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Conserved domains on  [gi|38683860|ref|NP_003740|]
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insulin receptor substrate 2 [Homo sapiens]

Protein Classification

insulin receptor substrate( domain architecture ID 10100909)

insulin receptor substrate is a key mediator in insulin signaling, acting as a docking protein between the insulin receptor and a complex network of intracellular signaling molecules containing Src homology 2 (SH2) domains

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PTB_IRS cd01204
Insulin receptor substrate phosphotyrosine-binding domain (PTBi); Insulin receptor substrate ...
194-297 3.51e-65

Insulin receptor substrate phosphotyrosine-binding domain (PTBi); Insulin receptor substrate (IRS) molecules are mediators in insulin signaling and play a role in maintaining basic cellular functions such as growth and metabolism. They act as docking proteins between the insulin receptor and a complex network of intracellular signaling molecules containing Src homology 2 (SH2) domains. Four members (IRS-1, IRS-2, IRS-3, IRS-4) of this family have been identified that differ as to tissue distribution, subcellular localization, developmental expression, binding to the insulin receptor, and interaction with SH2 domain-containing proteins. IRS molecules have an N-terminal PH domain, followed by an IRS-like PTB domain which has a PH-like fold. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains. This cd is part of the IRS-like subgroup.


:

Pssm-ID: 269915  Cd Length: 106  Bit Score: 215.58  E-value: 3.51e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860  194 YREVWQVNLKPKGLGQSKNLTGVYRLCLSARTIGFVKLNCE--QPSVTLQLMNIRRCGHSDSFFFIEVGRSAVTGPGELW 271
Cdd:cd01204    1 FEHVWQVTVKKKGLGQSKNLTGIYRLCLTSKTLSLVKLNSEknPPSVEIQLMNIRRCGHSENFFFIEVGRSAVTGPGELW 80
                         90       100
                 ....*....|....*....|....*.
gi 38683860  272 MQADDSVVAQNIHETILEAMKALKEL 297
Cdd:cd01204   81 MQVDDSVVAQNMHETILEAMKALSEE 106
PH_IRS cd01257
Insulin receptor substrate (IRS) pleckstrin homology (PH) domain; Insulin receptor substrate ...
31-147 6.80e-55

Insulin receptor substrate (IRS) pleckstrin homology (PH) domain; Insulin receptor substrate (IRS) molecules are mediators in insulin signaling and play a role in maintaining basic cellular functions such as growth and metabolism. They act as docking proteins between the insulin receptor and a complex network of intracellular signaling molecules containing Src homology 2 (SH2) domains. Four members (IRS-1, IRS-2, IRS-3, IRS-4) of this family have been identified that differ as to tissue distribution, subcellular localization, developmental expression, binding to the insulin receptor, and interaction with SH2 domain-containing proteins. IRS molecules have an N-terminal PH domain, followed by an IRS-like PTB domain which has a PH-like fold. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.cytoskeletal associated molecules, and in lipid associated enzymes.


:

Pssm-ID: 269959  Cd Length: 106  Bit Score: 185.96  E-value: 6.80e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   31 VRKCGYLRKQKHGHKRFFVLRGPGAGGdeatagggsapqPPRLEYYESEKKWRSKAgAPKRVIALDCCLNINKRADAKHK 110
Cdd:cd01257    3 VRKSGYLKKLKTMRKRYFVLRAESHGG------------PARLEYYENEKKFRRNA-EPKRVIPLSSCFNINKRADAKHK 69
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 38683860  111 YLIALYTKDEYFAVAAENEQEQEGWYRALTDLVSEGR 147
Cdd:cd01257   70 HLIALYTKDECFGLVAESEEEQDEWYQALLELQRPAR 106
 
Name Accession Description Interval E-value
PTB_IRS cd01204
Insulin receptor substrate phosphotyrosine-binding domain (PTBi); Insulin receptor substrate ...
194-297 3.51e-65

Insulin receptor substrate phosphotyrosine-binding domain (PTBi); Insulin receptor substrate (IRS) molecules are mediators in insulin signaling and play a role in maintaining basic cellular functions such as growth and metabolism. They act as docking proteins between the insulin receptor and a complex network of intracellular signaling molecules containing Src homology 2 (SH2) domains. Four members (IRS-1, IRS-2, IRS-3, IRS-4) of this family have been identified that differ as to tissue distribution, subcellular localization, developmental expression, binding to the insulin receptor, and interaction with SH2 domain-containing proteins. IRS molecules have an N-terminal PH domain, followed by an IRS-like PTB domain which has a PH-like fold. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains. This cd is part of the IRS-like subgroup.


Pssm-ID: 269915  Cd Length: 106  Bit Score: 215.58  E-value: 3.51e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860  194 YREVWQVNLKPKGLGQSKNLTGVYRLCLSARTIGFVKLNCE--QPSVTLQLMNIRRCGHSDSFFFIEVGRSAVTGPGELW 271
Cdd:cd01204    1 FEHVWQVTVKKKGLGQSKNLTGIYRLCLTSKTLSLVKLNSEknPPSVEIQLMNIRRCGHSENFFFIEVGRSAVTGPGELW 80
                         90       100
                 ....*....|....*....|....*.
gi 38683860  272 MQADDSVVAQNIHETILEAMKALKEL 297
Cdd:cd01204   81 MQVDDSVVAQNMHETILEAMKALSEE 106
PH_IRS cd01257
Insulin receptor substrate (IRS) pleckstrin homology (PH) domain; Insulin receptor substrate ...
31-147 6.80e-55

Insulin receptor substrate (IRS) pleckstrin homology (PH) domain; Insulin receptor substrate (IRS) molecules are mediators in insulin signaling and play a role in maintaining basic cellular functions such as growth and metabolism. They act as docking proteins between the insulin receptor and a complex network of intracellular signaling molecules containing Src homology 2 (SH2) domains. Four members (IRS-1, IRS-2, IRS-3, IRS-4) of this family have been identified that differ as to tissue distribution, subcellular localization, developmental expression, binding to the insulin receptor, and interaction with SH2 domain-containing proteins. IRS molecules have an N-terminal PH domain, followed by an IRS-like PTB domain which has a PH-like fold. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.cytoskeletal associated molecules, and in lipid associated enzymes.


Pssm-ID: 269959  Cd Length: 106  Bit Score: 185.96  E-value: 6.80e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   31 VRKCGYLRKQKHGHKRFFVLRGPGAGGdeatagggsapqPPRLEYYESEKKWRSKAgAPKRVIALDCCLNINKRADAKHK 110
Cdd:cd01257    3 VRKSGYLKKLKTMRKRYFVLRAESHGG------------PARLEYYENEKKFRRNA-EPKRVIPLSSCFNINKRADAKHK 69
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 38683860  111 YLIALYTKDEYFAVAAENEQEQEGWYRALTDLVSEGR 147
Cdd:cd01257   70 HLIALYTKDECFGLVAESEEEQDEWYQALLELQRPAR 106
IRS pfam02174
PTB domain (IRS-1 type);
195-296 5.91e-44

PTB domain (IRS-1 type);


Pssm-ID: 460473  Cd Length: 99  Bit Score: 154.33  E-value: 5.91e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860    195 REVWQVNLKPKGLGQSKNLTGVYRLCLSARTIGFVKLNCEQPSVTLQLMNIRRCGHSDSFFFIEVGRSAVTGPGELWMQA 274
Cdd:pfam02174    1 VEVFPVTVRRTGASERCGLSGSYRLCLTAEALTLDKLNTRVPLVSWPLTSLRRYGRDKNFFSFEAGRRCVTGEGEFWFQT 80
                           90       100
                   ....*....|....*....|..
gi 38683860    275 DDsvvAQNIHETILEAMKALKE 296
Cdd:pfam02174   81 DD---AEEIFETVLAAMKAQKE 99
PTBI smart00310
Phosphotyrosine-binding domain (IRS1-like);
196-296 9.18e-36

Phosphotyrosine-binding domain (IRS1-like);


Pssm-ID: 197644  Cd Length: 99  Bit Score: 130.99  E-value: 9.18e-36
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860     196 EVWQVNLKPKGLGQSKNlTGVYRLCLSARTIGFVK-LNCEQPSVTLQLMNIRRCGHSDSFFFIEVGRSAVTGPGELWMQa 274
Cdd:smart00310    2 QFWVTIRKTEGLERCPL-SGSYRLRLTSEELVLWRgLNPRVELVVWPLLSLRRYGRDKVFFFFEAGRRCVSGPGEFTFQ- 79
                            90       100
                    ....*....|....*....|..
gi 38683860     275 ddSVVAQNIHETILEAMKALKE 296
Cdd:smart00310   80 --TVVAQEIFQLVLEAMQAQKN 99
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
31-144 1.84e-09

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 56.40  E-value: 1.84e-09
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860      31 VRKCGYLRKQKHG-----HKRFFVLRGPgaggdeatagggsapqppRLEYYESEKKWRSKAgaPKRVIALDCClNINKRA 105
Cdd:smart00233    1 VIKEGWLYKKSGGgkkswKKRYFVLFNS------------------TLLYYKSKKDKKSYK--PKGSIDLSGC-TVREAP 59
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|...
gi 38683860     106 D---AKHKYLIALYTKDEY-FAVAAENEQEQEGWYRALTDLVS 144
Cdd:smart00233   60 DpdsSKKPHCFEIKTSDRKtLLLQAESEEEREKWVEALRKAIA 102
PH pfam00169
PH domain; PH stands for pleckstrin homology.
31-144 1.41e-07

PH domain; PH stands for pleckstrin homology.


Pssm-ID: 459697 [Multi-domain]  Cd Length: 105  Bit Score: 51.02  E-value: 1.41e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860     31 VRKCGYLRKQKHG-----HKRFFVLRGPgaggdeatagggsapqppRLEYYESEKKWRSKAgaPKRVIALDCC----LNI 101
Cdd:pfam00169    1 VVKEGWLLKKGGGkkkswKKRYFVLFDG------------------SLLYYKDDKSGKSKE--PKGSISLSGCevveVVA 60
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 38683860    102 NKRADAKHKYLIALYTKDEY--FAVAAENEQEQEGWYRALTDLVS 144
Cdd:pfam00169   61 SDSPKRKFCFELRTGERTGKrtYLLQAESEEERKDWIKAIQSAIR 105
 
Name Accession Description Interval E-value
PTB_IRS cd01204
Insulin receptor substrate phosphotyrosine-binding domain (PTBi); Insulin receptor substrate ...
194-297 3.51e-65

Insulin receptor substrate phosphotyrosine-binding domain (PTBi); Insulin receptor substrate (IRS) molecules are mediators in insulin signaling and play a role in maintaining basic cellular functions such as growth and metabolism. They act as docking proteins between the insulin receptor and a complex network of intracellular signaling molecules containing Src homology 2 (SH2) domains. Four members (IRS-1, IRS-2, IRS-3, IRS-4) of this family have been identified that differ as to tissue distribution, subcellular localization, developmental expression, binding to the insulin receptor, and interaction with SH2 domain-containing proteins. IRS molecules have an N-terminal PH domain, followed by an IRS-like PTB domain which has a PH-like fold. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains. This cd is part of the IRS-like subgroup.


Pssm-ID: 269915  Cd Length: 106  Bit Score: 215.58  E-value: 3.51e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860  194 YREVWQVNLKPKGLGQSKNLTGVYRLCLSARTIGFVKLNCE--QPSVTLQLMNIRRCGHSDSFFFIEVGRSAVTGPGELW 271
Cdd:cd01204    1 FEHVWQVTVKKKGLGQSKNLTGIYRLCLTSKTLSLVKLNSEknPPSVEIQLMNIRRCGHSENFFFIEVGRSAVTGPGELW 80
                         90       100
                 ....*....|....*....|....*.
gi 38683860  272 MQADDSVVAQNIHETILEAMKALKEL 297
Cdd:cd01204   81 MQVDDSVVAQNMHETILEAMKALSEE 106
PH_IRS cd01257
Insulin receptor substrate (IRS) pleckstrin homology (PH) domain; Insulin receptor substrate ...
31-147 6.80e-55

Insulin receptor substrate (IRS) pleckstrin homology (PH) domain; Insulin receptor substrate (IRS) molecules are mediators in insulin signaling and play a role in maintaining basic cellular functions such as growth and metabolism. They act as docking proteins between the insulin receptor and a complex network of intracellular signaling molecules containing Src homology 2 (SH2) domains. Four members (IRS-1, IRS-2, IRS-3, IRS-4) of this family have been identified that differ as to tissue distribution, subcellular localization, developmental expression, binding to the insulin receptor, and interaction with SH2 domain-containing proteins. IRS molecules have an N-terminal PH domain, followed by an IRS-like PTB domain which has a PH-like fold. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.cytoskeletal associated molecules, and in lipid associated enzymes.


Pssm-ID: 269959  Cd Length: 106  Bit Score: 185.96  E-value: 6.80e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   31 VRKCGYLRKQKHGHKRFFVLRGPGAGGdeatagggsapqPPRLEYYESEKKWRSKAgAPKRVIALDCCLNINKRADAKHK 110
Cdd:cd01257    3 VRKSGYLKKLKTMRKRYFVLRAESHGG------------PARLEYYENEKKFRRNA-EPKRVIPLSSCFNINKRADAKHK 69
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 38683860  111 YLIALYTKDEYFAVAAENEQEQEGWYRALTDLVSEGR 147
Cdd:cd01257   70 HLIALYTKDECFGLVAESEEEQDEWYQALLELQRPAR 106
IRS pfam02174
PTB domain (IRS-1 type);
195-296 5.91e-44

PTB domain (IRS-1 type);


Pssm-ID: 460473  Cd Length: 99  Bit Score: 154.33  E-value: 5.91e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860    195 REVWQVNLKPKGLGQSKNLTGVYRLCLSARTIGFVKLNCEQPSVTLQLMNIRRCGHSDSFFFIEVGRSAVTGPGELWMQA 274
Cdd:pfam02174    1 VEVFPVTVRRTGASERCGLSGSYRLCLTAEALTLDKLNTRVPLVSWPLTSLRRYGRDKNFFSFEAGRRCVTGEGEFWFQT 80
                           90       100
                   ....*....|....*....|..
gi 38683860    275 DDsvvAQNIHETILEAMKALKE 296
Cdd:pfam02174   81 DD---AEEIFETVLAAMKAQKE 99
PTBI smart00310
Phosphotyrosine-binding domain (IRS1-like);
196-296 9.18e-36

Phosphotyrosine-binding domain (IRS1-like);


Pssm-ID: 197644  Cd Length: 99  Bit Score: 130.99  E-value: 9.18e-36
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860     196 EVWQVNLKPKGLGQSKNlTGVYRLCLSARTIGFVK-LNCEQPSVTLQLMNIRRCGHSDSFFFIEVGRSAVTGPGELWMQa 274
Cdd:smart00310    2 QFWVTIRKTEGLERCPL-SGSYRLRLTSEELVLWRgLNPRVELVVWPLLSLRRYGRDKVFFFFEAGRRCVSGPGEFTFQ- 79
                            90       100
                    ....*....|....*....|..
gi 38683860     275 ddSVVAQNIHETILEAMKALKE 296
Cdd:smart00310   80 --TVVAQEIFQLVLEAMQAQKN 99
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
31-144 1.84e-09

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 56.40  E-value: 1.84e-09
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860      31 VRKCGYLRKQKHG-----HKRFFVLRGPgaggdeatagggsapqppRLEYYESEKKWRSKAgaPKRVIALDCClNINKRA 105
Cdd:smart00233    1 VIKEGWLYKKSGGgkkswKKRYFVLFNS------------------TLLYYKSKKDKKSYK--PKGSIDLSGC-TVREAP 59
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|...
gi 38683860     106 D---AKHKYLIALYTKDEY-FAVAAENEQEQEGWYRALTDLVS 144
Cdd:smart00233   60 DpdsSKKPHCFEIKTSDRKtLLLQAESEEEREKWVEALRKAIA 102
PH cd00821
Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are ...
33-139 4.70e-08

Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 275388 [Multi-domain]  Cd Length: 92  Bit Score: 51.77  E-value: 4.70e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   33 KCGYLRKQ-----KHGHKRFFVLRGPgaggdeatagggsapqppRLEYYESEKKWRSKagaPKRVIALDCCLNINKRADA 107
Cdd:cd00821    1 KEGYLLKRgggglKSWKKRWFVLFEG------------------VLLYYKSKKDSSYK---PKGSIPLSGILEVEEVSPK 59
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 38683860  108 KHKYLIALYTKDE---YFAvaAENEQEQEGWYRAL 139
Cdd:cd00821   60 ERPHCFELVTPDGrtyYLQ--ADSEEERQEWLKAL 92
PTB cd00934
Phosphotyrosine-binding (PTB) PH-like fold; PTB domains have a common PH-like fold and are ...
205-291 1.13e-07

Phosphotyrosine-binding (PTB) PH-like fold; PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to bind peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains.


Pssm-ID: 269911  Cd Length: 120  Bit Score: 51.74  E-value: 1.13e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860  205 KGLGQSKNLTGVYRLCLSARTIGFVKLNCEQPSVTLQLMNIRRCGHSDS----FFFIeVGRSAVTGPGELWMQADDSVVA 280
Cdd:cd00934   31 AALKSSKRKPGPVLLEVSSKGVKLLDLDTKELLLRHPLHRISYCGRDPDnpnvFAFI-AGEEGGSGFRCHVFQCEDEEEA 109
                         90
                 ....*....|.
gi 38683860  281 QNIHETILEAM 291
Cdd:cd00934  110 EEILQAIGQAF 120
PH pfam00169
PH domain; PH stands for pleckstrin homology.
31-144 1.41e-07

PH domain; PH stands for pleckstrin homology.


Pssm-ID: 459697 [Multi-domain]  Cd Length: 105  Bit Score: 51.02  E-value: 1.41e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860     31 VRKCGYLRKQKHG-----HKRFFVLRGPgaggdeatagggsapqppRLEYYESEKKWRSKAgaPKRVIALDCC----LNI 101
Cdd:pfam00169    1 VVKEGWLLKKGGGkkkswKKRYFVLFDG------------------SLLYYKDDKSGKSKE--PKGSISLSGCevveVVA 60
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 38683860    102 NKRADAKHKYLIALYTKDEY--FAVAAENEQEQEGWYRALTDLVS 144
Cdd:pfam00169   61 SDSPKRKFCFELRTGERTGKrtYLLQAESEEERKDWIKAIQSAIR 105
PH1_PH_fungal cd13298
Fungal proteins Pleckstrin homology (PH) domain, repeat 1; The functions of these fungal ...
31-139 1.64e-07

Fungal proteins Pleckstrin homology (PH) domain, repeat 1; The functions of these fungal proteins are unknown, but they all contain 2 PH domains. This cd represents the first PH repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270110  Cd Length: 106  Bit Score: 50.70  E-value: 1.64e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   31 VRKCGYL----RKQKHGHKRFFVLRgpgaggdeatagggsapqPPRLEYYESEKKWRskagaPKRVIALDCCLNINKRAD 106
Cdd:cd13298    6 VLKSGYLlkrsRKTKNWKKRWVVLR------------------PCQLSYYKDEKEYK-----LRRVINLSELLAVAPLKD 62
                         90       100       110
                 ....*....|....*....|....*....|...
gi 38683860  107 AKHKYLIALYTKDEYFAVAAENEQEQEGWYRAL 139
Cdd:cd13298   63 KKRKNVFGIYTPSKNLHFRATSEKDANEWVEAL 95
PH_Gab1_Gab2 cd01266
Grb2-associated binding proteins 1 and 2 pleckstrin homology (PH) domain; The Gab subfamily ...
45-142 2.55e-07

Grb2-associated binding proteins 1 and 2 pleckstrin homology (PH) domain; The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. The members in this cd include the Gab1 and Gab2 proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 241297  Cd Length: 123  Bit Score: 50.72  E-value: 2.55e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   45 KRFFVLRGPGAGGDeatagggsapqPPRLEYYESEKkwrskAGAPKRVIALDCC------LNINKRaDAKHKYLIALYTK 118
Cdd:cd01266   26 KRWFVLRSGRLSGD-----------PDVLEYYKNDH-----AKKPIRVIDLNLCeqvdagLTFNKK-ELENSYIFDIKTI 88
                         90       100
                 ....*....|....*....|....
gi 38683860  119 DEYFAVAAENEQEQEGWYRALTDL 142
Cdd:cd01266   89 DRIFYLVAETEEDMNKWVRNICDI 112
PH_Gab-like cd13324
Grb2-associated binding protein family Pleckstrin homology (PH) domain; Gab proteins are ...
35-141 9.98e-07

Grb2-associated binding protein family Pleckstrin homology (PH) domain; Gab proteins are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. There are 3 families: Gab1, Gab2, and Gab3. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270133  Cd Length: 112  Bit Score: 48.56  E-value: 9.98e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   35 GYLRKQKHGHK--------RFFVLRGpgaggdeatagGGSAPQPPRLEYYESEKKWRskagaPKRVIALDCC------LN 100
Cdd:cd13324    5 GWLTKSPPEKKiwraawrrRWFVLRS-----------GRLSGGQDVLEYYTDDHCKK-----LKGIIDLDQCeqvdagLT 68
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 38683860  101 INKRaDAKHKYLIALYTKDEYFAVAAENEQEQEGWYRALTD 141
Cdd:cd13324   69 FEKK-KFKNQFIFDIRTPKRTYYLVAETEEEMNKWVRCICQ 108
PH_DOCK-D cd13267
Dedicator of cytokinesis-D subfamily Pleckstrin homology (PH) domain; DOCK-D subfamily (also ...
45-139 1.18e-04

Dedicator of cytokinesis-D subfamily Pleckstrin homology (PH) domain; DOCK-D subfamily (also called Zizimin subfamily) consists of Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2. DOCK-D has a N-terminal DUF3398 domain, a PH-like domain, a Dock Homology Region 1, DHR1 (also called CZH1), a C2 domain, and a C-terminal DHR2 domain (also called CZH2). Zizimin1 is enriched in the brain, lung, and kidney; zizimin2 is found in B and T lymphocytes, and zizimin3 is enriched in brain, lung, spleen and thymus. Zizimin1 functions in autoinhibition and membrane targeting. Zizimin2 is an immune-related and age-regulated guanine nucleotide exchange factor, which facilitates filopodial formation through activation of Cdc42, which results in activation of cell migration. No function has been determined for Zizimin3 to date. The N-terminal half of zizimin1 binds to the GEF domain through three distinct areas, including CZH1, to inhibit the interaction with Cdc42. In addition its PH domain binds phosphoinositides and mediates zizimin1 membrane targeting. DOCK is a family of proteins involved in intracellular signalling networks. They act as guanine nucleotide exchange factors for small G proteins of the Rho family, such as Rac and Cdc42. There are 4 subfamilies of DOCK family proteins based on their sequence homology: A-D. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270087  Cd Length: 126  Bit Score: 43.08  E-value: 1.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   45 KRFFVLRgpgAGGDEATAgggsapqpprLEYYESEKKwrskaGAPKRVIALDCCLNI--NKRadaKHKYLIALYTKD-EY 121
Cdd:cd13267   33 RRFFHLK---QLVDGSYI----------LEFYKDEKK-----KEAKGTIFLDSCTGVvqNSK---RRKFCFELRMQDkKS 91
                         90
                 ....*....|....*...
gi 38683860  122 FAVAAENEQEQEGWYRAL 139
Cdd:cd13267   92 YVLAAESEAEMDEWISKL 109
PH_PLEKHD1 cd13281
Pleckstrin homology (PH) domain containing, family D (with coiled-coil domains) member 1 PH ...
31-139 5.40e-04

Pleckstrin homology (PH) domain containing, family D (with coiled-coil domains) member 1 PH domain; Human PLEKHD1 (also called UPF0639, pleckstrin homology domain containing, family D (with M protein repeats) member 1) is a single transcript and contains a single PH domain. PLEKHD1 is conserved in human, chimpanzee, , dog, cow, mouse, chicken, zebrafish, and Caenorhabditis elegans. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270099  Cd Length: 139  Bit Score: 41.54  E-value: 5.40e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   31 VRKCGYLRKQKHGH------KRFFVLRgpgaggdEATagggsapqpprLEYY-ESEKKWRSKAGA----PKRVIALDCCL 99
Cdd:cd13281   12 VQLHGILWKKPFGHqsakwsKRFFIIK-------EGF-----------LLYYsESEKKDFEKTRHfnihPKGVIPLGGCS 73
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 38683860  100 nINKRADAKHKYLIaLYTKDEYFA---VAAENEQEQEGWYRAL 139
Cdd:cd13281   74 -IEAVEDPGKPYAI-SISHSDFKGniiLAADSEFEQEKWLDML 114
PH_TAAP2-like cd13255
Tandem PH-domain-containing protein 2 Pleckstrin homology (PH) domain; The binding of TAPP2 ...
30-141 3.93e-03

Tandem PH-domain-containing protein 2 Pleckstrin homology (PH) domain; The binding of TAPP2 (also called PLEKHA2) adaptors to PtdIns(3,4)P(2), but not PI(3,4, 5)P3, function as negative regulators of insulin and PI3K signalling pathways (i.e. TAPP/utrophin/syntrophin complex). TAPP2 contains two sequential PH domains in which the C-terminal PH domain specifically binds PtdIns(3,4)P2 with high affinity. The N-terminal PH domain does not interact with any phosphoinositide tested. They also contain a C-terminal PDZ-binding motif that interacts with several PDZ-binding proteins, including PTPN13 (known previously as PTPL1 or FAP-1) as well as the scaffolding proteins MUPP1 (multiple PDZ-domain-containing protein 1), syntrophin and utrophin. The members here are most sequence similar to TAPP2 proteins, but may not be actual TAPP2 proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270075  Cd Length: 110  Bit Score: 38.55  E-value: 3.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   30 SVRKCGYLRKQ----KHGHKRFFVLRgpgaggdeatagggsapqPPRLEYYESEKKWRSKAGAPKRVIalDCCLNINKRa 105
Cdd:cd13255    5 AVLKAGYLEKKgerrKTWKKRWFVLR------------------PTKLAYYKNDKEYRLLRLIDLTDI--HTCTEVQLK- 63
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 38683860  106 daKHKYLIALYTKDEYFAVAAENEQEQEGWYRALTD 141
Cdd:cd13255   64 --KHDNTFGIVTPARTFYVQADSKAEMESWISAINL 97
PH1_PLEKHH1_PLEKHH2 cd13282
Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 ...
33-145 6.71e-03

Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; PLEKHH1 and PLEKHH2 (also called PLEKHH1L) are thought to function in phospholipid binding and signal transduction. There are 3 Human PLEKHH genes: PLEKHH1, PLEKHH2, and PLEKHH3. There are many isoforms, the longest of which contain a FERM domain, a MyTH4 domain, two PH domains, a peroximal domain, a vacuolar domain, and a coiled coil stretch. The FERM domain has a cloverleaf tripart structure (FERM_N, FERM_M, FERM_C/N, alpha-, and C-lobe/A-lobe, B-lobe, C-lobe/F1, F2, F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 241436  Cd Length: 96  Bit Score: 37.28  E-value: 6.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38683860   33 KCGYLRKQ----KHGHKRFFVLRGPgaggdeatagggsapqppRLEYYESEKKWRSKagaPKRVIALDCCLNINkRADAK 108
Cdd:cd13282    1 KAGYLTKLggkvKTWKRRWFVLKNG------------------ELFYYKSPNDVIRK---PQGQIALDGSCEIA-RAEGA 58
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 38683860  109 HKYLIAlyTKDEYFAVAAENEQEQEGWYRALTDLVSE 145
Cdd:cd13282   59 QTFEIV--TEKRTYYLTADSENDLDEWIRVIQNVLRR 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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