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Conserved domains on  [gi|1799133389|ref|NP_001364611|]
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PAW domain-containing protein [Caenorhabditis elegans]

Protein Classification

PAW domain-containing protein( domain architecture ID 10652287)

PAW domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PAW smart00613
domain present in PNGases and other hypothetical proteins; present in several copies in ...
114-200 9.27e-38

domain present in PNGases and other hypothetical proteins; present in several copies in proteins with unknown function in C. elegans


:

Pssm-ID: 214745  Cd Length: 89  Bit Score: 128.54  E-value: 9.27e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799133389  114 SGDNYVKFTYNVISNTYSQTHEDGSKIDSFYVFNIERVEDRSLNQVYLRKRNTLFMGS-ITWQFIWELVGKSIEKIVIKI 192
Cdd:smart00613   2 SGENYVKFTYDIINDTYSHTNEDGSPVQPYEVKNIERVVDKELNEVYLHKKRPEEEGNyIYWKFDLKSTGKSVEKVVIRM 81

                   ....*...
gi 1799133389  193 AGIEEYLK 200
Cdd:smart00613  82 SGIEEIAN 89
 
Name Accession Description Interval E-value
PAW smart00613
domain present in PNGases and other hypothetical proteins; present in several copies in ...
114-200 9.27e-38

domain present in PNGases and other hypothetical proteins; present in several copies in proteins with unknown function in C. elegans


Pssm-ID: 214745  Cd Length: 89  Bit Score: 128.54  E-value: 9.27e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799133389  114 SGDNYVKFTYNVISNTYSQTHEDGSKIDSFYVFNIERVEDRSLNQVYLRKRNTLFMGS-ITWQFIWELVGKSIEKIVIKI 192
Cdd:smart00613   2 SGENYVKFTYDIINDTYSHTNEDGSPVQPYEVKNIERVVDKELNEVYLHKKRPEEEGNyIYWKFDLKSTGKSVEKVVIRM 81

                   ....*...
gi 1799133389  193 AGIEEYLK 200
Cdd:smart00613  82 SGIEEIAN 89
 
Name Accession Description Interval E-value
PAW smart00613
domain present in PNGases and other hypothetical proteins; present in several copies in ...
114-200 9.27e-38

domain present in PNGases and other hypothetical proteins; present in several copies in proteins with unknown function in C. elegans


Pssm-ID: 214745  Cd Length: 89  Bit Score: 128.54  E-value: 9.27e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799133389  114 SGDNYVKFTYNVISNTYSQTHEDGSKIDSFYVFNIERVEDRSLNQVYLRKRNTLFMGS-ITWQFIWELVGKSIEKIVIKI 192
Cdd:smart00613   2 SGENYVKFTYDIINDTYSHTNEDGSPVQPYEVKNIERVVDKELNEVYLHKKRPEEEGNyIYWKFDLKSTGKSVEKVVIRM 81

                   ....*...
gi 1799133389  193 AGIEEYLK 200
Cdd:smart00613  82 SGIEEIAN 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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