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Conserved domains on  [gi|1767294007|ref|NP_001362140|]
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Aggrecan core protein [Caenorhabditis elegans]

Protein Classification

protein kinase family protein( domain architecture ID 1023597)

protein kinase family protein, may catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine and/or tyrosine residues on protein substrates

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK07003 super family cl35530
DNA polymerase III subunit gamma/tau;
261-379 1.89e-10

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK07003:

Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 64.87  E-value: 1.89e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PRK07003  425 APPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATP 504
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1767294007 341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK07003  505 AAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPA 543
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
261-557 9.80e-03

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.77  E-value: 9.80e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  261 APPEGKRPRTPNDlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PHA03307   111 PSSPDPPPPTPPP-ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSP 189
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSiPGTPSVAQERVEPEPEPVAEEPEP 420
Cdd:PHA03307   190 PAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSES-SGCGWGPENECPLPRPAPITLPTR 268
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  421 VAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPA 500
Cdd:PHA03307   269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS 348
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007  501 RRRPQSPSPERQRTSRHADRdITSYDEDSYRAVPPPRMPTATSFSSWSPPDKQSYTP 557
Cdd:PHA03307   349 RSPSPSRPPPPADPSSPRKR-PRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDAT 404
 
Name Accession Description Interval E-value
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
261-379 1.89e-10

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 64.87  E-value: 1.89e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PRK07003  425 APPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATP 504
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1767294007 341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK07003  505 AAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPA 543
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
259-401 2.24e-05

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 48.37  E-value: 2.24e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 259 LQAPPEGKRPRTPNDLDNPTadeePAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPK 338
Cdd:pfam05109 458 LTAPASTGPTVSTADVTSPT----PAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPN 533
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 339 SAAPSEVPLTPKSAAQSSVP-----------PTPKSAVPS---EAP------PTPRSAAPSDVPPTPKSNghIANGSIPG 398
Cdd:pfam05109 534 ATSPTLGKTSPTSAVTTPTPnatsptpavttPTPNATIPTlgkTSPtsavttPTPNATSPTVGETSPQAN--TTNHTLGG 611

                  ...
gi 1767294007 399 TPS 401
Cdd:pfam05109 612 TSS 614
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
262-388 1.89e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 41.29  E-value: 1.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 262 PPEGKRPRTPNDLDnPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPTPKSAA 341
Cdd:NF040712  200 ATVPRLAREPADAR-PEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGP--GAAPAAEPDEATRD 276
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1767294007 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSN 388
Cdd:NF040712  277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
254-394 3.43e-03

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 41.15  E-value: 3.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 254 KQEFELqAPPEGKRPRTPNDLDNPTADEEpAAELEADAGSEVPPTPKTAASE-KQSVPPTPKSAAPSEVPPTPkSAAPSE 332
Cdd:NF033838  352 EAELEL-VKEEAKEPRNEEKIKQAKAKVE-SKKAEATRLEKIKTDRKKAEEEaKRKAAEEDKVKEKPAEQPQP-APAPQP 428
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767294007 333 VPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA------VPSEAPPTPRSAAPsdvPPTPKSNGHIANG 394
Cdd:NF033838  429 EKPAPKPEKPAEQPKAEKPADQQAEEDYARRSeeeynrLTQQQPPKTEKPAQ---PSTPKTGWKQENG 493
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
299-380 5.79e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 39.88  E-value: 5.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 299 PKTAASEKQSVPPTPKSAapsevpPTPKSAAPseVPPTPKSAAPsevpltPKSAAQSSVPPTPKSAVPSEAPPTPRSAAP 378
Cdd:TIGR00601  77 PKTGTGKVAPPAATPTSA------PTPTPSPP--ASPASGMSAA------PASAVEEKSPSEESATATAPESPSTSVPSS 142

                  ..
gi 1767294007 379 SD 380
Cdd:TIGR00601 143 GS 144
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
316-387 6.48e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.37  E-value: 6.48e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294007 316 AAPSEVPPTPKSAAPsEVPPTPKSAAPSEVPlTPKSAAQSSVPPTPKSAVPsEAPPTPRSAAPSDVPPTPKS 387
Cdd:COG5373    38 AEAAEAASAPAEPEP-EAAAAATAAAPEAAP-APVPEAPAAPPAAAEAPAP-AAAAPPAEAEPAAAPAAASS 106
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
261-557 9.80e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.77  E-value: 9.80e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  261 APPEGKRPRTPNDlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PHA03307   111 PSSPDPPPPTPPP-ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSP 189
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSiPGTPSVAQERVEPEPEPVAEEPEP 420
Cdd:PHA03307   190 PAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSES-SGCGWGPENECPLPRPAPITLPTR 268
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  421 VAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPA 500
Cdd:PHA03307   269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS 348
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007  501 RRRPQSPSPERQRTSRHADRdITSYDEDSYRAVPPPRMPTATSFSSWSPPDKQSYTP 557
Cdd:PHA03307   349 RSPSPSRPPPPADPSSPRKR-PRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDAT 404
 
Name Accession Description Interval E-value
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
261-379 1.89e-10

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 64.87  E-value: 1.89e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PRK07003  425 APPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATP 504
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1767294007 341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK07003  505 AAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPA 543
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
298-395 5.75e-08

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 56.36  E-value: 5.75e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 298 TPKTAAsekqsVPPTPKSAAPSEVPPTPksaAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPP----TPKSAVPSEAPPTP 373
Cdd:PRK14950  361 VPVPAP-----QPAKPTAAAPSPVRPTP---APSTRPKAAAAANIPPKEPVRETATPPPVPPrpvaPPVPHTPESAPKLT 432
                          90       100
                  ....*....|....*....|....*...
gi 1767294007 374 RSAAPSDV------PPTPKSNGHIANGS 395
Cdd:PRK14950  433 RAAIPVDEkpkytpPAPPKEEEKALIAD 460
PHA03247 PHA03247
large tegument protein UL36; Provisional
261-400 6.98e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.87  E-value: 6.98e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  261 APPEGKRPRTPNDLDNPTADEEPAAeleaDAGSEVPPTPKTAASEKQSVPPT-PKSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PHA03247  2726 AAARQASPALPAAPAPPAVPAGPAT----PGGPARPARPPTTAGPPAPAPPAaPAAGPPRRLTRPAVASLSESRESLPSP 2801
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767294007  340 AAPSEVPlTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTP 400
Cdd:PHA03247  2802 WDPADPP-AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGD 2861
PHA03247 PHA03247
large tegument protein UL36; Provisional
261-400 9.46e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.49  E-value: 9.46e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPktAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPP----- 335
Cdd:PHA03247  2591 APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPP--SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRprrar 2668
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  336 ----TPKSAAPSEVPLTPksAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNG-HIANGSIPGTP 400
Cdd:PHA03247  2669 rlgrAAQASSPPQRPRRR--AARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGpAAARQASPALP 2736
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
258-387 1.14e-07

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 55.85  E-value: 1.14e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 258 ELQAPPEGKRPRTPNDLDnPTADEEPAAELEadagsevpPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTP 337
Cdd:PTZ00449  539 ESDEPKEGGKPGETKEGE-VGKKPGPAKEHK--------PSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRP 609
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1767294007 338 KSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PTZ00449  610 KSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKP 659
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
296-392 4.68e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 53.66  E-value: 4.68e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 296 PPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSaaqssvppTPKSAVPSEAPPTPRS 375
Cdd:PRK14950  363 VPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVA--------PPVPHTPESAPKLTRA 434
                          90       100
                  ....*....|....*....|..
gi 1767294007 376 AAPSDV-----PPTPKSNGHIA 392
Cdd:PRK14950  435 AIPVDEkpkytPPAPPKEEEKA 456
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
257-353 6.75e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 53.36  E-value: 6.75e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  257 FELQAPPEGKRPRTPndlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPT 336
Cdd:PRK12270    33 FADYGPGSTAAPTAA---AAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109
                           90
                   ....*....|....*..
gi 1767294007  337 PKSAAPSEVPLTPKSAA 353
Cdd:PRK12270   110 AAAVEDEVTPLRGAAAA 126
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
302-387 1.15e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 52.41  E-value: 1.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 302 AASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPsevpltpksAAQSSVPPTPKSAVPSEAPPTPRSAAPSDV 381
Cdd:PRK14951  375 PAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPA---------APPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445

                  ....*.
gi 1767294007 382 PPTPKS 387
Cdd:PRK14951  446 ALAPAP 451
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
305-386 2.14e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 51.81  E-value: 2.14e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  305 EKQSVPPT---------PKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRS 375
Cdd:PRK12270    21 DPNSVDPSwreffadygPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP 100
                           90
                   ....*....|.
gi 1767294007  376 AAPSDVPPTPK 386
Cdd:PRK12270   101 AAAAAAAPAAA 111
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
274-375 2.39e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 51.43  E-value: 2.39e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  274 LDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPsevPPTPKSAAPSEVPLTPKSAA 353
Cdd:PRK12270    19 LADPNSVDPSWREFFADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP---AAAAPAAPPKPAAAAAAAAA 95
                           90       100
                   ....*....|....*....|..
gi 1767294007  354 QSSVPPTPKSAVPSEAPPTPRS 375
Cdd:PRK12270    96 PAAPPAAAAAAAPAAAAVEDEV 117
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
313-384 1.57e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 48.56  E-value: 1.57e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294007 313 PKSAAPSEVPPTPKSAAPsevpptPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPT 384
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPAR------PEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAA 431
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
260-374 1.66e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 48.62  E-value: 1.66e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 260 QAPPEGKRPRTPNDLDNPtADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPkSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PRK14971  364 QKGDDASGGRGPKQHIKP-VFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQS-ATQPAGTPPTVSVDPPAAVPVNPPS 441
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294007 340 AAPSEVPLTPKSAAQssvpPTPKSAVPSEAPPTPR 374
Cdd:PRK14971  442 TAPQAVRPAQFKEEK----KIPVSKVSSLGPSTLR 472
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
259-401 2.24e-05

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 48.37  E-value: 2.24e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 259 LQAPPEGKRPRTPNDLDNPTadeePAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPK 338
Cdd:pfam05109 458 LTAPASTGPTVSTADVTSPT----PAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPN 533
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 339 SAAPSEVPLTPKSAAQSSVP-----------PTPKSAVPS---EAP------PTPRSAAPSDVPPTPKSNghIANGSIPG 398
Cdd:pfam05109 534 ATSPTLGKTSPTSAVTTPTPnatsptpavttPTPNATIPTlgkTSPtsavttPTPNATSPTVGETSPQAN--TTNHTLGG 611

                  ...
gi 1767294007 399 TPS 401
Cdd:pfam05109 612 TSS 614
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
277-379 2.27e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 48.06  E-value: 2.27e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS 356
Cdd:PRK07764  401 AAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAP 480
                          90       100
                  ....*....|....*....|...
gi 1767294007 357 VPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK07764  481 APAPPAAPAPAAAPAAPAAPAAP 503
flhF PRK06995
flagellar biosynthesis protein FlhF;
279-385 2.43e-05

flagellar biosynthesis protein FlhF;


Pssm-ID: 235904 [Multi-domain]  Cd Length: 484  Bit Score: 47.65  E-value: 2.43e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPP--TPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS 356
Cdd:PRK06995   44 ADSDLAALAPPAAAAPAAAQPPPAAAPAAVSRPaaPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERA 123
                          90       100
                  ....*....|....*....|....*....
gi 1767294007 357 VPPTPKSAVPSEAPPTPRSAAPSDVPPTP 385
Cdd:PRK06995  124 AAENAARRLARAAAAAPRPRVPADAAAAV 152
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
277-383 2.66e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 47.95  E-value: 2.66e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAA-SEKQSVPPTPKSAAPSEVP---------PTPKSAAPSEVPPTPKSAAPsevp 346
Cdd:PRK12323  388 AAAAPAAAAPAPAAPPAAPAAAPAAAAaARAVAAAPARRSPAPEALAaarqasargPGGAPAPAPAPAAAPAAAAR---- 463
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1767294007 347 ltPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPP 383
Cdd:PRK12323  464 --PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPP 498
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
277-390 4.20e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 47.29  E-value: 4.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEvPPTPKTAASEKQSVPPTPKSA-APSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQS 355
Cdd:PRK07764  394 PAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPApAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAA 472
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294007 356 SVPPTPKSAvpSEAPPTPRSAAPSDVPPTPKSNGH 390
Cdd:PRK07764  473 APEPTAAPA--PAPPAAPAPAAAPAAPAAPAAPAG 505
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
278-404 4.25e-05

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 47.23  E-value: 4.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 278 TADEEPAAELEADAGSEVPPTPKTAASEKqsvpptPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSevPLTPKSAAQSSV 357
Cdd:PLN03209  310 TAPLTPMEELLAKIPSQRVPPKESDAADG------PKPVPTKPVTPEAPSPPIEEEPPQPKAVVPR--PLSPYTAYEDLK 381
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1767294007 358 PPTPksavPSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTPSVAQ 404
Cdd:PLN03209  382 PPTS----PIPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSASNVPE 424
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
279-385 4.42e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 47.29  E-value: 4.42e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPtpksAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVP 358
Cdd:PRK07764  390 GAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPA----PAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465
                          90       100
                  ....*....|....*....|....*..
gi 1767294007 359 PTPKSAVPSEAPPTPRSAAPSDVPPTP 385
Cdd:PRK07764  466 PAPAPAAAPEPTAAPAPAPPAAPAPAA 492
PRK10856 PRK10856
cytoskeleton protein RodZ;
302-385 4.52e-05

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 46.56  E-value: 4.52e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 302 AASEKQSVPPTPKSAAPSevPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS--VPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK10856  155 SQNSGQSVPLDTSTTTDP--ATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNavVAPSQANVDTAATPAPAAPATPD 232

                  ....*.
gi 1767294007 380 DVPPTP 385
Cdd:PRK10856  233 GAAPLP 238
PRK10856 PRK10856
cytoskeleton protein RodZ;
284-380 4.68e-05

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 46.56  E-value: 4.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 284 AAELEADAGSEVPPTPKTAASEKQ---SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPT 360
Cdd:PRK10856  151 SAELSQNSGQSVPLDTSTTTDPATtpaPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPAT 230
                          90       100
                  ....*....|....*....|
gi 1767294007 361 PKSAVPSEAPPTPRSAAPSD 380
Cdd:PRK10856  231 PDGAAPLPTDQAGVSTPAAD 250
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
277-381 5.02e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 46.90  E-value: 5.02e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS 356
Cdd:PRK07764  406 PAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPP 485
                          90       100
                  ....*....|....*....|....*
gi 1767294007 357 VPPTPKSAVPSEAPPTPrSAAPSDV 381
Cdd:PRK07764  486 AAPAPAAAPAAPAAPAA-PAGADDA 509
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
260-373 6.97e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 46.63  E-value: 6.97e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 260 QAPPEGKRPRTPndldnPTADEEPAAeleADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PRK14951  385 EAAAPAAAPVAQ-----AAAAPAPAA---APAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAA 456
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1767294007 340 AAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTP 373
Cdd:PRK14951  457 PETVAIPVRVAPEPAVASAAPAPAAAPAAARLTP 490
PRK11633 PRK11633
cell division protein DedD; Provisional
277-378 1.02e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.61  E-value: 1.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTP-KTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPlTPKSAAQS 355
Cdd:PRK11633   45 PKPGDRDEPDMMPAATQALPTQPpEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKP-KPKPKPQQ 123
                          90       100
                  ....*....|....*....|...
gi 1767294007 356 SVPPTPKSAvPSEAPPTPRSAAP 378
Cdd:PRK11633  124 KVEAPPAPK-PEPKPVVEEKAAP 145
PHA03269 PHA03269
envelope glycoprotein C; Provisional
283-388 1.22e-04

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 45.49  E-value: 1.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 283 PAAELEADAGSEVP---PTPKTAASEKQSVPPTPKSAAPSEVPP--TPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSV 357
Cdd:PHA03269   27 PIPELHTSAATQKPdpaPAPHQAASRAPDPAVAPTSAASRKPDLaqAPTPAASEKFDPAPAPHQAASRAPDPAVAPQLAA 106
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1767294007 358 PPTPKSAVPSEAPPTpRSAAPSDVP-------PTPKSN 388
Cdd:PHA03269  107 APKPDAAEAFTSAAQ-AHEAPADAGtsaaskkPDPAAH 143
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
262-387 1.62e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 45.30  E-value: 1.62e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 262 PPEGKRPRtPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPsEVPPTPKSAA 341
Cdd:PLN03209  390 PPSSSPAS-SKSVDAVAKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTA-PTGVSPSVSS 467
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1767294007 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PLN03209  468 TSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPS 513
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
277-441 2.29e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.87  E-value: 2.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSA-APSEVPPTP---------KSAAPSEVPPTPKSAAPSEVP 346
Cdd:PRK12323  381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAaAPARRSPAPealaaarqaSARGPGGAPAPAPAPAAAPAA 460
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 347 LTPKSAAQSSVPPTPKSAVPS-EAPPTPRSAAPSDVPPTPKSNGHIAngSIPGTPSVAQERVEPEPEPVAEEPEPVAEPE 425
Cdd:PRK12323  461 AARPAAAGPRPVAAAAAAAPArAAPAAAPAPADDDPPPWEELPPEFA--SPAPAQPDAAPAGWVAESIPDPATADPDDAF 538
                         170
                  ....*....|....*.
gi 1767294007 426 PEPEPVAEAEPEAEPA 441
Cdd:PRK12323  539 ETLAPAPAAAPAPRAA 554
PLN02217 PLN02217
probable pectinesterase/pectinesterase inhibitor
279-393 2.60e-04

probable pectinesterase/pectinesterase inhibitor


Pssm-ID: 215130 [Multi-domain]  Cd Length: 670  Bit Score: 44.69  E-value: 2.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 279 ADEE-----PAAELEADA---GSEVPPTPKTAASEKQSVPPTPK-SAAPSEVPPTPKSAAPSEVPPT-PKSAAPSEVPLT 348
Cdd:PLN02217  531 SDEEilkftPAQYIQGDAwipGKGVPYIPGLFAGNPGSTNSTPTgSAASSNTTFSSDSPSTVVAPSTsPPAGHLGSPPAT 610
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1767294007 349 P-KSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPT--PKSNGHIAN 393
Cdd:PLN02217  611 PsKIVSPSTSPPASHLGSPSTTPSSPESSIKVASTETasPESSIKVAS 658
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
312-387 2.76e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 43.85  E-value: 2.76e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007 312 TPKSAAPSEVPPTPKSAAPSEVPPTPKsaapsevPLTPKSAAQSSVPPTPKSAVPSEAP-PTPRSAAPSDVPPTPKS 387
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPSTK-------VEAPQSKPNATTPPSTKVEAPQQTPnATTPSSTKVETPQSPTT 92
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
260-412 3.36e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.59  E-value: 3.36e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 260 QAPPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PRK07764  631 GAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPP 710
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767294007 340 AAPSEVPLT-PKSAAQSSVPPTPKSAVPSEAPPTPRSA-APSDVPPTPKSNGHIANgsiPGTPSVAQERVEPEPE 412
Cdd:PRK07764  711 AGQADDPAAqPPQAAQGASAPSPAADDPVPLPPEPDDPpDPAGAPAQPPPPPAPAP---AAAPAAAPPPSPPSEE 782
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
316-397 3.36e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 44.42  E-value: 3.36e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 316 AAPSEVPPTPKSAAPSEVPPTPksaAPSEvplTPKSAAQSSVPPT-PKSAVPSEAPPTPRSAAPSdVPPTPKSNGHIANG 394
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPTP---APST---RPKAAAAANIPPKePVRETATPPPVPPRPVAPP-VPHTPESAPKLTRA 434

                  ...
gi 1767294007 395 SIP 397
Cdd:PRK14950  435 AIP 437
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
283-385 4.46e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 44.00  E-value: 4.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 283 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTpk 362
Cdd:PRK14971  363 TQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPP-- 440
                          90       100
                  ....*....|....*....|...
gi 1767294007 363 SAVPSEAPPTPrsaAPSDVPPTP 385
Cdd:PRK14971  441 STAPQAVRPAQ---FKEEKKIPV 460
PRK10856 PRK10856
cytoskeleton protein RodZ;
270-357 4.84e-04

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 43.09  E-value: 4.84e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 270 TPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPsevPLTP 349
Cdd:PRK10856  171 DPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAG---VSTP 247

                  ....*...
gi 1767294007 350 KSAAQSSV 357
Cdd:PRK10856  248 AADPNALV 255
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
276-385 5.06e-04

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 43.19  E-value: 5.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 276 NPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPltpksaaQS 355
Cdd:PRK13335   53 NITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTT-------ES 125
                          90       100       110
                  ....*....|....*....|....*....|
gi 1767294007 356 SVPPTPKSAVPSEAPPTPRSAAPSDVPPTP 385
Cdd:PRK13335  126 TTPKTKVTTPPSTNTPQPMQSTKSDTPQSP 155
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
289-404 5.45e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.82  E-value: 5.45e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 289 ADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVP---PTPKSAV 365
Cdd:PRK07764  389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPaaaPSAQPAP 468
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1767294007 366 PSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTPSVAQ 404
Cdd:PRK07764  469 APAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGAD 507
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
279-370 5.65e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 43.73  E-value: 5.65e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  279 ADEEPAAeleADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPP--TPKSAAPSEVPPTPKSAAPSevpltPKSAAQSS 356
Cdd:PRK12270    34 ADYGPGS---TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPaaAAPAAPPKPAAAAAAAAAPA-----APPAAAAA 105
                           90
                   ....*....|....
gi 1767294007  357 VPPTPKSAVPSEAP 370
Cdd:PRK12270   106 AAPAAAAVEDEVTP 119
PRK11633 PRK11633
cell division protein DedD; Provisional
277-372 5.88e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 42.30  E-value: 5.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAElEADAGSEVPPT--PKTAASEKQSVPPTPKSAAPSEVPPTPKsaapseVPPTPKSAAPSEVPLTPKsaaq 354
Cdd:PRK11633   64 PTQPPEGAAE-AVRAGDAAAPSldPATVAPPNTPVEPEPAPVEPPKPKPVEK------PKPKPKPQQKVEAPPAPK---- 132
                          90
                  ....*....|....*...
gi 1767294007 355 ssvpPTPKSAVPSEAPPT 372
Cdd:PRK11633  133 ----PEPKPVVEEKAAPT 146
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
263-385 6.01e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 43.71  E-value: 6.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 263 PEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPksaAP 342
Cdd:PRK12323  444 PGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAP---AG 520
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1767294007 343 SEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSD--VPPTP 385
Cdd:PRK12323  521 WVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEpvVAPRP 565
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
263-384 6.48e-04

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 43.41  E-value: 6.48e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 263 PEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPK------SAAPSEVPPTPKS--------- 327
Cdd:pfam17823 301 AQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKaqakepSASPVPVLHTSMIpeveatspt 380
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007 328 AAPSEVPPTPKSAAPSeVPLTPKSAAQSSVPPTpksavpSEAPPTPRSAAPSDVPPT 384
Cdd:pfam17823 381 TQPSPLLPTQGAAGPG-ILLAPEQVATEATAGT------ASAGPTPRSSGDPKTLAM 430
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
279-385 7.53e-04

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 42.63  E-value: 7.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAApseVPPTPKSAAPSEVPLTPKSA----AQ 354
Cdd:PTZ00436  239 AAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAA---APPAKAAAAPAKAAAAPAKAaaapAK 315
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1767294007 355 SSVPPTPKSAVPSEA--PPTPRSAAPSDVPPTP 385
Cdd:PTZ00436  316 AAAPPAKAAAPPAKAatPPAKAAAPPAKAAAAP 348
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
276-358 8.14e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 43.34  E-value: 8.14e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  276 NPTADEEPAAELEADAGSEVPPTPKTAASEKQ-SVPPTPKSAAPSeVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQ 354
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAaPAPAPPAAAAPA-APPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115

                   ....
gi 1767294007  355 SSVP 358
Cdd:PRK12270   116 EVTP 119
flhF PRK06995
flagellar biosynthesis protein FlhF;
302-386 8.68e-04

flagellar biosynthesis protein FlhF;


Pssm-ID: 235904 [Multi-domain]  Cd Length: 484  Bit Score: 42.65  E-value: 8.68e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 302 AASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDV 381
Cdd:PRK06995   44 ADSDLAALAPPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERA 123

                  ....*
gi 1767294007 382 PPTPK 386
Cdd:PRK06995  124 AAENA 128
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
287-371 1.06e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 42.64  E-value: 1.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 287 LEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVP 366
Cdd:PRK14948  510 LESQSGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPT 589

                  ....*
gi 1767294007 367 SEAPP 371
Cdd:PRK14948  590 KDSSP 594
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
318-406 1.21e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 42.57  E-value: 1.21e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  318 PSEVPPT----------PKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAP-PTPRSAAPSDVPPTPK 386
Cdd:PRK12270    22 PNSVDPSwreffadygpGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPkPAAAAAAAAAPAAPPA 101
                           90       100
                   ....*....|....*....|
gi 1767294007  387 SNGHIANGSIPGTPSVAQER 406
Cdd:PRK12270   102 AAAAAAPAAAAVEDEVTPLR 121
PHA02030 PHA02030
hypothetical protein
287-386 1.23e-03

hypothetical protein


Pssm-ID: 222843 [Multi-domain]  Cd Length: 336  Bit Score: 41.89  E-value: 1.23e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 287 LEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPtpksAAPSeVPLTPKSAAQSSVPPTPKSAVP 366
Cdd:PHA02030  247 LGGGEDLIIKPKSKAAGSNLPAVPNVAADAGSAAAPAVP--AAAAAVAQ----AAPS-VPQVPNVAVLPDVPQVAPVAAP 319
                          90       100
                  ....*....|....*....|
gi 1767294007 367 SeAPPTPrsAAPSdVPPTPK 386
Cdd:PHA02030  320 A-APEVP--AVPV-VPAAPQ 335
PHA03264 PHA03264
envelope glycoprotein D; Provisional
257-371 1.44e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 41.91  E-value: 1.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 257 FELQAPPEGKRPRTPNDlDNPTADEEPAAELEADAGSEVPPTPKTAAsekqsvPPTPKSAAPSEVPPTPksaapsevppt 336
Cdd:PHA03264  264 YEPPPAPSGGSPAPPGD-DRPEAKPEPGPVEDGAPGRETGGEGEGPE------PAGRDGAAGGEPKPGP----------- 325
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1767294007 337 PKSAAPSEVPLT-PKSAAQSSVPPTPKSAVPSEAPP 371
Cdd:PHA03264  326 PRPAPDADRPEGwPSLEAITFPPPTPATPAVPRARP 361
PHA02682 PHA02682
ORF080 virion core protein; Provisional
277-386 1.64e-03

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 41.39  E-value: 1.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAA--PSEVPLTPKSAAQ 354
Cdd:PHA02682   43 PDADVDPLDKYSVKEAGRYYQSRLKANSACMQRPSGQSPLAPSPACAAPAPACPACAPAAPAPAVtcPAPAPACPPATAP 122
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294007 355 SSVPPT--PKSAVPSEA-PPTPRSAAPSDVPPTPK 386
Cdd:PHA02682  123 TCPPPAvcPAPARPAPAcPPSTRQCPPAPPLPTPK 157
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
312-403 1.70e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.10  E-value: 1.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 312 TPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAaQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPksnghi 391
Cdd:PRK14950  344 TSYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPA-PSTRPKAAAAANIPPKEPVRETATPPPVPPRP------ 416
                          90
                  ....*....|..
gi 1767294007 392 ANGSIPGTPSVA 403
Cdd:PRK14950  417 VAPPVPHTPESA 428
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
291-371 1.72e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 41.16  E-value: 1.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 291 AGSEVPPTPKTAAseKQSVPPT-----PKSAAPSEVPPTPKSAAPSevpPTPKSAAPSEVPL-TPKSaaqssvpPTPKSa 364
Cdd:PRK13042   28 ANATTPSSTKVEA--PQSTPPStkveaPQSKPNATTPPSTKVEAPQ---QTPNATTPSSTKVeTPQS-------PTTKQ- 94

                  ....*..
gi 1767294007 365 VPSEAPP 371
Cdd:PRK13042   95 VPTEINP 101
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
262-388 1.89e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 41.29  E-value: 1.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 262 PPEGKRPRTPNDLDnPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPTPKSAA 341
Cdd:NF040712  200 ATVPRLAREPADAR-PEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGP--GAAPAAEPDEATRD 276
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1767294007 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSN 388
Cdd:NF040712  277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323
PRK14954 PRK14954
DNA polymerase III subunits gamma and tau; Provisional
293-367 1.89e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184918 [Multi-domain]  Cd Length: 620  Bit Score: 41.85  E-value: 1.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 293 SEVPPTPKTAASEKQSVPPTPKSAAPSEVPPT--------PKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA 364
Cdd:PRK14954  378 GGVAPSPAGSPDVKKKAPEPDLPQPDRHPGPAkpeapgarPAELPSPASAPTPEQQPPVARSAPLPPSPQASAPRNVASG 457

                  ...
gi 1767294007 365 VPS 367
Cdd:PRK14954  458 KPG 460
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
283-401 1.89e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.97  E-value: 1.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 283 PAAELEADAGSEVPPT----PKTAASEKQSVPPT----PKSAAPSEvPPTPKSAAPSEVPPtpkSAAPS------EVPLT 348
Cdd:PRK14959  367 PVESLRPSGGGASAPSgsaaEGPASGGAATIPTPgtqgPQGTAPAA-GMTPSSAAPATPAP---SAAPSprvpwdDAPPA 442
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1767294007 349 PksaAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHiANGSIPGTPS 401
Cdd:PRK14959  443 P---PRSGIPPRPAPRMPEASPVPGAPDSVASASDAPPTLGD-PSDTAEHTPS 491
PHA03264 PHA03264
envelope glycoprotein D; Provisional
309-400 2.16e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 41.53  E-value: 2.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 309 VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQ--SSVPPTPKSAVPSEAP---PTPRSAAPSdvPP 383
Cdd:PHA03264  254 VPPYFEESKGYEPPPAPSGGSPAPPGDDRPEAKPEPGPVEDGAPGRetGGEGEGPEPAGRDGAAggePKPGPPRPA--PD 331
                          90
                  ....*....|....*..
gi 1767294007 384 TPKSNGHIANGSIPGTP 400
Cdd:PHA03264  332 ADRPEGWPSLEAITFPP 348
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
278-349 2.33e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.21  E-value: 2.33e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007 278 TADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPK--SAAPSEVPPTPKSAAPSEVPPTPKSAA-PSE--VPLTP 349
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAasKPTPPAAAKPPEPAPAAKPPPTPVARAdPREtrVPMSR 196
Rib_recp_KP_reg pfam05104
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ...
283-372 2.88e-03

Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.


Pssm-ID: 461548 [Multi-domain]  Cd Length: 140  Bit Score: 38.95  E-value: 2.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 283 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAaPSEVPPTPKSAAPSEVP-PTPKSAAPSEVPLTPKSAAQSSVPPTP 361
Cdd:pfam05104  51 PESEQADESEEEPREFKTPDEAPSAALEPEPVPT-PVPAPVEPEPAPPSESPaPSPKEKKKKEKKSAKVEPAETPEAVQP 129
                          90
                  ....*....|.
gi 1767294007 362 KSAVPSEAPPT 372
Cdd:pfam05104 130 KPALEKEEPPA 140
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
262-423 2.91e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 41.21  E-value: 2.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 262 PPEGKRPRTPNDLDNPTADEEPAAeleadagsevPPTPKTAasekqSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAA 341
Cdd:PTZ00449  573 PTLSKKPEFPKDPKHPKDPEEPKK----------PKRPRSA-----QRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPP 637
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTP---------------RSAAPSDVPPTPKSNGHIANGSIPGTPSVAQER 406
Cdd:PTZ00449  638 PPQRPSSPERPEGPKIIKSPKPPKSPKPPFDPkfkekfyddyldaaaKSKETKTTVVLDESFESILKETLPETPGTPFTT 717
                         170
                  ....*....|....*..
gi 1767294007 407 VEPEPEPVAEEPEPVAE 423
Cdd:PTZ00449  718 PRPLPPKLPRDEEFPFE 734
PHA03369 PHA03369
capsid maturational protease; Provisional
291-382 2.99e-03

capsid maturational protease; Provisional


Pssm-ID: 223061 [Multi-domain]  Cd Length: 663  Bit Score: 41.14  E-value: 2.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 291 AGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAP 370
Cdd:PHA03369  356 PSRVLAAAAKVAVIAAPQTHTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPQSPGTSYGPEPVGP 435
                          90
                  ....*....|..
gi 1767294007 371 PTPRSAAPSDVP 382
Cdd:PHA03369  436 VPPQPTNPYVMP 447
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
304-388 3.04e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 41.10  E-value: 3.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 304 SEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSsvPPTPKSAVPSEAPPTPRSAAPsdvPP 383
Cdd:PRK14948  361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKAS--PPIPVPAEPTEPSPTPPANAA---NA 435

                  ....*
gi 1767294007 384 TPKSN 388
Cdd:PRK14948  436 PPSLN 440
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
308-396 3.12e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 41.10  E-value: 3.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 308 SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PRK14948  516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPE 595
                          90
                  ....*....|....*..
gi 1767294007 388 NGHIA--------NGSI 396
Cdd:PRK14948  596 EIDKAaknladffNGEI 612
PRK10856 PRK10856
cytoskeleton protein RodZ;
270-365 3.35e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 40.39  E-value: 3.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 270 TPNDLDNPTADEEPAAELEADAgseVPPTPKTAASEKQSVPPTPKSAA--PSEVPPTPKSAAPSEVPPTPKSAAPSEVPL 347
Cdd:PRK10856  160 QSVPLDTSTTTDPATTPAPAAP---VDTTPTNSQTPAVATAPAPAVDPqqNAVVAPSQANVDTAATPAPAAPATPDGAAP 236
                          90
                  ....*....|....*...
gi 1767294007 348 TPKSAAQSSVPPTPKSAV 365
Cdd:PRK10856  237 LPTDQAGVSTPAADPNAL 254
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
254-394 3.43e-03

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 41.15  E-value: 3.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 254 KQEFELqAPPEGKRPRTPNDLDNPTADEEpAAELEADAGSEVPPTPKTAASE-KQSVPPTPKSAAPSEVPPTPkSAAPSE 332
Cdd:NF033838  352 EAELEL-VKEEAKEPRNEEKIKQAKAKVE-SKKAEATRLEKIKTDRKKAEEEaKRKAAEEDKVKEKPAEQPQP-APAPQP 428
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767294007 333 VPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA------VPSEAPPTPRSAAPsdvPPTPKSNGHIANG 394
Cdd:NF033838  429 EKPAPKPEKPAEQPKAEKPADQQAEEDYARRSeeeynrLTQQQPPKTEKPAQ---PSTPKTGWKQENG 493
FAP pfam07174
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment ...
287-382 3.53e-03

Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment proteins (FAP). Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix.


Pssm-ID: 429334  Cd Length: 301  Bit Score: 40.29  E-value: 3.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 287 LEADAGSEVPPTPktaasekqsVPPTPKSAAPSEVPPTPKSAAPseVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVP 366
Cdd:pfam07174  33 LPAVAHADPEPAP---------PPPSTATAPPAPPPPPPAPAAP--APPPPPAAPNAPNAPPPPADPNAPPPPPADPNAP 101
                          90
                  ....*....|....*.
gi 1767294007 367 SEAPPTPRSAAPSDVP 382
Cdd:pfam07174 102 PPPAVDPNAPEPGRID 117
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
301-386 3.62e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 40.39  E-value: 3.62e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 301 TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSevpPTPKSAAPSEVPL-TPKSAAQSSVPPTPKSAVPsEAPPTPRsaAPS 379
Cdd:PRK13042   24 TTQAANATTPSSTKVEAPQSTPPSTKVEAPQ---SKPNATTPPSTKVeAPQQTPNATTPSSTKVETP-QSPTTKQ--VPT 97

                  ....*..
gi 1767294007 380 DVPPTPK 386
Cdd:PRK13042   98 EINPKFK 104
PRK12373 PRK12373
NADH-quinone oxidoreductase subunit E;
268-380 3.87e-03

NADH-quinone oxidoreductase subunit E;


Pssm-ID: 237082 [Multi-domain]  Cd Length: 400  Bit Score: 40.56  E-value: 3.87e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 268 PRTPNDLDNPTADEEPAAELEADaGSEVPPTP---KTAASEKQSVPPTPKSAAPsEVPPTPKSAAPSEVPPTPKSAAPSE 344
Cdd:PRK12373  202 GKARYNASKALAEDIGDTVKRID-GTEVPLLApwqGDAAPVPPSEAARPKSADA-ETNAALKTPATAPKAAAKNAKAPEA 279
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1767294007 345 VPLTPKSAAQSSVPPTPKSAVPSEAPP---------TPRSAAPSD 380
Cdd:PRK12373  280 QPVSGTAAAEPAPKEAAKAAAAAAKPAledkprplgIARPGGADD 324
rad23 TIGR00601
UV excision repair protein Rad23; All proteins in this family for which functions are known ...
299-380 5.79e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273167 [Multi-domain]  Cd Length: 378  Bit Score: 39.88  E-value: 5.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 299 PKTAASEKQSVPPTPKSAapsevpPTPKSAAPseVPPTPKSAAPsevpltPKSAAQSSVPPTPKSAVPSEAPPTPRSAAP 378
Cdd:TIGR00601  77 PKTGTGKVAPPAATPTSA------PTPTPSPP--ASPASGMSAA------PASAVEEKSPSEESATATAPESPSTSVPSS 142

                  ..
gi 1767294007 379 SD 380
Cdd:TIGR00601 143 GS 144
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
316-387 6.48e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.37  E-value: 6.48e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294007 316 AAPSEVPPTPKSAAPsEVPPTPKSAAPSEVPlTPKSAAQSSVPPTPKSAVPsEAPPTPRSAAPSDVPPTPKS 387
Cdd:COG5373    38 AEAAEAASAPAEPEP-EAAAAATAAAPEAAP-APVPEAPAAPPAAAEAPAP-AAAAPPAEAEPAAAPAAASS 106
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
277-386 6.75e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 40.23  E-value: 6.75e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSA----------APSEVPPTPKSAAPSEVPPTPKSAAPSevP 346
Cdd:PRK07994  381 AQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqllaarqqlqRAQGATKAKKSEPAAASRARPVNSALE--R 458
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1767294007 347 LTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPK 386
Cdd:PRK07994  459 LASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPK 498
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
301-413 6.98e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 39.85  E-value: 6.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 301 TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSD 380
Cdd:PRK07994  367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAA 446
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1767294007 381 VPPTPksnghiANGSIPGTPSVAQERVEPEPEP 413
Cdd:PRK07994  447 SRARP------VNSALERLASVRPAPSALEKAP 473
PLN02983 PLN02983
biotin carboxyl carrier protein of acetyl-CoA carboxylase
294-359 7.47e-03

biotin carboxyl carrier protein of acetyl-CoA carboxylase


Pssm-ID: 215533 [Multi-domain]  Cd Length: 274  Bit Score: 39.44  E-value: 7.47e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767294007 294 EVPPTPKTAASEKQSVPPTPKSAAPseVPPTPKSAAPSEVPPTPKSAAPSEvplTPKSAAQSSVPP 359
Cdd:PLN02983  139 EALPQPPPPAPVVMMQPPPPHAMPP--ASPPAAQPAPSAPASSPPPTPASP---PPAKAPKSSHPP 199
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
261-386 9.01e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.77  E-value: 9.01e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PHA03307   779 EPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPPPARSSESSKSKP 858
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 1767294007  341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPK 386
Cdd:PHA03307   859 AAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPR 904
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
277-455 9.12e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 39.83  E-value: 9.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVP---PTPKTAASEKQSVPPTPKSAAPSEvPPTPKSAAPseVPPTPKSAAPSEVPLTPKSAA 353
Cdd:PRK07003  362 VTGGGAPGGGVPARVAGAVPapgARAAAAVGASAVPAVTAVTGAAGA-ALAPKAAAA--AAATRAEAPPAAPAPPATADR 438
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 354 QSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTPSVAQERVEPEPEPVAEEPEPVAEPEPEPEPVAE 433
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASR 518
                         170       180
                  ....*....|....*....|..
gi 1767294007 434 AEPEAEPAVEEEPAEEPEPAAD 455
Cdd:PRK07003  519 EDAPAAAAPPAPEARPPTPAAA 540
PRK06975 PRK06975
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
279-349 9.68e-03

bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed


Pssm-ID: 235899 [Multi-domain]  Cd Length: 656  Bit Score: 39.70  E-value: 9.68e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767294007 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAApsevpPTPKSAAPSEVPPTPKSAAPSEVPLTP 349
Cdd:PRK06975  254 GDERIVRAFLTWADAAAQPATAAPAPSRMTDTNDSKSVT-----SQPAAAAAAPAPPPNPPATPPEPPARR 319
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
261-557 9.80e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.77  E-value: 9.80e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  261 APPEGKRPRTPNDlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PHA03307   111 PSSPDPPPPTPPP-ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSP 189
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSiPGTPSVAQERVEPEPEPVAEEPEP 420
Cdd:PHA03307   190 PAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSES-SGCGWGPENECPLPRPAPITLPTR 268
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007  421 VAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPA 500
Cdd:PHA03307   269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS 348
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007  501 RRRPQSPSPERQRTSRHADRdITSYDEDSYRAVPPPRMPTATSFSSWSPPDKQSYTP 557
Cdd:PHA03307   349 RSPSPSRPPPPADPSSPRKR-PRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDAT 404
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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