NECAP PHear domain-containing protein [Caenorhabditis elegans]
PH domain-containing protein( domain architecture ID 106840)
Pleckstrin homology (PH) domain-containing protein may be involved in targeting a protein to the appropriate cellular location or interacting with a binding partner
List of domain hits
Name | Accession | Description | Interval | E-value | ||
DUF1681 super family | cl47996 | Protein of unknown function (DUF1681); This family is composed of sequences derived from a ... |
4-61 | 1.61e-27 | ||
Protein of unknown function (DUF1681); This family is composed of sequences derived from a number of hypothetical eukaryotic proteins of unknown function. The actual alignment was detected with superfamily member pfam07933: Pssm-ID: 462320 Cd Length: 157 Bit Score: 96.42 E-value: 1.61e-27
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Name | Accession | Description | Interval | E-value | ||
DUF1681 | pfam07933 | Protein of unknown function (DUF1681); This family is composed of sequences derived from a ... |
4-61 | 1.61e-27 | ||
Protein of unknown function (DUF1681); This family is composed of sequences derived from a number of hypothetical eukaryotic proteins of unknown function. Pssm-ID: 462320 Cd Length: 157 Bit Score: 96.42 E-value: 1.61e-27
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PHear_NECAP | cd13228 | NECAP (adaptin-ear-binding coat-associated protein) Plextrin Homology (PH) fold with ear-like ... |
7-61 | 2.14e-26 | ||
NECAP (adaptin-ear-binding coat-associated protein) Plextrin Homology (PH) fold with ear-like function (PHear) domain; NECAPs are alpha-ear-binding proteins that enrich on clathrin-coated vesicles (CCVs). NECAP 1 is expressed in brain and non-neuronal tissues and cells while NECAP 2 is ubiquitously expressed. The PH-like domain of NECAPs is a protein-binding interface that mimics the FxDxF motif binding properties of the alpha-ear and is called PHear (PH fold with ear-like function) domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Pssm-ID: 270048 Cd Length: 120 Bit Score: 92.62 E-value: 2.14e-26
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Name | Accession | Description | Interval | E-value | ||
DUF1681 | pfam07933 | Protein of unknown function (DUF1681); This family is composed of sequences derived from a ... |
4-61 | 1.61e-27 | ||
Protein of unknown function (DUF1681); This family is composed of sequences derived from a number of hypothetical eukaryotic proteins of unknown function. Pssm-ID: 462320 Cd Length: 157 Bit Score: 96.42 E-value: 1.61e-27
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PHear_NECAP | cd13228 | NECAP (adaptin-ear-binding coat-associated protein) Plextrin Homology (PH) fold with ear-like ... |
7-61 | 2.14e-26 | ||
NECAP (adaptin-ear-binding coat-associated protein) Plextrin Homology (PH) fold with ear-like function (PHear) domain; NECAPs are alpha-ear-binding proteins that enrich on clathrin-coated vesicles (CCVs). NECAP 1 is expressed in brain and non-neuronal tissues and cells while NECAP 2 is ubiquitously expressed. The PH-like domain of NECAPs is a protein-binding interface that mimics the FxDxF motif binding properties of the alpha-ear and is called PHear (PH fold with ear-like function) domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Pssm-ID: 270048 Cd Length: 120 Bit Score: 92.62 E-value: 2.14e-26
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Blast search parameters | ||||
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