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Conserved domains on  [gi|1845970268|ref|NP_001370527|]
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ATP synthase subunit O, mitochondrial [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 30-203 5.69e-54

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


:

Pssm-ID: 459714  Cd Length: 172  Bit Score: 170.01  E-value: 5.69e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  30 VEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAEN 109
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFKGL-LSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 110 GRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKsGQKLTVTYAVKPSILGGLVVTIGDKYVD 189
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTG-KKKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 1845970268 190 LSIASRVKKYKDAL 203
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 30-203 5.69e-54

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 170.01  E-value: 5.69e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  30 VEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAEN 109
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFKGL-LSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 110 GRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKsGQKLTVTYAVKPSILGGLVVTIGDKYVD 189
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTG-KKKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 1845970268 190 LSIASRVKKYKDAL 203
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 29-204 8.35e-47

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 151.85  E-value: 8.35e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  29 GVEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAE 108
Cdd:COG0712     5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAENPELRALLSSPVISAEEKKELLEALFGGK-LSPETLNFLKLLVE 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 109 NGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYV 188
Cdd:COG0712    84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEK--KTGKKVELNVKVDPSLIGGVVVRVGDKVI 161

                         170
                  ....*....|....*.
gi 1845970268 189 DLSIASRVKKYKDALA 204
Cdd:COG0712   162 DGSVRGRLNRLRRALK 177
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 33-204 1.10e-40

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 136.45  E-value: 1.10e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  33 RYAAALYSAGHKQNKLDQISTDLNnVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTklGLTKETGNFLGLLAENGRL 112
Cdd:PRK05758   10 PYAKALFEVALEKGSLDAWSEELT-FLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFK--SLSEYVQNFLKVLAENGRL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 113 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSI 192
Cdd:PRK05758   87 ALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEK--RLGRKVKLNEKVDPSLIGGVIIKVGDRVIDGSV 164

                         170
                  ....*....|..
gi 1845970268 193 ASRVKKYKDALA 204
Cdd:PRK05758  165 RGKLERLKDALK 176
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 33-203 3.37e-29

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 106.63  E-value: 3.37e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  33 RYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAIsTKLGLTKETGNFLGLLAENGRL 112
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLSNPLISAEKKKEFIKNV-FGEQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 113 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKSgQKLTVTYAVKPSILGGLVVTIGDKYVDLSI 192
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGA-AKVKLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 1845970268 193 ASRVKKYKDAL 203
Cdd:TIGR01145 162 RGQLKRLSRQL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 30-203 5.69e-54

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 170.01  E-value: 5.69e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  30 VEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAEN 109
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFKGL-LSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 110 GRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKsGQKLTVTYAVKPSILGGLVVTIGDKYVD 189
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTG-KKKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 1845970268 190 LSIASRVKKYKDAL 203
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 29-204 8.35e-47

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 151.85  E-value: 8.35e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  29 GVEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAE 108
Cdd:COG0712     5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAENPELRALLSSPVISAEEKKELLEALFGGK-LSPETLNFLKLLVE 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 109 NGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYV 188
Cdd:COG0712    84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEK--KTGKKVELNVKVDPSLIGGVVVRVGDKVI 161

                         170
                  ....*....|....*.
gi 1845970268 189 DLSIASRVKKYKDALA 204
Cdd:COG0712   162 DGSVRGRLNRLRRALK 177
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 33-204 1.10e-40

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 136.45  E-value: 1.10e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  33 RYAAALYSAGHKQNKLDQISTDLNnVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTklGLTKETGNFLGLLAENGRL 112
Cdd:PRK05758   10 PYAKALFEVALEKGSLDAWSEELT-FLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFK--SLSEYVQNFLKVLAENGRL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 113 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSI 192
Cdd:PRK05758   87 ALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEK--RLGRKVKLNEKVDPSLIGGVIIKVGDRVIDGSV 164

                         170
                  ....*....|..
gi 1845970268 193 ASRVKKYKDALA 204
Cdd:PRK05758  165 RGKLERLKDALK 176
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 33-204 4.83e-39

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 132.25  E-value: 4.83e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  33 RYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLGLTKETGNFLGLLAENGRL 112
Cdd:PRK13429    9 RYAKALFQLAKEKGQLDSVYEELKQLAELLEDSPELRDALSNPVLSAEEKKAVLEKLLGKLKVSPEVLNFLKLLADRRRL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 113 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIgkSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSI 192
Cdd:PRK13429   89 GILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKM--TGKKVELDTAVDPSLIGGVVVKIGDKVLDASV 166

                         170
                  ....*....|..
gi 1845970268 193 ASRVKKYKDALA 204
Cdd:PRK13429  167 RTQLRRLKETLK 178
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 33-203 3.37e-29

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 106.63  E-value: 3.37e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  33 RYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAIsTKLGLTKETGNFLGLLAENGRL 112
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLSNPLISAEKKKEFIKNV-FGEQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 113 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKSgQKLTVTYAVKPSILGGLVVTIGDKYVDLSI 192
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGA-AKVKLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 1845970268 193 ASRVKKYKDAL 203
Cdd:TIGR01145 162 RGQLKRLSRQL 172
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 34-198 2.97e-21

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 86.58  E-value: 2.97e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  34 YAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAENGRLN 113
Cdd:CHL00119   12 YAEALLEFAKEKNIMEQITADIQLILTFLNESPELKKFLANPLISKNAKKEVIKKTFGSQ-INENTLKFLMVLVDRGRIA 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 114 KLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKSGQ-KLTVTyaVKPSILGGLVVTIGDKYVDLSI 192
Cdd:CHL00119   91 LLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNAKEiKLVIT--VDPSLIGGFLIKIGSKVIDTSI 168


                  ....*.
gi 1845970268 193 ASRVKK 198
Cdd:CHL00119  169 KGQLKQ 174
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 30-198 6.56e-14

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 66.70  E-value: 6.56e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  30 VEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKdnkKFQEFVLDPTLKANKKKTAIEAISTKLG--LTKETGNFLGLLA 107
Cdd:PRK13441    6 IASKYARALLNVAIELEKEEEYGEFLDLVCQIYE---SAKEFFDNPIVKPEKKVSLIKEIMKEFGqeMDEFFENFLNLVF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 108 ENGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKSGQKLTVTyaVKPSILGGLVVTIGDKY 187
Cdd:PRK13441   83 ENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPVFEET--IDESLIAGAVVEFEGKR 160

                         170
                  ....*....|.
gi 1845970268 188 VDLSIASRVKK 198
Cdd:PRK13441  161 LDVTVQGRLKK 171
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 36-205 4.23e-13

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 66.12  E-value: 4.23e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  36 AALYSAgHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEA-ISTKLglTKETGNFLGLLAENGRLNK 114
Cdd:PRK13430  106 ALLASA-EAQGALDDVEDELFRLGRILASNPELRLALSDRAAPAEAKRELLARlLYGKV--TPVTERLAEQAVGRPRGRS 182

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 115 LESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIgkSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIAS 194
Cdd:PRK13430  183 IEEGLDELSNLAAARRGRSVATVTTAVPLSDEQKQRLAAALSRI--YGRPVHLNSEVDPSVLGGMRVQVGDEVIDGSVAG 260

                         170
                  ....*....|.
gi 1845970268 195 RVKKYKDALAT 205
Cdd:PRK13430  261 RLERLRRRLAG 271
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 116-203 8.37e-12

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 63.21  E-value: 8.37e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 116 ESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIgkSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIASR 195
Cdd:PRK13428  358 EEAVLFLAELAVARRGEVVAQVSAAAELSDAQRTRLTEVLSRI--YGRPVSVQLHIDPELLGGLSIAVGDEVIDGTLSSR 435


                  ....*...
gi 1845970268 196 VKKYKDAL 203
Cdd:PRK13428  436 LAAAEAQL 443
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 29-203 5.55e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 59.18  E-value: 5.55e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  29 GVEGRYAAALYSAGhkqNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLK-ANKKKTAIEAISTKLglTKETGNFLGLLA 107
Cdd:PRK13434    5 GVSKVYASALLGAA---NSPEEVEQELGDLVQLLFKDEKIRNFFLSPTVSpEEKEQTLAKNLRGKI--SDITLNFLGVLL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 108 ENGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKY 187
Cdd:PRK13434   80 NKGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSE--KFKSEFILEVSEDKNLLGGFVVQFNDLK 157

                         170
                  ....*....|....*.
gi 1845970268 188 VDLSIASRVKKYKDAL 203
Cdd:PRK13434  158 IEKSIASQLGEIKKAM 173
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 34-200 1.17e-08

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 52.36  E-value: 1.17e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  34 YAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKlGLTKETGNFLGLLAENGRLN 113
Cdd:PRK13436   11 YAEALFDIANEENNVEKYINEVFKIIEILKNNKDLIKLLTSYFIDKEEKFKIIDKIFSA-KIDIYLVNFLKILAKNNLFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268 114 KLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIA 193
Cdd:PRK13436   90 YIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSK--KLNKKVHLVNKIDPKLIAGIKIKVDNKVFENSIK 167


                  ....*..
gi 1845970268 194 SRVKKYK 200
Cdd:PRK13436  168 SKLKELK 174
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 33-157 3.31e-08

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 51.13  E-value: 3.31e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845970268  33 RYAAALySAGHKQNKLDQISTDLNNVRSVYKDnKKFQEFVLDPTLKANKKKTAIEAISTKLGltKETGNFLGLLAENGRL 112
Cdd:PRK08474    8 RYAKAL-LSSLSSDELNDIYSNLKILSSAFAD-EKFKEIISSPEISKEQKIEFLLSFVDNAN--AKFQNFIKLLAENKRL 83

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1845970268 113 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSK 157
Cdd:PRK08474   84 ELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSK 128
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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