|
Name |
Accession |
Description |
Interval |
E-value |
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
261-379 |
1.89e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 64.87 E-value: 1.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PRK07003 425 APPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATP 504
|
90 100 110
....*....|....*....|....*....|....*....
gi 1767294007 341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK07003 505 AAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPA 543
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
298-395 |
5.75e-08 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 56.36 E-value: 5.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 298 TPKTAAsekqsVPPTPKSAAPSEVPPTPksaAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPP----TPKSAVPSEAPPTP 373
Cdd:PRK14950 361 VPVPAP-----QPAKPTAAAPSPVRPTP---APSTRPKAAAAANIPPKEPVRETATPPPVPPrpvaPPVPHTPESAPKLT 432
|
90 100
....*....|....*....|....*...
gi 1767294007 374 RSAAPSDV------PPTPKSNGHIANGS 395
Cdd:PRK14950 433 RAAIPVDEkpkytpPAPPKEEEKALIAD 460
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
261-400 |
6.98e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.87 E-value: 6.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 261 APPEGKRPRTPNDLDNPTADEEPAAeleaDAGSEVPPTPKTAASEKQSVPPT-PKSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PHA03247 2726 AAARQASPALPAAPAPPAVPAGPAT----PGGPARPARPPTTAGPPAPAPPAaPAAGPPRRLTRPAVASLSESRESLPSP 2801
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767294007 340 AAPSEVPlTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTP 400
Cdd:PHA03247 2802 WDPADPP-AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGD 2861
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
261-400 |
9.46e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.49 E-value: 9.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPktAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPP----- 335
Cdd:PHA03247 2591 APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPP--SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRprrar 2668
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 336 ----TPKSAAPSEVPLTPksAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNG-HIANGSIPGTP 400
Cdd:PHA03247 2669 rlgrAAQASSPPQRPRRR--AARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGpAAARQASPALP 2736
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
258-387 |
1.14e-07 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 55.85 E-value: 1.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 258 ELQAPPEGKRPRTPNDLDnPTADEEPAAELEadagsevpPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTP 337
Cdd:PTZ00449 539 ESDEPKEGGKPGETKEGE-VGKKPGPAKEHK--------PSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRP 609
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1767294007 338 KSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PTZ00449 610 KSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKP 659
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
296-392 |
4.68e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 53.66 E-value: 4.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 296 PPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSaaqssvppTPKSAVPSEAPPTPRS 375
Cdd:PRK14950 363 VPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVA--------PPVPHTPESAPKLTRA 434
|
90 100
....*....|....*....|..
gi 1767294007 376 AAPSDV-----PPTPKSNGHIA 392
Cdd:PRK14950 435 AIPVDEkpkytPPAPPKEEEKA 456
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
257-353 |
6.75e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.36 E-value: 6.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 257 FELQAPPEGKRPRTPndlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPT 336
Cdd:PRK12270 33 FADYGPGSTAAPTAA---AAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109
|
90
....*....|....*..
gi 1767294007 337 PKSAAPSEVPLTPKSAA 353
Cdd:PRK12270 110 AAAVEDEVTPLRGAAAA 126
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
302-387 |
1.15e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.41 E-value: 1.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 302 AASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPsevpltpksAAQSSVPPTPKSAVPSEAPPTPRSAAPSDV 381
Cdd:PRK14951 375 PAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPA---------APPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445
|
....*.
gi 1767294007 382 PPTPKS 387
Cdd:PRK14951 446 ALAPAP 451
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
305-386 |
2.14e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.81 E-value: 2.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 305 EKQSVPPT---------PKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRS 375
Cdd:PRK12270 21 DPNSVDPSwreffadygPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP 100
|
90
....*....|.
gi 1767294007 376 AAPSDVPPTPK 386
Cdd:PRK12270 101 AAAAAAAPAAA 111
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
274-375 |
2.39e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.43 E-value: 2.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 274 LDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPsevPPTPKSAAPSEVPLTPKSAA 353
Cdd:PRK12270 19 LADPNSVDPSWREFFADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP---AAAAPAAPPKPAAAAAAAAA 95
|
90 100
....*....|....*....|..
gi 1767294007 354 QSSVPPTPKSAVPSEAPPTPRS 375
Cdd:PRK12270 96 PAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
313-384 |
1.57e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.56 E-value: 1.57e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294007 313 PKSAAPSEVPPTPKSAAPsevpptPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPT 384
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPAR------PEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAA 431
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
260-374 |
1.66e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 48.62 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 260 QAPPEGKRPRTPNDLDNPtADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPkSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PRK14971 364 QKGDDASGGRGPKQHIKP-VFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQS-ATQPAGTPPTVSVDPPAAVPVNPPS 441
|
90 100 110
....*....|....*....|....*....|....*
gi 1767294007 340 AAPSEVPLTPKSAAQssvpPTPKSAVPSEAPPTPR 374
Cdd:PRK14971 442 TAPQAVRPAQFKEEK----KIPVSKVSSLGPSTLR 472
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
259-401 |
2.24e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 48.37 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 259 LQAPPEGKRPRTPNDLDNPTadeePAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPK 338
Cdd:pfam05109 458 LTAPASTGPTVSTADVTSPT----PAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPN 533
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 339 SAAPSEVPLTPKSAAQSSVP-----------PTPKSAVPS---EAP------PTPRSAAPSDVPPTPKSNghIANGSIPG 398
Cdd:pfam05109 534 ATSPTLGKTSPTSAVTTPTPnatsptpavttPTPNATIPTlgkTSPtsavttPTPNATSPTVGETSPQAN--TTNHTLGG 611
|
...
gi 1767294007 399 TPS 401
Cdd:pfam05109 612 TSS 614
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
277-379 |
2.27e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.06 E-value: 2.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS 356
Cdd:PRK07764 401 AAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAP 480
|
90 100
....*....|....*....|...
gi 1767294007 357 VPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK07764 481 APAPPAAPAPAAAPAAPAAPAAP 503
|
|
| flhF |
PRK06995 |
flagellar biosynthesis protein FlhF; |
279-385 |
2.43e-05 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 47.65 E-value: 2.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPP--TPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS 356
Cdd:PRK06995 44 ADSDLAALAPPAAAAPAAAQPPPAAAPAAVSRPaaPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERA 123
|
90 100
....*....|....*....|....*....
gi 1767294007 357 VPPTPKSAVPSEAPPTPRSAAPSDVPPTP 385
Cdd:PRK06995 124 AAENAARRLARAAAAAPRPRVPADAAAAV 152
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
277-383 |
2.66e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.95 E-value: 2.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAA-SEKQSVPPTPKSAAPSEVP---------PTPKSAAPSEVPPTPKSAAPsevp 346
Cdd:PRK12323 388 AAAAPAAAAPAPAAPPAAPAAAPAAAAaARAVAAAPARRSPAPEALAaarqasargPGGAPAPAPAPAAAPAAAAR---- 463
|
90 100 110
....*....|....*....|....*....|....*..
gi 1767294007 347 ltPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPP 383
Cdd:PRK12323 464 --PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPP 498
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
277-390 |
4.20e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 47.29 E-value: 4.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEvPPTPKTAASEKQSVPPTPKSA-APSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQS 355
Cdd:PRK07764 394 PAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPApAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAA 472
|
90 100 110
....*....|....*....|....*....|....*
gi 1767294007 356 SVPPTPKSAvpSEAPPTPRSAAPSDVPPTPKSNGH 390
Cdd:PRK07764 473 APEPTAAPA--PAPPAAPAPAAAPAAPAAPAAPAG 505
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
278-404 |
4.25e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 47.23 E-value: 4.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 278 TADEEPAAELEADAGSEVPPTPKTAASEKqsvpptPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSevPLTPKSAAQSSV 357
Cdd:PLN03209 310 TAPLTPMEELLAKIPSQRVPPKESDAADG------PKPVPTKPVTPEAPSPPIEEEPPQPKAVVPR--PLSPYTAYEDLK 381
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1767294007 358 PPTPksavPSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTPSVAQ 404
Cdd:PLN03209 382 PPTS----PIPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSASNVPE 424
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
279-385 |
4.42e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 47.29 E-value: 4.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPtpksAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVP 358
Cdd:PRK07764 390 GAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPA----PAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465
|
90 100
....*....|....*....|....*..
gi 1767294007 359 PTPKSAVPSEAPPTPRSAAPSDVPPTP 385
Cdd:PRK07764 466 PAPAPAAAPEPTAAPAPAPPAAPAPAA 492
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
302-385 |
4.52e-05 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.56 E-value: 4.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 302 AASEKQSVPPTPKSAAPSevPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS--VPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK10856 155 SQNSGQSVPLDTSTTTDP--ATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNavVAPSQANVDTAATPAPAAPATPD 232
|
....*.
gi 1767294007 380 DVPPTP 385
Cdd:PRK10856 233 GAAPLP 238
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
284-380 |
4.68e-05 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.56 E-value: 4.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 284 AAELEADAGSEVPPTPKTAASEKQ---SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPT 360
Cdd:PRK10856 151 SAELSQNSGQSVPLDTSTTTDPATtpaPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPAT 230
|
90 100
....*....|....*....|
gi 1767294007 361 PKSAVPSEAPPTPRSAAPSD 380
Cdd:PRK10856 231 PDGAAPLPTDQAGVSTPAAD 250
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
277-381 |
5.02e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 5.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS 356
Cdd:PRK07764 406 PAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPP 485
|
90 100
....*....|....*....|....*
gi 1767294007 357 VPPTPKSAVPSEAPPTPrSAAPSDV 381
Cdd:PRK07764 486 AAPAPAAAPAAPAAPAA-PAGADDA 509
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
260-373 |
6.97e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.63 E-value: 6.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 260 QAPPEGKRPRTPndldnPTADEEPAAeleADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PRK14951 385 EAAAPAAAPVAQ-----AAAAPAPAA---APAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAA 456
|
90 100 110
....*....|....*....|....*....|....
gi 1767294007 340 AAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTP 373
Cdd:PRK14951 457 PETVAIPVRVAPEPAVASAAPAPAAAPAAARLTP 490
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
277-378 |
1.02e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.61 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTP-KTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPlTPKSAAQS 355
Cdd:PRK11633 45 PKPGDRDEPDMMPAATQALPTQPpEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKP-KPKPKPQQ 123
|
90 100
....*....|....*....|...
gi 1767294007 356 SVPPTPKSAvPSEAPPTPRSAAP 378
Cdd:PRK11633 124 KVEAPPAPK-PEPKPVVEEKAAP 145
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
283-388 |
1.22e-04 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 45.49 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 283 PAAELEADAGSEVP---PTPKTAASEKQSVPPTPKSAAPSEVPP--TPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSV 357
Cdd:PHA03269 27 PIPELHTSAATQKPdpaPAPHQAASRAPDPAVAPTSAASRKPDLaqAPTPAASEKFDPAPAPHQAASRAPDPAVAPQLAA 106
|
90 100 110
....*....|....*....|....*....|....*...
gi 1767294007 358 PPTPKSAVPSEAPPTpRSAAPSDVP-------PTPKSN 388
Cdd:PHA03269 107 APKPDAAEAFTSAAQ-AHEAPADAGtsaaskkPDPAAH 143
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
262-387 |
1.62e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 45.30 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 262 PPEGKRPRtPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPsEVPPTPKSAA 341
Cdd:PLN03209 390 PPSSSPAS-SKSVDAVAKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTA-PTGVSPSVSS 467
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1767294007 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PLN03209 468 TSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPS 513
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
277-441 |
2.29e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSA-APSEVPPTP---------KSAAPSEVPPTPKSAAPSEVP 346
Cdd:PRK12323 381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAaAPARRSPAPealaaarqaSARGPGGAPAPAPAPAAAPAA 460
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 347 LTPKSAAQSSVPPTPKSAVPS-EAPPTPRSAAPSDVPPTPKSNGHIAngSIPGTPSVAQERVEPEPEPVAEEPEPVAEPE 425
Cdd:PRK12323 461 AARPAAAGPRPVAAAAAAAPArAAPAAAPAPADDDPPPWEELPPEFA--SPAPAQPDAAPAGWVAESIPDPATADPDDAF 538
|
170
....*....|....*.
gi 1767294007 426 PEPEPVAEAEPEAEPA 441
Cdd:PRK12323 539 ETLAPAPAAAPAPRAA 554
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
279-393 |
2.60e-04 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 44.69 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 279 ADEE-----PAAELEADA---GSEVPPTPKTAASEKQSVPPTPK-SAAPSEVPPTPKSAAPSEVPPT-PKSAAPSEVPLT 348
Cdd:PLN02217 531 SDEEilkftPAQYIQGDAwipGKGVPYIPGLFAGNPGSTNSTPTgSAASSNTTFSSDSPSTVVAPSTsPPAGHLGSPPAT 610
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1767294007 349 P-KSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPT--PKSNGHIAN 393
Cdd:PLN02217 611 PsKIVSPSTSPPASHLGSPSTTPSSPESSIKVASTETasPESSIKVAS 658
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
312-387 |
2.76e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 43.85 E-value: 2.76e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007 312 TPKSAAPSEVPPTPKSAAPSEVPPTPKsaapsevPLTPKSAAQSSVPPTPKSAVPSEAP-PTPRSAAPSDVPPTPKS 387
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTK-------VEAPQSKPNATTPPSTKVEAPQQTPnATTPSSTKVETPQSPTT 92
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
260-412 |
3.36e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.59 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 260 QAPPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PRK07764 631 GAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPP 710
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767294007 340 AAPSEVPLT-PKSAAQSSVPPTPKSAVPSEAPPTPRSA-APSDVPPTPKSNGHIANgsiPGTPSVAQERVEPEPE 412
Cdd:PRK07764 711 AGQADDPAAqPPQAAQGASAPSPAADDPVPLPPEPDDPpDPAGAPAQPPPPPAPAP---AAAPAAAPPPSPPSEE 782
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
316-397 |
3.36e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.42 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 316 AAPSEVPPTPKSAAPSEVPPTPksaAPSEvplTPKSAAQSSVPPT-PKSAVPSEAPPTPRSAAPSdVPPTPKSNGHIANG 394
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTP---APST---RPKAAAAANIPPKePVRETATPPPVPPRPVAPP-VPHTPESAPKLTRA 434
|
...
gi 1767294007 395 SIP 397
Cdd:PRK14950 435 AIP 437
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
283-385 |
4.46e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.00 E-value: 4.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 283 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTpk 362
Cdd:PRK14971 363 TQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPP-- 440
|
90 100
....*....|....*....|...
gi 1767294007 363 SAVPSEAPPTPrsaAPSDVPPTP 385
Cdd:PRK14971 441 STAPQAVRPAQ---FKEEKKIPV 460
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
270-357 |
4.84e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.09 E-value: 4.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 270 TPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPsevPLTP 349
Cdd:PRK10856 171 DPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAG---VSTP 247
|
....*...
gi 1767294007 350 KSAAQSSV 357
Cdd:PRK10856 248 AADPNALV 255
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
276-385 |
5.06e-04 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 43.19 E-value: 5.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 276 NPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPltpksaaQS 355
Cdd:PRK13335 53 NITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTT-------ES 125
|
90 100 110
....*....|....*....|....*....|
gi 1767294007 356 SVPPTPKSAVPSEAPPTPRSAAPSDVPPTP 385
Cdd:PRK13335 126 TTPKTKVTTPPSTNTPQPMQSTKSDTPQSP 155
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
289-404 |
5.45e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.82 E-value: 5.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 289 ADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVP---PTPKSAV 365
Cdd:PRK07764 389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPaaaPSAQPAP 468
|
90 100 110
....*....|....*....|....*....|....*....
gi 1767294007 366 PSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTPSVAQ 404
Cdd:PRK07764 469 APAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGAD 507
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
279-370 |
5.65e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.73 E-value: 5.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 279 ADEEPAAeleADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPP--TPKSAAPSEVPPTPKSAAPSevpltPKSAAQSS 356
Cdd:PRK12270 34 ADYGPGS---TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPaaAAPAAPPKPAAAAAAAAAPA-----APPAAAAA 105
|
90
....*....|....
gi 1767294007 357 VPPTPKSAVPSEAP 370
Cdd:PRK12270 106 AAPAAAAVEDEVTP 119
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
277-372 |
5.88e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.30 E-value: 5.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAElEADAGSEVPPT--PKTAASEKQSVPPTPKSAAPSEVPPTPKsaapseVPPTPKSAAPSEVPLTPKsaaq 354
Cdd:PRK11633 64 PTQPPEGAAE-AVRAGDAAAPSldPATVAPPNTPVEPEPAPVEPPKPKPVEK------PKPKPKPQQKVEAPPAPK---- 132
|
90
....*....|....*...
gi 1767294007 355 ssvpPTPKSAVPSEAPPT 372
Cdd:PRK11633 133 ----PEPKPVVEEKAAPT 146
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
263-385 |
6.01e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.71 E-value: 6.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 263 PEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPksaAP 342
Cdd:PRK12323 444 PGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAP---AG 520
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1767294007 343 SEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSD--VPPTP 385
Cdd:PRK12323 521 WVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEpvVAPRP 565
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
263-384 |
6.48e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.41 E-value: 6.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 263 PEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPK------SAAPSEVPPTPKS--------- 327
Cdd:pfam17823 301 AQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKaqakepSASPVPVLHTSMIpeveatspt 380
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007 328 AAPSEVPPTPKSAAPSeVPLTPKSAAQSSVPPTpksavpSEAPPTPRSAAPSDVPPT 384
Cdd:pfam17823 381 TQPSPLLPTQGAAGPG-ILLAPEQVATEATAGT------ASAGPTPRSSGDPKTLAM 430
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
279-385 |
7.53e-04 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 42.63 E-value: 7.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAApseVPPTPKSAAPSEVPLTPKSA----AQ 354
Cdd:PTZ00436 239 AAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAA---APPAKAAAAPAKAAAAPAKAaaapAK 315
|
90 100 110
....*....|....*....|....*....|...
gi 1767294007 355 SSVPPTPKSAVPSEA--PPTPRSAAPSDVPPTP 385
Cdd:PTZ00436 316 AAAPPAKAAAPPAKAatPPAKAAAPPAKAAAAP 348
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
276-358 |
8.14e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.34 E-value: 8.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 276 NPTADEEPAAELEADAGSEVPPTPKTAASEKQ-SVPPTPKSAAPSeVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQ 354
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAaPAPAPPAAAAPA-APPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115
|
....
gi 1767294007 355 SSVP 358
Cdd:PRK12270 116 EVTP 119
|
|
| flhF |
PRK06995 |
flagellar biosynthesis protein FlhF; |
302-386 |
8.68e-04 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 42.65 E-value: 8.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 302 AASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDV 381
Cdd:PRK06995 44 ADSDLAALAPPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERA 123
|
....*
gi 1767294007 382 PPTPK 386
Cdd:PRK06995 124 AAENA 128
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
287-371 |
1.06e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 42.64 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 287 LEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVP 366
Cdd:PRK14948 510 LESQSGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPT 589
|
....*
gi 1767294007 367 SEAPP 371
Cdd:PRK14948 590 KDSSP 594
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
318-406 |
1.21e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.57 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 318 PSEVPPT----------PKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAP-PTPRSAAPSDVPPTPK 386
Cdd:PRK12270 22 PNSVDPSwreffadygpGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPkPAAAAAAAAAPAAPPA 101
|
90 100
....*....|....*....|
gi 1767294007 387 SNGHIANGSIPGTPSVAQER 406
Cdd:PRK12270 102 AAAAAAPAAAAVEDEVTPLR 121
|
|
| PHA02030 |
PHA02030 |
hypothetical protein |
287-386 |
1.23e-03 |
|
hypothetical protein
Pssm-ID: 222843 [Multi-domain] Cd Length: 336 Bit Score: 41.89 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 287 LEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPtpksAAPSeVPLTPKSAAQSSVPPTPKSAVP 366
Cdd:PHA02030 247 LGGGEDLIIKPKSKAAGSNLPAVPNVAADAGSAAAPAVP--AAAAAVAQ----AAPS-VPQVPNVAVLPDVPQVAPVAAP 319
|
90 100
....*....|....*....|
gi 1767294007 367 SeAPPTPrsAAPSdVPPTPK 386
Cdd:PHA02030 320 A-APEVP--AVPV-VPAAPQ 335
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
257-371 |
1.44e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 41.91 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 257 FELQAPPEGKRPRTPNDlDNPTADEEPAAELEADAGSEVPPTPKTAAsekqsvPPTPKSAAPSEVPPTPksaapsevppt 336
Cdd:PHA03264 264 YEPPPAPSGGSPAPPGD-DRPEAKPEPGPVEDGAPGRETGGEGEGPE------PAGRDGAAGGEPKPGP----------- 325
|
90 100 110
....*....|....*....|....*....|....*.
gi 1767294007 337 PKSAAPSEVPLT-PKSAAQSSVPPTPKSAVPSEAPP 371
Cdd:PHA03264 326 PRPAPDADRPEGwPSLEAITFPPPTPATPAVPRARP 361
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
277-386 |
1.64e-03 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 41.39 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAA--PSEVPLTPKSAAQ 354
Cdd:PHA02682 43 PDADVDPLDKYSVKEAGRYYQSRLKANSACMQRPSGQSPLAPSPACAAPAPACPACAPAAPAPAVtcPAPAPACPPATAP 122
|
90 100 110
....*....|....*....|....*....|....*
gi 1767294007 355 SSVPPT--PKSAVPSEA-PPTPRSAAPSDVPPTPK 386
Cdd:PHA02682 123 TCPPPAvcPAPARPAPAcPPSTRQCPPAPPLPTPK 157
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
312-403 |
1.70e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.10 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 312 TPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAaQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPksnghi 391
Cdd:PRK14950 344 TSYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPA-PSTRPKAAAAANIPPKEPVRETATPPPVPPRP------ 416
|
90
....*....|..
gi 1767294007 392 ANGSIPGTPSVA 403
Cdd:PRK14950 417 VAPPVPHTPESA 428
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
291-371 |
1.72e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 41.16 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 291 AGSEVPPTPKTAAseKQSVPPT-----PKSAAPSEVPPTPKSAAPSevpPTPKSAAPSEVPL-TPKSaaqssvpPTPKSa 364
Cdd:PRK13042 28 ANATTPSSTKVEA--PQSTPPStkveaPQSKPNATTPPSTKVEAPQ---QTPNATTPSSTKVeTPQS-------PTTKQ- 94
|
....*..
gi 1767294007 365 VPSEAPP 371
Cdd:PRK13042 95 VPTEINP 101
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
262-388 |
1.89e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 41.29 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 262 PPEGKRPRTPNDLDnPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPTPKSAA 341
Cdd:NF040712 200 ATVPRLAREPADAR-PEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGP--GAAPAAEPDEATRD 276
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1767294007 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSN 388
Cdd:NF040712 277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
293-367 |
1.89e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.85 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 293 SEVPPTPKTAASEKQSVPPTPKSAAPSEVPPT--------PKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA 364
Cdd:PRK14954 378 GGVAPSPAGSPDVKKKAPEPDLPQPDRHPGPAkpeapgarPAELPSPASAPTPEQQPPVARSAPLPPSPQASAPRNVASG 457
|
...
gi 1767294007 365 VPS 367
Cdd:PRK14954 458 KPG 460
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
283-401 |
1.89e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 41.97 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 283 PAAELEADAGSEVPPT----PKTAASEKQSVPPT----PKSAAPSEvPPTPKSAAPSEVPPtpkSAAPS------EVPLT 348
Cdd:PRK14959 367 PVESLRPSGGGASAPSgsaaEGPASGGAATIPTPgtqgPQGTAPAA-GMTPSSAAPATPAP---SAAPSprvpwdDAPPA 442
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1767294007 349 PksaAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHiANGSIPGTPS 401
Cdd:PRK14959 443 P---PRSGIPPRPAPRMPEASPVPGAPDSVASASDAPPTLGD-PSDTAEHTPS 491
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
309-400 |
2.16e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 41.53 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 309 VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQ--SSVPPTPKSAVPSEAP---PTPRSAAPSdvPP 383
Cdd:PHA03264 254 VPPYFEESKGYEPPPAPSGGSPAPPGDDRPEAKPEPGPVEDGAPGRetGGEGEGPEPAGRDGAAggePKPGPPRPA--PD 331
|
90
....*....|....*..
gi 1767294007 384 TPKSNGHIANGSIPGTP 400
Cdd:PHA03264 332 ADRPEGWPSLEAITFPP 348
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
278-349 |
2.33e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 2.33e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007 278 TADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPK--SAAPSEVPPTPKSAAPSEVPPTPKSAA-PSE--VPLTP 349
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAasKPTPPAAAKPPEPAPAAKPPPTPVARAdPREtrVPMSR 196
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
283-372 |
2.88e-03 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 38.95 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 283 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAaPSEVPPTPKSAAPSEVP-PTPKSAAPSEVPLTPKSAAQSSVPPTP 361
Cdd:pfam05104 51 PESEQADESEEEPREFKTPDEAPSAALEPEPVPT-PVPAPVEPEPAPPSESPaPSPKEKKKKEKKSAKVEPAETPEAVQP 129
|
90
....*....|.
gi 1767294007 362 KSAVPSEAPPT 372
Cdd:pfam05104 130 KPALEKEEPPA 140
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
262-423 |
2.91e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 41.21 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 262 PPEGKRPRTPNDLDNPTADEEPAAeleadagsevPPTPKTAasekqSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAA 341
Cdd:PTZ00449 573 PTLSKKPEFPKDPKHPKDPEEPKK----------PKRPRSA-----QRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPP 637
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTP---------------RSAAPSDVPPTPKSNGHIANGSIPGTPSVAQER 406
Cdd:PTZ00449 638 PPQRPSSPERPEGPKIIKSPKPPKSPKPPFDPkfkekfyddyldaaaKSKETKTTVVLDESFESILKETLPETPGTPFTT 717
|
170
....*....|....*..
gi 1767294007 407 VEPEPEPVAEEPEPVAE 423
Cdd:PTZ00449 718 PRPLPPKLPRDEEFPFE 734
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
291-382 |
2.99e-03 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 41.14 E-value: 2.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 291 AGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAP 370
Cdd:PHA03369 356 PSRVLAAAAKVAVIAAPQTHTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPQSPGTSYGPEPVGP 435
|
90
....*....|..
gi 1767294007 371 PTPRSAAPSDVP 382
Cdd:PHA03369 436 VPPQPTNPYVMP 447
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
304-388 |
3.04e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 41.10 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 304 SEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSsvPPTPKSAVPSEAPPTPRSAAPsdvPP 383
Cdd:PRK14948 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKAS--PPIPVPAEPTEPSPTPPANAA---NA 435
|
....*
gi 1767294007 384 TPKSN 388
Cdd:PRK14948 436 PPSLN 440
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
308-396 |
3.12e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 41.10 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 308 SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PRK14948 516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPE 595
|
90
....*....|....*..
gi 1767294007 388 NGHIA--------NGSI 396
Cdd:PRK14948 596 EIDKAaknladffNGEI 612
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
270-365 |
3.35e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 40.39 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 270 TPNDLDNPTADEEPAAELEADAgseVPPTPKTAASEKQSVPPTPKSAA--PSEVPPTPKSAAPSEVPPTPKSAAPSEVPL 347
Cdd:PRK10856 160 QSVPLDTSTTTDPATTPAPAAP---VDTTPTNSQTPAVATAPAPAVDPqqNAVVAPSQANVDTAATPAPAAPATPDGAAP 236
|
90
....*....|....*...
gi 1767294007 348 TPKSAAQSSVPPTPKSAV 365
Cdd:PRK10856 237 LPTDQAGVSTPAADPNAL 254
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
254-394 |
3.43e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.15 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 254 KQEFELqAPPEGKRPRTPNDLDNPTADEEpAAELEADAGSEVPPTPKTAASE-KQSVPPTPKSAAPSEVPPTPkSAAPSE 332
Cdd:NF033838 352 EAELEL-VKEEAKEPRNEEKIKQAKAKVE-SKKAEATRLEKIKTDRKKAEEEaKRKAAEEDKVKEKPAEQPQP-APAPQP 428
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767294007 333 VPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA------VPSEAPPTPRSAAPsdvPPTPKSNGHIANG 394
Cdd:NF033838 429 EKPAPKPEKPAEQPKAEKPADQQAEEDYARRSeeeynrLTQQQPPKTEKPAQ---PSTPKTGWKQENG 493
|
|
| FAP |
pfam07174 |
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment ... |
287-382 |
3.53e-03 |
|
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment proteins (FAP). Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix.
Pssm-ID: 429334 Cd Length: 301 Bit Score: 40.29 E-value: 3.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 287 LEADAGSEVPPTPktaasekqsVPPTPKSAAPSEVPPTPKSAAPseVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVP 366
Cdd:pfam07174 33 LPAVAHADPEPAP---------PPPSTATAPPAPPPPPPAPAAP--APPPPPAAPNAPNAPPPPADPNAPPPPPADPNAP 101
|
90
....*....|....*.
gi 1767294007 367 SEAPPTPRSAAPSDVP 382
Cdd:pfam07174 102 PPPAVDPNAPEPGRID 117
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
301-386 |
3.62e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.39 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 301 TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSevpPTPKSAAPSEVPL-TPKSAAQSSVPPTPKSAVPsEAPPTPRsaAPS 379
Cdd:PRK13042 24 TTQAANATTPSSTKVEAPQSTPPSTKVEAPQ---SKPNATTPPSTKVeAPQQTPNATTPSSTKVETP-QSPTTKQ--VPT 97
|
....*..
gi 1767294007 380 DVPPTPK 386
Cdd:PRK13042 98 EINPKFK 104
|
|
| PRK12373 |
PRK12373 |
NADH-quinone oxidoreductase subunit E; |
268-380 |
3.87e-03 |
|
NADH-quinone oxidoreductase subunit E;
Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 40.56 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 268 PRTPNDLDNPTADEEPAAELEADaGSEVPPTP---KTAASEKQSVPPTPKSAAPsEVPPTPKSAAPSEVPPTPKSAAPSE 344
Cdd:PRK12373 202 GKARYNASKALAEDIGDTVKRID-GTEVPLLApwqGDAAPVPPSEAARPKSADA-ETNAALKTPATAPKAAAKNAKAPEA 279
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1767294007 345 VPLTPKSAAQSSVPPTPKSAVPSEAPP---------TPRSAAPSD 380
Cdd:PRK12373 280 QPVSGTAAAEPAPKEAAKAAAAAAKPAledkprplgIARPGGADD 324
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
299-380 |
5.79e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.88 E-value: 5.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 299 PKTAASEKQSVPPTPKSAapsevpPTPKSAAPseVPPTPKSAAPsevpltPKSAAQSSVPPTPKSAVPSEAPPTPRSAAP 378
Cdd:TIGR00601 77 PKTGTGKVAPPAATPTSA------PTPTPSPP--ASPASGMSAA------PASAVEEKSPSEESATATAPESPSTSVPSS 142
|
..
gi 1767294007 379 SD 380
Cdd:TIGR00601 143 GS 144
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
316-387 |
6.48e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 6.48e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294007 316 AAPSEVPPTPKSAAPsEVPPTPKSAAPSEVPlTPKSAAQSSVPPTPKSAVPsEAPPTPRSAAPSDVPPTPKS 387
Cdd:COG5373 38 AEAAEAASAPAEPEP-EAAAAATAAAPEAAP-APVPEAPAAPPAAAEAPAP-AAAAPPAEAEPAAAPAAASS 106
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
277-386 |
6.75e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 40.23 E-value: 6.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSA----------APSEVPPTPKSAAPSEVPPTPKSAAPSevP 346
Cdd:PRK07994 381 AQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqllaarqqlqRAQGATKAKKSEPAAASRARPVNSALE--R 458
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1767294007 347 LTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPK 386
Cdd:PRK07994 459 LASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPK 498
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
301-413 |
6.98e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 39.85 E-value: 6.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 301 TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSD 380
Cdd:PRK07994 367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAA 446
|
90 100 110
....*....|....*....|....*....|...
gi 1767294007 381 VPPTPksnghiANGSIPGTPSVAQERVEPEPEP 413
Cdd:PRK07994 447 SRARP------VNSALERLASVRPAPSALEKAP 473
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
294-359 |
7.47e-03 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 39.44 E-value: 7.47e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767294007 294 EVPPTPKTAASEKQSVPPTPKSAAPseVPPTPKSAAPSEVPPTPKSAAPSEvplTPKSAAQSSVPP 359
Cdd:PLN02983 139 EALPQPPPPAPVVMMQPPPPHAMPP--ASPPAAQPAPSAPASSPPPTPASP---PPAKAPKSSHPP 199
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
261-386 |
9.01e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 39.77 E-value: 9.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PHA03307 779 EPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPPPARSSESSKSKP 858
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1767294007 341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPK 386
Cdd:PHA03307 859 AAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPR 904
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
277-455 |
9.12e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 39.83 E-value: 9.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 277 PTADEEPAAELEADAGSEVP---PTPKTAASEKQSVPPTPKSAAPSEvPPTPKSAAPseVPPTPKSAAPSEVPLTPKSAA 353
Cdd:PRK07003 362 VTGGGAPGGGVPARVAGAVPapgARAAAAVGASAVPAVTAVTGAAGA-ALAPKAAAA--AAATRAEAPPAAPAPPATADR 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 354 QSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTPSVAQERVEPEPEPVAEEPEPVAEPEPEPEPVAE 433
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASR 518
|
170 180
....*....|....*....|..
gi 1767294007 434 AEPEAEPAVEEEPAEEPEPAAD 455
Cdd:PRK07003 519 EDAPAAAAPPAPEARPPTPAAA 540
|
|
| PRK06975 |
PRK06975 |
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed |
279-349 |
9.68e-03 |
|
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
Pssm-ID: 235899 [Multi-domain] Cd Length: 656 Bit Score: 39.70 E-value: 9.68e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767294007 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAApsevpPTPKSAAPSEVPPTPKSAAPSEVPLTP 349
Cdd:PRK06975 254 GDERIVRAFLTWADAAAQPATAAPAPSRMTDTNDSKSVT-----SQPAAAAAAPAPPPNPPATPPEPPARR 319
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
261-557 |
9.80e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 39.77 E-value: 9.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 261 APPEGKRPRTPNDlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSA 340
Cdd:PHA03307 111 PSSPDPPPPTPPP-ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSP 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSiPGTPSVAQERVEPEPEPVAEEPEP 420
Cdd:PHA03307 190 PAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSES-SGCGWGPENECPLPRPAPITLPTR 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294007 421 VAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPA 500
Cdd:PHA03307 269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294007 501 RRRPQSPSPERQRTSRHADRdITSYDEDSYRAVPPPRMPTATSFSSWSPPDKQSYTP 557
Cdd:PHA03307 349 RSPSPSRPPPPADPSSPRKR-PRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDAT 404
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