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Conserved domains on  [gi|1831512251|ref|NP_001368277|]
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DNA_pol_B_exo1 domain-containing protein [Caenorhabditis elegans]

Protein Classification

TUSC2 domain-containing protein( domain architecture ID 10633205)

TUSC2 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TUSC2 pfam15000
Tumour suppressor candidate 2; This family of proteins are candidate tumour suppressors.
 1-83 2.82e-41

Tumour suppressor candidate 2; This family of proteins are candidate tumour suppressors.


:

Pssm-ID: 464434  Cd Length: 111  Bit Score: 130.97  E-value: 2.82e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831512251   1 MIAKYAEVLKTRGILPeyfLVHEAKSSQYIDEDGDVANEFYQE-TMSDGEKRRLCRLMKNLRPKGKERYAIPRLKHDIPV 79
Cdd:pfam15000  31 AEQALARARGTRGATP---FVFTRRGSMYFDEDGDLAHEFYEEvTKNGGKKAKLRRIQKNLRPQGTVKLDHPRLHVDFPV 107


                  ....
gi 1831512251  80 VIWE 83
Cdd:pfam15000 108 VLCE 111
 
Name Accession Description Interval E-value
TUSC2 pfam15000
Tumour suppressor candidate 2; This family of proteins are candidate tumour suppressors.
 1-83 2.82e-41

Tumour suppressor candidate 2; This family of proteins are candidate tumour suppressors.


Pssm-ID: 464434  Cd Length: 111  Bit Score: 130.97  E-value: 2.82e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831512251   1 MIAKYAEVLKTRGILPeyfLVHEAKSSQYIDEDGDVANEFYQE-TMSDGEKRRLCRLMKNLRPKGKERYAIPRLKHDIPV 79
Cdd:pfam15000  31 AEQALARARGTRGATP---FVFTRRGSMYFDEDGDLAHEFYEEvTKNGGKKAKLRRIQKNLRPQGTVKLDHPRLHVDFPV 107


                  ....
gi 1831512251  80 VIWE 83
Cdd:pfam15000 108 VLCE 111
 
Name Accession Description Interval E-value
TUSC2 pfam15000
Tumour suppressor candidate 2; This family of proteins are candidate tumour suppressors.
 1-83 2.82e-41

Tumour suppressor candidate 2; This family of proteins are candidate tumour suppressors.


Pssm-ID: 464434  Cd Length: 111  Bit Score: 130.97  E-value: 2.82e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831512251   1 MIAKYAEVLKTRGILPeyfLVHEAKSSQYIDEDGDVANEFYQE-TMSDGEKRRLCRLMKNLRPKGKERYAIPRLKHDIPV 79
Cdd:pfam15000  31 AEQALARARGTRGATP---FVFTRRGSMYFDEDGDLAHEFYEEvTKNGGKKAKLRRIQKNLRPQGTVKLDHPRLHVDFPV 107


                  ....
gi 1831512251  80 VIWE 83
Cdd:pfam15000 108 VLCE 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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