12323

DNA polymerase III subunit gamma/tau;

306-503

4.36e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 4.36e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  306 SAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTT 385
Cdd:PRK12323  379 AAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAP 458

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  386 TKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkePAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 465
Cdd:PRK12323  459 AAAARPAAAGPRPVAAAAAAAPARAAPAAAPA--PADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDD 536

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 735997426  466 EPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 503
Cdd:PRK12323  537 AFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

630-911

4.37e-04

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 45.07 E-value: 4.37e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  630 EKLAPTTPEKP-----APTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTP----KEPAPTTPKEPAPTT 700
Cdd:PTZ00449  494 KKLAPIEEEDSdkhdePPEGPEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEgevgKKPGPAKEHKPSKIP 573

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  701 PKETAPTTPKgtAPTTLKEP-APTTPKKPAPKELAPTTTKEPTSTTSDKPApTTPKGTAPTTPKEP-APTTPKEPA-PTT 777
Cdd:PTZ00449  574 TLSKKPEFPK--DPKHPKDPeEPKKPKRPRSAQRPTRPKSPKLPELLDIPK-SPKRPESPKSPKRPpPPQRPSSPErPEG 650

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  778 PKgtAPTTLKEP-APTTPKKPAPKE--------LAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPA----------PTT 838
Cdd:PTZ00449  651 PK--IIKSPKPPkSPKPPFDPKFKEkfyddyldAAAKSKETKTTVVLDESFESILKETLPETPGTPFttprplppklPRD 728

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  839 PKKPAPTTPETPPPTTSEVSTPTTTKEPTT-IHKSPDES-----TPELSAEPTPKALENSPKE----PGVPT--TKTPAA 906
Cdd:PTZ00449  729 EEFPFEPIGDPDAEQPDDIEFFTPPEEERTfFHETPADTplpdiLAEEFKEEDIHAETGEPDEamkrPDSPSehEDKPPG 808


                  ....*
gi 735997426  907 TKPEM 911
Cdd:PTZ00449  809 DHPSL 813

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

402-522

4.46e-04

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 41.96 E-value: 4.46e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   402 KEPAPTTPKEPAPTTTKEPAPTTTKSaPTTPKEPAPTTPKKPAPTTPKepapttpKEPTPTTPKEPAPTTKEPAPTTPKE 481
Cdd:pfam02389    6 KQPCQPPPQEPCVPTTKEPCHSKVPE-PCNPKVPEPCCPKVPEPCCPK-------VPEPCCPKVPEPCCPKVPEPCYPKV 77

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 735997426   482 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 522
Cdd:pfam02389   78 PEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVP 118

PRK12323

DNA polymerase III subunit gamma/tau;

749-910

4.48e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 4.48e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  749 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTtPKKPAPKELAPTTTKGPTSTTSDK-PAPTTPKETA 827
Cdd:PRK12323  381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPA-RRSPAPEALAAARQASARGPGGAPaPAPAPAAAPA 459

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  828 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEpttihksPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 907
Cdd:PRK12323  460 AAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPP-------PWEELPPEFASPAPAQPDAAPAGWVAESIPDPATA 532


                  ...
gi 735997426  908 KPE 910
Cdd:PRK12323  533 DPD 535

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

474-567

4.50e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.80 E-value: 4.50e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  474 PAPTTPKePAPTAPKKPAPTTPKEPAPTTPkEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKE-- 551
Cdd:PRK14950  376 PSPVRPT-PAPSTRPKAAAAANIPPKEPVR-ETATPPPVPPRPVAP-----------------PVPHTPESAPKLTRAai 436

                          90
                  ....*....|....*.
gi 735997426  552 PSPTTTKEPAPTTPKE 567
Cdd:PRK14950  437 PVDEKPKYTPPAPPKE 452

PRK12323

DNA polymerase III subunit gamma/tau;

544-762

4.59e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 4.59e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  544 SAPTTPKE-PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPkepaptttkkpAPTTPKEPAPTTPKETAPTTPK 622
Cdd:PRK12323  372 AGPATAAAaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARA-----------VAAAPARRSPAPEALAAARQAS 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  623 KLTPTTPEKLAPTTPEKPAPTTPEelAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP--TTPKEPAPTTPKEPAPT- 699
Cdd:PRK12323  441 ARGPGGAPAPAPAPAAAPAAAARP--AAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPweELPPEFASPAPAQPDAAp 518

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997426  700 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPtsttsdkPAPTTPKGTAPTTP 762
Cdd:PRK12323  519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV-------VAPRPPRASASGLP 574

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

359-432

5.86e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 5.86e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997426  359 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP 432
Cdd:PRK12270   46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

491-589

5.88e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.07 E-value: 5.88e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  491 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPkEPSPTTTKEPAPTTPKEPAP 570
Cdd:COG3266   254 ALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAA-APAEAAAPQPTAAKPVVTET 332

                          90       100
                  ....*....|....*....|
gi 735997426  571 TTPKKPAP-TTPKEPAPTTP 589
Cdd:COG3266   333 AAPAAPAPeAAAAAAAPAAP 352

rne

PRK10811

ribonuclease E; Reviewed

671-839

6.10e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 44.26 E-value: 6.10e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPkgTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:PRK10811  851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVE--AVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQP 928

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  751 PTTPKGTAPTtpkepAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTtsdkPAPTTPKETAPTT 830
Cdd:PRK10811  929 QVITESDVAV-----AQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAE----VAAEVETVTAVEP 999


                  ....*....
gi 735997426  831 PKEPAPTTP 839
Cdd:PRK10811 1000 EVAPAQVPE 1008

rne

PRK10811

ribonuclease E; Reviewed

671-843

6.59e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 44.26 E-value: 6.59e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  671 AAAPNTPKEPAPTTpkEPAPTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPtttkeptsttsdkp 749
Cdd:PRK10811  875 VAAAVEPVVSAPVV--EAVAEVVEEPVVVAePQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAV-------------- 938

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  750 APTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKE--TA 827
Cdd:PRK10811  939 AQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNhaTA 1018

                         170
                  ....*....|....*.
gi 735997426  828 PTTpKEPAPTTPKKPA 843
Cdd:PRK10811 1019 PMT-RAPAPEYVPEAP 1033

PRK12323

DNA polymerase III subunit gamma/tau;

696-922

6.68e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.10 E-value: 6.68e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  696 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkeptsttsdKPAPTTPKGTAPTTPKEPAPTTPKEPAP 775
Cdd:PRK12323  374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAA-----------------APAAAAAARAVAAAPARRSPAPEALAAA 436

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  776 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTttkgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTS 855
Cdd:PRK12323  437 RQASARGPGGAPAPAPAPAAAPAAAARPAA------------AGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPP 504

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  856 EVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEP-GVPTTKTPAATKPEMTTTAKDKTTER 922
Cdd:PRK12323  505 EFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPaAAPAPRAAAATEPVVAPRPPRASASG 572

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

377-519

7.27e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 7.27e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  377 TPKEPAPTTTKSAPTTPkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT--PKEPAPTTPKKPAPTTPKEPAPT 454
Cdd:NF040712  191 DFGRPLRPLATVPRLAR-EPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  455 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 519
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

COG5373

Uncharacterized membrane protein [Function unknown];

373-441

7.70e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 44.22 E-value: 7.70e-04

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997426  373 SAPTTPKEPAPtttkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkEPAPTTTKSAPTTPKEPAPTTPK 441
Cdd:COG5373    42 EAASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAPPAAAE-APAPAAAAPPAEAEPAAAPAAAS 105

PRK07994

DNA polymerase III subunits gamma and tau; Validated

536-698

7.99e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.70 E-value: 7.99e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  536 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 615
Cdd:PRK07994  363 APLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  616 TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 695
Cdd:PRK07994  443 PAAASRARPVNSALERLASVRPAPSALEKAPA---------------KKEAYRWKATNPVEVKKEPVATPKALKKALEHE 507


                  ...
gi 735997426  696 PAP 698
Cdd:PRK07994  508 KTP 510

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

426-523

8.08e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 8.08e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  426 KSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 505
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPA-------------------------AAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAA 91

                          90
                  ....*....|....*...
gi 735997426  506 PAPTTTKEPSPTTPKEPA 523
Cdd:PRK12270   92 AAAAPAAPPAAAAAAAPA 109

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

545-647

8.11e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.64 E-value: 8.11e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  545 APTTPKEPSPTTTKEPAPTTPKePAPTTPKKPAPTTPKEPAP----TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPtt 620
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEpvreTATPPPVPPRPVAPPVPHTPESAPKLTRAAIP-- 437

                          90       100
                  ....*....|....*....|....*..
gi 735997426  621 pkkltpttpeklAPTTPEKPAPTTPEE 647
Cdd:PRK14950  438 ------------VDEKPKYTPPAPPKE 452

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

428-559

8.54e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.64 E-value: 8.54e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  428 APTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkePAPTTPKEPAPTAPkkpAPTTPKEPAPTTPKEPA 507
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT------------------------PAPSTRPKAAAAAN---IPPKEPVRETATPPPVP 413

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 735997426  508 PTTTKEPSPTTPKEPaptttksaptttkEPAPTTTKSAPTTPKEPSPTTTKE 559
Cdd:PRK14950  414 PRPVAPPVPHTPESA-------------PKLTRAAIPVDEKPKYTPPAPPKE 452

PRK14948

DNA polymerase III subunit gamma/tau;

371-443

9.02e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 43.80 E-value: 9.02e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997426  371 IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP 443
Cdd:PRK14948  522 KTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

PRK07764

DNA polymerase III subunits gamma and tau; Validated

671-785

9.06e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.82 E-value: 9.06e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  671 AAAPNTPKEPAPTTPKEPAPT---TPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSD 747
Cdd:PRK07764  387 VAGGAGAPAAAAPSAAAAAPAaapAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQP 466

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 735997426  748 KPAPTTPkgTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 785
Cdd:PRK07764  467 APAPAAA--PEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

486-613

9.80e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 9.80e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  486 APKKPAPTTPKEPAPTTPKEPAPtttkEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 565
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPAA----APVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 735997426  566 KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTP 613
Cdd:PRK14951  445 VALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

372-500

1.08e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 1.08e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  372 KSAPTTPKE----PAPTTTKSAPTTPKEPAPTTTkePAPTTPKEPAPtttkepaptttkSAPTTPKEPAPTTPKKPAPTT 447
Cdd:PRK14951  378 KKTPARPEAaapaAAPVAQAAAAPAPAAAPAAAA--SAPAAPPAAAP------------PAPVAAPAAAAPAAAPAAAPA 443

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 735997426  448 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPkKPAPTTPKEPAP 500
Cdd:PRK14951  444 AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP-AAARLTPTEEGD 495

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

378-508

1.08e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 40.81 E-value: 1.08e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   378 PKEPAPTTTKSaPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSA-PTTPKEPAPTTPKKPAPTTPkepapttp 456
Cdd:pfam02389   13 PQEPCVPTTKE-PCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPePCCPKVPEPCYPKVPEPCSP-------- 83

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 735997426   457 keptpttpkepapttKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 508
Cdd:pfam02389   84 ---------------KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

383-519

1.16e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.83 E-value: 1.16e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  383 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPT 462
Cdd:NF040712  190 PDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 735997426  463 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTtpkEPAPTTPKEPAPTTTKEPSPTTP 519
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPA---APAAPAAPEAEEPARPEPPPAPK 323

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

305-584

1.16e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.41 E-value: 1.16e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   305 TSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPA-----LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 379
Cdd:pfam17823   97 LSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAalpseAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPR 176

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   380 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTT----TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTT 455
Cdd:pfam17823  177 TAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHpaagTALAAVGNSSPAAGTVTAAVGTVTPAALATL 256

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   456 PKEPTPTTPKEPAPTTKEPAPTTPKE----PAPTAPKKPAPTTPKEPAPTTPK----EPAPTTTKEPSPTTPKEPAPTTT 527
Cdd:pfam17823  257 AAAAGTVASAAGTINMGDPHARRLSPakhmPSDTMARNPAAPMGAQAQGPIIQvstdQPVHNTAGEPTPSPSNTTLEPNT 336

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426   528 KSAPTTTKEPAPTTTKSA---PTTPKEPSPTTTKEP-----APTTPKEPAPTTPKKPAPTTPKEP 584
Cdd:pfam17823  337 PKSVASTNLAVVTTTKAQakePSASPVPVLHTSMIPeveatSPTTQPSPLLPTQGAAGPGILLAP 401

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

475-542

1.25e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.96 E-value: 1.25e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426   475 APTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT 542
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPP--ASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAA 147

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

509-878

1.27e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.22 E-value: 1.27e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  509 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPkepAPTTPKKPAPTTPKEPAPTT 588
Cdd:NF033839  119 STSKSQLQKLMMESQSKVDEAVSKFEKDSSSSSSSGSSTKPETPQPENPEHQKPTTP---APDTKPSPQPEGKKPSVPDI 195

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  589 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTT 668
Cdd:NF033839  196 NQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKF 275

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  669 PKAAAPNTPKEP------APTTPKEPAPTTPKEPAPTTPKETAP-TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 741
Cdd:NF033839  276 KKGLTQDTPKEPgnkkpsAPKPGMQPSPQPEKKEVKPEPETPKPeVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  742 TSTTSDKPApTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK-KPAPKELAPTTTKGPTSTTSD-KPA 819
Cdd:NF033839  356 PQPEKPKPE-VKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEvKPQ 434

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997426  820 PTTPK---ETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTP 878
Cdd:NF033839  435 PEKPKpevKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKP 496

PRK07994

DNA polymerase III subunits gamma and tau; Validated

748-923

1.32e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 1.32e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  748 KPAPTTPKGTAPTTPKEPAPTtpkEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETA 827
Cdd:PRK07994  360 HPAAPLPEPEVPPQSAAPAAS---AQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGAT 436

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  828 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHkSPDESTPELSAEP---TPKALENSPKEPgvpttKTp 904
Cdd:PRK07994  437 KAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAY-RWKATNPVEVKKEpvaTPKALKKALEHE-----KT- 509

                         170
                  ....*....|....*....
gi 735997426  905 aatkPEMTTTAKDKTTERD 923
Cdd:PRK07994  510 ----PELAAKLAAEAIERD 524

PRK14971

DNA polymerase III subunit gamma/tau;

671-779

1.35e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 43.23 E-value: 1.35e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  671 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTlkEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 750
Cdd:PRK14971  387 AAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPP--AAVPVNPPSTAPQAVRPAQFKEEKKIPVSKVS 464

                          90       100
                  ....*....|....*....|....*....
gi 735997426  751 PTTPKGTAPTTPKEPAPTTPKEPAPTTPK 779
Cdd:PRK14971  465 SLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

PHA03378

EBNA-3B; Provisional

374-589

1.39e-03

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 43.13 E-value: 1.39e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  374 APTTPKEPAPTTTKSAPTTPKE-PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTksaPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:PHA03378  650 TPHQPPQVEITPYKPTWTQIGHiPYQPSPTGANTMLPIQWAPGTMQPPPRAPT---PMRPPAAPPGRAQRPAAATGRARP 726

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  453 PTTPKEPTPTTPKEpapttkePAPTTPKEPAPTAPKKPAPT-TPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAP 531
Cdd:PHA03378  727 PAAAPGRARPPAAA-------PGRARPPAAAPGRARPPAAApGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPP 799

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  532 TTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTpKKPAPTTPKEPAPTTP 589
Cdd:PHA03378  800 PQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSL-KKPAALERQAAAGPTP 856

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

674-799

1.41e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 40.42 E-value: 1.41e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   674 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkeptsTTSDKPAPTT 753
Cdd:pfam02389    8 PCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEP-------------CCPKVPEPCY 74

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 735997426   754 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAP 799
Cdd:pfam02389   75 PKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

311-450

1.46e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.91 E-value: 1.46e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  311 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPAlTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP 390
Cdd:COG3266   236 AAEVLTARLVLLLLIIGSALKAPSQASSASAPA-TTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAP 314

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  391 TTPKEPAPTTTKepapttPKEPAPTTTKEPAPTTTKSApttpkePAPTTPKKPAPTTPKE 450
Cdd:COG3266   315 AEAAAPQPTAAK------PVVTETAAPAAPAPEAAAAA------AAPAAPAVAKKLAADE 362

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

639-780

1.50e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.78 E-value: 1.50e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  639 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPT-TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTL 717
Cdd:PRK14951  365 KPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997426  718 KEPAPTTPKKPAPKELAPtttkeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKG 780
Cdd:PRK14951  445 VALAPAPPAQAAPETVAI-------------PVRVAPEPAVASAAPAPAAAPAAARLTPTEEG 494

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

326-572

1.59e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.83 E-value: 1.59e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  326 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP-APTTTKEP 404
Cdd:NF033839  277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLeTPKPEVKP 356

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  405 APTTPKEPAPTTTKEPAPTTtKSAPTTPK---EPAPTTPK---KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Cdd:NF033839  357 QPEKPKPEVKPQPEKPKPEV-KPQPETPKpevKPQPEKPKpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 435

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  479 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Cdd:NF033839  436 EKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTN 515

                         250
                  ....*....|....
gi 735997426  559 EPAPTTPKEPAPTT 572
Cdd:NF033839  516 EKATNKPKKSLPST 529

TALPID3

pfam15324

Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ...

488-719

1.69e-03

Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.

Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 42.95 E-value: 1.69e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   488 KKPAPTTPKEPAPTTPKE---PAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 564
Cdd:pfam15324  964 QREPPVAASVPGDLPTKEtllPTPVPTPQPTPPCSPPSPLKEPSPVKTPDSSPCVSEHDFFPVKEIPPEKGADTGPAVSL 1043

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   565 PKEPAPTtpkkPAPTTPKEPAPTTPkepapTTTKKPAPTTPKEPAPTTPKETAPttpkkltpttpeklAPTTPEKPAPTT 644
Cdd:pfam15324 1044 VITPTVT----PIATPPPAATPTPP-----LSENSIDKLKSPSPELPKPWEDSD--------------LPLEEENPNSEQ 1100

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426   645 PEelapttPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKepaPTTPKEPAPTTPKETAPTTPKGTAPTTLKE 719
Cdd:pfam15324 1101 EE------LHPRAVVMSVARDEEPESVVLPASPPEPKPLAPP---PLGAAPPSPPQSPSSSSSTLESSSSLTVTE 1166

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

565-840

1.73e-03

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 42.61 E-value: 1.73e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  565 PKEPAPTTPKKPAPTTPKEPAPTTPKEPAptttkkpapttpkepapTTPKETAPTTPKKLTPTTPEKLAPttpekpaPTT 644
Cdd:PLN03209  330 PKESDAADGPKPVPTKPVTPEAPSPPIEE-----------------EPPQPKAVVPRPLSPYTAYEDLKP-------PTS 385

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  645 PeelapttpeepTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTP-KEPAPTTPKETAPTTPKgTAPTTLKEPAPT 723
Cdd:PLN03209  386 P-----------IPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSASNVPeVEPAQVEAKKTRPLSPY-ARYEDLKPPTSP 453

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  724 TPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPK----EPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAP 799
Cdd:PLN03209  454 SPTAPTGVSPSVSSTSSVPAVPDTAPATAATDAAAPPPANmrplSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVG 533

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 735997426  800 KELAPTTTKGPTSTTSDKPAPTTP----KETAPttPKEPAPTTPK 840
Cdd:PLN03209  534 NSAPPTALADEQHHAQPKPRPLSPytmyEDLKP--PTSPTPSPVL 576

PHA03247

large tegument protein UL36; Provisional

377-588

1.85e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 1.85e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  377 TPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTTKEPAPTTTKSAPTT-------------PKEPA 436
Cdd:PHA03247  268 APETARGATGPPPPPEAAAPNGAAAPPDgvwgaalAGAPLALPAPPDPPPPAPAGDAEEEDDedgamevvsplprPRQHY 347

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  437 PTT-PKKPAPT-TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTpKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEP 514
Cdd:PHA03247  348 PLGfPKRRRPTwTPPSSLEDLSAGRHHPKRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPAS 426

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997426  515 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 588
Cdd:PHA03247  427 APPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLGRHPDT 500

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

389-549

1.85e-03

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.66 E-value: 1.85e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  389 APTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKS--APTTPKEPA-PTTPKKPAPTTPKEPAPTTPKEPTPTT-- 463
Cdd:PRK13108  275 APKGREAPGALRGSEYVVDEALEREPAELAAAAVASAASavGPVGPGEPNqPDDVAEAVKAEVAEVTDEVAAESVVQVad 354

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  464 ----PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 539
Cdd:PRK13108  355 rdgeSTPAVEETSEADIEREQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAV 434

                         170
                  ....*....|
gi 735997426  540 TTTKSAPTTP 549
Cdd:PRK13108  435 AGPGDDPAEP 444

rne

PRK10811

ribonuclease E; Reviewed

359-514

2.08e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.72 E-value: 2.08e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  359 ASTTPKEPTPTTIKSAPTTPKEPAPTTtksapttpkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT---TPKEP 435
Cdd:PRK10811  876 AAAVEPVVSAPVVEAVAEVVEEPVVVA---------EPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAVaqeVAEHA 946

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  436 APTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEP--------APTTpKEPA 507
Cdd:PRK10811  947 EPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEAtvehnhatAPMT-RAPA 1025


                  ....*..
gi 735997426  508 PTTTKEP 514
Cdd:PRK10811 1026 PEYVPEA 1032

rne

PRK10811

ribonuclease E; Reviewed

427-589

2.26e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.72 E-value: 2.26e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  427 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTkEPAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEP 506
Cdd:PRK10811  844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV-EAVAEVVEEPVVVAE--PQPEEVVVVETTHPEVI 920

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  507 APTTTKEPSPTTPKE-------PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPsPTTTKEPAPTTPKEPAPTTPKKPAPT 579
Cdd:PRK10811  921 AAPVTEQPQVITESDvavaqevAEHAEPVVEPQDETADIEEAAETAEVVVAEP-EVVAQPAAPVVAEVAAEVETVTAVEP 999

                         170
                  ....*....|
gi 735997426  580 TPKEPAPTTP 589
Cdd:PRK10811 1000 EVAPAQVPEA 1009

PRK07003

DNA polymerase III subunit gamma/tau;

695-906

2.44e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 2.44e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  695 EPAPTTPKETAPTTPkGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPttpkEPAPTTPKEPA 774
Cdd:PRK07003  359 EPAVTGGGAPGGGVP-ARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATR----AEAPPAAPAPP 433

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  775 PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKgptsttsDKPAPTTPKETAPTTPKEPAPttPKKPAPTTPETPPPTT 854
Cdd:PRK07003  434 ATADRGDDAADGDAPVPAKANARASADSRCDERD-------AQPPADSGSASAPASDAPPDA--AFEPAPRAAAPSAATP 504

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 735997426  855 SEVSTPTTTKEpttihkSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAA 906
Cdd:PRK07003  505 AAVPDARAPAA------ASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAA 550

PRK13914

invasion associated endopeptidase;

371-565

2.58e-03

invasion associated endopeptidase;

Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 42.10 E-value: 2.58e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  371 IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEpAPTTTKSAPT-TPKEPAPTTPKKPAPTTPK 449
Cdd:PRK13914  143 VTSTPVAPTQEVKKETTTQQAAPAAETKTEVKQTTQATTPAPKVAETKE-TPVVDQNATThAVKSGDTIWALSVKYGVSV 221

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  450 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTP-----KEPAPTAPKKPAP----TTPKEPAPTTPKEPAP---TTTKEPSPT 517
Cdd:PRK13914  222 QDIMSWNNLSSSSIYVGQKLAIKQTANTATpkaevKTEAPAAEKQAAPvvkeNTNTNTATTEKKETTTqqqTAPKAPTEA 301

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 735997426  518 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 565
Cdd:PRK13914  302 AKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNS 349

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

382-448

2.81e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 42.24 E-value: 2.81e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  382 APTTTKSAPT---TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtttkSAPTTPKEPAPTTPKKPAPTTP 448
Cdd:PRK14954  381 APSPAGSPDVkkkAPEPDLPQPDRHPGPAKPEAPGARPAELPSP----ASAPTPEQQPPVARSAPLPPSP 446

PHA03247

large tegument protein UL36; Provisional

396-585

3.04e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 3.04e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  396 PAPTTTKEPAPTTPKEPAPTTTKePAPTTTKSAPTTPKEPAP---------TTPKKPAPTTPKEPAPTTPKEPTPTTPKE 466
Cdd:PHA03247  255 PAPPPVVGEGADRAPETARGATG-PPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGA 333

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  467 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT------PKEPAPTTTKEPSP--TTPKEPAPTTTKSAPTTTKEPA 538
Cdd:PHA03247  334 MEVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSagrhhpKRASLPTRKRRSARhaATPFARGPGGDDQTRPAAPVPA 413

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 735997426  539 PTTTKSAPTTPK-EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 585
Cdd:PHA03247  414 SVPTPAPTPVPAsAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEP 461

PRK12323

DNA polymerase III subunit gamma/tau;

537-730

3.27e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 3.27e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  537 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 616
Cdd:PRK12323  374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  617 APTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNtPKEPAPTTPKEPAPTTPKEP 696
Cdd:PRK12323  454 PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPA-QPDAAPAGWVAESIPDPATA 532

                         170       180       190
                  ....*....|....*....|....*....|....
gi 735997426  697 APTTPKETAPTtpkgtAPTTLKEPAPTTPKKPAP 730
Cdd:PRK12323  533 DPDDAFETLAP-----APAAAPAPRAAAATEPVV 561

PHA03247

large tegument protein UL36; Provisional

634-843

3.30e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 3.30e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  634 PTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP---------TTPKEPAPTTPKEPAPTTPKET 704
Cdd:PHA03247  247 PLRGDIAAPAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEE 326

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  705 ApTTPKGTAPTTLKEPAPTT------PKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTP 778
Cdd:PHA03247  327 E-DDEDGAMEVVSPLPRPRQhyplgfPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQT 405

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  779 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPA 843
Cdd:PHA03247  406 RPAAPVPASVPTPAPTPVPASAPPPPATPL---------PSAEPGSDDGPAPPPERQPPAPATEP 461

PRK12757

cell division protein FtsN; Provisional

518-585

3.41e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.80 E-value: 3.41e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  518 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP--KEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 585
Cdd:PRK12757  111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPprQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180

PHA03378

EBNA-3B; Provisional

383-574

3.65e-03

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 3.65e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  383 PTTTKSAPTTPKEPAPTTTKEPA----PTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPKEPAPTTPKE 458
Cdd:PHA03378  676 PSPTGANTMLPIQWAPGTMQPPPraptPMRPPAAPPGRAQRPAAATGRARP-----PAAAPGRARPPAAAPGRARPPAAA 750

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  459 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 538
Cdd:PHA03378  751 PGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLT 830

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 735997426  539 PTTTKSAPTTpKEPSPTTTKEPAPTTPKEPAPTTPK 574
Cdd:PHA03378  831 GGVKRGRPSL-KKPAALERQAAAGPTPSPGSGTSDK 865

PRK10819

transport protein TonB; Provisional

474-590

4.10e-03

transport protein TonB; Provisional

Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 40.44 E-value: 4.10e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK-EP 552
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKrEV 121

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 735997426  553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKePAPTTPK 590
Cdd:PRK10819  122 KPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSS 158

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

633-721

4.34e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.80 E-value: 4.34e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  633 APTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKgt 712
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE-- 116


                  ....*....
gi 735997426  713 aPTTLKEPA 721
Cdd:PRK12270  117 -VTPLRGAA 124

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

537-609

4.50e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.33 E-value: 4.50e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997426  537 PAPTTTKSAPTTPKEPSPTTTKEPAP----TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 609
Cdd:PRK14950  376 PSPVRPTPAPSTRPKAAAAANIPPKEpvreTATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAPPKE 452

PRK14971

DNA polymerase III subunit gamma/tau;

707-832

4.77e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 41.30 E-value: 4.77e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  707 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTL 786
Cdd:PRK14971  368 DASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAV 447

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 735997426  787 KEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 832
Cdd:PRK14971  448 RPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

474-570

5.10e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.08 E-value: 5.10e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPttpkepaptttksaptttkEPAPTTTKSAPTTPKEPS 553
Cdd:PRK14954  382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSP-------------------ASAPTPEQQPPVARSAPL 442

                          90
                  ....*....|....*..
gi 735997426  554 PTTTKEPAPTTPKEPAP 570
Cdd:PRK14954  443 PPSPQASAPRNVASGKP 459

PRK10905

cell division protein DamX; Validated

477-588

5.21e-03

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.69 E-value: 5.21e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  477 TTPKEPAPTAPKKPAPTTPKEPA-PTTPKEPAPTTTKEPSPTTPKEPAPTttksaptttkepAPTTTKSAPTTPKEPSPT 555
Cdd:PRK10905  122 TLPTEPATVAPVRNGNASRQTAKtQTAERPATTRPARKQAVIEPKKPQAT------------AKTEPKPVAQTPKRTEPA 189

                          90       100       110
                  ....*....|....*....|....*....|...
gi 735997426  556 TTKEPAPTtpkePAPTTPKKPAPTTPKEPAPTT 588
Cdd:PRK10905  190 APVASTKA----PAATSTPAPKETATTAPVQTA 218

PRK13914

invasion associated endopeptidase;

373-580

5.35e-03

invasion associated endopeptidase;

Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 40.94 E-value: 5.35e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPapttpKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:PRK13914  142 KVTSTPVAPTQEVKKETTTQQAAPAAETKTEV-----KQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVK 216

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKpapTTPKEPAPTTPKEPAP----------TTTKEPSPTTPKEP 522
Cdd:PRK13914  217 YGVSVQDIMSWNNLSSSSIYVGQKLAIKQTANTATPK---AEVKTEAPAAEKQAAPvvkentntntATTEKKETTTQQQT 293

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  523 APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 580
Cdd:PRK13914  294 APKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNSNT 351

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

323-448

5.43e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.24 E-value: 5.43e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  323 PTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTpttiKSAPTTPKEPAPtttkSAPTTPKEPAPTTTK 402
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAA----ASAPAAPPAAAP----PAPVAAPAAAAPAAA 437

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 735997426  403 EPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTP 448
Cdd:PRK14951  438 PAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP 483

PRK11633

cell division protein DedD; Provisional

383-493

5.54e-03

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.99 E-value: 5.54e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  383 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPapttpkeptpt 462
Cdd:PRK11633   57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKV----------- 125

                          90       100       110
                  ....*....|....*....|....*....|.
gi 735997426  463 tpkepapttkEPAPTTPKEPAPTAPKKPAPT 493
Cdd:PRK11633  126 ----------EAPPAPKPEPKPVVEEKAAPT 146

PRK08691

DNA polymerase III subunits gamma and tau; Validated

328-559

5.62e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 41.23 E-value: 5.62e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  328 LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSA-PTTPKEPAPTTTKEPAP 406
Cdd:PRK08691  361 LAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAgPVSNQENNDVPPWEDAP 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  407 TTPKEPAPTTTKEPAPTTTKSAPTTPkepapttpkkpapttPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP-KEPAPT 485
Cdd:PRK08691  441 DEAQTAAGTAQTSAKSIQTASEAETP---------------PENQVSKNKAADNETDAPLSEVPSENPIQATPnDEAVET 505

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997426  486 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSaPTTPKEPSPTTTKE 559
Cdd:PRK08691  506 ETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGG-NNTPSAPPPEFSTE 578

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

632-732

5.67e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 5.67e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  632 LAPTTPEKPAPTTPEelapttPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTT-PKEPAPTTPKEPAPTTPKETAPTTPK 710
Cdd:PRK14950  360 LVPVPAPQPAKPTAA------APSPVRPTPAPSTRPKAAAAANIPPKEPVRETaTPPPVPPRPVAPPVPHTPESAPKLTR 433

                          90       100
                  ....*....|....*....|..
gi 735997426  711 GTAPTtlkEPAPTTPKKPAPKE 732
Cdd:PRK14950  434 AAIPV---DEKPKYTPPAPPKE 452

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

488-548

5.98e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 5.98e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997426   488 KKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT 548
Cdd:TIGR00601   77 PKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPST 137

PRK14971

DNA polymerase III subunit gamma/tau;

372-500

6.11e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 40.91 E-value: 6.11e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  372 KSAPTTPKEPA-PTTTKSAPTTPkePAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 450
Cdd:PRK14971  369 ASGGRGPKQHIkPVFTQPAAAPQ--PSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQA 446

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 735997426  451 paPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAP 500
Cdd:PRK14971  447 --VRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQK 494

COG5373

Uncharacterized membrane protein [Function unknown];

670-732

6.25e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 6.25e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997426  670 KAAAPNTPKEPAPT---TPKEPAPTTPKEPAPTTPkETAPTTPKGTAPTTLKEPAPTTP-KKPAPKE 732
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPaAAPAAAS 105

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

373-520

6.26e-03

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.89 E-value: 6.26e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  373 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 452
Cdd:COG3469    67 SSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGS 146

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK 520
Cdd:COG3469   147 TTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPK 214

COG5373

Uncharacterized membrane protein [Function unknown];

496-572

6.30e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 6.30e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997426  496 KEPAPTTPKEPAPTTTKEPSPTTPkepaptttksapTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 572
Cdd:COG5373    40 AAEAASAPAEPEPEAAAAATAAAP------------EAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PRK13335

superantigen-like protein SSL3; Reviewed;

304-441

6.55e-03

superantigen-like protein SSL3; Reviewed;

Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.49 E-value: 6.55e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  304 TTSAKETQSIEKTSAkDLAPTSKV--LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEP 381
Cdd:PRK13335   24 TTQSVKAEKIQSTKV-DKVPTLKAerLAMINITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEE 102

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  382 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-----TTTKSAPTTPKEPAPTTPK 441
Cdd:PRK13335  103 QKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPmqstkSDTPQSPTIKQAQTDMTPK 167

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

299-419

6.61e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 6.61e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  299 DGKEKTTS----AKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAsttpkeptpttiKSA 374
Cdd:PRK14950  338 DFQLRTTSygqlPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEP------------VRE 405

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 735997426  375 PTTPKEPAPTTTKSAPTTPKEPAPTTTKE--PAPTTPKEPAPTTTKE 419
Cdd:PRK14950  406 TATPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK12757

cell division protein FtsN; Provisional

474-523

6.78e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.03 E-value: 6.78e-03

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 735997426  474 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 523
Cdd:PRK12757  131 PATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180

PRK14948

DNA polymerase III subunit gamma/tau;

359-516

7.09e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 40.72 E-value: 7.09e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  359 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP--- 435
Cdd:PRK14948  361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPsln 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  436 ----------------------------------------------------------------------------APTT 439
Cdd:PRK14948  441 leelwqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesqsgsASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997426  440 PKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKepaPTTPKEPAPTTTKEPSP 516
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPP---PPIPEEPTPSPTKDSSP 594

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

677-734

7.23e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 40.70 E-value: 7.23e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997426  677 PKEPAPTTPKEPAPTTPKEPAPTTPKETAP---TTPKGTAPTTLKEPAPTTPKKPAPKELA 734
Cdd:PRK14954  395 PEPDLPQPDRHPGPAKPEAPGARPAELPSPasaPTPEQQPPVARSAPLPPSPQASAPRNVA 455

PHA03307

transcriptional regulator ICP4; Provisional

687-922

7.35e-03

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.92 E-value: 7.35e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  687 EPAPTTPKEPAPTTPKETAPTtPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPA 766
Cdd:PHA03307   52 AVTVVAGAAACDRFEPPTGPP-PGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSP 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  767 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTT 846
Cdd:PHA03307  131 APDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRS 210

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997426  847 PETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 922
Cdd:PHA03307  211 SPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS 286

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

373-440

7.94e-03

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 7.94e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  373 SAPTTPKEPAPTTTkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP 440
Cdd:NF041121   19 AAPPSPEGPAPTAA-SQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAP 85

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

748-843

7.97e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 7.97e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  748 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTP 823
Cdd:PRK14951  378 KKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAAsapaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAP 457

                          90       100
                  ....*....|....*....|
gi 735997426  824 KETAPTTPKEPAPTTPKKPA 843
Cdd:PRK14951  458 ETVAIPVRVAPEPAVASAAP 477

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

394-521

8.00e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 40.60 E-value: 8.00e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  394 KEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkE 473
Cdd:COG3266   256 KAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAA------------------------A 311

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 735997426  474 PAPTTPKEPAPTA--PKKPAPTTPKEPAP-TTPKEPAPTTTKEPSPTTPKE 521
Cdd:COG3266   312 AAPAEAAAPQPTAakPVVTETAAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

552-647

8.38e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 40.64 E-value: 8.38e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  552 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPkepaptttkkpapttpKEPAPTTPKETAPTTPKKLTPTTPEK 631
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP----------------AAAAPAAPPKPAAAAAAAAAPAAPPA 101

                          90
                  ....*....|....*.
gi 735997426  632 LAPTTPEKPAPTTPEE 647
Cdd:PRK12270  102 AAAAAAPAAAAVEDEV 117

PRK07003

DNA polymerase III subunit gamma/tau;

679-855

9.00e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.60 E-value: 9.00e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  679 EPAPTTPKEPAPTTPKEPAPTTPKETA-PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGT 757
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPGArAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  758 APTTPKEPAPTTPKEPAPTTPKGTAPttlkEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPT 837
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCD----ERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPA 514

                         170
                  ....*....|....*...
gi 735997426  838 TPKKPAPTTPETPPPTTS 855
Cdd:PRK07003  515 AASREDAPAAAAPPAPEA 532

PRK04654

sec-independent translocase; Provisional

481-576

9.03e-03

sec-independent translocase; Provisional

Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 39.41 E-value: 9.03e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  481 EPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAptttksaptttkePAPTTTKSAPTTPKEPSPTTTKEP 560
Cdd:PRK04654  132 EPGAGQAHTPVPAPAPVIAQAQPIAPAPHQTLVPAPHDTIVPA-------------PHAAHLPSAPATPVSVAPVDAGTS 198

                          90
                  ....*....|....*.
gi 735997426  561 APTTPKEPAPTTPKKP 576
Cdd:PRK04654  199 ASPTPSEPTKIQEKQP 214

PRK10905

cell division protein DamX; Validated

499-636

9.18e-03

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 39.92 E-value: 9.18e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  499 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP-----APTTPKEPAPTTP 573
Cdd:PRK10905  104 ALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIEPkkpqaTAKTEPKPVAQTP 183

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997426  574 KKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTT 636
Cdd:PRK10905  184 KRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSS 246

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

423-518

9.21e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.26 E-value: 9.21e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   423 TTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTTPKEPAPTT 502
Cdd:TIGR00601   77 PKTGTGKVAPPAATPTSAPTPTPSPP-------------------------ASPASGMSAAPASAVEEKSPSEESATATA 131

                           90
                   ....*....|....*.
gi 735997426   503 PKEPAPTTTKEPSPTT 518
Cdd:TIGR00601  132 PESPSTSVPSSGSDAA 147

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

476-874

9.42e-03

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 40.52 E-value: 9.42e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   476 PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPT-----TTKSAPTTPK 550
Cdd:pfam03154  180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSphpplQPMTQPPPPS 259

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   551 EPSPTTTKEPAPTTPKEPAPTtPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETapttpkkltpttpE 630
Cdd:pfam03154  260 QVSPQPLPQPSLHGQMPPMPH-SLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQR-------------I 325

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   631 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTT-- 708
Cdd:pfam03154  326 HTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSth 405

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   709 -PKGTAPTTLKEPAPTTPKKPAPKEL-APTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTL 786
Cdd:pfam03154  406 hPPSAHPPPLQLMPQSQQLPPPPAQPpVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTST 485

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426   787 kepAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPkkpaptTPETPPPTTSEVSTPTTTKEP 866
Cdd:pfam03154  486 ---SSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPP------PPRSPSPEPTVVNTPSHASQS 556


                   ....*...
gi 735997426   867 TTIHKSPD 874
Cdd:pfam03154  557 ARFYKHLD 564

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

378-435

9.54e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 9.54e-03

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 735997426  378 PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP 435
Cdd:PTZ00144  124 PPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTP 181

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

705-838

9.61e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 9.61e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  705 APTTPKGTAPTTLKEPAPTTP-KKPAPKELAPTTTKEPtsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAP 783
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPAAA-------PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAA 441

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 735997426  784 TTLKEPAPTTPKKPAPKELAptttkgPTSTTSDKPAPTTPKETAPTTPKEPAPTT 838
Cdd:PRK14951  442 PAAVALAPAPPAQAAPETVA------IPVRVAPEPAVASAAPAPAAAPAAARLTP 490

PRK13042

superantigen-like protein SSL4; Reviewed;

691-779

9.87e-03

superantigen-like protein SSL4; Reviewed;

Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 39.62 E-value: 9.87e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997426  691 TTPKEPAPTTPKETAPTTPKGTAPTTlkepaptTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKepAPTTP 770
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPST-------KVEAPQSKPNATTPPSTKVEAPQQTPNATTPSSTKVETPQ--SPTTK 93


                  ....*....
gi 735997426  771 KEPAPTTPK 779
Cdd:PRK13042   94 QVPTEINPK 102

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01