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Conserved domains on  [gi|1767294009|ref|NP_001362141|]
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Fibronectin type-III domain-containing protein [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK12323 super family cl46901
DNA polymerase III subunit gamma/tau;
259-345 8.70e-08

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK14950:

Pssm-ID: 481241 [Multi-domain]  Cd Length: 585  Bit Score: 55.97  E-value: 8.70e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 259 VPPTPKSAAPSEVPPTPksaAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPP----TPKSAVPSEAPPTPRSAAPSDV--- 331
Cdd:PRK14950  367 QPAKPTAAAPSPVRPTP---APSTRPKAAAAANIPPKEPVRETATPPPVPPrpvaPPVPHTPESAPKLTRAAIPVDEkpk 443

                          90
                  ....*....|....*..
gi 1767294009 332 ---PPTPKSNGHIANGS 345
Cdd:PRK14950  444 ytpPAPPKEEEKALIAD 460
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 211-409 1.34e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 55.71  E-value: 1.34e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  211 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVP---PTP------------ 275
Cdd:PHA03247  2591 APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPrddPAPgrvsrprrarrl 2670

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  276 --------------KSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEA----PPTPRSAAPSDVPPTPKS 337
Cdd:PHA03247  2671 graaqassppqrprRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAArqasPALPAAPAPPAVPAGPAT 2750

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294009  338 NGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEETPATPRSSVPATPTES 409
Cdd:PHA03247  2751 PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAA 2822
 
Name Accession Description Interval E-value
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 259-345 8.70e-08

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 55.97  E-value: 8.70e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 259 VPPTPKSAAPSEVPPTPksaAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPP----TPKSAVPSEAPPTPRSAAPSDV--- 331
Cdd:PRK14950  367 QPAKPTAAAPSPVRPTP---APSTRPKAAAAANIPPKEPVRETATPPPVPPrpvaPPVPHTPESAPKLTRAAIPVDEkpk 443

                          90
                  ....*....|....*..
gi 1767294009 332 ---PPTPKSNGHIANGS 345
Cdd:PRK14950  444 ytpPAPPKEEEKALIAD 460
PHA03247 PHA03247
large tegument protein UL36; Provisional
 211-409 1.34e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 55.71  E-value: 1.34e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  211 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVP---PTP------------ 275
Cdd:PHA03247  2591 APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPrddPAPgrvsrprrarrl 2670

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  276 --------------KSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEA----PPTPRSAAPSDVPPTPKS 337
Cdd:PHA03247  2671 graaqassppqrprRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAArqasPALPAAPAPPAVPAGPAT 2750

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294009  338 NGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEETPATPRSSVPATPTES 409
Cdd:PHA03247  2751 PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAA 2822
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 209-351 8.67e-05

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 46.45  E-value: 8.67e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 209 LQAPPEGKRPRTPNDLDNPTadeePAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPK 288
Cdd:pfam05109 458 LTAPASTGPTVSTADVTSPT----PAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPN 533

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 289 SAAPSEVPLTPKSAAQSSVP-----------PTPKSAVPS---------EAPPTPRSAAPSDVPPTPKSNghIANGSIPG 348
Cdd:pfam05109 534 ATSPTLGKTSPTSAVTTPTPnatsptpavttPTPNATIPTlgktsptsaVTTPTPNATSPTVGETSPQAN--TTNHTLGG 611


                  ...
gi 1767294009 349 TPS 351
Cdd:pfam05109 612 TSS 614
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 212-338 2.42e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 41.29  E-value: 2.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 212 PPEGKRPRTPNDLDnPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPTPKSAA 291
Cdd:NF040712  200 ATVPRLAREPADAR-PEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGP--GAAPAAEPDEATRD 276

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1767294009 292 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSN 338
Cdd:NF040712  277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 204-344 3.92e-03

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 40.77  E-value: 3.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 204 KQEFELqAPPEGKRPRTPNDLDNPTADEEpAAELEADAGSEVPPTPKTAASE-KQSVPPTPKSAAPSEVPPTPkSAAPSE 282
Cdd:NF033838  352 EAELEL-VKEEAKEPRNEEKIKQAKAKVE-SKKAEATRLEKIKTDRKKAEEEaKRKAAEEDKVKEKPAEQPQP-APAPQP 428

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767294009 283 VPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA------VPSEAPPTPRSAAPsdvPPTPKSNGHIANG 344
Cdd:NF033838  429 EKPAPKPEKPAEQPKAEKPADQQAEEDYARRSeeeynrLTQQQPPKTEKPAQ---PSTPKTGWKQENG 493
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 249-330 6.80e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 39.88  E-value: 6.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 249 PKTAASEKQSVPPTPKSAapsevpPTPKSAAPseVPPTPKSAAPsevpltPKSAAQSSVPPTPKSAVPSEAPPTPRSAAP 328
Cdd:TIGR00601  77 PKTGTGKVAPPAATPTSA------PTPTPSPP--ASPASGMSAA------PASAVEEKSPSEESATATAPESPSTSVPSS 142


                  ..
gi 1767294009 329 SD 330
Cdd:TIGR00601 143 GS 144
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
266-337 6.81e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.37  E-value: 6.81e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294009 266 AAPSEVPPTPKSAAPsEVPPTPKSAAPSEVPlTPKSAAQSSVPPTPKSAVPsEAPPTPRSAAPSDVPPTPKS 337
Cdd:COG5373    38 AEAAEAASAPAEPEP-EAAAAATAAAPEAAP-APVPEAPAAPPAAAEAPAP-AAAAPPAEAEPAAAPAAASS 106
 
Name Accession Description Interval E-value
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 259-345 8.70e-08

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 55.97  E-value: 8.70e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 259 VPPTPKSAAPSEVPPTPksaAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPP----TPKSAVPSEAPPTPRSAAPSDV--- 331
Cdd:PRK14950  367 QPAKPTAAAPSPVRPTP---APSTRPKAAAAANIPPKEPVRETATPPPVPPrpvaPPVPHTPESAPKLTRAAIPVDEkpk 443

                          90
                  ....*....|....*..
gi 1767294009 332 ---PPTPKSNGHIANGS 345
Cdd:PRK14950  444 ytpPAPPKEEEKALIAD 460
PHA03247 PHA03247
large tegument protein UL36; Provisional
 211-409 1.34e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 55.71  E-value: 1.34e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  211 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVP---PTP------------ 275
Cdd:PHA03247  2591 APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPrddPAPgrvsrprrarrl 2670

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  276 --------------KSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEA----PPTPRSAAPSDVPPTPKS 337
Cdd:PHA03247  2671 graaqassppqrprRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAArqasPALPAAPAPPAVPAGPAT 2750

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294009  338 NGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEETPATPRSSVPATPTES 409
Cdd:PHA03247  2751 PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAA 2822
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
211-402 5.99e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 53.31  E-value: 5.99e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 211 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 290
Cdd:PRK07003  425 APPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATP 504

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 291 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSdvpptPKSNGHIANGSIPGTPSVAQESAKATPAATPAatat 370
Cdd:PRK07003  505 AAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPA-----ARAGGAAAALDVLRNAGMRVSSDRGARAAAAA---- 575

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1767294009 371 paatatpaatgtpKADTAFNFEETPATPRSSV 402
Cdd:PRK07003  576 -------------KPAAAPAAAPKPAAPRVAV 594
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 246-342 6.66e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 52.89  E-value: 6.66e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 246 PPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSaaqssvppTPKSAVPSEAPPTPRS 325
Cdd:PRK14950  363 VPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVA--------PPVPHTPESAPKLTRA 434

                          90       100
                  ....*....|....*....|..
gi 1767294009 326 AAPSDV-----PPTPKSNGHIA 342
Cdd:PRK14950  435 AIPVDEkpkytPPAPPKEEEKA 456
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 207-303 7.24e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 53.36  E-value: 7.24e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  207 FELQAPPEGKRPRTPndlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPT 286
Cdd:PRK12270    33 FADYGPGSTAAPTAA---AAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109

                           90
                   ....*....|....*..
gi 1767294009  287 PKSAAPSEVPLTPKSAA 303
Cdd:PRK12270   110 AAAVEDEVTPLRGAAAA 126
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
227-409 1.23e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 52.19  E-value: 1.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 227 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSA-APSEVPPTP---------KSAAPSEVPPTPKSAAPSEVP 296
Cdd:PRK12323  381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAaAPARRSPAPealaaarqaSARGPGGAPAPAPAPAAAPAA 460

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 297 LTPKSAAQSSVPPTPKSAVPS-EAPPTPRSAAPSDVPP---TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPA 372
Cdd:PRK12323  461 AARPAAAGPRPVAAAAAAAPArAAPAAAPAPADDDPPPweeLPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFET 540

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1767294009 373 ATATPAATGTPKADTAFNFEETPATPRSSVPATPTES 409
Cdd:PRK12323  541 LAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMF 577
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 252-337 1.44e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 52.02  E-value: 1.44e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 252 AASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPsevpltpksAAQSSVPPTPKSAVPSEAPPTPRSAAPSDV 331
Cdd:PRK14951  375 PAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPA---------APPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445


                  ....*.
gi 1767294009 332 PPTPKS 337
Cdd:PRK14951  446 ALAPAP 451
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 255-336 2.28e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 51.81  E-value: 2.28e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  255 EKQSVPPT---------PKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRS 325
Cdd:PRK12270    21 DPNSVDPSwreffadygPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP 100

                           90
                   ....*....|.
gi 1767294009  326 AAPSDVPPTPK 336
Cdd:PRK12270   101 AAAAAAAPAAA 111
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 224-325 2.52e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 51.43  E-value: 2.52e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  224 LDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPsevPPTPKSAAPSEVPLTPKSAA 303
Cdd:PRK12270    19 LADPNSVDPSWREFFADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP---AAAAPAAPPKPAAAAAAAAA 95

                           90       100
                   ....*....|....*....|..
gi 1767294009  304 QSSVPPTPKSAVPSEAPPTPRS 325
Cdd:PRK12270    96 PAAPPAAAAAAAPAAAAVEDEV 117
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 208-336 6.67e-06

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 50.07  E-value: 6.67e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 208 ELQAPPEGKRPRTPNDLD-----NPTADEEPAAELEADAGSEVPPTPKTAASEKQsvPPTPKSAAPSEVPPTPKSAAPSE 282
Cdd:PTZ00449  539 ESDEPKEGGKPGETKEGEvgkkpGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEE--PKKPKRPRSAQRPTRPKSPKLPE 616

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1767294009 283 VPPTPKSAAPSEVPLTPKSaaqssvPPTPKSAVPSEAPPTPRSAAPSDVPPTPK 336
Cdd:PTZ00449  617 LLDIPKSPKRPESPKSPKR------PPPPQRPSSPERPEGPKIIKSPKPPKSPK 664
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
230-406 6.85e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 49.87  E-value: 6.85e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 230 DEEPAAELEADAGSEVPPT--PKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLT----PKSAA 303
Cdd:PRK12323  371 GAGPATAAAAPVAQPAPAAaaPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASArgpgGAPAP 450

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 304 QSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTP------------SVAQESAKATPAATPAATATP 371
Cdd:PRK12323  451 APAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPpweelppefaspAPAQPDAAPAGWVAESIPDPA 530

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1767294009 372 AATATPAATGTPKADTAFNFEETPATPRSSVPATP 406
Cdd:PRK12323  531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
210-324 1.92e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 48.23  E-value: 1.92e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 210 QAPPEGKRPRTPNDLDNPtADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPkSAAPSEVPPTPKSAAPSEVPPTPKS 289
Cdd:PRK14971  364 QKGDDASGGRGPKQHIKP-VFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQS-ATQPAGTPPTVSVDPPAAVPVNPPS 441

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294009 290 AAPSEVPLTPKSAAQssvpPTPKSAVPSEAPPTPR 324
Cdd:PRK14971  442 TAPQAVRPAQFKEEK----KIPVSKVSSLGPSTLR 472
flhF PRK06995
flagellar biosynthesis protein FlhF;
229-335 2.86e-05

flagellar biosynthesis protein FlhF;


Pssm-ID: 235904 [Multi-domain]  Cd Length: 484  Bit Score: 47.65  E-value: 2.86e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 229 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPP--TPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS 306
Cdd:PRK06995   44 ADSDLAALAPPAAAAPAAAQPPPAAAPAAVSRPaaPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERA 123

                          90       100
                  ....*....|....*....|....*....
gi 1767294009 307 VPPTPKSAVPSEAPPTPRSAAPSDVPPTP 335
Cdd:PRK06995  124 AAENAARRLARAAAAAPRPRVPADAAAAV 152
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
123-329 4.16e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 47.54  E-value: 4.16e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 123 EPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVEEAPEAEETAPAEEPlievaveeapaeepvaeeaepea 202
Cdd:PRK07003  368 PGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAE----------------------- 424

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 203 ekqefelqAPPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSE 282
Cdd:PRK07003  425 --------APPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRA 496

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1767294009 283 VPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPS 329
Cdd:PRK07003  497 AAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPA 543
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 229-340 4.98e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 47.29  E-value: 4.98e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 229 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVP-PTPKSAAPSEVPPTPKSAAPSEVP---LTPKSAAQ 304
Cdd:PRK07764  390 GAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPaPAPAPAPPSPAGNAPAGGAPSPPPaaaPSAQPAPA 469

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1767294009 305 SSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGH 340
Cdd:PRK07764  470 PAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAG 505
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 263-355 6.34e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 46.63  E-value: 6.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 263 PKSAAPSEVPPTPKSAAPsevpptPKSAAPSEVPLTPKSAAQSSVPPTPKS-----AVPSEAPPTPRSAAPSDVPPTPKS 337
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPAR------PEAAAPAAAPVAQAAAAPAPAAAPAAAasapaAPPAAAPPAPVAAPAAAAPAAAPA 439

                          90
                  ....*....|....*...
gi 1767294009 338 NGHIANGSIPGTPSVAQE 355
Cdd:PRK14951  440 AAPAAVALAPAPPAQAAP 457
PRK10856 PRK10856
cytoskeleton protein RodZ;
252-335 6.46e-05

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 46.17  E-value: 6.46e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 252 AASEKQSVPPTPKSAAPSevPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS--VPPTPKSAVPSEAPPTPRSAAPS 329
Cdd:PRK10856  155 SQNSGQSVPLDTSTTTDP--ATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNavVAPSQANVDTAATPAPAAPATPD 232


                  ....*.
gi 1767294009 330 DVPPTP 335
Cdd:PRK10856  233 GAAPLP 238
PRK10856 PRK10856
cytoskeleton protein RodZ;
234-330 7.18e-05

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 45.79  E-value: 7.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 234 AAELEADAGSEVPPTPKTAASEKQ---SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPT 310
Cdd:PRK10856  151 SAELSQNSGQSVPLDTSTTTDPATtpaPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPAT 230

                          90       100
                  ....*....|....*....|
gi 1767294009 311 PKSAVPSEAPPTPRSAAPSD 330
Cdd:PRK10856  231 PDGAAPLPTDQAGVSTPAAD 250
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 209-351 8.67e-05

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 46.45  E-value: 8.67e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 209 LQAPPEGKRPRTPNDLDNPTadeePAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPK 288
Cdd:pfam05109 458 LTAPASTGPTVSTADVTSPT----PAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPN 533

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 289 SAAPSEVPLTPKSAAQSSVP-----------PTPKSAVPS---------EAPPTPRSAAPSDVPPTPKSNghIANGSIPG 348
Cdd:pfam05109 534 ATSPTLGKTSPTSAVTTPTPnatsptpavttPTPNATIPTlgktsptsaVTTPTPNATSPTVGETSPQAN--TTNHTLGG 611


                  ...
gi 1767294009 349 TPS 351
Cdd:pfam05109 612 TSS 614
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 210-323 9.08e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 46.25  E-value: 9.08e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 210 QAPPEGKRPRTPndldnPTADEEPAAeleADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKS 289
Cdd:PRK14951  385 EAAAPAAAPVAQ-----AAAAPAPAA---APAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAA 456

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1767294009 290 AAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTP 323
Cdd:PRK14951  457 PETVAIPVRVAPEPAVASAAPAPAAAPAAARLTP 490
PRK11633 PRK11633
cell division protein DedD; Provisional
 227-328 1.46e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.22  E-value: 1.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 227 PTADEEPAAELEADAGSEVPPTP-KTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPlTPKSAAQS 305
Cdd:PRK11633   45 PKPGDRDEPDMMPAATQALPTQPpEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKP-KPKPKPQQ 123

                          90       100
                  ....*....|....*....|...
gi 1767294009 306 SVPPTPKSAvPSEAPPTPRSAAP 328
Cdd:PRK11633  124 KVEAPPAPK-PEPKPVVEEKAAP 145
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
211-389 2.49e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.87  E-value: 2.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 211 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPK----TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPT 286
Cdd:PRK12323  390 AAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPApealAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGP 469

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 287 PKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTP-----KSNGHIANGSIPGTPSVAQESAKATP 361
Cdd:PRK12323  470 RPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPagwvaESIPDPATADPDDAFETLAPAPAAAP 549

                         170       180
                  ....*....|....*....|....*...
gi 1767294009 362 AATPAATATPAATATPAATGTPKADTAF 389
Cdd:PRK12323  550 APRAAAATEPVVAPRPPRASASGLPDMF 577
PLN02217 PLN02217
probable pectinesterase/pectinesterase inhibitor
 229-357 2.60e-04

probable pectinesterase/pectinesterase inhibitor


Pssm-ID: 215130 [Multi-domain]  Cd Length: 670  Bit Score: 44.69  E-value: 2.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 229 ADEE-----PAAELEADA---GSEVPPTPKTAASEKQSVPPTPK-SAAPSEVPPTPKSAAPSEVPPTpksaapsevplTP 299
Cdd:PLN02217  531 SDEEilkftPAQYIQGDAwipGKGVPYIPGLFAGNPGSTNSTPTgSAASSNTTFSSDSPSTVVAPST-----------SP 599

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1767294009 300 KSAAQSSVPPTPKSAV-PSEAPPTPRSAAPSDVPPTPKSNGHIAngsipGTPSVAQESA 357
Cdd:PLN02217  600 PAGHLGSPPATPSKIVsPSTSPPASHLGSPSTTPSSPESSIKVA-----STETASPESS 653
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 212-337 2.68e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 44.53  E-value: 2.68e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 212 PPEGKRPRtPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPsEVPPTPKSAA 291
Cdd:PLN03209  390 PPSSSPAS-SKSVDAVAKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTA-PTGVSPSVSS 467

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1767294009 292 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 337
Cdd:PLN03209  468 TSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPS 513
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
262-337 3.95e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 43.47  E-value: 3.95e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294009 262 TPKSAAPSEVPPTPKSAAPSEVPPTPKsaapsevPLTPKSAAQSSVPPTPKSAVPSEAP-PTPRSAAPSDVPPTPKS 337
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPSTK-------VEAPQSKPNATTPPSTKVEAPQQTPnATTPSSTKVETPQSPTT 92
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
241-337 4.19e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 44.00  E-value: 4.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 241 AGSEVPPTPKTAASEKqsvPPTPKSAAPsevPPTPKSAAPSevpPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAP 320
Cdd:PRK14971  365 KGDDASGGRGPKQHIK---PVFTQPAAA---PQPSAAAAAS---PSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAV 435

                          90
                  ....*....|....*...
gi 1767294009 321 PT-PRSAAPSDVPPTPKS 337
Cdd:PRK14971  436 PVnPPSTAPQAVRPAQFK 453
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 266-347 4.49e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 44.03  E-value: 4.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 266 AAPSEVPPTPKSAAPSEVPPTPksaAPSEvplTPKSAAQSSVPPT-PKSAVPSEAPPTPRSAAPSdVPPTPKSNGHIANG 344
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPTP---APST---RPKAAAAANIPPKePVRETATPPPVPPRPVAPP-VPHTPESAPKLTRA 434


                  ...
gi 1767294009 345 SIP 347
Cdd:PRK14950  435 AIP 437
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
233-335 5.01e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 43.61  E-value: 5.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 233 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTpk 312
Cdd:PRK14971  363 TQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPP-- 440

                          90       100
                  ....*....|....*....|...
gi 1767294009 313 SAVPSEAPPTPrsaAPSDVPPTP 335
Cdd:PRK14971  441 STAPQAVRPAQ---FKEEKKIPV 460
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 233-337 5.37e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 43.70  E-value: 5.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 233 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPK--SAAQSSVPPT 310
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKK 440

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294009 311 PKSAVPSEAPPTP--------RSAAPSDVPPTPKS 337
Cdd:PRK07994  441 SEPAAASRARPVNsalerlasVRPAPSALEKAPAK 475
flhF PRK06995
flagellar biosynthesis protein FlhF;
252-357 5.49e-04

flagellar biosynthesis protein FlhF;


Pssm-ID: 235904 [Multi-domain]  Cd Length: 484  Bit Score: 43.42  E-value: 5.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 252 AASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDV 331
Cdd:PRK06995   44 ADSDLAALAPPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERA 123

                          90       100
                  ....*....|....*....|....*..
gi 1767294009 332 -PPTPKSNGHIANGSIPGTPSVAQESA 357
Cdd:PRK06995  124 aAENAARRLARAAAAAPRPRVPADAAA 150
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 229-320 5.99e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 43.73  E-value: 5.99e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  229 ADEEPAAeleADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPP--TPKSAAPSEVPPTPKSAAPSevpltPKSAAQSS 306
Cdd:PRK12270    34 ADYGPGS---TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPaaAAPAAPPKPAAAAAAAAAPA-----APPAAAAA 105

                           90
                   ....*....|....
gi 1767294009  307 VPPTPKSAVPSEAP 320
Cdd:PRK12270   106 AAPAAAAVEDEVTP 119
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
226-335 6.55e-04

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 43.19  E-value: 6.55e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 226 NPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPltpksaaQS 305
Cdd:PRK13335   53 NITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTT-------ES 125

                          90       100       110
                  ....*....|....*....|....*....|
gi 1767294009 306 SVPPTPKSAVPSEAPPTPRSAAPSDVPPTP 335
Cdd:PRK13335  126 TTPKTKVTTPPSTNTPQPMQSTKSDTPQSP 155
PRK10856 PRK10856
cytoskeleton protein RodZ;
220-307 6.67e-04

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 42.71  E-value: 6.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 220 TPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPsevPLTP 299
Cdd:PRK10856  171 DPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAG---VSTP 247


                  ....*...
gi 1767294009 300 KSAAQSSV 307
Cdd:PRK10856  248 AADPNALV 255
PHA02682 PHA02682
ORF080 virion core protein; Provisional
 243-333 8.39e-04

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 42.16  E-value: 8.39e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 243 SEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSV---PPTPKSAVPSEA 319
Cdd:PHA02682   80 SPLAPSPACAAPAPACPACAPAAPAPAVTCPAPAPACPPATAPTCPPPAVCPAPARPAPACPPSTrqcPPAPPLPTPKPA 159

                          90
                  ....*....|....
gi 1767294009 320 PPTPRSAAPSDVPP 333
Cdd:PHA02682  160 PAAKPIFLHNQLPP 173
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 210-337 8.46e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 43.24  E-value: 8.46e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  210 QAPPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASE----KQSVPPTPKSAAPSEVPPTPK------SAA 279
Cdd:PHA03307    99 SPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPgpppAASPPAAGASPAAVASDAASSrqaalpLSS 178

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1767294009  280 PSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 337
Cdd:PHA03307   179 PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASS 236
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 226-308 8.48e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 43.34  E-value: 8.48e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  226 NPTADEEPAAELEADAGSEVPPTPKTAASEKQ-SVPPTPKSAAPSeVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQ 304
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAaPAPAPPAAAAPA-APPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115


                   ....
gi 1767294009  305 SSVP 308
Cdd:PRK12270   116 EVTP 119
PRK11633 PRK11633
cell division protein DedD; Provisional
 227-322 8.78e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 41.91  E-value: 8.78e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 227 PTADEEPAAElEADAGSEVPPT--PKTAASEKQSVPPTPKSAAPSEVPPTPKsaapseVPPTPKSAAPSEVPLTPKsaaq 304
Cdd:PRK11633   64 PTQPPEGAAE-AVRAGDAAAPSldPATVAPPNTPVEPEPAPVEPPKPKPVEK------PKPKPKPQQKVEAPPAPK---- 132

                          90
                  ....*....|....*...
gi 1767294009 305 ssvpPTPKSAVPSEAPPT 322
Cdd:PRK11633  133 ----PEPKPVVEEKAAPT 146
PRK14954 PRK14954
DNA polymerase III subunits gamma and tau; Provisional
 266-339 9.11e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184918 [Multi-domain]  Cd Length: 620  Bit Score: 43.01  E-value: 9.11e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767294009 266 AAPSEVPPTPKSAAPSEVPPTPKSAAPSEvplTPKSAAQSSVPPTPKSA-VPSEAPPTPRSA----APSDVPPTPKSNG 339
Cdd:PRK14954  382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAK---PEAPGARPAELPSPASApTPEQQPPVARSAplppSPQASAPRNVASG 457
PHA03247 PHA03247
large tegument protein UL36; Provisional
 248-337 9.71e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.39  E-value: 9.71e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  248 TPKTAASEKQSVPPTPKSAAP------SEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPP 321
Cdd:PHA03247   374 HPKRASLPTRKRRSARHAATPfargpgGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQ 453

                           90
                   ....*....|....*.
gi 1767294009  322 TPRSAAPSDVPPTPKS 337
Cdd:PHA03247   454 PPAPATEPAPDDPDDA 469
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 251-358 9.94e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 42.93  E-value: 9.94e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 251 TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSD 330
Cdd:PRK07994  367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAA 446

                          90       100
                  ....*....|....*....|....*...
gi 1767294009 331 VPPTPKSNGHIANGSIPGTPSVAQESAK 358
Cdd:PRK07994  447 SRARPVNSALERLASVRPAPSALEKAPA 474
PHA03247 PHA03247
large tegument protein UL36; Provisional
 211-357 1.12e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.00  E-value: 1.12e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  211 APPEGKRPRTPNDLDNPTADEEPAAELEADAG--SEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAA--PSEVPPT 286
Cdd:PHA03247  2829 PPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFAlpPDQPERP 2908

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767294009  287 PKSAAPSE--VPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAA---PSDVPPTPKsNGHIANGSIPGTPSVAQESA 357
Cdd:PHA03247  2909 PQPQAPPPpqPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGagePSGAVPQPW-LGALVPGRVAVPRFRVPQPA 2983
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
237-321 1.22e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 42.64  E-value: 1.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 237 LEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVP 316
Cdd:PRK14948  510 LESQSGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPT 589


                  ....*
gi 1767294009 317 SEAPP 321
Cdd:PRK14948  590 KDSSP 594
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 268-352 1.35e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 42.57  E-value: 1.35e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009  268 PSEVPPT----------PKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAP-PTPRSAAPSDVPPTPK 336
Cdd:PRK12270    22 PNSVDPSwreffadygpGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPkPAAAAAAAAAPAAPPA 101

                           90
                   ....*....|....*.
gi 1767294009  337 SNGHIANGSIPGTPSV 352
Cdd:PRK12270   102 AAAAAAPAAAAVEDEV 117
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 211-341 1.37e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.67  E-value: 1.37e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 211 APPEGKRPRTPNDLDNPTADEEPAAELEADAGS----------EVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAP 280
Cdd:PRK07764  599 GPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGaaaapaeasaAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAP 678

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767294009 281 SEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHI 341
Cdd:PRK07764  679 AAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPV 739
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 262-357 1.58e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.10  E-value: 1.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 262 TPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAaQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPksnghi 341
Cdd:PRK14950  344 TSYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPA-PSTRPKAAAAANIPPKEPVRETATPPPVPPRP------ 416

                          90
                  ....*....|....*.
gi 1767294009 342 ANGSIPGTPSVAQESA 357
Cdd:PRK14950  417 VAPPVPHTPESAPKLT 432
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 210-328 1.66e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 42.16  E-value: 1.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 210 QAPPEGKRPRTPndlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTP--------KSAAPS 281
Cdd:PRK07994  391 VAPPQAPAVPPP---PASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARPVNsalerlasVRPAPS 467

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1767294009 282 EVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPS-EAPPTPRSAAP 328
Cdd:PRK07994  468 ALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKAlEHEKTPELAAK 515
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 233-335 1.67e-03

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 41.86  E-value: 1.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 233 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAApseVPPTPKSAAPSEVPLTPksaAQSSVPPTPK 312
Cdd:PTZ00436  222 PAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAA---APPAKAAAPPAKAAAPP---AKAAAPPAKA 295

                          90       100
                  ....*....|....*....|....*
gi 1767294009 313 SAVPSE--APPTPRSAAPSDVPPTP 335
Cdd:PTZ00436  296 AAAPAKaaAAPAKAAAAPAKAAAPP 320
PRK14954 PRK14954
DNA polymerase III subunits gamma and tau; Provisional
 243-317 1.98e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184918 [Multi-domain]  Cd Length: 620  Bit Score: 41.85  E-value: 1.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 243 SEVPPTPKTAASEKQSVPPTPKSAAPSEVPPT--------PKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA 314
Cdd:PRK14954  378 GGVAPSPAGSPDVKKKAPEPDLPQPDRHPGPAkpeapgarPAELPSPASAPTPEQQPPVARSAPLPPSPQASAPRNVASG 457


                  ...
gi 1767294009 315 VPS 317
Cdd:PRK14954  458 KPG 460
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 257-364 2.00e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 2.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 257 QSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDvPPTPK 336
Cdd:PRK07764  383 RRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSP-PPAAA 461

                          90       100
                  ....*....|....*....|....*...
gi 1767294009 337 SNGHIANGSIPGTPSVAQESAKATPAAT 364
Cdd:PRK07764  462 PSAQPAPAPAAAPEPTAAPAPAPPAAPA 489
PHA02030 PHA02030
hypothetical protein
 237-336 2.19e-03

hypothetical protein


Pssm-ID: 222843 [Multi-domain]  Cd Length: 336  Bit Score: 41.12  E-value: 2.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 237 LEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPtpksAAPSeVPLTPKSAAQSSVPPTPKSAVP 316
Cdd:PHA02030  247 LGGGEDLIIKPKSKAAGSNLPAVPNVAADAGSAAAPAVP--AAAAAVAQ----AAPS-VPQVPNVAVLPDVPQVAPVAAP 319

                          90       100
                  ....*....|....*....|
gi 1767294009 317 SeAPPTPrsAAPSdVPPTPK 336
Cdd:PHA02030  320 A-APEVP--AVPV-VPAAPQ 335
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 210-357 2.20e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 2.20e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 210 QAPPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPTPKS 289
Cdd:PRK07764  625 AAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAP--AAPAGAAPAQPA 702

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 290 AAPSEVPLTPKSAAQSSVPPTPKSAvpsEAPPTPRSAAPSDVPPTPKSN--GHIANGSIPGTPSVAQESA 357
Cdd:PRK07764  703 PAPAATPPAGQADDPAAQPPQAAQG---ASAPSPAADDPVPLPPEPDDPpdPAGAPAQPPPPPAPAPAAA 769
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 229-335 2.21e-03

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 41.47  E-value: 2.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 229 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAApseVPPTPKSAAPSEVPLTPKSA----AQ 304
Cdd:PTZ00436  239 AAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAA---APPAKAAAAPAKAAAAPAKAaaapAK 315

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1767294009 305 SSVPPTPKSAVPSEA--PPTPRSAAPSDVPPTP 335
Cdd:PTZ00436  316 AAAPPAKAAAPPAKAatPPAKAAAPPAKAAAAP 348
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 239-357 2.24e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 2.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 239 ADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEvPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPK-SAVPS 317
Cdd:PRK07764  589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPAA-PAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDaSDGGD 667

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1767294009 318 EAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTPSVAQESA 357
Cdd:PRK07764  668 GWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAA 707
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 212-338 2.42e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 41.29  E-value: 2.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 212 PPEGKRPRTPNDLDnPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPTPKSAA 291
Cdd:NF040712  200 ATVPRLAREPADAR-PEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGP--GAAPAAEPDEATRD 276

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1767294009 292 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSN 338
Cdd:NF040712  277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 207-321 2.67e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 41.14  E-value: 2.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 207 FELQAPPEGKRPRTPNDlDNPTADEEPAAELEADAGSEVPPTPKTAAsekqsvPPTPKSAAPSEVPPTPKSAAPSEVPPT 286
Cdd:PHA03264  264 YEPPPAPSGGSPAPPGD-DRPEAKPEPGPVEDGAPGRETGGEGEGPE------PAGRDGAAGGEPKPGPPRPAPDADRPE 336

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294009 287 PksaapsevplTPKSAAQSSVPPTPKSAVPSEAPP 321
Cdd:PHA03264  337 G----------WPSLEAITFPPPTPATPAVPRARP 361
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
 233-351 2.73e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.59  E-value: 2.73e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 233 PAAELEADAGSEVPPT----PKTAASEKQSVPPT----PKSAAPSEvPPTPKSAAPSEVPPtpkSAAPS------EVPLT 298
Cdd:PRK14959  367 PVESLRPSGGGASAPSgsaaEGPASGGAATIPTPgtqgPQGTAPAA-GMTPSSAAPATPAP---SAAPSprvpwdDAPPA 442

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1767294009 299 PksaAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHiANGSIPGTPS 351
Cdd:PRK14959  443 P---PRSGIPPRPAPRMPEASPVPGAPDSVASASDAPPTLGD-PSDTAEHTPS 491
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
241-321 2.74e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 40.77  E-value: 2.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 241 AGSEVPPTPKTAAseKQSVPPT-----PKSAAPSEVPPTPKSAAPSevpPTPKSAAPSEVPL-TPKSaaqssvpPTPKSa 314
Cdd:PRK13042   28 ANATTPSSTKVEA--PQSTPPStkveaPQSKPNATTPPSTKVEAPQ---QTPNATTPSSTKVeTPQS-------PTTKQ- 94


                  ....*..
gi 1767294009 315 VPSEAPP 321
Cdd:PRK13042   95 VPTEINP 101
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 228-299 3.02e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.21  E-value: 3.02e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294009 228 TADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPK--SAAPSEVPPTPKSAAPSEVPPTPKSAA-PSE--VPLTP 299
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAasKPTPPAAAKPPEPAPAAKPPPTPVARAdPREtrVPMSR 196
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
254-338 3.42e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 41.10  E-value: 3.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 254 SEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSsvPPTPKSAVPSEAPPTPRSAAPsdvPP 333
Cdd:PRK14948  361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKAS--PPIPVPAEPTEPSPTPPANAA---NA 435


                  ....*
gi 1767294009 334 TPKSN 338
Cdd:PRK14948  436 PPSLN 440
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 233-336 3.44e-03

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 40.87  E-value: 3.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 233 PAAELEADAGSEVPpTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAapseVPPTPksAAPSEVPLTPKSAAQSSVPPTPK 312
Cdd:PHA03269   27 PIPELHTSAATQKP-DPAPAPHQAASRAPDPAVAPTSAASRKPDLA----QAPTP--AASEKFDPAPAPHQAASRAPDPA 99

                          90       100
                  ....*....|....*....|....
gi 1767294009 313 SAVPSEAPPTPRSAAPSDVPPTPK 336
Cdd:PHA03269  100 VAPQLAAAPKPDAAEAFTSAAQAH 123
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 259-332 3.46e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 40.76  E-value: 3.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 259 VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQ--SSVPPTPKSAVPSEAPP------TPRSAAPSD 330
Cdd:PHA03264  254 VPPYFEESKGYEPPPAPSGGSPAPPGDDRPEAKPEPGPVEDGAPGRetGGEGEGPEPAGRDGAAGgepkpgPPRPAPDAD 333


                  ..
gi 1767294009 331 VP 332
Cdd:PHA03264  334 RP 335
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
258-346 3.56e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 41.10  E-value: 3.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 258 SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 337
Cdd:PRK14948  516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPE 595

                          90
                  ....*....|....*..
gi 1767294009 338 NGHIA--------NGSI 346
Cdd:PRK14948  596 EIDKAaknladffNGEI 612
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 204-344 3.92e-03

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 40.77  E-value: 3.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 204 KQEFELqAPPEGKRPRTPNDLDNPTADEEpAAELEADAGSEVPPTPKTAASE-KQSVPPTPKSAAPSEVPPTPkSAAPSE 282
Cdd:NF033838  352 EAELEL-VKEEAKEPRNEEKIKQAKAKVE-SKKAEATRLEKIKTDRKKAEEEaKRKAAEEDKVKEKPAEQPQP-APAPQP 428

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767294009 283 VPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA------VPSEAPPTPRSAAPsdvPPTPKSNGHIANG 344
Cdd:NF033838  429 EKPAPKPEKPAEQPKAEKPADQQAEEDYARRSeeeynrLTQQQPPKTEKPAQ---PSTPKTGWKQENG 493
PHA02682 PHA02682
ORF080 virion core protein; Provisional
 227-336 3.99e-03

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 40.23  E-value: 3.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 227 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAA--PSEVPLTPKSAAQ 304
Cdd:PHA02682   43 PDADVDPLDKYSVKEAGRYYQSRLKANSACMQRPSGQSPLAPSPACAAPAPACPACAPAAPAPAVtcPAPAPACPPATAP 122

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294009 305 SSVPPT--PKSAVPSEA-PPTPRSAAPSDVPPTPK 336
Cdd:PHA02682  123 TCPPPAvcPAPARPAPAcPPSTRQCPPAPPLPTPK 157
PRK10856 PRK10856
cytoskeleton protein RodZ;
220-315 4.53e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 40.39  E-value: 4.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 220 TPNDLDNPTADEEPAAELEADAgseVPPTPKTAASEKQSVPPTPKSAA--PSEVPPTPKSAAPSEVPPTPKSAAPSEVPL 297
Cdd:PRK10856  160 QSVPLDTSTTTDPATTPAPAAP---VDTTPTNSQTPAVATAPAPAVDPqqNAVVAPSQANVDTAATPAPAAPATPDGAAP 236

                          90
                  ....*....|....*...
gi 1767294009 298 TPKSAAQSSVPPTPKSAV 315
Cdd:PRK10856  237 LPTDQAGVSTPAADPNAL 254
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
251-336 5.12e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 40.00  E-value: 5.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 251 TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSevpPTPKSAAPSEVPL-TPKSAAQSSVPPTPKSAVPsEAPPTPRsaAPS 329
Cdd:PRK13042   24 TTQAANATTPSSTKVEAPQSTPPSTKVEAPQ---SKPNATTPPSTKVeAPQQTPNATTPSSTKVETP-QSPTTKQ--VPT 97


                  ....*..
gi 1767294009 330 DVPPTPK 336
Cdd:PRK13042   98 EINPKFK 104
Rib_recp_KP_reg pfam05104
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ...
 233-322 5.14e-03

Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.


Pssm-ID: 461548 [Multi-domain]  Cd Length: 140  Bit Score: 38.18  E-value: 5.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 233 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAaPSEVPPTPKSAAPSEVP-PTPKSAAPSEVPLTPKSAAQSSVPPTP 311
Cdd:pfam05104  51 PESEQADESEEEPREFKTPDEAPSAALEPEPVPT-PVPAPVEPEPAPPSESPaPSPKEKKKKEKKSAKVEPAETPEAVQP 129

                          90
                  ....*....|.
gi 1767294009 312 KSAVPSEAPPT 322
Cdd:pfam05104 130 KPALEKEEPPA 140
PRK12373 PRK12373
NADH-quinone oxidoreductase subunit E;
218-330 5.45e-03

NADH-quinone oxidoreductase subunit E;


Pssm-ID: 237082 [Multi-domain]  Cd Length: 400  Bit Score: 40.17  E-value: 5.45e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 218 PRTPNDLDNPTADEEPAAELEADaGSEVPPTP---KTAASEKQSVPPTPKSAAPsEVPPTPKSAAPSEVPPTPKSAAPSE 294
Cdd:PRK12373  202 GKARYNASKALAEDIGDTVKRID-GTEVPLLApwqGDAAPVPPSEAARPKSADA-ETNAALKTPATAPKAAAKNAKAPEA 279

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1767294009 295 VPLTPKSAAQSSVPPTPKSAVPSEAPP---------TPRSAAPSD 330
Cdd:PRK12373  280 QPVSGTAAAEPAPKEAAKAAAAAAKPAledkprplgIARPGGADD 324
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
 249-330 6.80e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 39.88  E-value: 6.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 249 PKTAASEKQSVPPTPKSAapsevpPTPKSAAPseVPPTPKSAAPsevpltPKSAAQSSVPPTPKSAVPSEAPPTPRSAAP 328
Cdd:TIGR00601  77 PKTGTGKVAPPAATPTSA------PTPTPSPP--ASPASGMSAA------PASAVEEKSPSEESATATAPESPSTSVPSS 142


                  ..
gi 1767294009 329 SD 330
Cdd:TIGR00601 143 GS 144
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
266-337 6.81e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.37  E-value: 6.81e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294009 266 AAPSEVPPTPKSAAPsEVPPTPKSAAPSEVPlTPKSAAQSSVPPTPKSAVPsEAPPTPRSAAPSDVPPTPKS 337
Cdd:COG5373    38 AEAAEAASAPAEPEP-EAAAAATAAAPEAAP-APVPEAPAAPPAAAEAPAP-AAAAPPAEAEPAAAPAAASS 106
FAP pfam07174
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment ...
 237-332 8.53e-03

Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment proteins (FAP). Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix.


Pssm-ID: 429334  Cd Length: 301  Bit Score: 39.14  E-value: 8.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 237 LEADAGSEVPPTPktaasekqsVPPTPKSAAPSEVPPTPKSAAPseVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVP 316
Cdd:pfam07174  33 LPAVAHADPEPAP---------PPPSTATAPPAPPPPPPAPAAP--APPPPPAAPNAPNAPPPPADPNAPPPPPADPNAP 101

                          90
                  ....*....|....*.
gi 1767294009 317 SEAPPTPRSAAPSDVP 332
Cdd:pfam07174 102 PPPAVDPNAPEPGRID 117
PRK12373 PRK12373
NADH-quinone oxidoreductase subunit E;
231-350 9.98e-03

NADH-quinone oxidoreductase subunit E;


Pssm-ID: 237082 [Multi-domain]  Cd Length: 400  Bit Score: 39.40  E-value: 9.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294009 231 EEPAAELEADAGSEVP---PTPKTAASEKQSVPPTPKSAAPseVPPTPKSAAPSEVPPT-PKSAAPSEVPLTP-KSAAQS 305
Cdd:PRK12373  200 EAGKARYNASKALAEDigdTVKRIDGTEVPLLAPWQGDAAP--VPPSEAARPKSADAETnAALKTPATAPKAAaKNAKAP 277

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1767294009 306 SVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTP 350
Cdd:PRK12373  278 EAQPVSGTAAAEPAPKEAAKAAAAAAKPALEDKPRPLGIARPGGA 322
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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