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Conserved domains on  [gi|1767294001|ref|NP_001362054|]
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Aggrecan core protein [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK12323 super family cl46901
DNA polymerase III subunit gamma/tau;
309-395 1.12e-07

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK14950:

Pssm-ID: 481241 [Multi-domain]  Cd Length: 585  Bit Score: 55.59  E-value: 1.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 309 VPPTPKSAAPSEVPPTPksaAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPP----TPKSAVPSEAPPTPRSAAPSDV--- 381
Cdd:PRK14950  367 QPAKPTAAAPSPVRPTP---APSTRPKAAAAANIPPKEPVRETATPPPVPPrpvaPPVPHTPESAPKLTRAAIPVDEkpk 443

                          90
                  ....*....|....*..
gi 1767294001 382 ---PPTPKSNGHIANGS 395
Cdd:PRK14950  444 ytpPAPPKEEEKALIAD 460
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 261-459 2.75e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.94  E-value: 2.75e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVP---PTP------------ 325
Cdd:PHA03247  2591 APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPrddPAPgrvsrprrarrl 2670

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  326 --------------KSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEA----PPTPRSAAPSDVPPTPKS 387
Cdd:PHA03247  2671 graaqassppqrprRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAArqasPALPAAPAPPAVPAGPAT 2750

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294001  388 NGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEETPATPRSSVPATPTES 459
Cdd:PHA03247  2751 PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAA 2822
 
Name Accession Description Interval E-value
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 309-395 1.12e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 55.59  E-value: 1.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 309 VPPTPKSAAPSEVPPTPksaAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPP----TPKSAVPSEAPPTPRSAAPSDV--- 381
Cdd:PRK14950  367 QPAKPTAAAPSPVRPTP---APSTRPKAAAAANIPPKEPVRETATPPPVPPrpvaPPVPHTPESAPKLTRAAIPVDEkpk 443

                          90
                  ....*....|....*..
gi 1767294001 382 ---PPTPKSNGHIANGS 395
Cdd:PRK14950  444 ytpPAPPKEEEKALIAD 460
PHA03247 PHA03247
large tegument protein UL36; Provisional
 261-459 2.75e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.94  E-value: 2.75e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVP---PTP------------ 325
Cdd:PHA03247  2591 APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPrddPAPgrvsrprrarrl 2670

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  326 --------------KSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEA----PPTPRSAAPSDVPPTPKS 387
Cdd:PHA03247  2671 graaqassppqrprRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAArqasPALPAAPAPPAVPAGPAT 2750

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294001  388 NGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEETPATPRSSVPATPTES 459
Cdd:PHA03247  2751 PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAA 2822
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 259-382 4.64e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 44.14  E-value: 4.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 259 LQAPPEGKRPRTPNDLDNPTadeePAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPK 338
Cdd:pfam05109 458 LTAPASTGPTVSTADVTSPT----PAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPN 533

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1767294001 339 SAAPSEVPLTPKSAAQSSVP-----------PTPKSAVPSEAPPTPRSAAPSDVP 382
Cdd:pfam05109 534 ATSPTLGKTSPTSAVTTPTPnatsptpavttPTPNATIPTLGKTSPTSAVTTPTP 588
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 262-388 3.82e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 40.52  E-value: 3.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 262 PPEGKRPRTPNDLDnPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPTPKSAA 341
Cdd:NF040712  200 ATVPRLAREPADAR-PEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGP--GAAPAAEPDEATRD 276

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1767294001 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSN 388
Cdd:NF040712  277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
316-387 6.54e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.37  E-value: 6.54e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294001 316 AAPSEVPPTPKSAAPsEVPPTPKSAAPSEVPlTPKSAAQSSVPPTPKSAVPsEAPPTPRSAAPSDVPPTPKS 387
Cdd:COG5373    38 AEAAEAASAPAEPEP-EAAAAATAAAPEAAP-APVPEAPAAPPAAAEAPAP-AAAAPPAEAEPAAAPAAASS 106
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 254-394 6.84e-03

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 40.00  E-value: 6.84e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 254 KQEFELqAPPEGKRPRTPNDLDNPTADEEpAAELEADAGSEVPPTPKTAASE-KQSVPPTPKSAAPSEVPPTPkSAAPSE 332
Cdd:NF033838  352 EAELEL-VKEEAKEPRNEEKIKQAKAKVE-SKKAEATRLEKIKTDRKKAEEEaKRKAAEEDKVKEKPAEQPQP-APAPQP 428

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767294001 333 VPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA------VPSEAPPTPRSAAPsdvPPTPKSNGHIANG 394
Cdd:NF033838  429 EKPAPKPEKPAEQPKAEKPADQQAEEDYARRSeeeynrLTQQQPPKTEKPAQ---PSTPKTGWKQENG 493
 
Name Accession Description Interval E-value
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 309-395 1.12e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 55.59  E-value: 1.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 309 VPPTPKSAAPSEVPPTPksaAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPP----TPKSAVPSEAPPTPRSAAPSDV--- 381
Cdd:PRK14950  367 QPAKPTAAAPSPVRPTP---APSTRPKAAAAANIPPKEPVRETATPPPVPPrpvaPPVPHTPESAPKLTRAAIPVDEkpk 443

                          90
                  ....*....|....*..
gi 1767294001 382 ---PPTPKSNGHIANGS 395
Cdd:PRK14950  444 ytpPAPPKEEEKALIAD 460
PHA03247 PHA03247
large tegument protein UL36; Provisional
 261-459 2.75e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.94  E-value: 2.75e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVP---PTP------------ 325
Cdd:PHA03247  2591 APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPrddPAPgrvsrprrarrl 2670

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  326 --------------KSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEA----PPTPRSAAPSDVPPTPKS 387
Cdd:PHA03247  2671 graaqassppqrprRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAArqasPALPAAPAPPAVPAGPAT 2750

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294001  388 NGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEETPATPRSSVPATPTES 459
Cdd:PHA03247  2751 PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAA 2822
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 257-353 7.80e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 52.97  E-value: 7.80e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  257 FELQAPPEGKRPRTPndlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPT 336
Cdd:PRK12270    33 FADYGPGSTAAPTAA---AAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109

                           90
                   ....*....|....*..
gi 1767294001  337 PKSAAPSEVPLTPKSAA 353
Cdd:PRK12270   110 AAAVEDEVTPLRGAAAA 126
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 296-392 8.75e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 52.50  E-value: 8.75e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 296 PPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSaaqssvppTPKSAVPSEAPPTPRS 375
Cdd:PRK14950  363 VPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVA--------PPVPHTPESAPKLTRA 434

                          90       100
                  ....*....|....*....|..
gi 1767294001 376 AAPSDV-----PPTPKSNGHIA 392
Cdd:PRK14950  435 AIPVDEkpkytPPAPPKEEEKA 456
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 302-387 1.83e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 51.64  E-value: 1.83e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 302 AASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPsevpltpksAAQSSVPPTPKSAVPSEAPPTPRSAAPSDV 381
Cdd:PRK14951  375 PAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPA---------APPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445


                  ....*.
gi 1767294001 382 PPTPKS 387
Cdd:PRK14951  446 ALAPAP 451
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
277-459 2.20e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 51.42  E-value: 2.20e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 277 PTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSA-APSEVPPTP---------KSAAPSEVPPTPKSAAPSEVP 346
Cdd:PRK12323  381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAaAPARRSPAPealaaarqaSARGPGGAPAPAPAPAAAPAA 460

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 347 LTPKSAAQSSVPPTPKSAVPS-EAPPTPRSAAPSDVPP---TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPA 422
Cdd:PRK12323  461 AARPAAAGPRPVAAAAAAAPArAAPAAAPAPADDDPPPweeLPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFET 540

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1767294001 423 ATATPAATGTPKADTAFNFEETPATPRSSVPATPTES 459
Cdd:PRK12323  541 LAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMF 577
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 305-386 2.39e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 51.43  E-value: 2.39e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  305 EKQSVPPT---------PKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRS 375
Cdd:PRK12270    21 DPNSVDPSwreffadygPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP 100

                           90
                   ....*....|.
gi 1767294001  376 AAPSDVPPTPK 386
Cdd:PRK12270   101 AAAAAAAPAAA 111
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 274-375 2.56e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 51.43  E-value: 2.56e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  274 LDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPsevPPTPKSAAPSEVPLTPKSAA 353
Cdd:PRK12270    19 LADPNSVDPSWREFFADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP---AAAAPAAPPKPAAAAAAAAA 95

                           90       100
                   ....*....|....*....|..
gi 1767294001  354 QSSVPPTPKSAVPSEAPPTPRS 375
Cdd:PRK12270    96 PAAPPAAAAAAAPAAAAVEDEV 117
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
280-456 1.08e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 49.10  E-value: 1.08e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 280 DEEPAAELEADAGSEVPPT--PKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLT----PKSAA 353
Cdd:PRK12323  371 GAGPATAAAAPVAQPAPAAaaPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASArgpgGAPAP 450

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 354 QSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTP------------SVAQESAKATPAATPAATATP 421
Cdd:PRK12323  451 APAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPpweelppefaspAPAQPDAAPAGWVAESIPDPA 530

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1767294001 422 AATATPAATGTPKADTAFNFEETPATPRSSVPATP 456
Cdd:PRK12323  531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 258-386 1.16e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 49.30  E-value: 1.16e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 258 ELQAPPEGKRPRTPNDLD-----NPTADEEPAAELEADAGSEVPPTPKTAASEKQsvPPTPKSAAPSEVPPTPKSAAPSE 332
Cdd:PTZ00449  539 ESDEPKEGGKPGETKEGEvgkkpGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEE--PKKPKRPRSAQRPTRPKSPKLPE 616

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1767294001 333 VPPTPKSAAPSEVPLTPKSaaqssvPPTPKSAVPSEAPPTPRSAAPSDVPPTPK 386
Cdd:PTZ00449  617 LLDIPKSPKRPESPKSPKR------PPPPQRPSSPERPEGPKIIKSPKPPKSPK 664
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
260-374 2.01e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 48.23  E-value: 2.01e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 260 QAPPEGKRPRTPNDLDNPtADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPkSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PRK14971  364 QKGDDASGGRGPKQHIKP-VFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQS-ATQPAGTPPTVSVDPPAAVPVNPPS 441

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294001 340 AAPSEVPLTPKSAAQssvpPTPKSAVPSEAPPTPR 374
Cdd:PRK14971  442 TAPQAVRPAQFKEEK----KIPVSKVSSLGPSTLR 472
flhF PRK06995
flagellar biosynthesis protein FlhF;
279-385 2.63e-05

flagellar biosynthesis protein FlhF;


Pssm-ID: 235904 [Multi-domain]  Cd Length: 484  Bit Score: 47.65  E-value: 2.63e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPP--TPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS 356
Cdd:PRK06995   44 ADSDLAALAPPAAAAPAAAQPPPAAAPAAVSRPaaPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERA 123

                          90       100
                  ....*....|....*....|....*....
gi 1767294001 357 VPPTPKSAVPSEAPPTPRSAAPSDVPPTP 385
Cdd:PRK06995  124 AAENAARRLARAAAAAPRPRVPADAAAAV 152
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
173-379 6.11e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 46.77  E-value: 6.11e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 173 EPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVEEAPEAEETAPAEEPlievaveeapaeepvaeeaepea 252
Cdd:PRK07003  368 PGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAE----------------------- 424

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 253 ekqefelqAPPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSE 332
Cdd:PRK07003  425 --------APPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRA 496

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1767294001 333 VPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK07003  497 AAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPA 543
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 313-405 7.99e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 46.25  E-value: 7.99e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 313 PKSAAPSEVPPTPKSAAPsevpptPKSAAPSEVPLTPKSAAQSSVPPTPKS-----AVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPAR------PEAAAPAAAPVAQAAAAPAPAAAPAAAasapaAPPAAAPPAPVAAPAAAAPAAAPA 439

                          90
                  ....*....|....*...
gi 1767294001 388 NGHIANGSIPGTPSVAQE 405
Cdd:PRK14951  440 AAPAAVALAPAPPAQAAP 457
PRK10856 PRK10856
cytoskeleton protein RodZ;
302-385 9.38e-05

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 45.40  E-value: 9.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 302 AASEKQSVPPTPKSAAPSevPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSS--VPPTPKSAVPSEAPPTPRSAAPS 379
Cdd:PRK10856  155 SQNSGQSVPLDTSTTTDP--ATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNavVAPSQANVDTAATPAPAAPATPD 232


                  ....*.
gi 1767294001 380 DVPPTP 385
Cdd:PRK10856  233 GAAPLP 238
PRK10856 PRK10856
cytoskeleton protein RodZ;
284-380 9.80e-05

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 45.40  E-value: 9.80e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 284 AAELEADAGSEVPPTPKTAASEKQ---SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPT 360
Cdd:PRK10856  151 SAELSQNSGQSVPLDTSTTTDPATtpaPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPAT 230

                          90       100
                  ....*....|....*....|
gi 1767294001 361 PKSAVPSEAPPTPRSAAPSD 380
Cdd:PRK10856  231 PDGAAPLPTDQAGVSTPAAD 250
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 279-390 9.93e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 46.13  E-value: 9.93e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVP-PTPKSAAPSEVPPTPKSAAPSEVP---LTPKSAAQ 354
Cdd:PRK07764  390 GAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPaPAPAPAPPSPAGNAPAGGAPSPPPaaaPSAQPAPA 469

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1767294001 355 SSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGH 390
Cdd:PRK07764  470 PAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAG 505
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 260-373 1.10e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 45.86  E-value: 1.10e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 260 QAPPEGKRPRTPndldnPTADEEPAAeleADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKS 339
Cdd:PRK14951  385 EAAAPAAAPVAQ-----AAAAPAPAA---APAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAA 456

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1767294001 340 AAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTP 373
Cdd:PRK14951  457 PETVAIPVRVAPEPAVASAAPAPAAAPAAARLTP 490
PRK11633 PRK11633
cell division protein DedD; Provisional
 277-378 2.52e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 43.45  E-value: 2.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 277 PTADEEPAAELEADAGSEVPPTP-KTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPlTPKSAAQS 355
Cdd:PRK11633   45 PKPGDRDEPDMMPAATQALPTQPpEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKP-KPKPKPQQ 123

                          90       100
                  ....*....|....*....|...
gi 1767294001 356 SVPPTPKSAvPSEAPPTPRSAAP 378
Cdd:PRK11633  124 KVEAPPAPK-PEPKPVVEEKAAP 145
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
261-439 3.25e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.48  E-value: 3.25e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPK----TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPT 336
Cdd:PRK12323  390 AAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPApealAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGP 469

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 337 PKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTP-----KSNGHIANGSIPGTPSVAQESAKATP 411
Cdd:PRK12323  470 RPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPagwvaESIPDPATADPDDAFETLAPAPAAAP 549

                         170       180
                  ....*....|....*....|....*...
gi 1767294001 412 AATPAATATPAATATPAATGTPKADTAF 439
Cdd:PRK12323  550 APRAAAATEPVVAPRPPRASASGLPDMF 577
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 260-401 3.53e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.21  E-value: 3.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 260 QAPPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQ-SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPK 338
Cdd:PRK07764  631 GAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPaAPPPAPAPAAPAAPAGAAPAQPAPAPAATPP 710

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767294001 339 SAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSA-APSDVPPTPKSNGHIANGSIPGTPS 401
Cdd:PRK07764  711 AGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPpDPAGAPAQPPPPPAPAPAAAPAAAP 774
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
291-387 4.34e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 44.00  E-value: 4.34e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 291 AGSEVPPTPKTAASEKqsvPPTPKSAAPsevPPTPKSAAPSevpPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAP 370
Cdd:PRK14971  365 KGDDASGGRGPKQHIK---PVFTQPAAA---PQPSAAAAAS---PSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAV 435

                          90
                  ....*....|....*...
gi 1767294001 371 PT-PRSAAPSDVPPTPKS 387
Cdd:PRK14971  436 PVnPPSTAPQAVRPAQFK 453
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 259-382 4.64e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 44.14  E-value: 4.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 259 LQAPPEGKRPRTPNDLDNPTadeePAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPK 338
Cdd:pfam05109 458 LTAPASTGPTVSTADVTSPT----PAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPN 533

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1767294001 339 SAAPSEVPLTPKSAAQSSVP-----------PTPKSAVPSEAPPTPRSAAPSDVP 382
Cdd:pfam05109 534 ATSPTLGKTSPTSAVTTPTPnatsptpavttPTPNATIPTLGKTSPTSAVTTPTP 588
flhF PRK06995
flagellar biosynthesis protein FlhF;
302-407 5.01e-04

flagellar biosynthesis protein FlhF;


Pssm-ID: 235904 [Multi-domain]  Cd Length: 484  Bit Score: 43.42  E-value: 5.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 302 AASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDV 381
Cdd:PRK06995   44 ADSDLAALAPPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERA 123

                          90       100
                  ....*....|....*....|....*..
gi 1767294001 382 -PPTPKSNGHIANGSIPGTPSVAQESA 407
Cdd:PRK06995  124 aAENAARRLARAAAAAPRPRVPADAAA 150
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
283-385 5.06e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 43.61  E-value: 5.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 283 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTpk 362
Cdd:PRK14971  363 TQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPP-- 440

                          90       100
                  ....*....|....*....|...
gi 1767294001 363 SAVPSEAPPTPrsaAPSDVPPTP 385
Cdd:PRK14971  441 STAPQAVRPAQ---FKEEKKIPV 460
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 283-387 5.16e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 43.70  E-value: 5.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 283 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPK--SAAQSSVPPT 360
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKK 440

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294001 361 PKSAVPSEAPPTP--------RSAAPSDVPPTPKS 387
Cdd:PRK07994  441 SEPAAASRARPVNsalerlasVRPAPSALEKAPAK 475
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 262-387 5.96e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 43.38  E-value: 5.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 262 PPEGKRPRtPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPsEVPPTPKSAA 341
Cdd:PLN03209  390 PPSSSPAS-SKSVDAVAKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTA-PTGVSPSVSS 467

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1767294001 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PLN03209  468 TSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPS 513
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 316-397 5.96e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 43.64  E-value: 5.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 316 AAPSEVPPTPKSAAPSEVPPTPksaAPSEvplTPKSAAQSSVPPT-PKSAVPSEAPPTPRSAAPSdVPPTPKSNGHIANG 394
Cdd:PRK14950  362 PVPAPQPAKPTAAAPSPVRPTP---APST---RPKAAAAANIPPKePVRETATPPPVPPRPVAPP-VPHTPESAPKLTRA 434


                  ...
gi 1767294001 395 SIP 397
Cdd:PRK14950  435 AIP 437
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
312-387 6.02e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 42.70  E-value: 6.02e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294001 312 TPKSAAPSEVPPTPKSAAPSEVPPTPKsaapsevPLTPKSAAQSSVPPTPKSAVPSEAP-PTPRSAAPSDVPPTPKS 387
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPSTK-------VEAPQSKPNATTPPSTKVEAPQQTPnATTPSSTKVETPQSPTT 92
PLN02217 PLN02217
probable pectinesterase/pectinesterase inhibitor
 279-407 6.33e-04

probable pectinesterase/pectinesterase inhibitor


Pssm-ID: 215130 [Multi-domain]  Cd Length: 670  Bit Score: 43.54  E-value: 6.33e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 279 ADEE-----PAAELEADA---GSEVPPTPKTAASEKQSVPPTPK-SAAPSEVPPTPKSAAPSEVPPTpksaapsevplTP 349
Cdd:PLN02217  531 SDEEilkftPAQYIQGDAwipGKGVPYIPGLFAGNPGSTNSTPTgSAASSNTTFSSDSPSTVVAPST-----------SP 599

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1767294001 350 KSAAQSSVPPTPKSAV-PSEAPPTPRSAAPSDVPPTPKSNGHIAngsipGTPSVAQESA 407
Cdd:PLN02217  600 PAGHLGSPPATPSKIVsPSTSPPASHLGSPSTTPSSPESSIKVA-----STETASPESS 653
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 279-370 6.36e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 43.73  E-value: 6.36e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  279 ADEEPAAeleADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPP--TPKSAAPSEVPPTPKSAAPSevpltPKSAAQSS 356
Cdd:PRK12270    34 ADYGPGS---TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPaaAAPAAPPKPAAAAAAAAAPA-----APPAAAAA 105

                           90
                   ....*....|....
gi 1767294001  357 VPPTPKSAVPSEAP 370
Cdd:PRK12270   106 AAPAAAAVEDEVTP 119
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 276-358 9.01e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 42.96  E-value: 9.01e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  276 NPTADEEPAAELEADAGSEVPPTPKTAASEKQ-SVPPTPKSAAPSeVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQ 354
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAaPAPAPPAAAAPA-APPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115


                   ....
gi 1767294001  355 SSVP 358
Cdd:PRK12270   116 EVTP 119
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
276-385 9.23e-04

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 42.42  E-value: 9.23e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 276 NPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPltpksaaQS 355
Cdd:PRK13335   53 NITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTT-------ES 125

                          90       100       110
                  ....*....|....*....|....*....|
gi 1767294001 356 SVPPTPKSAVPSEAPPTPRSAAPSDVPPTP 385
Cdd:PRK13335  126 TTPKTKVTTPPSTNTPQPMQSTKSDTPQSP 155
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 301-408 9.54e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 42.93  E-value: 9.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 301 TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSD 380
Cdd:PRK07994  367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAA 446

                          90       100
                  ....*....|....*....|....*...
gi 1767294001 381 VPPTPKSNGHIANGSIPGTPSVAQESAK 408
Cdd:PRK07994  447 SRARPVNSALERLASVRPAPSALEKAPA 474
PRK10856 PRK10856
cytoskeleton protein RodZ;
270-346 9.59e-04

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 42.32  E-value: 9.59e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294001 270 TPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVP 346
Cdd:PRK10856  171 DPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGVSTP 247
PRK14954 PRK14954
DNA polymerase III subunits gamma and tau; Provisional
 316-389 1.06e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184918 [Multi-domain]  Cd Length: 620  Bit Score: 42.62  E-value: 1.06e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767294001 316 AAPSEVPPTPKSAAPSEVPPTPKSAAPSEvplTPKSAAQSSVPPTPKSA-VPSEAPPTPRSA----APSDVPPTPKSNG 389
Cdd:PRK14954  382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAK---PEAPGARPAELPSPASApTPEQQPPVARSAplppSPQASAPRNVASG 457
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
287-371 1.34e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 42.26  E-value: 1.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 287 LEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVP 366
Cdd:PRK14948  510 LESQSGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPT 589


                  ....*
gi 1767294001 367 SEAPP 371
Cdd:PRK14948  590 KDSSP 594
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 318-402 1.40e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 42.57  E-value: 1.40e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  318 PSEVPPT----------PKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAP-PTPRSAAPSDVPPTPK 386
Cdd:PRK12270    22 PNSVDPSwreffadygpGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPkPAAAAAAAAAPAAPPA 101

                           90
                   ....*....|....*.
gi 1767294001  387 SNGHIANGSIPGTPSV 402
Cdd:PRK12270   102 AAAAAAPAAAAVEDEV 117
PHA03247 PHA03247
large tegument protein UL36; Provisional
 298-387 1.56e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.62  E-value: 1.56e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  298 TPKTAASEKQSVPPTPKSAAP------SEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPP 371
Cdd:PHA03247   374 HPKRASLPTRKRRSARHAATPfargpgGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQ 453

                           90
                   ....*....|....*.
gi 1767294001  372 TPRSAAPSDVPPTPKS 387
Cdd:PHA03247   454 PPAPATEPAPDDPDDA 469
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 260-378 1.62e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 42.16  E-value: 1.62e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 260 QAPPEGKRPRTPndlDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTP--------KSAAPS 331
Cdd:PRK07994  391 VAPPQAPAVPPP---PASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARPVNsalerlasVRPAPS 467

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1767294001 332 EVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPS-EAPPTPRSAAP 378
Cdd:PRK07994  468 ALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKAlEHEKTPELAAK 515
PRK11633 PRK11633
cell division protein DedD; Provisional
 277-372 1.67e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 40.76  E-value: 1.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 277 PTADEEPAAElEADAGSEVPPT--PKTAASEKQSVPPTPKSAAPSEVPPTPKsaapseVPPTPKSAAPSEVPLTPKsaaq 354
Cdd:PRK11633   64 PTQPPEGAAE-AVRAGDAAAPSldPATVAPPNTPVEPEPAPVEPPKPKPVEK------PKPKPKPQQKVEAPPAPK---- 132

                          90
                  ....*....|....*...
gi 1767294001 355 ssvpPTPKSAVPSEAPPT 372
Cdd:PRK11633  133 ----PEPKPVVEEKAAPT 146
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 260-387 1.82e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.08  E-value: 1.82e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001  260 QAPPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASE----KQSVPPTPKSAAPSEVPPTPK------SAA 329
Cdd:PHA03307    99 SPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPgpppAASPPAAGASPAAVASDAASSrqaalpLSS 178

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1767294001  330 PSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PHA03307   179 PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASS 236
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 312-407 2.06e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 41.72  E-value: 2.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 312 TPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAaQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPksnghi 391
Cdd:PRK14950  344 TSYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPA-PSTRPKAAAAANIPPKEPVRETATPPPVPPRP------ 416

                          90
                  ....*....|....*.
gi 1767294001 392 ANGSIPGTPSVAQESA 407
Cdd:PRK14950  417 VAPPVPHTPESAPKLT 432
PRK14954 PRK14954
DNA polymerase III subunits gamma and tau; Provisional
 293-367 2.20e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184918 [Multi-domain]  Cd Length: 620  Bit Score: 41.47  E-value: 2.20e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 293 SEVPPTPKTAASEKQSVPPTPKSAAPSEVPPT--------PKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA 364
Cdd:PRK14954  378 GGVAPSPAGSPDVKKKAPEPDLPQPDRHPGPAkpeapgarPAELPSPASAPTPEQQPPVARSAPLPPSPQASAPRNVASG 457


                  ...
gi 1767294001 365 VPS 367
Cdd:PRK14954  458 KPG 460
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 283-385 2.27e-03

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 41.09  E-value: 2.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 283 PAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAApseVPPTPKSAAPSEVPLTPksaAQSSVPPTPK 362
Cdd:PTZ00436  222 PAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAA---APPAKAAAPPAKAAAPP---AKAAAPPAKA 295

                          90       100
                  ....*....|....*....|....*
gi 1767294001 363 SAVPSE--APPTPRSAAPSDVPPTP 385
Cdd:PTZ00436  296 AAAPAKaaAAPAKAAAAPAKAAAPP 320
PHA02682 PHA02682
ORF080 virion core protein; Provisional
 293-383 2.36e-03

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 41.00  E-value: 2.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 293 SEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSV---PPTPKSAVPSEA 369
Cdd:PHA02682   80 SPLAPSPACAAPAPACPACAPAAPAPAVTCPAPAPACPPATAPTCPPPAVCPAPARPAPACPPSTrqcPPAPPLPTPKPA 159

                          90
                  ....*....|....
gi 1767294001 370 PPTPRSAAPSDVPP 383
Cdd:PHA02682  160 PAAKPIFLHNQLPP 173
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 261-391 2.48e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.51  E-value: 2.48e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 261 APPEGKRPRTPNDLDNPTADEEPAAELEADAGS----------EVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAAP 330
Cdd:PRK07764  599 GPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGaaaapaeasaAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAP 678

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767294001 331 SEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHI 391
Cdd:PRK07764  679 AAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPV 739
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 279-385 2.98e-03

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 40.70  E-value: 2.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 279 ADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAApseVPPTPKSAAPSEVPLTPKSA----AQ 354
Cdd:PTZ00436  239 AAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAA---APPAKAAAAPAKAAAAPAKAaaapAK 315

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1767294001 355 SSVPPTPKSAVPSEA--PPTPRSAAPSDVPPTP 385
Cdd:PTZ00436  316 AAAPPAKAAAPPAKAatPPAKAAAPPAKAAAAP 348
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 307-414 3.12e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 3.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 307 QSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDvPPTPK 386
Cdd:PRK07764  383 RRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSP-PPAAA 461

                          90       100
                  ....*....|....*....|....*...
gi 1767294001 387 SNGHIANGSIPGTPSVAQESAKATPAAT 414
Cdd:PRK07764  462 PSAQPAPAPAAAPEPTAAPAPAPPAAPA 489
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 278-349 3.72e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.82  E-value: 3.72e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767294001 278 TADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPK--SAAPSEVPPTPKSAAPSEVPPTPKSAA-PSE--VPLTP 349
Cdd:PTZ00144  120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAasKPTPPAAAKPPEPAPAAKPPPTPVARAdPREtrVPMSR 196
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 289-407 3.80e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 3.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 289 ADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEvPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPK-SAVPS 367
Cdd:PRK07764  589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPAA-PAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDaSDGGD 667

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1767294001 368 EAPPTPRSAAPSDVPPTPKSNGHIANGSIPGTPSVAQESA 407
Cdd:PRK07764  668 GWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAA 707
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 262-388 3.82e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 40.52  E-value: 3.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 262 PPEGKRPRTPNDLDnPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPTPKSAA 341
Cdd:NF040712  200 ATVPRLAREPADAR-PEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGP--GAAPAAEPDEATRD 276

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1767294001 342 PSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSN 388
Cdd:NF040712  277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
304-388 3.89e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 40.72  E-value: 3.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 304 SEKQSVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSsvPPTPKSAVPSEAPPTPRSAAPsdvPP 383
Cdd:PRK14948  361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKAS--PPIPVPAEPTEPSPTPPANAA---NA 435


                  ....*
gi 1767294001 384 TPKSN 388
Cdd:PRK14948  436 PPSLN 440
PRK14948 PRK14948
DNA polymerase III subunit gamma/tau;
308-396 3.99e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237862 [Multi-domain]  Cd Length: 620  Bit Score: 40.72  E-value: 3.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 308 SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKS 387
Cdd:PRK14948  516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPE 595

                          90
                  ....*....|....*..
gi 1767294001 388 NGHIA--------NGSI 396
Cdd:PRK14948  596 EIDKAaknladffNGEI 612
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 260-407 4.66e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.74  E-value: 4.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 260 QAPPEGKRPRTPNDLDNPTADEEPAAELEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPTPKS 339
Cdd:PRK07764  625 AAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAP--AAPAGAAPAQPA 702

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 340 AAPSEVPLTPKSAAQSSVPPTPKSAvpsEAPPTPRSAAPSDVPPTPKSN--GHIANGSIPGTPSVAQESA 407
Cdd:PRK07764  703 PAPAATPPAGQADDPAAQPPQAAQG---ASAPSPAADDPVPLPPEPDDPpdPAGAPAQPPPPPAPAPAAA 769
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
 283-401 4.68e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 40.43  E-value: 4.68e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 283 PAAELEADAGSEVPPT----PKTAASEKQSVPPT----PKSAAPSEvPPTPKSAAPSEVPPtpkSAAPS------EVPLT 348
Cdd:PRK14959  367 PVESLRPSGGGASAPSgsaaEGPASGGAATIPTPgtqgPQGTAPAA-GMTPSSAAPATPAP---SAAPSprvpwdDAPPA 442

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1767294001 349 PksaAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNGHiANGSIPGTPS 401
Cdd:PRK14959  443 P---PRSGIPPRPAPRMPEASPVPGAPDSVASASDAPPTLGD-PSDTAEHTPS 491
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 257-371 4.69e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 40.37  E-value: 4.69e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 257 FELQAPPEGKRPRTPNDlDNPTADEEPAAELEADAGSEVPPTPKTAAsekqsvPPTPKSAAPSEVPPTPKSAAPSEVPPT 336
Cdd:PHA03264  264 YEPPPAPSGGSPAPPGD-DRPEAKPEPGPVEDGAPGRETGGEGEGPE------PAGRDGAAGGEPKPGPPRPAPDADRPE 336

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1767294001 337 PksaapsevplTPKSAAQSSVPPTPKSAVPSEAPP 371
Cdd:PHA03264  337 G----------WPSLEAITFPPPTPATPAVPRARP 361
PHA02030 PHA02030
hypothetical protein
 287-382 4.82e-03

hypothetical protein


Pssm-ID: 222843 [Multi-domain]  Cd Length: 336  Bit Score: 39.96  E-value: 4.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 287 LEADAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPksAAPSEVPPtpksAAPSeVPLTPKSAAQSSVPPTPKSAVP 366
Cdd:PHA02030  247 LGGGEDLIIKPKSKAAGSNLPAVPNVAADAGSAAAPAVP--AAAAAVAQ----AAPS-VPQVPNVAVLPDVPQVAPVAAP 319

                          90
                  ....*....|....*.
gi 1767294001 367 SeAPPTPRSAAPSDVP 382
Cdd:PHA02030  320 A-APEVPAVPVVPAAP 334
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
291-371 4.88e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 40.00  E-value: 4.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 291 AGSEVPPTPKTAAseKQSVPPT-----PKSAAPSEVPPTPKSAAPSevpPTPKSAAPSEVPL-TPKSaaqssvpPTPKSa 364
Cdd:PRK13042   28 ANATTPSSTKVEA--PQSTPPStkveaPQSKPNATTPPSTKVEAPQ---QTPNATTPSSTKVeTPQS-------PTTKQ- 94


                  ....*..
gi 1767294001 365 VPSEAPP 371
Cdd:PRK13042   95 VPTEINP 101
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 309-382 5.67e-03

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 39.99  E-value: 5.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 309 VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQ--SSVPPTPKSAVPSEAPP------TPRSAAPSD 380
Cdd:PHA03264  254 VPPYFEESKGYEPPPAPSGGSPAPPGDDRPEAKPEPGPVEDGAPGRetGGEGEGPEPAGRDGAAGgepkpgPPRPAPDAD 333


                  ..
gi 1767294001 381 VP 382
Cdd:PHA03264  334 RP 335
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 283-386 6.34e-03

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 40.10  E-value: 6.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 283 PAAELEADAGSEVPpTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAapseVPPTPksAAPSEVPLTPKSAAQSSVPPTPK 362
Cdd:PHA03269   27 PIPELHTSAATQKP-DPAPAPHQAASRAPDPAVAPTSAASRKPDLA----QAPTP--AASEKFDPAPAPHQAASRAPDPA 99

                          90       100
                  ....*....|....*....|....
gi 1767294001 363 SAVPSEAPPTPRSAAPSDVPPTPK 386
Cdd:PHA03269  100 VAPQLAAAPKPDAAEAFTSAAQAH 123
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
316-387 6.54e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.37  E-value: 6.54e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767294001 316 AAPSEVPPTPKSAAPsEVPPTPKSAAPSEVPlTPKSAAQSSVPPTPKSAVPsEAPPTPRSAAPSDVPPTPKS 387
Cdd:COG5373    38 AEAAEAASAPAEPEP-EAAAAATAAAPEAAP-APVPEAPAAPPAAAEAPAP-AAAAPPAEAEPAAAPAAASS 106
PRK10856 PRK10856
cytoskeleton protein RodZ;
270-365 6.68e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 39.62  E-value: 6.68e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 270 TPNDLDNPTADEEPAAELEADAgseVPPTPKTAASEKQSVPPTPKSAA--PSEVPPTPKSAAPSEVPPTPKSAAPSEVPL 347
Cdd:PRK10856  160 QSVPLDTSTTTDPATTPAPAAP---VDTTPTNSQTPAVATAPAPAVDPqqNAVVAPSQANVDTAATPAPAAPATPDGAAP 236

                          90
                  ....*....|....*...
gi 1767294001 348 TPKSAAQSSVPPTPKSAV 365
Cdd:PRK10856  237 LPTDQAGVSTPAADPNAL 254
PspC_subgroup_1 NF033838
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
 254-394 6.84e-03

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.


Pssm-ID: 468201 [Multi-domain]  Cd Length: 684  Bit Score: 40.00  E-value: 6.84e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 254 KQEFELqAPPEGKRPRTPNDLDNPTADEEpAAELEADAGSEVPPTPKTAASE-KQSVPPTPKSAAPSEVPPTPkSAAPSE 332
Cdd:NF033838  352 EAELEL-VKEEAKEPRNEEKIKQAKAKVE-SKKAEATRLEKIKTDRKKAEEEaKRKAAEEDKVKEKPAEQPQP-APAPQP 428

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767294001 333 VPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSA------VPSEAPPTPRSAAPsdvPPTPKSNGHIANG 394
Cdd:NF033838  429 EKPAPKPEKPAEQPKAEKPADQQAEEDYARRSeeeynrLTQQQPPKTEKPAQ---PSTPKTGWKQENG 493
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
301-386 8.28e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 39.23  E-value: 8.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 301 TAASEKQSVPPTPKSAAPSEVPPTPKSAAPSevpPTPKSAAPSEVPL-TPKSAAQSSVPPTPKSAVPsEAPPTPRsaAPS 379
Cdd:PRK13042   24 TTQAANATTPSSTKVEAPQSTPPSTKVEAPQ---SKPNATTPPSTKVeAPQQTPNATTPSSTKVETP-QSPTTKQ--VPT 97


                  ....*..
gi 1767294001 380 DVPPTPK 386
Cdd:PRK13042   98 EINPKFK 104
PRK12373 PRK12373
NADH-quinone oxidoreductase subunit E;
268-380 8.43e-03

NADH-quinone oxidoreductase subunit E;


Pssm-ID: 237082 [Multi-domain]  Cd Length: 400  Bit Score: 39.40  E-value: 8.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767294001 268 PRTPNDLDNPTADEEPAAELEADaGSEVPPTP---KTAASEKQSVPPTPKSAAPsEVPPTPKSAAPSEVPPTPKSAAPSE 344
Cdd:PRK12373  202 GKARYNASKALAEDIGDTVKRID-GTEVPLLApwqGDAAPVPPSEAARPKSADA-ETNAALKTPATAPKAAAKNAKAPEA 279

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1767294001 345 VPLTPKSAAQSSVPPTPKSAVPSEAPP---------TPRSAAPSD 380
Cdd:PRK12373  280 QPVSGTAAAEPAPKEAAKAAAAAAKPAledkprplgIARPGGADD 324
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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