general transcription factor IIF subunit 2 [Homo sapiens]
Protein Classification
general transcription factor IIF subunit 2( domain architecture ID 3765)
general transcription factor IIF subunit 2 (GTF2F2) is a subunit of TFIIF, which is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB
List of domain hits
| Name | Accession | Description | Interval | E-value | |||||
| TFIIF_beta super family | cl02122 | Transcription initiation factor IIF, beta subunit; The TFIIF-beta subunit, also called RNA ... |
6-247 | 3.50e-34 | |||||
Transcription initiation factor IIF, beta subunit; The TFIIF-beta subunit, also called RNA Polymerase II-associating Protein 30 (RAP30), forms a heteromeric complex of RAP30/74 (TFIIF, beta/gamma) that is involved in both initiation and elongation of RNA chains by RNA polymerase II. Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. TFIIF-beta binds directly to RNA polymerase II and helps bring polymerase into a pre-initiation complex. The actual alignment was detected with superfamily member COG5090: Pssm-ID: 445677 [Multi-domain] Cd Length: 297 Bit Score: 124.69 E-value: 3.50e-34
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| Name | Accession | Description | Interval | E-value | |||||
| TFG2 | COG5090 | Transcription initiation factor IIF, small subunit (RAP30) [Transcription]; |
6-247 | 3.50e-34 | |||||
Transcription initiation factor IIF, small subunit (RAP30) [Transcription]; Pssm-ID: 227421 [Multi-domain] Cd Length: 297 Bit Score: 124.69 E-value: 3.50e-34
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| TFIIF_beta | pfam02270 | TFIIF, beta subunit HTH domain; Accurate transcription in vivo requires at least six general ... |
176-240 | 1.91e-32 | |||||
TFIIF, beta subunit HTH domain; Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIF (TFIIF) is a tetramer of two beta subunits associate with two alpha subunits which interacts directly with RNA polymerase II. The beta subunit of TFIIF is required for recruitment of RNA polymerase II onto the promoter. Pssm-ID: 426691 Cd Length: 65 Bit Score: 113.09 E-value: 1.91e-32
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| TFIIF_beta | cd07980 | Transcription initiation factor IIF, beta subunit; The TFIIF-beta subunit, also called RNA ... |
5-118 | 3.05e-32 | |||||
Transcription initiation factor IIF, beta subunit; The TFIIF-beta subunit, also called RNA Polymerase II-associating Protein 30 (RAP30), forms a heteromeric complex of RAP30/74 (TFIIF, beta/gamma) that is involved in both initiation and elongation of RNA chains by RNA polymerase II. Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. TFIIF-beta binds directly to RNA polymerase II and helps bring polymerase into a pre-initiation complex. Pssm-ID: 259828 Cd Length: 123 Bit Score: 114.35 E-value: 3.05e-32
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| Name | Accession | Description | Interval | E-value | |||||
| TFG2 | COG5090 | Transcription initiation factor IIF, small subunit (RAP30) [Transcription]; |
6-247 | 3.50e-34 | |||||
Transcription initiation factor IIF, small subunit (RAP30) [Transcription]; Pssm-ID: 227421 [Multi-domain] Cd Length: 297 Bit Score: 124.69 E-value: 3.50e-34
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| TFIIF_beta | pfam02270 | TFIIF, beta subunit HTH domain; Accurate transcription in vivo requires at least six general ... |
176-240 | 1.91e-32 | |||||
TFIIF, beta subunit HTH domain; Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIF (TFIIF) is a tetramer of two beta subunits associate with two alpha subunits which interacts directly with RNA polymerase II. The beta subunit of TFIIF is required for recruitment of RNA polymerase II onto the promoter. Pssm-ID: 426691 Cd Length: 65 Bit Score: 113.09 E-value: 1.91e-32
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| TFIIF_beta | cd07980 | Transcription initiation factor IIF, beta subunit; The TFIIF-beta subunit, also called RNA ... |
5-118 | 3.05e-32 | |||||
Transcription initiation factor IIF, beta subunit; The TFIIF-beta subunit, also called RNA Polymerase II-associating Protein 30 (RAP30), forms a heteromeric complex of RAP30/74 (TFIIF, beta/gamma) that is involved in both initiation and elongation of RNA chains by RNA polymerase II. Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. TFIIF-beta binds directly to RNA polymerase II and helps bring polymerase into a pre-initiation complex. Pssm-ID: 259828 Cd Length: 123 Bit Score: 114.35 E-value: 3.05e-32
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| TFIIF_beta_N | pfam17683 | TFIIF, beta subunit N-terminus; Accurate transcription in vivo requires at least six general ... |
15-119 | 7.80e-22 | |||||
TFIIF, beta subunit N-terminus; Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIF (TFIIF) is a tetramer of two beta subunits associate with two alpha subunits which interacts directly with RNA polymerase II. The beta subunit of TFIIF is required for recruitment of RNA polymerase II onto the promoter. Pssm-ID: 465458 Cd Length: 104 Bit Score: 86.63 E-value: 7.80e-22
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