NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1840874171|ref|NP_001369425|]
View 

sperm-egg fusion protein LLCFC1 precursor [Homo sapiens]

Protein Classification

LLLL and CFNLAS motif-containing protein 1( domain architecture ID 11239435)

LLLL and CFNLAS motif-containing protein 1 (LLCFC1) is a DUF4717 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
LLCFC1 pfam15838
LLLL and CFNLAS motif-containing protein 1; LLCFC1 (also known as SOF1) and its homologs can ...
 31-102 2.88e-46

LLLL and CFNLAS motif-containing protein 1; LLCFC1 (also known as SOF1) and its homologs can be found in eukaryotes. They have two conserved sequence motifs: LLLL and CFNLAS. LLCFC1 is a sperm protein required for sperm-oocyte fusion in mice.


:

Pssm-ID: 464903  Cd Length: 72  Bit Score: 143.79  E-value: 2.88e-46
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1840874171  31 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSKTAAVHKHSFHLSFCFSLASVMVF 102
Cdd:pfam15838   1 GPDERSQKEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDTTSKAAAVRDHLFDLAFCFNLASIMVF 72
 
Name Accession Description Interval E-value
LLCFC1 pfam15838
LLLL and CFNLAS motif-containing protein 1; LLCFC1 (also known as SOF1) and its homologs can ...
 31-102 2.88e-46

LLLL and CFNLAS motif-containing protein 1; LLCFC1 (also known as SOF1) and its homologs can be found in eukaryotes. They have two conserved sequence motifs: LLLL and CFNLAS. LLCFC1 is a sperm protein required for sperm-oocyte fusion in mice.


Pssm-ID: 464903  Cd Length: 72  Bit Score: 143.79  E-value: 2.88e-46
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1840874171  31 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSKTAAVHKHSFHLSFCFSLASVMVF 102
Cdd:pfam15838   1 GPDERSQKEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDTTSKAAAVRDHLFDLAFCFNLASIMVF 72
 
Name Accession Description Interval E-value
LLCFC1 pfam15838
LLLL and CFNLAS motif-containing protein 1; LLCFC1 (also known as SOF1) and its homologs can ...
 31-102 2.88e-46

LLLL and CFNLAS motif-containing protein 1; LLCFC1 (also known as SOF1) and its homologs can be found in eukaryotes. They have two conserved sequence motifs: LLLL and CFNLAS. LLCFC1 is a sperm protein required for sperm-oocyte fusion in mice.


Pssm-ID: 464903  Cd Length: 72  Bit Score: 143.79  E-value: 2.88e-46
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1840874171  31 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSKTAAVHKHSFHLSFCFSLASVMVF 102
Cdd:pfam15838   1 GPDERSQKEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDTTSKAAAVRDHLFDLAFCFNLASIMVF 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH