AP-2 complex subunit alpha is a large adaptin component of the adaptor protein complex 2 (AP-2), which functions in protein transport via transport vesicles in different membrane traffic pathways
Adaptin N terminal region; This family consists of the N terminal region of various alpha, ...
29-591
1.80e-180
Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and gamma subunits of the AP-1, AP-2 and AP-3 adaptor protein complexes. The adaptor protein (AP) complexes are involved in the formation of clathrin-coated pits and vesicles. The N-terminal region of the various adaptor proteins (APs) is constant by comparison to the C-terminal which is variable within members of the AP-2 family; and it has been proposed that this constant region interacts with another uniform component of the coated vesicles.
:
Pssm-ID: 396262 [Multi-domain] Cd Length: 523 Bit Score: 532.97 E-value: 1.80e-180
Alpha adaptin AP2, C-terminal domain; Alpha adaptin is a hetero tetramer which regulates ...
842-950
1.03e-57
Alpha adaptin AP2, C-terminal domain; Alpha adaptin is a hetero tetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site.
:
Pssm-ID: 426707 Cd Length: 113 Bit Score: 193.32 E-value: 1.03e-57
Adaptin C-terminal domain; Adaptins are components of the adaptor complexes which link ...
733-836
6.37e-22
Adaptin C-terminal domain; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Gamma-adaptin is a subunit of the golgi adaptor. Alpha adaptin is a heterotetramer that regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This Ig-fold domain is found in alpha, beta and gamma adaptins and consists of a beta-sandwich containing 7 strands in 2 beta-sheets in a greek-key topology.. The adaptor appendage contains an additional N-terminal strand.
:
Pssm-ID: 197886 [Multi-domain] Cd Length: 104 Bit Score: 91.54 E-value: 6.37e-22
Adaptin N terminal region; This family consists of the N terminal region of various alpha, ...
29-591
1.80e-180
Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and gamma subunits of the AP-1, AP-2 and AP-3 adaptor protein complexes. The adaptor protein (AP) complexes are involved in the formation of clathrin-coated pits and vesicles. The N-terminal region of the various adaptor proteins (APs) is constant by comparison to the C-terminal which is variable within members of the AP-2 family; and it has been proposed that this constant region interacts with another uniform component of the coated vesicles.
Pssm-ID: 396262 [Multi-domain] Cd Length: 523 Bit Score: 532.97 E-value: 1.80e-180
Alpha adaptin AP2, C-terminal domain; Alpha adaptin is a hetero tetramer which regulates ...
842-950
1.03e-57
Alpha adaptin AP2, C-terminal domain; Alpha adaptin is a hetero tetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site.
Pssm-ID: 426707 Cd Length: 113 Bit Score: 193.32 E-value: 1.03e-57
Adaptin C-terminal domain; Adaptins are components of the adaptor complexes which link ...
733-836
6.37e-22
Adaptin C-terminal domain; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Gamma-adaptin is a subunit of the golgi adaptor. Alpha adaptin is a heterotetramer that regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This Ig-fold domain is found in alpha, beta and gamma adaptins and consists of a beta-sandwich containing 7 strands in 2 beta-sheets in a greek-key topology.. The adaptor appendage contains an additional N-terminal strand.
Pssm-ID: 197886 [Multi-domain] Cd Length: 104 Bit Score: 91.54 E-value: 6.37e-22
Adaptin C-terminal domain; Alpha adaptin is a heterotetramer which regulates clathrin-bud ...
729-836
3.77e-21
Adaptin C-terminal domain; Alpha adaptin is a heterotetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This ig-fold domain is found in alpha, beta and gamma adaptins.
Pssm-ID: 460735 Cd Length: 111 Bit Score: 89.31 E-value: 3.77e-21
Adaptin N terminal region; This family consists of the N terminal region of various alpha, ...
29-591
1.80e-180
Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and gamma subunits of the AP-1, AP-2 and AP-3 adaptor protein complexes. The adaptor protein (AP) complexes are involved in the formation of clathrin-coated pits and vesicles. The N-terminal region of the various adaptor proteins (APs) is constant by comparison to the C-terminal which is variable within members of the AP-2 family; and it has been proposed that this constant region interacts with another uniform component of the coated vesicles.
Pssm-ID: 396262 [Multi-domain] Cd Length: 523 Bit Score: 532.97 E-value: 1.80e-180
Alpha adaptin AP2, C-terminal domain; Alpha adaptin is a hetero tetramer which regulates ...
842-950
1.03e-57
Alpha adaptin AP2, C-terminal domain; Alpha adaptin is a hetero tetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site.
Pssm-ID: 426707 Cd Length: 113 Bit Score: 193.32 E-value: 1.03e-57
Adaptin C-terminal domain; Adaptins are components of the adaptor complexes which link ...
733-836
6.37e-22
Adaptin C-terminal domain; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Gamma-adaptin is a subunit of the golgi adaptor. Alpha adaptin is a heterotetramer that regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This Ig-fold domain is found in alpha, beta and gamma adaptins and consists of a beta-sandwich containing 7 strands in 2 beta-sheets in a greek-key topology.. The adaptor appendage contains an additional N-terminal strand.
Pssm-ID: 197886 [Multi-domain] Cd Length: 104 Bit Score: 91.54 E-value: 6.37e-22
Adaptin C-terminal domain; Alpha adaptin is a heterotetramer which regulates clathrin-bud ...
729-836
3.77e-21
Adaptin C-terminal domain; Alpha adaptin is a heterotetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This ig-fold domain is found in alpha, beta and gamma adaptins.
Pssm-ID: 460735 Cd Length: 111 Bit Score: 89.31 E-value: 3.77e-21
Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
References:
Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
of the residues that compose this conserved feature have been mapped to the query sequence.
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Functional characterization of the conserved domain architecture found on the query.
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This image shows a graphical summary of conserved domains identified on the query sequence.
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if a domain or superfamily has been annotated with functional sites (conserved features),
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The table lists conserved domains identified on the query sequence. Click on the plus sign (+) on the left to display full descriptions, alignments, and scores.
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Concise Display shows only the best scoring domain model, in each hit category listed below except non-specific hits, for each region on the query sequence.
(labeled illustration) Standard Display shows only the best scoring domain model from each source, in each hit category listed below for each region on the query sequence.
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specific hits meet or exceed a domain-specific e-value threshold
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and represent a very high confidence that the query sequence belongs to the same protein family as the sequences use to create the domain model
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Retrieve proteins that contain one or more of the domains present in the query sequence, using the Conserved Domain Architecture Retrieval Tool
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