|
Name |
Accession |
Description |
Interval |
E-value |
| Rootletin |
pfam15035 |
Ciliary rootlet component, centrosome cohesion; |
191-426 |
2.91e-36 |
|
Ciliary rootlet component, centrosome cohesion;
Pssm-ID: 464459 [Multi-domain] Cd Length: 190 Bit Score: 136.71 E-value: 2.91e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 191 RQRIDNNVEQQREYSEMMAALQNKVHEYRKHIAELEGRMVGarnrmlddptsnvmifDNYDPGNTYITNHNVELWSPARG 270
Cdd:pfam15035 1 RRKLQAYQEAQQRQAQLVQKLQAKVLQYKKRCSELEQQLLE----------------KTSELEKTELLLRKLTLEPRLQR 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 271 KREtilggggapglttvnvhagagysgsgvagygggvqamvgDPNANYE-MIARLDEERRRSDE-------YRMQWENER 342
Cdd:pfam15035 65 LER---------------------------------------EHSADLEeALIRLEEERQRSESlsqvnslLREQLEQAS 105
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 343 QKSLSLEDENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRKQFSDLKTHTEEDLDKQKAE 422
Cdd:pfam15035 106 RANEALREDLQKLTNDWERAREELEQKESEWRKEEEAFNEYLSSEHSRLLSLWREVVAVRRQFTELKTATERDLSELKTE 185
|
....
gi 1767287505 423 FTRA 426
Cdd:pfam15035 186 FSRT 189
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
663-1591 |
2.97e-34 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 144.81 E-value: 2.97e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 663 EAERNSRRTDDKLR-----ASEAER------VAAEKARKFLE--DELAKLQASfqkSSTDDARKLRDEMDEhTNSIQEEF 729
Cdd:TIGR02168 176 ETERKLERTRENLDrlediLNELERqlksleRQAEKAERYKElkAELRELELA---LLVLRLEELREELEE-LQEELKEA 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 730 KTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYsddirrnIQKDLDDLREKYDRVHTD 809
Cdd:TIGR02168 252 EEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQI-------LRERLANLERQLEELEAQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 810 NEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISD 889
Cdd:TIGR02168 325 LEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIER 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 890 YESQINLLRRHNDELDTTIKGHQGKIThlENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLEN 969
Cdd:TIGR02168 405 LEARLERLEDRRERLQQEIEELLKKLE--EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 970 ELEKLRNENKELVGKEARARDaaNQQLSRANLLNKE-LEDTKQDLKHSTDVNKQLEQDIR-DLKERLANIgkggrISRDS 1047
Cdd:TIGR02168 483 ELAQLQARLDSLERLQENLEG--FSEGVKALLKNQSgLSGILGVLSELISVDEGYEAAIEaALGGRLQAV-----VVENL 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1048 TTGTDGGAFgdrssvadpsRTRGAAGSTVFVPAaediESRGGGEIDiPSSGDVIHGRDGRDGRDAgnrgthTITNTKERI 1127
Cdd:TIGR02168 556 NAAKKAIAF----------LKQNELGRVTFLPL----DSIKGTEIQ-GNDREILKNIEGFLGVAK------DLVKFDPKL 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1128 ERIEKNILDRYhddeLVEHKIREVNDRWKRELERLenekddlerRIRELEDEL----SQIGRGNDKTENDITELKR---K 1200
Cdd:TIGR02168 615 RKALSYLLGGV----LVVDDLDNALELAKKLRPGY---------RIVTLDGDLvrpgGVITGGSAKTNSSILERRReieE 681
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1201 HAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLY 1280
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKA-LAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1281 GQNQKIKDEwddfRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHL 1360
Cdd:TIGR02168 761 AEIEELEER----LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAAT 836
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1361 EDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDA 1440
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRE 916
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1441 LKELKNSLSHAKTEKERLQNafrektkqadhlnqlasQFDTKLTKLRNELQDTNDklitsdternalrnELQKLSQELKF 1520
Cdd:TIGR02168 917 LEELREKLAQLELRLEGLEV-----------------RIDNLQERLSEEYSLTLE--------------EAEALENKIED 965
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 1521 GNEQIQRKSDEYQTTIDDLAhshRVSedsrLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSE 1591
Cdd:TIGR02168 966 DEEEARRRLKRLENKIKELG---PVN----LAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDRE 1029
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1235-2133 |
5.54e-29 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 127.48 E-value: 5.54e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1235 ENLKSVED---DLRDKLNNLEKQlADSLNRENELEREKRDYDekINSLYGQNQKIKDEWDDFRNDADKEIQKWKTdaytV 1311
Cdd:TIGR02168 186 ENLDRLEDilnELERQLKSLERQ-AEKAERYKELKAELRELE--LALLVLRLEELREELEELQEELKEAEEELEE----L 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1312 RSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNR------- 1384
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKldelaee 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1385 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQnafRE 1464
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE---DR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1465 KTKQADHLNQLASQFDtkltklRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHShr 1544
Cdd:TIGR02168 416 RERLQQEIEELLKKLE------EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL-- 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1545 vseDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQ---DYIKADSE---------RDILSDALRRFQSSANRVINF 1612
Cdd:TIGR02168 488 ---QARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGvlsELISVDEGyeaaieaalGGRLQAVVVENLNAAKKAIAF 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1613 HTFVDGGAGYV---DGVPGGTSVIGGGPSAQRS-GAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSD-VAYPRS 1687
Cdd:TIGR02168 565 LKQNELGRVTFlplDSIKGTEIQGNDREILKNIeGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELaKKLRPG 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1688 VPFPpSADFSSGRPGAASAGGRvinnlDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETH 1767
Cdd:TIGR02168 645 YRIV-TLDGDLVRPGGVITGGS-----AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLR 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1768 TTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQL 1847
Cdd:TIGR02168 719 KELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEEL 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1848 KNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDM 1927
Cdd:TIGR02168 799 KALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL 878
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1928 KDDTDKLRRDLTKAESVENELRKTIDiqsKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRdykqrvhdv 2007
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELR---ELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS--------- 946
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2008 nnrvSELQRQLQDANTEKNRVEDRFLSVEKVVntmrtteTDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNssql 2087
Cdd:TIGR02168 947 ----EEYSLTLEEAEALENKIEDDEEEARRRL-------KRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKED---- 1011
|
890 900 910 920
....*....|....*....|....*....|....*....|....*..
gi 1767287505 2088 sdgwkkekitLLKKIELLENEKRRTDAAIRETALQR-EAIEKSLNAM 2133
Cdd:TIGR02168 1012 ----------LTEAKETLEEAIEEIDREARERFKDTfDQVNENFQRV 1048
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1172-2112 |
2.85e-25 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 115.17 E-value: 2.85e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1172 RIRELEDELSQIGRG----NDKTENDITELKRKHAAEIDKLKSDIS--ALHDKHLSDLDDEKEQYGKAVENLKSVEDDLR 1245
Cdd:TIGR02169 118 RLSEIHDFLAAAGIYpegyNVVLQGDVTDFISMSPVERRKIIDEIAgvAEFDRKKEKALEELEEVEENIERLDLIIDEKR 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1246 DKLNNLEKQLADSLnRENELEREKRDYDEKINSlygqnqkikdewddfrndadKEIQKWKTDAYTVRSEAKALETTNTAL 1325
Cdd:TIGR02169 198 QQLERLRREREKAE-RYQALLKEKREYEGYELL--------------------KEKEALERQKEAIERQLASLEEELEKL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1326 KAQLQAANDRIDHLTKTVNDHTSKVRDLTS--------QVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQS 1397
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLGEeeqlrvkeKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1398 DANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLAS 1477
Cdd:TIGR02169 337 EIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1478 QFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDEYQttiddlahshrvsedsrlnalQEL 1557
Cdd:TIGR02169 417 RLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKL----EQLAADLSKYE---------------------QEL 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1558 EARKYEINDLtsrldstEQRLATLQQDYIKADSERDILSDALRRFqSSANRVINfhtfvdggagyvDGVPG--GTSVIGG 1635
Cdd:TIGR02169 472 YDLKEEYDRV-------EKELSKLQRELAEAEAQARASEERVRGG-RAVEEVLK------------ASIQGvhGTVAQLG 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1636 GPSAQRSGAYDPSSGGVIG----SGISGGPGGSDFGREIEIGRGD--------SDQSDVAYPRS----------VPFPPS 1693
Cdd:TIGR02169 532 SVGERYATAIEVAAGNRLNnvvvEDDAVAKEAIELLKRRKAGRATflplnkmrDERRDLSILSEdgvigfavdlVEFDPK 611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1694 ---------------ADFSSGRPgaaSAGGRVINNLDG---TTTVNMNGGFDI--------ANLEGTLQSLLNKIEKLEM 1747
Cdd:TIGR02169 612 yepafkyvfgdtlvvEDIEAARR---LMGKYRMVTLEGelfEKSGAMTGGSRAprggilfsRSEPAELQRLRERLEGLKR 688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1748 ERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALkqrdEERRQMKSKmV 1827
Cdd:TIGR02169 689 ELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEI----ENVKSELKE-L 763
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1828 AAELQArgKEAQLRHLNEQLKNLRTDLdnAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILT 1907
Cdd:TIGR02169 764 EARIEE--LEEDLHKLEEALNDLEARL--SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQ 839
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1908 EKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKtidiqsktshEYQLLKDQLLNTQNELNGANNRKQQLE 1987
Cdd:TIGR02169 840 EQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLES----------RLGDLKKERDELEAQLRELERKIEELE 909
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1988 NELLNVRSEVRDYKQRVHDVNNRVSELQrqlqDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQqLETAKNEkrvATKEL 2067
Cdd:TIGR02169 910 AQIEKKRKRLSELKAKLEALEEELSEIE----DPKGEDEEIPEEELSLEDVQAELQRVEEEIRA-LEPVNML---AIQEY 981
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*
gi 1767287505 2068 EDLKRRLAQLENERrnssqlsDGWKKEKITLLKKIELLENEKRRT 2112
Cdd:TIGR02169 982 EEVLKRLDELKEKR-------AKLEEERKAILERIEEYEKKKREV 1019
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
644-1424 |
3.79e-24 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 111.70 E-value: 3.79e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 644 DKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKfLEDELAKLQASFQKSSTDDARKLRDEMDEHTN 723
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQA-LLKEKREYEGYELLKEKEALERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 724 SIQEE---FKTRIDELNRRVENLLRENNRLKSEVNPLKdkyrdlENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLR 800
Cdd:TIGR02169 248 SLEEElekLTEEISELEKRLEEIEQLLEELNKKIKDLG------EEEQLRVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 801 EKYDRVHTDNEKILGELEHAQKAahLAEQQLKEIKIQrDDYQKQKDEharhlfdiRHKLETEIkgrQDLEKNGARNNDEL 880
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELERE--IEEERKRRDKLT-EEYAELKEE--------LEDLRAEL---EEVDKEFAETRDEL 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 881 DKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKE-------KQDILNQKLKL 953
Cdd:TIGR02169 388 KDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEikkqewkLEQLAADLSKY 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 954 DGDVQALKETIRKLENELEKLRnenKELVGKEARARDAANQQLSRA---NLLNKELEDT--------KQDLKHSTDV--- 1019
Cdd:TIGR02169 468 EQELYDLKEEYDRVEKELSKLQ---RELAEAEAQARASEERVRGGRaveEVLKASIQGVhgtvaqlgSVGERYATAIeva 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1020 ------NKQLEQD------IRDLKERlanigKGGRIS-----------RDSTTGTDGGAFGDRSSVADPSRTRGAA---- 1072
Cdd:TIGR02169 545 agnrlnNVVVEDDavakeaIELLKRR-----KAGRATflplnkmrderRDLSILSEDGVIGFAVDLVEFDPKYEPAfkyv 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1073 -GSTVFVpaaEDIES--RGGGEI-------DIPSSGDVIHGrdgrdGRDAGNRGTHTITNTKERIERieknildryhdde 1142
Cdd:TIGR02169 620 fGDTLVV---EDIEAarRLMGKYrmvtlegELFEKSGAMTG-----GSRAPRGGILFSRSEPAELQR------------- 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1143 lVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAA---EIDKLKSDISALHDKh 1219
Cdd:TIGR02169 679 -LRERLEGL----KRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKlkeRLEELEEDLSSLEQE- 752
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1220 LSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSlnRENELEREKRDYDEKINslygqnqkikdEWDDFRNDADK 1299
Cdd:TIGR02169 753 IENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHS--RIPEIQAELSKLEEEVS-----------RIEARLREIEQ 819
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1300 EIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLE 1379
Cdd:TIGR02169 820 KLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLR 899
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1767287505 1380 STQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNME 1424
Cdd:TIGR02169 900 ELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE 944
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1156-2040 |
4.03e-24 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 111.69 E-value: 4.03e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1156 KRELE-RLENEKDDLERrireLEDELSQIGRGNDKTEnditeLKRKHAAEIDKLKSDISALHdkhLSDLDDEKEQYGKAV 1234
Cdd:TIGR02168 174 RKETErKLERTRENLDR----LEDILNELERQLKSLE-----RQAEKAERYKELKAELRELE---LALLVLRLEELREEL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1235 ENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINS----LYGQNQKIKD------EWDDFRNDADKEIQKW 1304
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEElqkeLYALANEISRleqqkqILRERLANLERQLEEL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1305 KTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNR 1384
Cdd:TIGR02168 322 EAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1385 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMEtdLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFRE 1464
Cdd:TIGR02168 402 IERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAE--LEELEEELEELQEELERLEEALEELREELEEAEQALDA 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1465 KTKQadhLNQLASQFDTkLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNeqiqrksdEYQTTID-DLAhsh 1543
Cdd:TIGR02168 480 AERE---LAQLQARLDS-LERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDE--------GYEAAIEaALG--- 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1544 rvsedSRLNAL--QELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINFHTFVDGGag 1621
Cdd:TIGR02168 545 -----GRLQAVvvENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKA-- 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1622 yVDGVPGGTSVIGGGPSAQR-SGAYDPSsggvigsgisggpggsdfgreieiGRGDSDQSDVAYPRSVPFPPSADFSSGR 1700
Cdd:TIGR02168 618 -LSYLLGGVLVVDDLDNALElAKKLRPG------------------------YRIVTLDGDLVRPGGVITGGSAKTNSSI 672
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1701 PGAASAGGRVINNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNI 1780
Cdd:TIGR02168 673 LERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQL 752
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1781 EDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTD 1860
Cdd:TIGR02168 753 SKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERR 832
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1861 I----RSLRDKEEQWD----------SSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQD 1926
Cdd:TIGR02168 833 IaateRRLEDLEEQIEelsedieslaAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSE 912
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1927 MKDDTDKLRRDLTKAESVENELRKTID-IQSKTSHEYQLLKDQLLNTQN----ELNGANNRKQQLENEL-------LNVR 1994
Cdd:TIGR02168 913 LRRELEELREKLAQLELRLEGLEVRIDnLQERLSEEYSLTLEEAEALENkiedDEEEARRRLKRLENKIkelgpvnLAAI 992
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1995 SEVRDYKQRVHDVNNRVSELQR---QLQDANTEKNR-VEDRFLSVEKVVN 2040
Cdd:TIGR02168 993 EEYEELKERYDFLTAQKEDLTEakeTLEEAIEEIDReARERFKDTFDQVN 1042
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
522-1519 |
4.77e-24 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 111.30 E-value: 4.77e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 522 ERNIELESRGDDSQRKIAELE---AELRRNREKLNEAQGALKKLHEMaQDSEKNVDGTVSIKRTRSLSpgktplppsEAL 598
Cdd:TIGR02168 172 ERRKETERKLERTRENLDRLEdilNELERQLKSLERQAEKAERYKEL-KAELRELELALLVLRLEELR---------EEL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 599 RAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRAS 678
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEEL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 679 EAERVAAEKARKFLEDELAKLQASFQKSSTDDARkLRDEMDEhTNSIQEEFKTRIDELNRRVENllrennrlksevnpLK 758
Cdd:TIGR02168 322 EAQLEELESKLDELAEELAELEEKLEELKEELES-LEAELEE-LEAELEELESRLEELEEQLET--------------LR 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 759 DKYRDLENEYNSTQRRIEEKETQirysddirrniqkdLDDLREKYDRVHTDNEKILGELEHAQKAAHlaEQQLKEIKIQR 838
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERLEAR--------------LERLEDRRERLQQEIEELLKKLEEAELKEL--QAELEELEEEL 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 839 DDYQKQKDEHARHLFDIRhkleteikgrqdlekngarnnDELDKLRQtisdyesqinllrrhndeldttikghqgKITHL 918
Cdd:TIGR02168 450 EELQEELERLEEALEELR---------------------EELEEAEQ----------------------------ALDAA 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 919 ENELHSRSGEIEKLNDLNQRLQKEKQDI---LNQKLKLDGDVQALKETIrKLENELEKlrnenkelvGKEARARDAANqq 995
Cdd:TIGR02168 481 ERELAQLQARLDSLERLQENLEGFSEGVkalLKNQSGLSGILGVLSELI-SVDEGYEA---------AIEAALGGRLQ-- 548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 996 lsraNLLNKELEDTKQDLKHstdvnkqleqdirdLKErlANIGKGGRISRDSTTGTDggafgdrssvADPSRTRGAAGST 1075
Cdd:TIGR02168 549 ----AVVVENLNAAKKAIAF--------------LKQ--NELGRVTFLPLDSIKGTE----------IQGNDREILKNIE 598
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1076 VFVPAAEDIESrgggeidipssgdvihgrdgrdgrdagnrgthtitnTKERIERIEKNILDRYhddeLVEHKIREVNDRW 1155
Cdd:TIGR02168 599 GFLGVAKDLVK------------------------------------FDPKLRKALSYLLGGV----LVVDDLDNALELA 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1156 KRELERLenekddlerRIRELEDEL----SQIGRGNDKTENDITELKR---KHAAEIDKLKSDISALHDKhLSDLDDEKE 1228
Cdd:TIGR02168 639 KKLRPGY---------RIVTLDGDLvrpgGVITGGSAKTNSSILERRReieELEEKIEELEEKIAELEKA-LAELRKELE 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1229 QYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEwddfRNDADKEIQKWKTDA 1308
Cdd:TIGR02168 709 ELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEER----LEEAEEELAEAEAEI 784
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1309 YTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSL 1388
Cdd:TIGR02168 785 EELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEEL 864
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1389 EDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNafrektkq 1468
Cdd:TIGR02168 865 EELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEV-------- 936
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1469 adhlnqlasQFDTKLTKLRNELQDTNDKLITS----DTERNALRNELQKLSQELK 1519
Cdd:TIGR02168 937 ---------RIDNLQERLSEEYSLTLEEAEALenkiEDDEEEARRRLKRLENKIK 982
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
712-1534 |
2.11e-22 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 105.92 E-value: 2.11e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 712 RKLRDEMDEHTNSIqEEFKTRIDELNRRVENLLRENNRlKSEVNPLKDKYRDLE-----NEYNSTQRRIEEKETQI---- 782
Cdd:TIGR02169 173 EKALEELEEVEENI-ERLDLIIDEKRQQLERLRREREK-AERYQALLKEKREYEgyellKEKEALERQKEAIERQLasle 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 783 RYSDDIRRNIQKDLDDLREKYDRVHTDNEKI--LGELEHAQKAAHLAEQQLKEIKIQR-----DDYQKQKDEHARHLFDI 855
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEELNKKIkdLGEEEQLRVKEKIGELEAEIASLERsiaekERELEDAEERLAKLEAE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 856 RHKLETEIkgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDL 935
Cdd:TIGR02169 331 IDKLLAEI---EELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 936 NQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARdaanQQLSRAnllNKELEDTKQDLKH 1015
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLA----ADLSKY---EQELYDLKEEYDR 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1016 STDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTR-----------GAAGSTVFVP----A 1080
Cdd:TIGR02169 481 VEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGeryataievaaGNRLNNVVVEddavA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1081 AEDIE----SRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKER---------------IERIE--KNILDRYH 1139
Cdd:TIGR02169 561 KEAIEllkrRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPkyepafkyvfgdtlvVEDIEaaRRLMGKYR 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1140 ----DDELVE---------HKIREVNDRWKRELERLEnekdDLERRIRELEDELSQIGRGNDKTENDITELKRKhaaeID 1206
Cdd:TIGR02169 641 mvtlEGELFEksgamtggsRAPRGGILFSRSEPAELQ----RLRERLEGLKRELSSLQSELRRIENRLDELSQE----LS 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1207 KLKSDISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYgqnqki 1286
Cdd:TIGR02169 713 DASRKIGEI-EKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLE------ 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1287 kdewddfRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAD 1366
Cdd:TIGR02169 786 -------ARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEN 858
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1367 TKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDankwRGELDAALREndiLKSNNTNMETDLTRLKNRLKSAEDALKELKN 1446
Cdd:TIGR02169 859 LNGKKEELEEELEELEAALRDLESRLGDLKKE----RDELEAQLRE---LERKIEELEAQIEKKRKRLSELKAKLEALEE 931
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1447 SLSHAKTEKERLQnafrEKTKQADHLNQLASQFDTKLTKLRnELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQ 1526
Cdd:TIGR02169 932 ELSEIEDPKGEDE----EIPEEELSLEDVQAELQRVEEEIR-ALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAIL 1006
|
....*...
gi 1767287505 1527 RKSDEYQT 1534
Cdd:TIGR02169 1007 ERIEEYEK 1014
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
606-1396 |
2.21e-20 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 99.37 E-value: 2.21e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 606 RNKDNDIQQLERKLKiaESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRAseaervAA 685
Cdd:TIGR02169 207 REKAERYQALLKEKR--EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEE------LN 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 686 EKARKFLEDELAKLQA-----SFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDK 760
Cdd:TIGR02169 279 KKIKDLGEEEQLRVKEkigelEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 761 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDD 840
Cdd:TIGR02169 359 YAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 841 YQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLEN 920
Cdd:TIGR02169 439 LEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKA 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 921 ELHSRSGEIEKLNDLNQRLQKEKQDILNQKLK---LDGDVQAlKETIRKLENE---------LEKLRNENKEL-VGKEAR 987
Cdd:TIGR02169 519 SIQGVHGTVAQLGSVGERYATAIEVAAGNRLNnvvVEDDAVA-KEAIELLKRRkagratflpLNKMRDERRDLsILSEDG 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 988 ARD-------------AANQQLSRANLLNKELEDTKQDLKHSTDVNkqLEQDIRDlkerlanigKGGRISrdsttgtdGG 1054
Cdd:TIGR02169 598 VIGfavdlvefdpkyePAFKYVFGDTLVVEDIEAARRLMGKYRMVT--LEGELFE---------KSGAMT--------GG 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1055 AFGDRSSVADPSRTRGAAGSTvfvpaAEDIESRGGGEIDIPSSGDVIHGR--DGRDGRDAGNRGTHTITNTKERIERIEK 1132
Cdd:TIGR02169 659 SRAPRGGILFSRSEPAELQRL-----RERLEGLKRELSSLQSELRRIENRldELSQELSDASRKIGEIEKEIEQLEQEEE 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1133 NILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTE-NDITELKRKHAAEIDKLKSD 1211
Cdd:TIGR02169 734 KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAELSKLEEEVSRIEAR 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1212 ISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWD 1291
Cdd:TIGR02169 814 LREI-EQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERD 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1292 DFRND---ADKEIQKWKTDAYTVRSEAKalettntALKAQLQAANDRIDHLTKTVNDHTSKV------RDLTSQVRHLED 1362
Cdd:TIGR02169 893 ELEAQlreLERKIEELEAQIEKKRKRLS-------ELKAKLEALEEELSEIEDPKGEDEEIPeeelslEDVQAELQRVEE 965
|
810 820 830
....*....|....*....|....*....|....
gi 1767287505 1363 ELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQ 1396
Cdd:TIGR02169 966 EIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLE 999
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
606-1033 |
8.87e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.97 E-value: 8.87e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 606 RNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAA 685
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQL 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 686 EKARKFLEDELAKLQAsfQKSSTDDAR-KLRDEMDEHTNSIQEEfKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDL 764
Cdd:TIGR02168 746 EERIAQLSKELTELEA--EIEELEERLeEAEEELAEAEAEIEEL-EAQIEQLKEELKALREALDELRAELTLLNEEAANL 822
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 765 ENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLddlrekydrvhtdnEKILGELEHAQkaahlaeQQLKEIKIQRDDYQKQ 844
Cdd:TIGR02168 823 RERLESLERRIAATERRLEDLEEQIEELSEDI--------------ESLAAEIEELE-------ELIEELESELEALLNE 881
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 845 KDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLrrhndeldttikghQGKITHLenelhs 924
Cdd:TIGR02168 882 RASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGL--------------EVRIDNL------ 941
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 925 rsgeIEKLNDLNQRLQkekQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKElvgkearARDAANQQLSRANLLNK 1004
Cdd:TIGR02168 942 ----QERLSEEYSLTL---EEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLA-------AIEEYEELKERYDFLTA 1007
|
410 420
....*....|....*....|....*....
gi 1767287505 1005 ELEDTKQDLkhstdvnKQLEQDIRDLKER 1033
Cdd:TIGR02168 1008 QKEDLTEAK-------ETLEEAIEEIDRE 1029
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
508-984 |
3.59e-18 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 91.62 E-value: 3.59e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 508 ELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTvsikrtrslsp 587
Cdd:TIGR04523 211 QKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQN----------- 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 588 gktplppsealravRNTFRNKDNDIQQLERKLKIAESQVKEFLNK-----FENADEARRRLDKQFA-------DAKREIS 655
Cdd:TIGR04523 280 --------------NKKIKELEKQLNQLKSEISDLNNQKEQDWNKelkseLKNQEKKLEEIQNQISqnnkiisQLNEQIS 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 656 NLQKSVD--EAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARKLRDEMDEHTNSIQEEFktri 733
Cdd:TIGR04523 346 QLKKELTnsESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEK---- 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 734 DELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKI 813
Cdd:TIGR04523 422 ELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 814 LGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEikgrqDLEKNGARNNDELDKLRQTISDYESQ 893
Cdd:TIGR04523 502 NEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD-----DFELKKENLEKEIDEKNKEIEELKQT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 894 INLLRRHNDELDTTIKGHQGKITHLENELHSR-------SGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRK 966
Cdd:TIGR04523 577 QKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKekkisslEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
490
....*....|....*...
gi 1767287505 967 LENELEKLRNENKELVGK 984
Cdd:TIGR04523 657 IRNKWPEIIKKIKESKTK 674
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
598-1374 |
1.02e-17 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 90.08 E-value: 1.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 598 LRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKS-------VDEAERNSRR 670
Cdd:TIGR04523 42 LKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDlskinseIKNDKEQKNK 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 671 TDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSST--DDARKLRDEMDEHTNSIQEEF---KTRIDELN---RRVEN 742
Cdd:TIGR04523 122 LEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNkyNDLKKQKEELENELNLLEKEKlniQKNIDKIKnklLKLEL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 743 LL-------RENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILG 815
Cdd:TIGR04523 202 LLsnlkkkiQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEIS-------NTQTQLNQLKDEQNKIKKQLSEKQK 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 816 ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEharhlfDIRHKLETEIKGRQ----DLEKNGARNNDELDKLRQTISDYE 891
Cdd:TIGR04523 275 ELEQNNKKIKELEKQLNQLKSEISDLNNQKEQ------DWNKELKSELKNQEkkleEIQNQISQNNKIISQLNEQISQLK 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 892 SQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKL----NDLNQRLQKEKQD----------ILNQKLKLDGDV 957
Cdd:TIGR04523 349 KELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLesqiNDLESKIQNQEKLnqqkdeqikkLQQEKELLEKEI 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 958 QALKETIRKLENELEKLRNEN--KELVGKE-ARARDAANQQLS----RANLLNKELEDTKQDLKHSTDVNKQLEQDIRDL 1030
Cdd:TIGR04523 429 ERLKETIIKNNSEIKDLTNQDsvKELIIKNlDNTRESLETQLKvlsrSINKIKQNLEQKQKELKSKEKELKKLNEEKKEL 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1031 KERLANIgkggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpaaediesrgggeidipssgdvihgrdgrdgr 1110
Cdd:TIGR04523 509 EEKVKDL------------------------------------------------------------------------- 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1111 dagnrgthtitntKERIERIEKNIldryhddelvehkirevndrwkrelERLENEKDDLERRIRELEDELSQIGRGNDKt 1190
Cdd:TIGR04523 516 -------------TKKISSLKEKI-------------------------EKLESEKKEKESKISDLEDELNKDDFELKK- 556
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1191 eNDITELKRKHAAEIDKLKSDISALHDKHlSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKR 1270
Cdd:TIGR04523 557 -ENLEKEIDEKNKEIEELKQTQKSLKKKQ-EEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIK 634
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1271 DYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVrseAKALETTNTALKAQLQAANDRIDHLTKT-----VND 1345
Cdd:TIGR04523 635 NIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKI---DDIIELMKDWLKELSLHYKKYITRMIRIkdlpkLEE 711
|
810 820
....*....|....*....|....*....
gi 1767287505 1346 HTSKVRDLTSQVRHLEDELADTKGNLVQK 1374
Cdd:TIGR04523 712 KYKEIEKELKKLDEFSKELENIIKNFNKK 740
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
737-1500 |
1.16e-17 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 90.08 E-value: 1.16e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 737 NRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGE 816
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 817 LEHAQKAAHLAEQQLKEIKiqrddyqKQKDEHARHLFDIRhkleTEIKgrqDLEKNGARNNDELDKLRQTISDYESQINL 896
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLE-------KQKKENKKNIDKFL----TEIK---KKEKELEKLNNKYNDLKKQKEELENELNL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 897 LRRHNDELDTTIKghqgKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRN 976
Cdd:TIGR04523 178 LEKEKLNIQKNID----KIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 977 ENKELVGKEARARD---AANQQLSRANLLNKELEDTKQDLKHS-TDVNKQLEQDI-RDLKERLANIGKggrisrdsttgt 1051
Cdd:TIGR04523 254 QLNQLKDEQNKIKKqlsEKQKELEQNNKKIKELEKQLNQLKSEiSDLNNQKEQDWnKELKSELKNQEK------------ 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1052 dggafgdrssvadpsrtrgaagstvfvpAAEDIESRgggeidipssgdvihgrdgrdgrdagnrgthtITNTKERIERIE 1131
Cdd:TIGR04523 322 ----------------------------KLEEIQNQ--------------------------------ISQNNKIISQLN 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1132 KNILDryhddelvehkirevndrWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKrkhaAEIDKLKSD 1211
Cdd:TIGR04523 342 EQISQ------------------LKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE----SQINDLESK 399
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1212 I------SALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK 1285
Cdd:TIGR04523 400 IqnqeklNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINK 479
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1286 IKDEWDDFRNDADKEIQKWKTdaytvrseakalettntaLKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELA 1365
Cdd:TIGR04523 480 IKQNLEQKQKELKSKEKELKK------------------LNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKIS 541
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1366 DTKGNLVQKEMDLESTQnrlrsLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELK 1445
Cdd:TIGR04523 542 DLEDELNKDDFELKKEN-----LEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLE 616
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1446 NSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITS 1500
Cdd:TIGR04523 617 KELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKES 671
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
789-1603 |
3.50e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.96 E-value: 3.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 789 RRNIQKDLDDLREKYDRVhtdnEKILGELEhaqkaahlaeQQLKEIKIQRD---DYQKQKDEharhLFDIRHKLETeikg 865
Cdd:TIGR02168 174 RKETERKLERTRENLDRL----EDILNELE----------RQLKSLERQAEkaeRYKELKAE----LRELELALLV---- 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 866 rQDLEkngaRNNDELDKLRQTISDYESQINllrrhndELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQD 945
Cdd:TIGR02168 232 -LRLE----ELREELEELQEELKEAEEELE-------ELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 946 ILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQ 1025
Cdd:TIGR02168 300 LEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1026 DIRDLKERLANIgkggrisrdsttgtdggafgdRSSVADPSRTRGAAGSTVfvpaaEDIESRgggeidipssgdvihgRD 1105
Cdd:TIGR02168 380 QLETLRSKVAQL---------------------ELQIASLNNEIERLEARL-----ERLEDR----------------RE 417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1106 GRDGRDAGNRGTHTITNTKERIERIEknildryhDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGR 1185
Cdd:TIGR02168 418 RLQQEIEELLKKLEEAELKELQAELE--------ELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQA 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1186 GNDKTENDITELKRKH--AAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVEN-LKSVEDDLRDKLNNLEKQLADSLnRE 1262
Cdd:TIGR02168 490 RLDSLERLQENLEGFSegVKALLKNQSGLSGILGV-LSELISVDEGYEAAIEAaLGGRLQAVVVENLNAAKKAIAFL-KQ 567
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1263 NELER-----EKRDYDEKINSLYGQNQK-------IKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALE--------TTN 1322
Cdd:TIGR02168 568 NELGRvtflpLDSIKGTEIQGNDREILKniegflgVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALElakklrpgYRI 647
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1323 TALKAQL-----------QAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQ 1391
Cdd:TIGR02168 648 VTLDGDLvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQ 727
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1392 HSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKElknslshAKTEKERLQnafrektKQADH 1471
Cdd:TIGR02168 728 ISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAE-------AEAEIEELE-------AQIEQ 793
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1472 LNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEyqttIDDLAHSHRVSEDSRL 1551
Cdd:TIGR02168 794 LKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED----IESLAAEIEELEELIE 869
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 1552 NALQELEArkyeindLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQ 1603
Cdd:TIGR02168 870 ELESELEA-------LLNERASLEEALALLRSELEELSEELRELESKRSELR 914
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1120-1610 |
7.08e-17 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 87.38 E-value: 7.08e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1120 ITNTKERIERIEKNILDryhddelVEHKIREVNDRWKR---ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITE 1196
Cdd:TIGR04523 119 KNKLEVELNKLEKQKKE-------NKKNIDKFLTEIKKkekELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDK 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1197 LKRKHAAEIDKLkSDISALHDKH------LSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLadsLNRENELEREKR 1270
Cdd:TIGR04523 192 IKNKLLKLELLL-SNLKKKIQKNkslesqISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQL---NQLKDEQNKIKK 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1271 DYDEKINSLYGQNQKIKD---------------------EWDDFRNDADKEIQKWKTDAYT------------------V 1311
Cdd:TIGR04523 268 QLSEKQKELEQNNKKIKElekqlnqlkseisdlnnqkeqDWNKELKSELKNQEKKLEEIQNqisqnnkiisqlneqisqL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1312 RSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQ 1391
Cdd:TIGR04523 348 KKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKE 427
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1392 HSTLQSDANKWRGELDAalrendiLKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADH 1471
Cdd:TIGR04523 428 IERLKETIIKNNSEIKD-------LTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKK 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1472 LNQLASQFDTK---LTKLRNELQDTNDKLITSDTERNA----LRNELQKLSQELKFgnEQIQRKSDEYQTTIDDLAHSHR 1544
Cdd:TIGR04523 501 LNEEKKELEEKvkdLTKKISSLKEKIEKLESEKKEKESkisdLEDELNKDDFELKK--ENLEKEIDEKNKEIEELKQTQK 578
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 1545 VSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVI 1610
Cdd:TIGR04523 579 SLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLK 644
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
512-1274 |
9.81e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.42 E-value: 9.81e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 512 ELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNvdgtvsIKRTRslspgktp 591
Cdd:TIGR02168 243 ELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQ------KQILR-------- 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 592 lppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRT 671
Cdd:TIGR02168 309 ----ERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 672 DDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTdDARKLRDEMDEHTnsiQEEFKTRIDELNRRVENLLRENNRLK 751
Cdd:TIGR02168 385 RSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQ-EIEELLKKLEEAE---LKELQAELEELEEELEELQEELERLE 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 752 SEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKY--------------DRVHTDN------E 811
Cdd:TIGR02168 461 EALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLknqsglsgilgvlsELISVDEgyeaaiE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 812 KILGELEHA-----QKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQT 886
Cdd:TIGR02168 541 AALGGRLQAvvvenLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 887 I-------SDYESQINLLRRHN-----------------------DELDTTIKGHQGKITHLENELHSRSGEIEKLNDLN 936
Cdd:TIGR02168 621 LlggvlvvDDLDNALELAKKLRpgyrivtldgdlvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKAL 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 937 QRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHS 1016
Cdd:TIGR02168 701 AELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1017 TDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTvfvpaAEDIESRgggeidips 1096
Cdd:TIGR02168 781 EAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERR-----LEDLEEQ--------- 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1097 sgdvihgrdgrdgrdagnrgthtITNTKERIERIEKNILDryhddelvehkIREVNDRWKRELERLENEKDDLERRIREL 1176
Cdd:TIGR02168 847 -----------------------IEELSEDIESLAAEIEE-----------LEELIEELESELEALLNERASLEEALALL 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1177 EDELSQIGRGNDKTENDITELKRKHAA----------EIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRD 1246
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEElreklaqlelRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARR 972
|
810 820 830
....*....|....*....|....*....|..
gi 1767287505 1247 KLNNLEKQLAD----SLNRENELEREKRDYDE 1274
Cdd:TIGR02168 973 RLKRLENKIKElgpvNLAAIEEYEELKERYDF 1004
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
319-1038 |
1.17e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.03 E-value: 1.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 319 EMIARLDEERRRSDEYRMQWENERQKSLSLEDENDRLRREFERYANDSKDKE--KTFINRERN--------LAQYLSDEQ 388
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEqqKQILRERLAnlerqleeLEAQLEELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 389 RKMLDLWTELQRVRKQFSDLKTHTEEdLDKQKAEFTRAIRNVNNISR--NAAFSAGAGDglgLYGLEDGGDVNRTTNNYE 466
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELES-LEAELEELEAELEELESRLEelEEQLETLRSK---VAQLELQIASLNNEIERL 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 467 KVFIETIKRMNGTGGAGSASSADLLEELRKIRGGGSSEGDAELHKELMTKYEESIERNIELESRgddsqrkIAELEAELR 546
Cdd:TIGR02168 406 EARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREE-------LEEAEQALD 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 547 RNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLSPGKTPLPpsealravrntfrnkdndiqqlerklkiaeSQV 626
Cdd:TIGR02168 479 AAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVL------------------------------SEL 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 627 KEFLNKFENADEA--RRRLD----KQFADAKREISNLQKSvdEAERN-----SRRTDDKLRASEAERVAAEKARKFLEDE 695
Cdd:TIGR02168 529 ISVDEGYEAAIEAalGGRLQavvvENLNAAKKAIAFLKQN--ELGRVtflplDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 696 LAKLQASFQK----------------SSTDDARKLRDEM-------------------DEHTNSIQEEFKTRIDELNRRV 740
Cdd:TIGR02168 607 LVKFDPKLRKalsyllggvlvvddldNALELAKKLRPGYrivtldgdlvrpggvitggSAKTNSSILERRREIEELEEKI 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 741 ENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHA 820
Cdd:TIGR02168 687 EELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 821 QKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLEteikgrqDLEKNGARNNDELDKLRQTISDYESQINLLRRH 900
Cdd:TIGR02168 767 EERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALD-------ELRAELTLLNEEAANLRERLESLERRIAATERR 839
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 901 NDELDTTIKGHQGKITHLEnelhsrsGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKE 980
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLA-------AEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSE 912
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 981 LVGKEARARDAANQ--------QLSRANLLNK-------ELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIG 1038
Cdd:TIGR02168 913 LRRELEELREKLAQlelrleglEVRIDNLQERlseeyslTLEEAEALENKIEDDEEEARRRLKRLENKIKELG 985
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1727-2217 |
1.37e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 86.91 E-value: 1.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1727 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1806
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1807 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRtdldnahtdiRSLRDKEEQWDSSRFQLETKMRESD 1886
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE----------AELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1887 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLK 1966
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1967 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR--VSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRT 2044
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDD 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2045 TETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRnssqlsdgwkkekITLLKKIELLENEKRrtDAAIRETALQRE 2124
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR-------------GAIGAAVDLVASDLR--EADARYYVLGDT 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2125 AIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQ 2204
Cdd:COG1196 622 LLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA 701
|
490
....*....|...
gi 1767287505 2205 LEDQIAILRDQLD 2217
Cdd:COG1196 702 EEEEERELAEAEE 714
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
685-1271 |
1.39e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 86.53 E-value: 1.39e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 685 AEKARKF--LEDELAKLQASfqksstddARKLRDEmdeHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYR 762
Cdd:COG1196 209 AEKAERYreLKEELKELEAE--------LLLLKLR---ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 763 DLENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQ 842
Cdd:COG1196 278 ELELELEEAQAEEYELLAELA-------RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAE 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 843 KQKDEHARHLFDIRHKLETEIKGRQDLEkngarnnDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENEL 922
Cdd:COG1196 351 EELEEAEAELAEAEEALLEAEAELAEAE-------EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 923 HSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLL 1002
Cdd:COG1196 424 EELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1003 NKELEDTKQDLKHS-----------------------------------TDVNKQLEQDIRDLKER---------LANIG 1038
Cdd:COG1196 504 EGFLEGVKAALLLAglrglagavavligveaayeaaleaalaaalqnivVEDDEVAAAAIEYLKAAkagratflpLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1039 KGGRISRDSTTGTDGGAFGDRSS--VADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRG 1116
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASdlREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1117 THTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTEN---D 1193
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEellE 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1194 ITELKRKHAAEIDKLKSDISALhDKHLSDLDDEKEQYGK----AVENLKSVE---DDLRDKLNNLEKQLADSLNRENELE 1266
Cdd:COG1196 744 EEELLEEEALEELPEPPDLEEL-ERELERLEREIEALGPvnllAIEEYEELEeryDFLSEQREDLEEARETLEEAIEEID 822
|
....*
gi 1767287505 1267 REKRD 1271
Cdd:COG1196 823 RETRE 827
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1158-1601 |
1.68e-16 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 86.23 E-value: 1.68e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1158 ELERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKRKHAAEIDKLKSDISALHdkhlSDLDDEKEQYGKAVENL 1237
Cdd:TIGR04523 55 ELKNLDKNLNKDEEKINNSNNKIKIL----EQQIKDLNDKLKKNKDKINKLNSDLSKIN----SEIKNDKEQKNKLEVEL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1238 KSVEDDLRDK----------LNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWkTD 1307
Cdd:TIGR04523 127 NKLEKQKKENkknidkflteIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLL-SN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1308 AYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRS 1387
Cdd:TIGR04523 206 LKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKE 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1388 LEDQHSTLQSDANKWRGELDAALreNDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTK 1467
Cdd:TIGR04523 286 LEKQLNQLKSEISDLNNQKEQDW--NKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQR 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1468 QADHLNQlasqfdtKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQT---TIDDLAHSHR 1544
Cdd:TIGR04523 364 ELEEKQN-------EIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELlekEIERLKETII 436
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 1545 VSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRR 1601
Cdd:TIGR04523 437 KNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS 493
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
507-1039 |
1.11e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 83.83 E-value: 1.11e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 507 AELHKELMTKYEESIERNIELESRGDD---SQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTvsikrtr 583
Cdd:COG1196 263 AELEAELEELRLELEELELELEEAQAEeyeLLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEEL------- 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 584 slspgktplppSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDE 663
Cdd:COG1196 336 -----------EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 664 AERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARKLRDEmdEHTNSIQEEFKTRIDELNRRVENL 743
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEE--EALLELLAELLEEAALLEAALAEL 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 744 LRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEketqirysdDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQ-- 821
Cdd:COG1196 483 LEELAEAAARLLLLLEAEADYEGFLEGVKAALLL---------AGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIvv 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 822 ---KAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGR----QDLEKNGARNNDELDKLRQTISDY---E 891
Cdd:COG1196 554 eddEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVdlvaSDLREADARYYVLGDTLLGRTLVAarlE 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 892 SQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENEL 971
Cdd:COG1196 634 AALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAE 713
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 972 EKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1039
Cdd:COG1196 714 EERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
728-1362 |
1.39e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 83.45 E-value: 1.39e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 728 EFKTRIDElnRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVH 807
Cdd:COG1196 217 ELKEELKE--LEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 808 TDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTI 887
Cdd:COG1196 295 AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 888 SDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEklndlnqRLQKEKQDILNQKLKLDGDVQALKETIRKL 967
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLE-------RLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 968 ENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGrisrDS 1047
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRG----LA 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1048 TTGTDGGAFGDRSSVADPSRTrGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKERI 1127
Cdd:COG1196 524 GAVAVLIGVEAAYEAALEAAL-AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVD 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1128 ERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRgndktenDITELKRKHAAEIDK 1207
Cdd:COG1196 603 LVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGG-------SLTGGSRRELLAALL 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1208 LKSDIsalhdkhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIK 1287
Cdd:COG1196 676 EAEAE-------LEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL 748
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1288 DEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLtktvndhTSKVRDLTSQVRHLED 1362
Cdd:COG1196 749 EEEALEELPEPPDLEELERELERLEREIEALGPVNLLAIEEYEELEERYDFL-------SEQREDLEEARETLEE 816
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
537-1039 |
2.24e-15 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 82.38 E-value: 2.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 537 KIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTvsIKRTRSLSPGKTPLPPS-----EALRAVRNTFRNKD-- 609
Cdd:TIGR04523 125 ELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDL--KKQKEELENELNLLEKEklniqKNIDKIKNKLLKLEll 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 610 -NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKA 688
Cdd:TIGR04523 203 lSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKK 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 689 RKFLEDELAKLQASFQKsstddarkLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENN----RLKSEVNPLKDKYRDL 764
Cdd:TIGR04523 283 IKELEKQLNQLKSEISD--------LNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNkiisQLNEQISQLKKELTNS 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 765 ENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDdyqkq 844
Cdd:TIGR04523 355 ESENSEKQRELEEKQNEIE-------KLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKE----- 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 845 kdeharhlfdirhKLETEIkgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHS 924
Cdd:TIGR04523 423 -------------LLEKEI---ERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ 486
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 925 RSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKearaRDAANQQLSRANL--- 1001
Cdd:TIGR04523 487 KQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDE----LNKDDFELKKENLeke 562
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1767287505 1002 ---LNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1039
Cdd:TIGR04523 563 ideKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIK 603
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
761-1525 |
7.58e-15 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 80.83 E-value: 7.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 761 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD-LREKYDRVHTDNEKIlgelehaqkaaHLAEQQLKEIKiqrd 839
Cdd:TIGR04523 24 YKNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKnLNKDEEKINNSNNKI-----------KILEQQIKDLN---- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 840 dyqkqkdeharhlfdirHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLE 919
Cdd:TIGR04523 89 -----------------DKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 920 NELhsrsgeiEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEarardaanqqlSRA 999
Cdd:TIGR04523 152 KEL-------EKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKI-----------QKN 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1000 NLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvp 1079
Cdd:TIGR04523 214 KSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT---------------------------------------- 253
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1080 aaediesrgggeidipssgdvihgrdgrdgrdagnrgthTITNTKERIERIEKNILDRYHDDELVEHKIREVNDR---WK 1156
Cdd:TIGR04523 254 ---------------------------------------QLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQlnqLK 294
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1157 RELERLENEKD-----DLERRIRELEDELSQIGRGNDKTENDITELKRkhaaEIDKLKSDISALHDKHLSdLDDEKEQYG 1231
Cdd:TIGR04523 295 SEISDLNNQKEqdwnkELKSELKNQEKKLEEIQNQISQNNKIISQLNE----QISQLKKELTNSESENSE-KQRELEEKQ 369
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1232 KAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIkdewddfrndaDKEIQKWKTDAYTV 1311
Cdd:TIGR04523 370 NEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELL-----------EKEIERLKETIIKN 438
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1312 RSEAKALETTNTALKAQLQAANDRIDHLTKtvndhtsKVRDLTSQVRHLEDELADTKGNLVQKEMDLES-------TQNR 1384
Cdd:TIGR04523 439 NSEIKDLTNQDSVKELIIKNLDNTRESLET-------QLKVLSRSINKIKQNLEQKQKELKSKEKELKKlneekkeLEEK 511
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1385 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTR--LKNRLKSAEDALKELKNSLSHAKTEKERLQNAF 1462
Cdd:TIGR04523 512 VKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKenLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELI 591
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 1463 REKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQI 1525
Cdd:TIGR04523 592 DQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETI 654
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1232-1884 |
7.82e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.14 E-value: 7.82e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1232 KAVENLKSVEDDL---RDKLNNLEKQLaDSLNRENELEREKRDYDEKINSLygQNQKIKDEWDDFRND---ADKEIQKWK 1305
Cdd:COG1196 176 EAERKLEATEENLerlEDILGELERQL-EPLERQAEKAERYRELKEELKEL--EAELLLLKLRELEAEleeLEAELEELE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1306 TDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRL 1385
Cdd:COG1196 253 AELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1386 RSLEDQhstlqsdankwrgeldaalrendilksnntnmetdLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREK 1465
Cdd:COG1196 333 EELEEE-----------------------------------LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1466 TKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKfgneqiqrksdEYQTTIDDLAHSHRV 1545
Cdd:COG1196 378 EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALA-----------ELEEEEEEEEEALEE 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1546 SEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINFHTfvdggagyVDG 1625
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL--------LAG 518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1626 VPGGTSVIGGGPSAQRSGAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPRSVPFPPSADFSSGRPGAAS 1705
Cdd:COG1196 519 LRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIG 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1706 AG-GRVINNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNL 1784
Cdd:COG1196 599 AAvDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAE 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1785 QDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSL 1864
Cdd:COG1196 679 AELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPE 758
|
650 660
....*....|....*....|
gi 1767287505 1865 RDKEEQWDSSRFQLETKMRE 1884
Cdd:COG1196 759 PPDLEELERELERLEREIEA 778
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
892-1609 |
1.27e-14 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 80.55 E-value: 1.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 892 SQINLLRRHNDELDTTIK--GHQGKiTHLENELHSRSGEIEklnDLNQRLQKEKQdiLNQKLKLdgdvqALKETIRKLEN 969
Cdd:pfam15921 49 TQIPIFPKYEVELDSPRKiiAYPGK-EHIERVLEEYSHQVK---DLQRRLNESNE--LHEKQKF-----YLRQSVIDLQT 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 970 ELEKLRNENKELVgkEARARDAANQQLSRANLLNK--ELEDT---KQDLKHstDVNKQLEQDIRDLKERLANIGKGGRIS 1044
Cdd:pfam15921 118 KLQEMQMERDAMA--DIRRRESQSQEDLRNQLQNTvhELEAAkclKEDMLE--DSNTQIEQLRKMMLSHEGVLQEIRSIL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1045 RDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGrdgrdgrDAGNRGTHTITNTK 1124
Cdd:pfam15921 194 VDFEEASGKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKS-------ESQNKIELLLQQHQ 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1125 ERIERI----EKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIgrgndktENDITELKRK 1200
Cdd:pfam15921 267 DRIEQLisehEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQL-------RSELREAKRM 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1201 HAAEIDKLKSDIsALHDKHLSDLDDEKEQYGKAVENLksveDDlrdklnNLEKQLADSLNRENELEREKRdydekinsly 1280
Cdd:pfam15921 340 YEDKIEELEKQL-VLANSELTEARTERDQFSQESGNL----DD------QLQKLLADLHKREKELSLEKE---------- 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1281 gQNQKIkdeWD-DFRNDADKEIQKWKTDAYTVrsEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRH 1359
Cdd:pfam15921 399 -QNKRL---WDrDTGNSITIDHLRRELDDRNM--EVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLES 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1360 LEDELADTKGNLVQKEMDLESTQnrlRSLEDQHSTLQ----------SDANKWRGELDAALRENDILKSNN---TNMETD 1426
Cdd:pfam15921 473 TKEMLRKVVEELTAKKMTLESSE---RTVSDLTASLQekeraieatnAEITKLRSRVDLKLQELQHLKNEGdhlRNVQTE 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1427 LTRLKNRLKSAEDALKELKNSL--------SHAKT------EKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQD 1492
Cdd:pfam15921 550 CEALKLQMAEKDKVIEILRQQIenmtqlvgQHGRTagamqvEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSD 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1493 ---TNDKLITSDTER------------------NALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSE---D 1548
Cdd:pfam15921 630 lelEKVKLVNAGSERlravkdikqerdqllnevKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQselE 709
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 1549 SRLNALQELE------------------ARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRV 1609
Cdd:pfam15921 710 QTRNTLKSMEgsdghamkvamgmqkqitAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1727-2217 |
1.46e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.98 E-value: 1.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1727 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1806
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLE 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1807 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESD 1886
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1887 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKtshEYQLLK 1966
Cdd:COG1196 400 AQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLE---EAALLE 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1967 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR--------------------VSELQRQLQDANTEKN 2026
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglagavavligveaayeaalEAALAAALQNIVVEDD 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2027 RVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLE 2106
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2107 NEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCA--QLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEK 2184
Cdd:COG1196 637 RRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLeaEAELEELAERLAEEELELEEALLAEEEEERELAEAEEER 716
|
490 500 510
....*....|....*....|....*....|...
gi 1767287505 2185 GQIEKVIENRERTHRNRIKQLEDQIAILRDQLD 2217
Cdd:COG1196 717 LEEELEEEALEEQLEAEREELLEELLEEEELLE 749
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
516-1039 |
1.54e-14 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 80.11 E-value: 1.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 516 KYEESIERNI-ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKnvdgtvSIKRTRSLspgktplpp 594
Cdd:PRK03918 186 KRTENIEELIkEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEE------LEKELESL--------- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 595 SEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEfLNKFENADEARRRLDK---QFADAKREISNLQKSVDEAERNSRRT 671
Cdd:PRK03918 251 EGSKRKLEEKIRELEERIEELKKEIEELEEKVKE-LKELKEKAEEYIKLSEfyeEYLDELREIEKRLSRLEEEINGIEER 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 672 DDKLRASEAERVAAEKARKFLEDELAKLQASFQKssTDDARKLRDEMDEH----TNSIQEEFKTRIDELNRRVENLLREN 747
Cdd:PRK03918 330 IKELEEKEERLEELKKKLKELEKRLEELEERHEL--YEEAKAKKEELERLkkrlTGLTPEKLEKELEELEKAKEEIEEEI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 748 NRLKSEVNPLKDKYRDLE---NEYNSTQRRI----------EEKETQIRYSDDIRR--NIQKDLDDLREKYDRVHTDNEK 812
Cdd:PRK03918 408 SKITARIGELKKEIKELKkaiEELKKAKGKCpvcgrelteeHRKELLEEYTAELKRieKELKEIEEKERKLRKELRELEK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 813 ILGELEHAQKAAHLAEqQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQdlekngARNNDELDKLRQTISDYES 892
Cdd:PRK03918 488 VLKKESELIKLKELAE-QLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEI------KSLKKELEKLEELKKKLAE 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 893 QINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRL---QKEKQDILNQKLKLDGDVQALKETIRKLEN 969
Cdd:PRK03918 561 LEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELkdaEKELEREEKELKKLEEELDKAFEELAETEK 640
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 970 ELEKLRNENKELVGK--EARARDAANQQLSranlLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1039
Cdd:PRK03918 641 RLEELRKELEELEKKysEEEYEELREEYLE----LSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1727-2210 |
1.78e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.98 E-value: 1.78e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1727 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1806
Cdd:COG1196 261 ELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELE 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1807 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESD 1886
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1887 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKtshEYQLLK 1966
Cdd:COG1196 421 EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAA---RLLLLL 497
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1967 DQLLNTQNELNGANNRKQQLEN--------ELLNVRSEVRDY------KQRVHDVNNRVSELQRQLQDANTEK------- 2025
Cdd:COG1196 498 EAEADYEGFLEGVKAALLLAGLrglagavaVLIGVEAAYEAAleaalaAALQNIVVEDDEVAAAAIEYLKAAKagratfl 577
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2026 --NRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKR-----------VATKELEDLKRRLAQLENERRNSSQLSDG-- 2090
Cdd:COG1196 578 plDKIRARAALAAALARGAIGAAVDLVASDLREADARYyvlgdtllgrtLVAARLEAALRRAVTLAGRLREVTLEGEGgs 657
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2091 WKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQR 2170
Cdd:COG1196 658 AGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREEL 737
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 1767287505 2171 EEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIA 2210
Cdd:COG1196 738 LEELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1774-2111 |
6.49e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 78.17 E-value: 6.49e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1774 ETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRqmKSKMVAAeLQARGKEAQLRHLNEQLKNLRTD 1853
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRE--LELALLV-LRLEELREELEELQEELKEAEEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1854 LDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDK 1933
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1934 LRRDLTKAESVENELRKtidiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSE 2013
Cdd:TIGR02168 335 LAEELAELEEKLEELKE----------ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIER 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2014 LQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTEtdLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKK 2093
Cdd:TIGR02168 405 LEARLERLEDRRERLQQEIEELLKKLEEAELKE--LQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
330
....*....|....*...
gi 1767287505 2094 EKITLLKKIELLENEKRR 2111
Cdd:TIGR02168 483 ELAQLQARLDSLERLQEN 500
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
489-1271 |
2.29e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 76.26 E-value: 2.29e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 489 DLLEELRKIrgggssEGDAELH-KELMTKYEESIERNI-ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKL--HE 564
Cdd:TIGR02169 215 ALLKEKREY------EGYELLKeKEALERQKEAIERQLaSLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgeEE 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 565 MAQDSEKNVDGTVSIKRTRSlspgktplppsealravrnTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLD 644
Cdd:TIGR02169 289 QLRVKEKIGELEAEIASLER-------------------SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEER 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 645 KQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASfQKSSTDDARKLRDEMDEHTNS 724
Cdd:TIGR02169 350 KRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE-LDRLQEELQRLSEELADLNAA 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 725 I------QEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD 798
Cdd:TIGR02169 429 IagieakINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRG 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 799 LREKYDRVHTDNEKILGEL--------EHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARH----------LFDIRHKLE 860
Cdd:TIGR02169 509 GRAVEEVLKASIQGVHGTVaqlgsvgeRYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRrkagratflpLNKMRDERR 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 861 TEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDeldtTIKGHQGKI--THLENELHSRSGEI------EKL 932
Cdd:TIGR02169 589 DLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIE----AARRLMGKYrmVTLEGELFEKSGAMtggsraPRG 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 933 NDLNQRLQKEKQDILNQKL-KLDGDVQALKETIRKLENELEKLRNENKELVGKEARARdaanqqlSRANLLNKELEDTKQ 1011
Cdd:TIGR02169 665 GILFSRSEPAELQRLRERLeGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIE-------KEIEQLEQEEEKLKE 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1012 DLKHSTDVNKQLEQDIRDLKERLANIGKggRIS-RDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVpaaEDIESRGGG 1090
Cdd:TIGR02169 738 RLEELEEDLSSLEQEIENVKSELKELEA--RIEeLEEDLHKLEEALNDLEARLSHSRIPEIQAELSKL---EEEVSRIEA 812
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1091 EIDipsSGDVIHGRDGRDGRDAGNRgthtITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKR---ELERLENEKD 1167
Cdd:TIGR02169 813 RLR---EIEQKLNRLTLEKEYLEKE----IQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEEleaALRDLESRLG 885
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1168 DLERRIRELEDELSQIGRGNDKTENDItELKRKHAAEidkLKSDISALHDKhLSDLDDEKEQ----------YGKAVENL 1237
Cdd:TIGR02169 886 DLKKERDELEAQLRELERKIEELEAQI-EKKRKRLSE---LKAKLEALEEE-LSEIEDPKGEdeeipeeelsLEDVQAEL 960
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 1238 KSVE------------------------DDLRDKLNNLEKQLADSLNRENELEREKRD 1271
Cdd:TIGR02169 961 QRVEeeiralepvnmlaiqeyeevlkrlDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1776-2095 |
2.45e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.13 E-value: 2.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1776 RYRNIEDNLQDAEEE-----RRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNL 1850
Cdd:COG1196 214 RYRELKEELKELEAEllllkLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYEL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1851 RTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESdsdtnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDD 1930
Cdd:COG1196 294 LAELARLEQDIARLEERRRELEERLEELEEELAEL-------EEELEELEEELEELEEELEEAEEELEEAEAELAEAEEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1931 TDKLRRDLTKAESVENELRKtidiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR 2010
Cdd:COG1196 367 LLEAEAELAEAEEELEELAE----------ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2011 VSELQRQLQDANTEKNRVEDRFLSVEKVVntmrtteTDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDG 2090
Cdd:COG1196 437 EEEEEEALEEAAEEEAELEEEEEALLELL-------AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
....*
gi 1767287505 2091 WKKEK 2095
Cdd:COG1196 510 VKAAL 514
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1933-2217 |
4.07e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.36 E-value: 4.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1933 KLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVS 2012
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2013 ELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWK 2092
Cdd:COG1196 299 RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2093 KEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELykncaqlqqqiAQLEMENGNRILELTNKQREE 2172
Cdd:COG1196 379 EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL-----------EEALAELEEEEEEEEEALEEA 447
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1767287505 2173 QERQLIRMRQEKGQIEKVIENRERThrnriKQLEDQIAILRDQLD 2217
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEA-----ALLEAALAELLEELA 487
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
720-1518 |
4.62e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 75.15 E-value: 4.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 720 EHTNSIQEEFKTRIDELNRRvenlLRENNRLKSevnplKDKYRdLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDL 799
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRR----LNESNELHE-----KQKFY-LRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 800 REKY-DRVHtdnekilgELEHAQKaahLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLeteikgrQDLEKNGARNND 878
Cdd:pfam15921 144 RNQLqNTVH--------ELEAAKC---LKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSIL-------VDFEEASGKKIY 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 879 ELDKLrqTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEklNDLNQRLQKEKQDILNQKLKLDGDVQ 958
Cdd:pfam15921 206 EHDSM--STMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQ--NKIELLLQQHQDRIEQLISEHEVEIT 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 959 ALKETIRKLENELEKLRNEnKELVGKEARARDAAN-QQLSranllnkELEDTKQDLKHSTDVNKQLEQD-IRDLKERL-- 1034
Cdd:pfam15921 282 GLTEKASSARSQANSIQSQ-LEIIQEQARNQNSMYmRQLS-------DLESTVSQLRSELREAKRMYEDkIEELEKQLvl 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1035 ANigkggriSRDSTTGTDGGAFGDRSSVADPSRTRGAAGstvfvpaaediesrgggeidipssgdvIHGRDgrdgrdagn 1114
Cdd:pfam15921 354 AN-------SELTEARTERDQFSQESGNLDDQLQKLLAD---------------------------LHKRE--------- 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1115 rgtHTITNTKERieriEKNILDRYHDDEL-VEHKIREVNDRwKRELERLENEKDDLERRIR-ELEDELSQIGRGNDKTEN 1192
Cdd:pfam15921 391 ---KELSLEKEQ----NKRLWDRDTGNSItIDHLRRELDDR-NMEVQRLEALLKAMKSECQgQMERQMAAIQGKNESLEK 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1193 ---------DITELKRKHAAEIDKLKSDISAlHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNREN 1263
Cdd:pfam15921 463 vssltaqleSTKEMLRKVVEELTAKKMTLES-SERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGD 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1264 ELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTdaytvrseAKALETTNTALKAQLQAANDRIDHLTKTV 1343
Cdd:pfam15921 542 HLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRT--------AGAMQVEKAQLEKEINDRRLELQEFKILK 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1344 NDHTSKVRDLTSQVRHLEDEladtKGNLVQkemdleSTQNRLRSLED---QHSTLQSDANKWRGELDAALRENDILKSNN 1420
Cdd:pfam15921 614 DKKDAKIRELEARVSDLELE----KVKLVN------AGSERLRAVKDikqERDQLLNEVKTSRNELNSLSEDYEVLKRNF 683
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1421 TN----METDLTRLKNRLKSAEDALKELKNSLshaktekERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDK 1496
Cdd:pfam15921 684 RNkseeMETTTNKLKMQLKSAQSELEQTRNTL-------KSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEA 756
|
810 820
....*....|....*....|..
gi 1767287505 1497 LITSDTERNALRNELQKLSQEL 1518
Cdd:pfam15921 757 MTNANKEKHFLKEEKNKLSQEL 778
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
535-1037 |
5.35e-13 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 74.95 E-value: 5.35e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 535 QRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDgtvsikrtrslspgktplppsEALRAVRNtfrNKDNDIQQ 614
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELD---------------------ELEAQIRG---NGGDRLEQ 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 615 LERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQK----SVDEAERNSRRTDDKLRASEAERVAAEKARK 690
Cdd:COG4913 343 LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAeaaaLLEALEEELEALEEALAEAEAALRDLRRELR 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 691 FLEDELAKLQASfQKSSTDDARKLRDEMDEHTNSIQEE---------------------------FKTRI-------DEL 736
Cdd:COG4913 423 ELEAEIASLERR-KSNIPARLLALRDALAEALGLDEAElpfvgelievrpeeerwrgaiervlggFALTLlvppehyAAA 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 737 NRRVENL-LREnnRLKSE-VNPLKDKYRDLENEYNSTQRRIEEKETQIRY-----------------SDDIRRNIQ---- 793
Cdd:COG4913 502 LRWVNRLhLRG--RLVYErVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAwleaelgrrfdyvcvdsPEELRRHPRaitr 579
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 794 ----KDLDDLREKYDRVHTDNEKILG------------ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLF---- 853
Cdd:COG4913 580 agqvKGNGTRHEKDDRRRIRSRYVLGfdnraklaaleaELAELEEELAEAEERLEALEAELDALQERREALQRLAEyswd 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 854 DIRHK-LETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENEL---------H 923
Cdd:COG4913 660 EIDVAsAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELdelqdrleaA 739
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 924 SRSGEIEKLNDLNQRLQKEKQDILNQKLK--LDGDVQALKETIRKLENELEKLRNENKEL-------VGKEARARDAANQ 994
Cdd:COG4913 740 EDLARLELRALLEERFAAALGDAVERELRenLEERIDALRARLNRAEEELERAMRAFNREwpaetadLDADLESLPEYLA 819
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 995 QLSRanLLNKELEDTKQDLKHS---------TDVNKQLEQDIRDLKERLANI 1037
Cdd:COG4913 820 LLDR--LEEDGLPEYEERFKELlnensiefvADLLSKLRRAIREIKERIDPL 869
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1734-2142 |
8.19e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 74.29 E-value: 8.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1734 TLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEER---------------------R 1792
Cdd:TIGR04523 205 NLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQnkikkqlsekqkeleqnnkkiK 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1793 ALESRLQSAKTLL-----RSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTD------- 1860
Cdd:TIGR04523 285 ELEKQLNQLKSEIsdlnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESEnsekqre 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1861 --------------IRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELdgalrlsDSKVQD 1926
Cdd:TIGR04523 365 leekqneieklkkeNQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERL-------KETIIK 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1927 MKDDTDKLRRDLTKAESVENELRKTIDIQ----SKTSHEYQLLKDQLLNTQNELngannrkQQLENELLNVRSEVRDYKQ 2002
Cdd:TIGR04523 438 NNSEIKDLTNQDSVKELIIKNLDNTRESLetqlKVLSRSINKIKQNLEQKQKEL-------KSKEKELKKLNEEKKELEE 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2003 RVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETdlRQQLETAKNEKRvatKELEDLKRRLAQLENERR 2082
Cdd:TIGR04523 511 KVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELK--KENLEKEIDEKN---KEIEELKQTQKSLKKKQE 585
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 2083 NSSQLSDGWKKEKITLLKKIEL-------LENEKRRTDAAIRETALQREAIEKSLNAMERENKELYK 2142
Cdd:TIGR04523 586 EKQELIDQKEKEKKDLIKEIEEkekkissLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKE 652
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1831-2208 |
1.12e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.94 E-value: 1.12e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1831 LQARGKEA--QLRHLNEQLKNLrtdldnahTDIrsLRDKEEQWDSSRFQLETkmresdsdTNKYQ-LQIASFESERQILT 1907
Cdd:TIGR02168 170 YKERRKETerKLERTRENLDRL--------EDI--LNELERQLKSLERQAEK--------AERYKeLKAELRELELALLV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1908 EKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRktiDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE 1987
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELR---LEVSELEEEIEELQKELYALANEISRLEQQKQILR 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1988 NELLNVrseVRDYKQrvhdVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNtmrttetDLRQQLETAKNEKRVATKEL 2067
Cdd:TIGR02168 309 ERLANL---ERQLEE----LEAQLEELESKLDELAEELAELEEKLEELKEELE-------SLEAELEELEAELEELESRL 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2068 EDLKrrlAQLENERRNSSQlsdgwkkekitLLKKIELLENEKRRTDAairetalQREAIEKSLNAMERENKELYKNCAQL 2147
Cdd:TIGR02168 375 EELE---EQLETLRSKVAQ-----------LELQIASLNNEIERLEA-------RLERLEDRRERLQQEIEELLKKLEEA 433
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 2148 QQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVI---ENRERTHRNRIKQLEDQ 2208
Cdd:TIGR02168 434 ELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALdaaERELAQLQARLDSLERL 497
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1728-2216 |
1.58e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.55 E-value: 1.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1728 IANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAK----- 1802
Cdd:TIGR02168 360 LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElkelq 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1803 ----------TLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQ-- 1870
Cdd:TIGR02168 440 aeleeleeelEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGls 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1871 ------WDSSRFQ------LETKMRES-----DSDTNKYQLQIASFESER----------QILTEKIKELDGALRLSDSK 1923
Cdd:TIGR02168 520 gilgvlSELISVDegyeaaIEAALGGRlqavvVENLNAAKKAIAFLKQNElgrvtflpldSIKGTEIQGNDREILKNIEG 599
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1924 VQDMKDDTDKLRRDLTKAES-------VENELRKTIDIQSKTSHEYQLLKDQ--------------------LLNTQNEL 1976
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKALSyllggvlVVDDLDNALELAKKLRPGYRIVTLDgdlvrpggvitggsaktnssILERRREI 679
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1977 NGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETA 2056
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2057 KNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERE 2136
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERR 839
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2137 NKELykncaqlqqqiaQLEMENGNRILELTNKQREEQ-------ERQLIRMRQEKGQIEKVIENRE----------RTHR 2199
Cdd:TIGR02168 840 LEDL------------EEQIEELSEDIESLAAEIEELeelieelESELEALLNERASLEEALALLRseleelseelRELE 907
|
570
....*....|....*..
gi 1767287505 2200 NRIKQLEDQIAILRDQL 2216
Cdd:TIGR02168 908 SKRSELRRELEELREKL 924
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
787-1406 |
1.93e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 73.15 E-value: 1.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 787 DIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHlaEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGR 866
Cdd:PRK02224 173 DARLGVERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGL--ESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 867 QDLEKNGArnndELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDI 946
Cdd:PRK02224 251 EELETLEA----EIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEEL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 947 LNQKLKLDGDVQALKETIRKLENELEKLRNENKELvgKEARARdaanqqlsranlLNKELEDTKQDLKHSTDVNKQLEQD 1026
Cdd:PRK02224 327 RDRLEECRVAAQAHNEEAESLREDADDLEERAEEL--REEAAE------------LESELEEAREAVEDRREEIEELEEE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1027 IRDLKERLANigkggrisrdstTGTDGGAFGDRSS--VADPSRTRGAAGSTvfvpaaediesrgggEIDIPSSGDVIhgR 1104
Cdd:PRK02224 393 IEELRERFGD------------APVDLGNAEDFLEelREERDELREREAEL---------------EATLRTARERV--E 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1105 DGRDGRDAGNRGT-----------HTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWK--RELERLENEKDDLER 1171
Cdd:PRK02224 444 EAEALLEAGKCPEcgqpvegsphvETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEaeDRIERLEERREDLEE 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1172 RIRELEDELsqigrgndktenditELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDL------R 1245
Cdd:PRK02224 524 LIAERRETI---------------EEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLaelkerI 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1246 DKLNNLEKQLADSLNRENELE--REKRdydekinslygqnqKIKDEWDDFRNDADKEIQKWKTDAytvrsEAKALETTNT 1323
Cdd:PRK02224 589 ESLERIRTLLAAIADAEDEIErlREKR--------------EALAELNDERRERLAEKRERKREL-----EAEFDEARIE 649
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1324 ALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKgNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWR 1403
Cdd:PRK02224 650 EAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELE-ELRERREALENRVEALEALYDEAEELESMYGDLR 728
|
...
gi 1767287505 1404 GEL 1406
Cdd:PRK02224 729 AEL 731
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
613-1519 |
2.03e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 73.23 E-value: 2.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 613 QQLERKLKIAESQVKEFLNKFENADEARrrlDKQFADAKREISNLQKSVDEA--ERNSRrTDDKLRASEAErvaaEKARK 690
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELH---EKQKFYLRQSVIDLQTKLQEMqmERDAM-ADIRRRESQSQ----EDLRN 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 691 FLEDELAKLQAS------FQKSSTDDARKLRDEMDEHTNSIQEEFKTRID---------------------ELNRRVENL 743
Cdd:pfam15921 146 QLQNTVHELEAAkclkedMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDfeeasgkkiyehdsmstmhfrSLGSAISKI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 744 LRENNR----LKSEVNPLKDKYRDLENEynsTQRRIEEKETQirYSDDIRRNIQK---DLDDLREKYDRVHTDNEKILGE 816
Cdd:pfam15921 226 LRELDTeisyLKGRIFPVEDQLEALKSE---SQNKIELLLQQ--HQDRIEQLISEhevEITGLTEKASSARSQANSIQSQ 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 817 LEHAQKAA---------HLAE------QQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELD 881
Cdd:pfam15921 301 LEIIQEQArnqnsmymrQLSDlestvsQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQ 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 882 KLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---------- 951
Cdd:pfam15921 381 KLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMaaiqgknesl 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 952 ----KLDGDVQALKETIRKLENEL--EKLRNENKE---------LVGKEaRARDAANQQL----SRANLLNKELEDTKQD 1012
Cdd:pfam15921 461 ekvsSLTAQLESTKEMLRKVVEELtaKKMTLESSErtvsdltasLQEKE-RAIEATNAEItklrSRVDLKLQELQHLKNE 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1013 LKHSTDVNKQLEQdirdLKERLANIGKGGRISRdsttgtdggafgdrssvadpsrtrgaagstvfvpaaEDIESrgggei 1092
Cdd:pfam15921 540 GDHLRNVQTECEA----LKLQMAEKDKVIEILR------------------------------------QQIEN------ 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1093 dipssgdvIHGRDGRDGRDAGNRgthtitntkerieRIEKNILDryhddelvehkiREVNDRwKRELERLENEKDDLERR 1172
Cdd:pfam15921 574 --------MTQLVGQHGRTAGAM-------------QVEKAQLE------------KEINDR-RLELQEFKILKDKKDAK 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1173 IRELEDELSQIgrgndktenditelkrkhaaEIDKLKsdisalhdkhlsdLDDEKEQYGKAVENLKSVEDDLRDKLNNLE 1252
Cdd:pfam15921 620 IRELEARVSDL--------------------ELEKVK-------------LVNAGSERLRAVKDIKQERDQLLNEVKTSR 666
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1253 KQLaDSLNRENELerEKRDYDEKINSLYGQNQKIKdewddfrndadKEIQKWKTDAYTVRSEAKALETTNT-ALKAQLQa 1331
Cdd:pfam15921 667 NEL-NSLSEDYEV--LKRNFRNKSEEMETTTNKLK-----------MQLKSAQSELEQTRNTLKSMEGSDGhAMKVAMG- 731
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1332 andridhLTKTVNDHTSKVRDLTSQVRHLEDELAdtkgNLVQKEMDLESTQNRlrsLEDQHSTLQSDANKWRGELDAALR 1411
Cdd:pfam15921 732 -------MQKQITAKRGQIDALQSKIQFLEEAMT----NANKEKHFLKEEKNK---LSQELSTVATEKNKMAGELEVLRS 797
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1412 ENDILKSNNTNMETDLTRLKNRLKSAEDALKE-----LKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQfdTKLTKL 1486
Cdd:pfam15921 798 QERRLKEKVANMEVALDKASLQFAECQDIIQRqeqesVRLKLQHTLDVKELQGPGYTSNSSMKPRLLQPASF--TRTHSN 875
|
970 980 990
....*....|....*....|....*....|....*..
gi 1767287505 1487 RNELQDTNDKLITSDTERNALRN----ELQKLSQELK 1519
Cdd:pfam15921 876 VPSSQSTASFLSHHSRKTNALKEdptrDLKQLLQELR 912
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1784-2130 |
3.30e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.41 E-value: 3.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1784 LQDAEEERRALESRLQSAKTLLrsqEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRS 1863
Cdd:TIGR02169 172 KEKALEELEEVEENIERLDLII---DEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1864 LRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQI-LTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAE 1942
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLrVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1943 SVENELRKTIDIQSKTSHEYQLLKDQLL----NTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQL 2018
Cdd:TIGR02169 329 AEIDKLLAEIEELEREIEEERKRRDKLTeeyaELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKREL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2019 QDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITL 2098
Cdd:TIGR02169 409 DRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKL 488
|
330 340 350
....*....|....*....|....*....|..
gi 1767287505 2099 LKKIELLENEKRRTDAAIRETALQREAIEKSL 2130
Cdd:TIGR02169 489 QRELAEAEAQARASEERVRGGRAVEEVLKASI 520
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
760-1606 |
4.66e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 4.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 760 KYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLrEKYDRVHTDNEKILGELEHAQKAAHlaEQQLKEIKIQRD 839
Cdd:TIGR02169 171 KKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKA-ERYQALLKEKREYEGYELLKEKEAL--ERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 840 DYQKQKDEHARHLFDIRHKLET-EIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHL 918
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRLEEiEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 919 ENELHSRSGEIEKLNDLNQRLQKEKQdilnqklkldgdvqALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSR 998
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRD--------------KLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 999 ANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIgkggrisrdsttgtdggafgdrssvadpsrtrgAAGSTVFV 1078
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGI---------------------------------EAKINELE 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1079 PAAEDIesrgggeidipssgdvihgrdgrdgrdagnrgthtitntKERIERIEKNIldryhddelveHKIREVNDRWKRE 1158
Cdd:TIGR02169 441 EEKEDK---------------------------------------ALEIKKQEWKL-----------EQLAADLSKYEQE 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1159 LERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVE--- 1235
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEA----EAQARASEERVRGGRAVEEVLKASIQGVHGT-VAQLGSVGERYATAIEvaa 545
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1236 ----NLKSVEDD---------LRDKlnNLEKQLADSLNRENELEREKR---------------DYDEKINSLYGQN---- 1283
Cdd:TIGR02169 546 gnrlNNVVVEDDavakeaielLKRR--KAGRATFLPLNKMRDERRDLSilsedgvigfavdlvEFDPKYEPAFKYVfgdt 623
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1284 ------QKIKDEWDDFRN-DADKEIQKwKTDAYTVRSEA-KALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTS 1355
Cdd:TIGR02169 624 lvvediEAARRLMGKYRMvTLEGELFE-KSGAMTGGSRApRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEN 702
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1356 QVRHLEDELADTKGNLVQKEMDLEStqnrlrsledqhstLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1435
Cdd:TIGR02169 703 RLDELSQELSDASRKIGEIEKEIEQ--------------LEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIE 768
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1436 SAEDALKELKNSLshAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNalrnELQKLS 1515
Cdd:TIGR02169 769 ELEEDLHKLEEAL--NDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQ----ELQEQR 842
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1516 QELKFGNEQIQRKSDEYQTTIDDLAhshrvsedsrlnalQELEARKYEINDLTSRL-------DSTEQRLATLQQDYIKA 1588
Cdd:TIGR02169 843 IDLKEQIKSIEKEIENLNGKKEELE--------------EELEELEAALRDLESRLgdlkkerDELEAQLRELERKIEEL 908
|
890
....*....|....*...
gi 1767287505 1589 DSERDILSDALRRFQSSA 1606
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKL 926
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
746-1401 |
4.89e-12 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 71.86 E-value: 4.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 746 ENNRLKSEVNPLKDKYRDLENEYNStqrrIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAH 825
Cdd:PRK01156 160 EINSLERNYDKLKDVIDMLRAEISN----IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYN 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 826 LAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLrrhnDELD 905
Cdd:PRK01156 236 NLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDI----ENKK 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 906 TTIKGHQGKITHLEnELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKE 985
Cdd:PRK01156 312 QILSNIDAEINKYH-AIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMS 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 986 ARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRI-SRDSTTGTDGGAFGDRSSvad 1064
Cdd:PRK01156 391 AFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMlNGQSVCPVCGTTLGEEKS--- 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1065 psrtrgaagstvfvpaaediesrgggeidipssgdvihgrdgrdgRDAGNRGTHTITNTKERIERIEKNILDRyhdDELV 1144
Cdd:PRK01156 468 ---------------------------------------------NHIINHYNEKKSRLEEKIREIEIEVKDI---DEKI 499
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1145 EHKIREVNDRWKRELERLENEKDDLERRIRELEDElsqigrgndktENDITELKRKHaaeiDKLKSDISALHDKHLSDLD 1224
Cdd:PRK01156 500 VDLKKRKEYLESEEINKSINEYNKIESARADLEDI-----------KIKINELKDKH----DKYEEIKNRYKSLKLEDLD 564
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1225 DEKEQYGKAVENLKSVE-DDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGqnqKIKDEWDDFRNDAdKEIQK 1303
Cdd:PRK01156 565 SKRTSWLNALAVISLIDiETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIR---EIENEANNLNNKY-NEIQE 640
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1304 WKTDAYTVRSEAKalettntalkaQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQN 1383
Cdd:PRK01156 641 NKILIEKLRGKID-----------NYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRT 709
|
650
....*....|....*...
gi 1767287505 1384 RLRSLEDQHSTLQSDANK 1401
Cdd:PRK01156 710 RINELSDRINDINETLES 727
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1727-2195 |
5.11e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 71.63 E-value: 5.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1727 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTI------NQKETRYRNIEDNLQDAEEERRALESRLQS 1800
Cdd:PRK03918 253 SKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIklsefyEEYLDELREIEKRLSRLEEEINGIEERIKE 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1801 AKTLLRSQEEALKQRDE-ERRQMKSKMVAAELQ-ARGKEAQLRHLNEQLKNLrtDLDNAHTDIRSLRDKEEQWDSSRFQL 1878
Cdd:PRK03918 333 LEEKEERLEELKKKLKElEKRLEELEERHELYEeAKAKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKI 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1879 ETKMRESDSDTNKYQLQIASFESERQI-------LTEKIKEldGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKT 1951
Cdd:PRK03918 411 TARIGELKKEIKELKKAIEELKKAKGKcpvcgreLTEEHRK--ELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKV 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1952 IDIQSKTSHEYQLLkDQLLNTQNELNGANNRKQQLENEllnvrsEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEdr 2031
Cdd:PRK03918 489 LKKESELIKLKELA-EQLKELEEKLKKYNLEELEKKAE------EYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLA-- 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2032 flSVEKVVNTMRTTETDLRQQLEtaknekRVATKELEDLKRRLAQLENERRNSSQLSDGwKKEKITLLKKIELLENEKRR 2111
Cdd:PRK03918 560 --ELEKKLDELEEELAELLKELE------ELGFESVEELEERLKELEPFYNEYLELKDA-EKELEREEKELKKLEEELDK 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2112 TDAAIRETALQREAIEKSLNAMERE-NKELYKNcAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKV 2190
Cdd:PRK03918 631 AFEELAETEKRLEELRKELEELEKKySEEEYEE-LREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKA 709
|
....*
gi 1767287505 2191 IENRE 2195
Cdd:PRK03918 710 KKELE 714
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
541-1279 |
5.15e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.89 E-value: 5.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 541 LEAELRRNREKLnEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLSpgktplppsEALRAVRNTFRNKDNDIQQLERKLK 620
Cdd:COG1196 194 ILGELERQLEPL-ERQAEKAERYRELKEELKELEAELLLLKLRELE---------AELEELEAELEELEAELEELEAELA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 621 IAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQ 700
Cdd:COG1196 264 ELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 701 ASfqksstddarklrdemdehtnsiQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKET 780
Cdd:COG1196 344 EE-----------------------LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 781 QIrysddirRNIQKDLDDLREkydrvhtdnekilgELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLE 860
Cdd:COG1196 401 QL-------EELEEAEEALLE--------------RLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEE 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 861 TEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELdttikghqgkithlenELHSRSGEIEKLNDLNQRLQ 940
Cdd:COG1196 460 ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY----------------EGFLEGVKAALLLAGLRGLA 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 941 KEKQDILnqklkldGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANqQLSRANLLnkELEDTKQDLKHSTDVN 1020
Cdd:COG1196 524 GAVAVLI-------GVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAA-KAGRATFL--PLDKIRARAALAAALA 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1021 KQLEQDIRDLKERLAnigkggrISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDV 1100
Cdd:COG1196 594 RGAIGAAVDLVASDL-------READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGS 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1101 IHGRDGRDGRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEHKIREV--NDRWKRELERLENEKDDLERRIRELED 1178
Cdd:COG1196 667 RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLeeELEEEALEEQLEAEREELLEELLEEEE 746
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1179 ELSQIGRGNDKTENDITELKRkhaaEIDKLKSDISALhdkhlsdlddekeqyGkAVeNLKSVE--DDLRDKLNNLEKQLA 1256
Cdd:COG1196 747 LLEEEALEELPEPPDLEELER----ELERLEREIEAL---------------G-PV-NLLAIEeyEELEERYDFLSEQRE 805
|
730 740
....*....|....*....|...
gi 1767287505 1257 DslnreneLEREKRDYDEKINSL 1279
Cdd:COG1196 806 D-------LEEARETLEEAIEEI 821
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1736-2140 |
5.42e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 71.61 E-value: 5.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1736 QSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQR 1815
Cdd:PRK02224 310 EAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEEL 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1816 DEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQwdSSRFQLETKMRESDSD------- 1888
Cdd:PRK02224 390 EEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEE--AEALLEAGKCPECGQPvegsphv 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1889 --TNKYQLQIASFESERQILTEKIKELDGALrlsdSKVQDMKDDTDKLRRDLTKAESVEnelrKTIDIQSKTSHEYQLLK 1966
Cdd:PRK02224 468 etIEEDRERVEELEAELEDLEEEVEEVEERL----ERAEDLVEAEDRIERLEERREDLE----ELIAERRETIEEKRERA 539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1967 DQLlntqnelngaNNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDrflsvekvVNTMRTTE 2046
Cdd:PRK02224 540 EEL----------RERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLER--------IRTLLAAI 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2047 TDLRQQLETaKNEKRVATKELEDLKRRLAQLENERRnsSQLSDGWKKEKITLLK-KIELLENEKRRTDAAIRETALQREA 2125
Cdd:PRK02224 602 ADAEDEIER-LREKREALAELNDERRERLAEKRERK--RELEAEFDEARIEEAReDKERAEEYLEQVEEKLDELREERDD 678
|
410
....*....|....*
gi 1767287505 2126 IEKSLNAMERENKEL 2140
Cdd:PRK02224 679 LQAEIGAVENELEEL 693
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
854-1464 |
6.11e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 71.25 E-value: 6.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 854 DIRHKLETEIKGRQDLE---KNGARNNDELDKLRQTISDY---ESQI-NLLRRHNDELDTTIKghqgKITHLENELHSRS 926
Cdd:PRK03918 145 ESREKVVRQILGLDDYEnayKNLGEVIKEIKRRIERLEKFikrTENIeELIKEKEKELEEVLR----EINEISSELPELR 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 927 GEIEKLNDLNQRLQKEKQDILN---QKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLsRANLLN 1003
Cdd:PRK03918 221 EELEKLEKEVKELEELKEEIEElekELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAE-EYIKLS 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1004 KELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpAAED 1083
Cdd:PRK03918 300 EFYEEYLDELREIEKRLSRLEEEINGIEERIKELEE----------------------------------------KEER 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1084 IESRGGGEIDIPSSGDVIHGRdgrdgrdagNRGTHTITNTKERIERIEKNILDRyhDDELVEHKIREVNDRWK---RELE 1160
Cdd:PRK03918 340 LEELKKKLKELEKRLEELEER---------HELYEEAKAKKEELERLKKRLTGL--TPEKLEKELEELEKAKEeieEEIS 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1161 RLENEKDDLERRIRELEDELSQIGRGNDK--------TENDITELKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGK 1232
Cdd:PRK03918 409 KITARIGELKKEIKELKKAIEELKKAKGKcpvcgrelTEEHRKELLEEYTAELKRIEKELKEIEEK-ERKLRKELRELEK 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1233 AVENLK--SVEDDLRDKLNNLEKQLaDSLNREnELEREKRDYD---EKINSLYGQNQKIKDEWddfrndadKEIQKWKTD 1307
Cdd:PRK03918 488 VLKKESelIKLKELAEQLKELEEKL-KKYNLE-ELEKKAEEYEklkEKLIKLKGEIKSLKKEL--------EKLEELKKK 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1308 AYTVRSEAKALETTNTALKAQLQAA--------NDRIDHLTKTVNDHTSkVRDLTSQVRHLEDELADTKGNLVQKEMDLE 1379
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELEELgfesveelEERLKELEPFYNEYLE-LKDAEKELEREEKELKKLEEELDKAFEELA 636
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1380 STQNRLRSLEDQHSTLQSDANKwrgeldaalRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQ 1459
Cdd:PRK03918 637 ETEKRLEELRKELEELEKKYSE---------EEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE 707
|
....*
gi 1767287505 1460 NAFRE 1464
Cdd:PRK03918 708 KAKKE 712
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
605-1253 |
6.94e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 71.25 E-value: 6.94e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 605 FRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKsvdeaerNSRRTDDKLRASEAERVA 684
Cdd:PRK03918 160 YENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISS-------ELPELREELEKLEKEVKE 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 685 AEKARKFLEdELAKLQASFQKSstddARKLRDEMDEHTNSIqEEFKTRIDELNRRVENLlrennrlkSEVNPLKDKYRDL 764
Cdd:PRK03918 233 LEELKEEIE-ELEKELESLEGS----KRKLEEKIRELEERI-EELKKEIEELEEKVKEL--------KELKEKAEEYIKL 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 765 E---NEYNSTQRRIEEKETqiRYSDDIrRNIQKDLDDLREKYDRVhtdnEKILGELEHAQ------KAAHLAEQQLKEIK 835
Cdd:PRK03918 299 SefyEEYLDELREIEKRLS--RLEEEI-NGIEERIKELEEKEERL----EELKKKLKELEkrleelEERHELYEEAKAKK 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 836 IQRDDYQKQKDEhaRHLFDIRHKLETEIKGRQDLEKngarnndELDKLRQTISDYESQINLLRRHNDELdttiKGHQGKI 915
Cdd:PRK03918 372 EELERLKKRLTG--LTPEKLEKELEELEKAKEEIEE-------EISKITARIGELKKEIKELKKAIEEL----KKAKGKC 438
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 916 ---------THLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETI--RKLENELEKLRNENKELVGK 984
Cdd:PRK03918 439 pvcgrelteEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIklKELAEQLKELEEKLKKYNLE 518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 985 EARARDAANQQL-SRANLLNKELEDTKQDLKHSTDVNKQ---LEQDIRDLKERLANIGKggrisrdsttgtdggafgdrs 1060
Cdd:PRK03918 519 ELEKKAEEYEKLkEKLIKLKGEIKSLKKELEKLEELKKKlaeLEKKLDELEEELAELLK--------------------- 577
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1061 svadpsrtrgaagstvfvpaaediesrgggeidipssgdvihgrdgrdgrDAGNRGTHTITNTKERIERIEKnILDRYhd 1140
Cdd:PRK03918 578 --------------------------------------------------ELEELGFESVEELEERLKELEP-FYNEY-- 604
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1141 delveHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKRKHAAEIDKLKSDISALHDKHL 1220
Cdd:PRK03918 605 -----LELKDAEKELEREEKELKKLEEELDKAFEELAETEKRL----EELRKELEELEKKYSEEEYEELREEYLELSREL 675
|
650 660 670
....*....|....*....|....*....|...
gi 1767287505 1221 SDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEK 1253
Cdd:PRK03918 676 AGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1896-2245 |
1.37e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.48 E-value: 1.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1896 IASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDI-QSKTSHEYQLLKDQLLNTQN 1974
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYeGYELLKEKEALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1975 ELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELqrqlqdANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLE 2054
Cdd:TIGR02169 245 QLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDL------GEEEQLRVKEKIGELEAEIASLERSIAEKERELE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2055 TAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAME 2134
Cdd:TIGR02169 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2135 RENKELYKNCAQLQQQIAQLEMENGN----------RILEL----TNKQRE--EQERQLIRMRQEKGQIEKVIENRERTH 2198
Cdd:TIGR02169 399 REINELKRELDRLQEELQRLSEELADlnaaiagieaKINELeeekEDKALEikKQEWKLEQLAADLSKYEQELYDLKEEY 478
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2199 R---NRIKQLEDQIAILRDQLDGERRRRREYVDRSMVndigrLGSNVLGI 2245
Cdd:TIGR02169 479 DrveKELSKLQRELAEAEAQARASEERVRGGRAVEEV-----LKASIQGV 523
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1932-2217 |
2.29e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.70 E-value: 2.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1932 DKLRRDLTKAESVENELRK---TIDIQSKTSHEYQLLKDQLLNTQNELNGanNRKQQLENELLNVRSEVRDYKQRVHDVN 2008
Cdd:TIGR02168 182 ERTRENLDRLEDILNELERqlkSLERQAEKAERYKELKAELRELELALLV--LRLEELREELEELQEELKEAEEELEELT 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2009 NRVSELQRQLQDANTEKNRVEDRFLSVEKVVNtmrttetDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLS 2088
Cdd:TIGR02168 260 AELQELEEKLEELRLEVSELEEEIEELQKELY-------ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2089 DGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEME---NGNRILEL 2165
Cdd:TIGR02168 333 DELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEierLEARLERL 412
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 2166 T-NKQREEQERQLIRMRQEKGQIEKVIEN-------------RERTHRNRIKQLEDQIAILRDQLD 2217
Cdd:TIGR02168 413 EdRRERLQQEIEELLKKLEEAELKELQAEleeleeeleelqeELERLEEALEELREELEEAEQALD 478
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1735-2216 |
2.32e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 69.71 E-value: 2.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1735 LQSLLNKIEKLEMERNELRDTLARMKKKTTethttinQKETRYRNIEDNLQDAEEERRALESRLQSAKtllrsqeEALKQ 1814
Cdd:TIGR02169 387 LKDYREKLEKLKREINELKRELDRLQEELQ-------RLSEELADLNAAIAGIEAKINELEEEKEDKA-------LEIKK 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1815 RDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRdkEEQWDSSRFQLETK---------MRES 1885
Cdd:TIGR02169 453 QEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASE--ERVRGGRAVEEVLKasiqgvhgtVAQL 530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1886 DSDTNKYQLQIASFESER----------------QILteKIKELDGALRLSDSKVQDMKDDTDKLRR------------- 1936
Cdd:TIGR02169 531 GSVGERYATAIEVAAGNRlnnvvveddavakeaiELL--KRRKAGRATFLPLNKMRDERRDLSILSEdgvigfavdlvef 608
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1937 DLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNEL---NGA-------------------------NNRKQQLEN 1988
Cdd:TIGR02169 609 DPKYEPAFKYVFGDTLVVEDIEAARRLMGKYRMVTLEGELfekSGAmtggsraprggilfsrsepaelqrlRERLEGLKR 688
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1989 ELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELE 2068
Cdd:TIGR02169 689 ELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIE 768
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2069 DLKRRLAQLENERRNSSQLSDGWKKEKITllKKIELLENEKRRTDAAIRET--ALQREAIEKSLNAMERENKELYKNCAQ 2146
Cdd:TIGR02169 769 ELEEDLHKLEEALNDLEARLSHSRIPEIQ--AELSKLEEEVSRIEARLREIeqKLNRLTLEKEYLEKEIQELQEQRIDLK 846
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 2147 LQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRE---RTHRNRIKQLEDQIAILRDQL 2216
Cdd:TIGR02169 847 EQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEaqlRELERKIEELEAQIEKKRKRL 919
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1120-1584 |
2.39e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 69.32 E-value: 2.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1120 ITNTKERIERIEKNILDRYHDDELVEHKIREVNDRwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKR 1199
Cdd:PRK03918 202 LEEVLREINEISSELPELREELEKLEKEVKELEEL-KEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1200 KhAAEIDKLKSD------ISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRD------KLNNLEKQLADSLNRENELER 1267
Cdd:PRK03918 281 K-VKELKELKEKaeeyikLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEleekeeRLEELKKKLKELEKRLEELEE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1268 EKRDYdEKINSLYGQNQKIKDEWDDFR-NDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKT---- 1342
Cdd:PRK03918 360 RHELY-EEAKAKKEELERLKKRLTGLTpEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAkgkc 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1343 ---------------VNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDL--ESTQNRLRSLEDQHSTLQSDANKWRGE 1405
Cdd:PRK03918 439 pvcgrelteehrkelLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLkkESELIKLKELAEQLKELEEKLKKYNLE 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1406 -LDAALRENDILKSNNTNMETDLTRLKNRLKSAED---ALKELKNSLSHAKTEKERLQNAFREKT-KQADHLNQLASQFD 1480
Cdd:PRK03918 519 eLEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEElkkKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELE 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1481 T------KLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDEYQTTIDDlaHSHRVSEDSRLNAL 1554
Cdd:PRK03918 599 PfyneylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRL----EELRKELEELEKKYSE--EEYEELREEYLELS 672
|
490 500 510
....*....|....*....|....*....|
gi 1767287505 1555 QELEARKYEINDLTSRLDSTEQRLATLQQD 1584
Cdd:PRK03918 673 RELAGLRAELEELEKRREEIKKTLEKLKEE 702
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
321-1042 |
2.41e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 69.78 E-value: 2.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 321 IARLDEERRRSDEYRmQWENERQKSLSLEDENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQR 400
Cdd:PTZ00121 1156 IARKAEDARKAEEAR-KAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEE 1234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 401 VRKQFSDLKTHTEEDLDKQKAEFTRAiRNVNNISRNAAFSAgagdglglygledggdvnrttnnYEKVFIETIKRMNGTG 480
Cdd:PTZ00121 1235 AKKDAEEAKKAEEERNNEEIRKFEEA-RMAHFARRQAAIKA-----------------------EEARKADELKKAEEKK 1290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 481 GAGSASSAdllEELRKIRGGGSSEGDAELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGAlK 560
Cdd:PTZ00121 1291 KADEAKKA---EEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK-A 1366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 561 KLHEMAQDSEKnvdgtvsiKRTRSLSPGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAEsQVKEFLNKFENADEAR 640
Cdd:PTZ00121 1367 EAAEKKKEEAK--------KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKAD-EAKKKAEEKKKADEAK 1437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 641 RRldkqfADAKREISNLQKSVDE---AERNSRRTDDKLRASEAERVAAEKARKfledELAKLQASFQKSSTDDARKLRDE 717
Cdd:PTZ00121 1438 KK-----AEEAKKADEAKKKAEEakkAEEAKKKAEEAKKADEAKKKAEEAKKA----DEAKKKAEEAKKKADEAKKAAEA 1508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 718 MDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQirysdDIRRNIQKDLD 797
Cdd:PTZ00121 1509 KKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKA-----EEDKNMALRKA 1583
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 798 DLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRddyQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNN 877
Cdd:PTZ00121 1584 EEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEE---LKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK 1660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 878 DELDKLRQTISDYESQINLLRRHNDELDTTikghqgkithlENELHSRSGEIEKLNDLNQRLQKEKQDIlnQKLKLDGDV 957
Cdd:PTZ00121 1661 IKAAEEAKKAEEDKKKAEEAKKAEEDEKKA-----------AEALKKEAEEAKKAEELKKKEAEEKKKA--EELKKAEEE 1727
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 958 QALK-ETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQD--IRDLKERL 1034
Cdd:PTZ00121 1728 NKIKaEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDkkIKDIFDNF 1807
|
....*...
gi 1767287505 1035 ANIGKGGR 1042
Cdd:PTZ00121 1808 ANIIEGGK 1815
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1168-1597 |
2.49e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.30 E-value: 2.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1168 DLERRIRELEDEL-SQIgrgNDKTENDITELKRKHAAEIDKLKSDISALHDKHlsdlDDEKEQYGKAVENLKSVEDDlRD 1246
Cdd:PRK02224 180 RVLSDQRGSLDQLkAQI---EEKEEKDLHERLNGLESELAELDEEIERYEEQR----EQARETRDEADEVLEEHEER-RE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1247 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEiqkwKTDAYTVRSEAKALETTNTAL- 1325
Cdd:PRK02224 252 ELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLD----DADAEAVEARREELEDRDEELr 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1326 ------KAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDA 1399
Cdd:PRK02224 328 drleecRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDL 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1400 NKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELK--------------NSLSHAKTEKERL------- 1458
Cdd:PRK02224 408 GNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecgqpvegsphvETIEEDRERVEELeaeledl 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1459 ---QNAFREKTKQADHLNQLASQFDTKLTKLRN--ELQDTNDKLITSDTERNA-LRNELQKLSQELKFGNEQIQRKSDEY 1532
Cdd:PRK02224 488 eeeVEEVEERLERAEDLVEAEDRIERLEERREDleELIAERRETIEEKRERAEeLRERAAELEAEAEEKREAAAEAEEEA 567
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 1533 QTTIDDLA--HSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQdyiKADSERDILSD 1597
Cdd:PRK02224 568 EEAREEVAelNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAE---LNDERRERLAE 631
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
319-1033 |
2.51e-11 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 69.69 E-value: 2.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 319 EMIARLDEERRRSDEYRMQWENERQKSLSLEDENDRLRREFERYANDSKD----KEKTFINRERNLAQYLSDEQRKMLDL 394
Cdd:TIGR00606 238 EIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSElelkMEKVFQGTDEQLNDLYHNHQRTVREK 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 395 WTELQRVRKQFSDLKTHTEEdLDKQKAEFT--------RAIRNVNNISRNAAFSAGAGDGLGLYGLEDGGDVNRTTNNYE 466
Cdd:TIGR00606 318 ERELVDCQRELEKLNKERRL-LNQEKTELLveqgrlqlQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFH 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 467 KVFIEtikRMNGTGGAGSASSADLLEELR-------KIRGGGSSEGDA-ELHKELMTKYEESIERNIELESRGDDSQRKI 538
Cdd:TIGR00606 397 TLVIE---RQEDEAKTAAQLCADLQSKERlkqeqadEIRDEKKGLGRTiELKKEILEKKQEELKFVIKELQQLEGSSDRI 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 539 AELEAELRRNREKL--------------------NEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLSPGKTplppSEAL 598
Cdd:TIGR00606 474 LELDQELRKAERELskaeknsltetlkkevkslqNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKM----DKDE 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 599 RAVRNTFRNKDNDIQQLER--KLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLR 676
Cdd:TIGR00606 550 QIRKIKSRHSDELTSLLGYfpNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLF 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 677 ---ASEAERVAAEKARKFLEDELAKLQASFQKSSTDDA--RKLRDEMDEHTNSIQEEFKTR--IDELNRRVENLLREnnr 749
Cdd:TIGR00606 630 dvcGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQfiTQLTDENQSCCPVCQRVFQTEaeLQEFISDLQSKLRL--- 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 750 lksevnpLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQK------- 822
Cdd:TIGR00606 707 -------APDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETllgtimp 779
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 823 AAHLAEQQLKEIKIQRDDYQKQKDEHARHlfdirhkleteikGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHND 902
Cdd:TIGR00606 780 EEESAKVCLTDVTIMERFQMELKDVERKI-------------AQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIE 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 903 ELDTTIKGHQGKITHLE---NELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENK 979
Cdd:TIGR00606 847 LNRKLIQDQQEQIQHLKsktNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKE 926
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 980 ELVGKEARARDAANQqlsranllnkELEDTKQDLKHSTDVNKQLEQDIRDLKER 1033
Cdd:TIGR00606 927 ELISSKETSNKKAQD----------KVNDIKEKVKNIHGYMKDIENKIQDGKDD 970
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
511-1024 |
2.62e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 69.38 E-value: 2.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 511 KELMTKYEESIErniELESrgddsQRKIAELE-AELRRNREKLNEAQGALK-KLHEMAQDSEKNvDGTVSIKRTRSLSPG 588
Cdd:pfam15921 334 REAKRMYEDKIE---ELEK-----QLVLANSElTEARTERDQFSQESGNLDdQLQKLLADLHKR-EKELSLEKEQNKRLW 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 589 KTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAES----QVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEA 664
Cdd:pfam15921 405 DRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSecqgQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEEL 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 665 E------RNSRRT--------DDKLRASEAERVAAEKARKFLEDELAKLQasFQKSSTDDARKLRDEMDEHTNSIQEEFK 730
Cdd:pfam15921 485 TakkmtlESSERTvsdltaslQEKERAIEATNAEITKLRSRVDLKLQELQ--HLKNEGDHLRNVQTECEALKLQMAEKDK 562
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 731 TrIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNStqRRIEEKETQI--RYSDDIRRNIQKDLDDLR-EKYDRVH 807
Cdd:pfam15921 563 V-IEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEIND--RRLELQEFKIlkDKKDAKIRELEARVSDLElEKVKLVN 639
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 808 TDNEKILGELEHAQKAahlaEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTI 887
Cdd:pfam15921 640 AGSERLRAVKDIKQER----DQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTL 715
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 888 SDYESQinllrrhNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKL 967
Cdd:pfam15921 716 KSMEGS-------DGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 968 ENELEKLRNENKELVGKEAR---ARDAANQQLSRAN--LLNKELEDTKQDLKHSTDVnKQLE 1024
Cdd:pfam15921 789 AGELEVLRSQERRLKEKVANmevALDKASLQFAECQdiIQRQEQESVRLKLQHTLDV-KELQ 849
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
831-1341 |
2.87e-11 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 69.03 E-value: 2.87e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 831 LKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKG 910
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 911 HQgkithLENELHSRSgeiEKLNDLNQRLQKEKQDILnqklkldgDVQALKETIRKLENELEKLRNE-NKELVGKEARAR 989
Cdd:COG4717 128 LP-----LYQELEALE---AELAELPERLEELEERLE--------ELRELEEELEELEAELAELQEElEELLEQLSLATE 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 990 DAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGA----FGDRSSVADP 1065
Cdd:COG4717 192 EELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAAllalLGLGGSLLSL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1066 SRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRdgrdagnrgthtitntkERIERIE-KNILDRYHDDELV 1144
Cdd:COG4717 272 ILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPAL-----------------EELEEEElEELLAALGLPPDL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1145 EHKIREVNDRWKRELERLENEKDDLERRIR--ELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALHDKhLSD 1222
Cdd:COG4717 335 SPEELLELLDRIEELQELLREAEELEEELQleELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQ-LEE 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1223 LDDEKEQYGKAVEnlksvEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQN--QKIKDEWDDFRNDADKE 1300
Cdd:COG4717 414 LLGELEELLEALD-----EEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGelAELLQELEELKAELREL 488
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 1767287505 1301 IQKWKTDAYTVRSEAKALE-TTNTALKAQLQAANDRIDHLTK 1341
Cdd:COG4717 489 AEEWAALKLALELLEEAREeYREERLPPVLERASEYFSRLTD 530
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
508-1527 |
6.84e-11 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 68.28 E-value: 6.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 508 ELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRN---REKLN----EAQGALKKLHE---MAQDSEKNVDGTV 577
Cdd:pfam01576 75 EILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEeaaRQKLQlekvTTEAKIKKLEEdilLLEDQNSKLSKER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 578 SIKRTRsLSPGKTPLPPSEALRAVRNTFRNK-DNDIQQLERKLKIAESQVKEFlnkfenaDEARRRLDKQFADAKREISN 656
Cdd:pfam01576 155 KLLEER-ISEFTSNLAEEEEKAKSLSKLKNKhEAMISDLEERLKKEEKGRQEL-------EKAKRKLEGESTDLQEQIAE 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 657 LQKSVDEAERNSRRTDDKLRA-------SEAERVAAEKARKFLEDELAKLQASF--QKSSTDDARKLRDEMDEHTNSIQE 727
Cdd:pfam01576 227 LQAQIAELRAQLAKKEEELQAalarleeETAQKNNALKKIRELEAQISELQEDLesERAARNKAEKQRRDLGEELEALKT 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 728 EFKTRID------ELNRRVENLLRENNR-LKSEVNPLKDKYRDLENEYNSTqrrIEEKETQIRYSDDIRRNIQKDLDDLR 800
Cdd:pfam01576 307 ELEDTLDttaaqqELRSKREQEVTELKKaLEEETRSHEAQLQEMRQKHTQA---LEELTEQLEQAKRNKANLEKAKQALE 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 801 EKYDRVHTDNEKILG---ELEHAQKAahlAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNN 877
Cdd:pfam01576 384 SENAELQAELRTLQQakqDSEHKRKK---LEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLS 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 878 DELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSrsgEIEKLNDLNQRLQKEKQDILNQKLKLDGD- 956
Cdd:pfam01576 461 KDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEE---EEEAKRNVERQLSTLQAQLSDMKKKLEEDa 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 957 --VQALKETIRKLENELEKLRNENKElvgkearaRDAANQQLSRA-NLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKER 1033
Cdd:pfam01576 538 gtLEALEEGKKRLQRELEALTQQLEE--------KAAAYDKLEKTkNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQM 609
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1034 LANigkggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpaAEDIESRGGGEIDipssgdvihgRDGRDGRDAG 1113
Cdd:pfam01576 610 LAE--------------------------------------------EKAISARYAEERD----------RAEAEAREKE 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1114 NRG---THTITNTKERIERIEK-NILDRYHDDELVEHKirevNDRWK--RELER----LENEKDDLERRIRELEDELSQI 1183
Cdd:pfam01576 636 TRAlslARALEEALEAKEELERtNKQLRAEMEDLVSSK----DDVGKnvHELERskraLEQQVEEMKTQLEELEDELQAT 711
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1184 GRGNDKTENDITELKRKHAAEI--------DKLKSDISALHDkHLSDLDDEKEQYGKAVENLKSVEDDLRDklnnLEKQL 1255
Cdd:pfam01576 712 EDAKLRLEVNMQALKAQFERDLqardeqgeEKRRQLVKQVRE-LEAELEDERKQRAQAVAAKKKLELDLKE----LEAQI 786
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1256 -ADSLNRENELEREKRdydekinsLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRS-EAKAL---ETTNTALKAQLQ 1330
Cdd:pfam01576 787 dAANKGREEAVKQLKK--------LQAQMKDLQRELEEARASRDEILAQSKESEKKLKNlEAELLqlqEDLAASERARRQ 858
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1331 AANDRiDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQ-------SDANKWR 1403
Cdd:pfam01576 859 AQQER-DELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTtelaaerSTSQKSE 937
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1404 GELDAALRENDILKSNNTNME-TDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTK-------QADHLNQL 1475
Cdd:pfam01576 938 SARQQLERQNKELKAKLQEMEgTVKSKFKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKklkevllQVEDERRH 1017
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1476 ASQFDTKLTKLRNELQDTNDKLITSDTER---NALRNELQKLSQELKFGNEQIQR 1527
Cdd:pfam01576 1018 ADQYKDQAEKGNSRMKQLKRQLEEAEEEAsraNAARRKLQRELDDATESNESMNR 1072
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
712-1531 |
7.76e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 68.07 E-value: 7.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 712 RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRI---EEKETQirySDDI 788
Cdd:pfam02463 197 LQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIekeEEKLAQ---VLKE 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 789 RRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRddyQKQKDEHARHLFDIRHKLETEIKGRQD 868
Cdd:pfam02463 274 NKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEK---KKAEKELKKEKEEIEELEKELKELEIK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 869 LEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILN 948
Cdd:pfam02463 351 REAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELE 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 949 QKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTdVNKQLEQDIR 1028
Cdd:pfam02463 431 ILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERS-QKESKARSGL 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1029 DLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADpsRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDgRD 1108
Cdd:pfam02463 510 KVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAI--STAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLI-PK 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1109 GRDAGNRGTHTITNTKERIERIEKNILDRyhDDELVEHKIREVNDRWKRELERLENEKdDLERRIRELEDELSQIGRGND 1188
Cdd:pfam02463 587 LKLPLKSIAVLEIDPILNLAQLDKATLEA--DEDDKRAKVVEGILKDTELTKLKESAK-AKESGLRKGVSLEEGLAEKSE 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1189 KTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELERE 1268
Cdd:pfam02463 664 VKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQ 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1269 KRD-----YDEKIN-SLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANdridhltkt 1342
Cdd:pfam02463 744 KIDeeeeeEEKSRLkKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEA--------- 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1343 vndhtskvrdltsqvrhLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENdilksnntn 1422
Cdd:pfam02463 815 -----------------ELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEEL--------- 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1423 metdltRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDT 1502
Cdd:pfam02463 869 ------LQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLL 942
|
810 820
....*....|....*....|....*....
gi 1767287505 1503 ERNALRNELQKLSQELKFGNEQIQRKSDE 1531
Cdd:pfam02463 943 EEADEKEKEENNKEEEEERNKRLLLAKEE 971
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1120-1592 |
9.35e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.40 E-value: 9.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1120 ITNTKERIERIEKNIldryHDDELVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGN---DKTENDITE 1196
Cdd:PRK03918 171 IKEIKRRIERLEKFI----KRTENIEELIKEK----EKELEEVLREINEISSELPELREELEKLEKEVkelEELKEEIEE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1197 LKRKHAA---EIDKLKSDISALHD------KHLSDLDD------EKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNR 1261
Cdd:PRK03918 243 LEKELESlegSKRKLEEKIRELEErieelkKEIEELEEkvkelkELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1262 ENELEREKRDYDEK---INSLYGQNQKIKDEWDDFRNDADK--EIQKWKTDAYTVRSEAKALETTNtaLKAQLQAANDRI 1336
Cdd:PRK03918 323 INGIEERIKELEEKeerLEELKKKLKELEKRLEELEERHELyeEAKAKKEELERLKKRLTGLTPEK--LEKELEELEKAK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1337 DHLTKTVNDHTSKVRDLTSQVRHLED---ELADTKGN--LVQKEMDLEstqNRLRSLEDQHSTLqSDANKWRGELDAALR 1411
Cdd:PRK03918 401 EEIEEEISKITARIGELKKEIKELKKaieELKKAKGKcpVCGRELTEE---HRKELLEEYTAEL-KRIEKELKEIEEKER 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1412 EndiLKSNNTNMETDLTRLKN--RLKSAEDALKELKNSLShaKTEKERLQNAFREKTKQADHLNQLASQFDT------KL 1483
Cdd:PRK03918 477 K---LRKELRELEKVLKKESEliKLKELAEQLKELEEKLK--KYNLEELEKKAEEYEKLKEKLIKLKGEIKSlkkeleKL 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1484 TKLRNELQDTNDKLITSDTERNALRNELQKLSQE-LKFGNEQIQRKSDEYQTTID--DLAHSHRVSEDSRLNALQELEAR 1560
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLKELEELGFEsVEELEERLKELEPFYNEYLElkDAEKELEREEKELKKLEEELDKA 631
|
490 500 510
....*....|....*....|....*....|..
gi 1767287505 1561 KYEINDLTSRLDSTEQRLATLQQDYIKADSER 1592
Cdd:PRK03918 632 FEELAETEKRLEELRKELEELEKKYSEEEYEE 663
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1124-1424 |
1.00e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 1.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1124 KERIERIEKNIldRYHDDELVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELK---RK 1200
Cdd:COG1196 219 KEELKELEAEL--LLLKLRELEAELEEL----EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQaeeYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1201 HAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLY 1280
Cdd:COG1196 293 LLAELARLEQDIARLEER-RRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1281 GQNQKIKDEWDDFRNDADKEIQkwktdaytvrsEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHL 1360
Cdd:COG1196 372 AELAEAEEELEELAEELLEALR-----------AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 1361 EDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNME 1424
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYE 504
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1315-1519 |
1.02e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.94 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1315 AKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHST 1394
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1395 LQSDANKWRGELDAALRE----------NDILKSNNTN--------METDLTRLKNRLKSAEDALKELKNSLSHAKTEKE 1456
Cdd:COG4942 95 LRAELEAQKEELAELLRAlyrlgrqpplALLLSPEDFLdavrrlqyLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 1457 RLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELK 1519
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1802-2207 |
1.10e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 67.35 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1802 KTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfQLETK 1881
Cdd:TIGR04523 25 KNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLK-------KNKDK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1882 MRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIdiqSKTSHE 1961
Cdd:TIGR04523 98 INKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQK---EELENE 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1962 YQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQ---RVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKV 2038
Cdd:TIGR04523 175 LNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSlesQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQ 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2039 VNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRN-SSQLSDGWKKEKITLL----KKIELLENEKRRTD 2113
Cdd:TIGR04523 255 LNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlNNQKEQDWNKELKSELknqeKKLEEIQNQISQNN 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2114 AAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTN--KQREEQERQLIRMRQEKGQIEKVI 2191
Cdd:TIGR04523 335 KIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNleSQINDLESKIQNQEKLNQQKDEQI 414
|
410
....*....|....*.
gi 1767287505 2192 ENRERTHRNRIKQLED 2207
Cdd:TIGR04523 415 KKLQQEKELLEKEIER 430
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
610-1582 |
1.24e-10 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 67.38 E-value: 1.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 610 NDIQQLERKLKIAESQVKEFLNKFEnadEARRRLDKQFADAKREISNLQKSVDEAERNSrrTDDKLRASEAERVAAEKAR 689
Cdd:TIGR01612 1111 DEINKIKDDIKNLDQKIDHHIKALE---EIKKKSENYIDEIKAQINDLEDVADKAISND--DPEEIEKKIENIVTKIDKK 1185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 690 KFLEDELAKLQASFQKSSTDDA--RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENE 767
Cdd:TIGR01612 1186 KNIYDEIKKLLNEIAEIEKDKTslEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENE 1265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 768 YNSTQRRIEEKET-QIRYSDD-----IRRNIQKDLDDLREKYDRVHTDNEK------ILGELE----HAQKAAHLAEQQL 831
Cdd:TIGR01612 1266 MGIEMDIKAEMETfNISHDDDkdhhiISKKHDENISDIREKSLKIIEDFSEesdindIKKELQknllDAQKHNSDINLYL 1345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 832 KEIKiqrDDYQKQKDEHARHLFDIRHKLETEIkgrqdlEKNGARNNDELDKLRQTISDYESQINlLRRHNDELDTTIKGH 911
Cdd:TIGR01612 1346 NEIA---NIYNILKLNKIKKIIDEVKEYTKEI------EENNKNIKDELDKSEKLIKKIKDDIN-LEECKSKIESTLDDK 1415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 912 Q-----GKITHLENELHSRSG---------------------EIEKLNDLNQRLQKEKQDilNQKLKLDGDVQALKETIR 965
Cdd:TIGR01612 1416 DideciKKIKELKNHILSEESnidtyfknadennenvlllfkNIEMADNKSQHILKIKKD--NATNDHDFNINELKEHID 1493
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 966 KlENELEKLRNENKELVGKEARARDAANQQLSRanLLNKELE-DTKQDLKHSTDVNKQLEQDIRDLKERL-----ANIGK 1039
Cdd:TIGR01612 1494 K-SKGCKDEADKNAKAIEKNKELFEQYKKDVTE--LLNKYSAlAIKNKFAKTKKDSEIIIKEIKDAHKKFileaeKSEQK 1570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1040 GGRISRDSTTGTDGGAFGDRSSVAdpsrtrgaagstvfvpaaediesrgggEIDIPSSGDVIHGRdgrdgrdagnrgTHT 1119
Cdd:TIGR01612 1571 IKEIKKEKFRIEDDAAKNDKSNKA---------------------------AIDIQLSLENFENK------------FLK 1611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1120 ITNTKERI-------ERIEKNILDRYHDDELVEHKIREVNDRWKRE-LERLENEKDDLERRIRELEDELSQIgrgnDKTE 1191
Cdd:TIGR01612 1612 ISDIKKKIndclketESIEKKISSFSIDSQDTELKENGDNLNSLQEfLESLKDQKKNIEDKKKELDELDSEI----EKIE 1687
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1192 NDITELKRKHAAEI-DKLKSDISALHDKhlsdLDDEKEQYGKAVENLKSVED-------DLRDKLNNLEKQLADSLNREN 1263
Cdd:TIGR01612 1688 IDVDQHKKNYEIGIiEKIKEIAIANKEE----IESIKELIEPTIENLISSFNtndlegiDPNEKLEEYNTEIGDIYEEFI 1763
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1264 ELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQ-KWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKT 1342
Cdd:TIGR01612 1764 ELYNIIAGCLETVSKEPITYDEIKNTRINAQNEFLKIIEiEKKSKSYLDDIEAKEFDRIINHFKKKLDHVNDKFTKEYSK 1843
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1343 VNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALREN--------- 1413
Cdd:TIGR01612 1844 INEGFDDISKSIENVKNSTDENLLFDILNKTKDAYAGIIGKKYYSYKDEAEKIFINISKLANSINIQIQNNsgidlfdni 1923
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1414 --DILKSNNTNMETDLTRLKNRLKSAE----------DALKELKNSLSHAKTEKERLQNAFR-----EKTKQADHLNQLA 1476
Cdd:TIGR01612 1924 niAILSSLDSEKEDTLKFIPSPEKEPEiytkirdsydTLLDIFKKSQDLHKKEQDTLNIIFEnqqlyEKIQASNELKDTL 2003
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1477 SQFDTKLTKLRNELQdtndKLITSDTERNALRNELQKLSQELKFGN-EQIQRKSDEYQTTIDDLAHSHRVS--EDSRLNA 1553
Cdd:TIGR01612 2004 SDLKYKKEKILNDVK----LLLHKFDELNKLSCDSQNYDTILELSKqDKIKEKIDNYEKEKEKFGIDFDVKamEEKFDND 2079
|
1050 1060 1070
....*....|....*....|....*....|..
gi 1767287505 1554 LQELEarKYEINDLTSRL---DSTEQRLATLQ 1582
Cdd:TIGR01612 2080 IKDIE--KFENNYKHSEKdnhDFSEEKDNIIQ 2109
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1124-1955 |
1.35e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.07 E-value: 1.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1124 KERIERIekniLDRY-HDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELE---DELSQIGRGNDKTENDITELKR 1199
Cdd:pfam15921 73 KEHIERV----LEEYsHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQmerDAMADIRRRESQSQEDLRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1200 KHAAEIDKLKSdisaLHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELErekrdyDEKINSL 1279
Cdd:pfam15921 149 NTVHELEAAKC----LKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMS------TMHFRSL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1280 YGQNQKIKDEwddfrndADKEIQKWKTDAYTVRSEAKALET-TNTALKAQLQAANDRIDHL-----------TKTVNDHT 1347
Cdd:pfam15921 219 GSAISKILRE-------LDTEISYLKGRIFPVEDQLEALKSeSQNKIELLLQQHQDRIEQLiseheveitglTEKASSAR 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1348 SKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRS--------LEDQHSTLQSDANKWRGELDAALRENDILKSN 1419
Cdd:pfam15921 292 SQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSelreakrmYEDKIEELEKQLVLANSELTEARTERDQFSQE 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1420 NTNMETDLTRLKNRLKSAEdalkelkNSLSHAKTEKERLQNAFREKTKQADHL-------NQLASQFDTKLTKLRNELQD 1492
Cdd:pfam15921 372 SGNLDDQLQKLLADLHKRE-------KELSLEKEQNKRLWDRDTGNSITIDHLrrelddrNMEVQRLEALLKAMKSECQG 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1493 TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDsRLNALQE----LEARKYEINDLT 1568
Cdd:pfam15921 445 QMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSD-LTASLQEkeraIEATNAEITKLR 523
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1569 SRLDSTEQRLATLQQDyikADSERDILS--DALRRFQSSANRVINFhtfvdggagYVDGVPGGTSVIggGPSAQRSGAYD 1646
Cdd:pfam15921 524 SRVDLKLQELQHLKNE---GDHLRNVQTecEALKLQMAEKDKVIEI---------LRQQIENMTQLV--GQHGRTAGAMQ 589
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1647 PSSGGVIGSGISGGPGGSDFgrEIEIGRGDSDQSDVAYPRSvpfppsaDFSSGRPGAASAGGRVINNldgtttvnmnggf 1726
Cdd:pfam15921 590 VEKAQLEKEINDRRLELQEF--KILKDKKDAKIRELEARVS-------DLELEKVKLVNAGSERLRA------------- 647
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1727 dIANLEGTLQSLLNKIEKLEMERNELRDtlarmkkkttethttinQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1806
Cdd:pfam15921 648 -VKDIKQERDQLLNEVKTSRNELNSLSE-----------------DYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1807 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfQLETKMRESD 1886
Cdd:pfam15921 710 QTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKN-------KLSQELSTVA 782
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 1887 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKlrrdlTKAESVENELRKTIDIQ 1955
Cdd:pfam15921 783 TEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQR-----QEQESVRLKLQHTLDVK 846
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1732-2217 |
1.97e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 66.20 E-value: 1.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1732 EGTLQSLLNKIEKLEMERNELRDTLarmkkktTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAktllrsqEEA 1811
Cdd:TIGR04523 67 EEKINNSNNKIKILEQQIKDLNDKL-------KKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKL-------EKQ 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1812 LKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKM---RESDSD 1888
Cdd:TIGR04523 133 KKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLsnlKKKIQK 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1889 TNKYQLQIASFESERQILTEKIKELdgalrlsdskvqdmkddTDKLRRDLTKAESVENELRKTIDIQSKTsheyqllKDQ 1968
Cdd:TIGR04523 213 NKSLESQISELKKQNNQLKDNIEKK-----------------QQEINEKTTEISNTQTQLNQLKDEQNKI-------KKQ 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1969 LLNTQNELNGANNRKQQLENELLNVRSEVRDYKQR------------VHDVNNRVSELQRQLQDANTEKNRVEDRFLSVE 2036
Cdd:TIGR04523 269 LSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQkeqdwnkelkseLKNQEKKLEEIQNQISQNNKIISQLNEQISQLK 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2037 KVVNTMRTTETDLRQQL-------ETAKNEKRVATKELEDLKRRLAQLENERRNSSQLS-------DGWKKEKITLLKKI 2102
Cdd:TIGR04523 349 KELTNSESENSEKQRELeekqneiEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNqqkdeqiKKLQQEKELLEKEI 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2103 ELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNcaqlqQQIAQLEMENGNRILELTNKQREEQERQLIRMRQ 2182
Cdd:TIGR04523 429 ERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQ-----LKVLSRSINKIKQNLEQKQKELKSKEKELKKLNE 503
|
490 500 510
....*....|....*....|....*....|....*...
gi 1767287505 2183 EKGQIE---KVIENRERTHRNRIKQLEDQIAILRDQLD 2217
Cdd:TIGR04523 504 EKKELEekvKDLTKKISSLKEKIEKLESEKKEKESKIS 541
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
491-972 |
2.04e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.63 E-value: 2.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 491 LEELRKIRGGGSS-EGDAELHKELMTKYEESIE--RNIE-----LESRGDDSQRKIAELEAELRRNREKLNEAQGALKKL 562
Cdd:PRK03918 275 IEELEEKVKELKElKEKAEEYIKLSEFYEEYLDelREIEkrlsrLEEEINGIEERIKELEEKEERLEELKKKLKELEKRL 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 563 HEMAQDSEKNVDGTVSIKRTRSLSPGKTPLPPSEalravrntfrnkdndiqqLERKLKIAESQVKEFLNKFENADEARRR 642
Cdd:PRK03918 355 EELEERHELYEEAKAKKEELERLKKRLTGLTPEK------------------LEKELEELEKAKEEIEEEISKITARIGE 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 643 LDKQFADAKREISNLQKS----------VDEAERNS--RRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDD 710
Cdd:PRK03918 417 LKKEIKELKKAIEELKKAkgkcpvcgreLTEEHRKEllEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELI 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 711 A-RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLEnEYNSTQRRIEEKEtqirysDDIR 789
Cdd:PRK03918 497 KlKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE-ELKKKLAELEKKL------DELE 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 790 RNIQKDLDDLREKYDRVHTDNEKILGELE-------HAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRhKLETE 862
Cdd:PRK03918 570 EELAELLKELEELGFESVEELEERLKELEpfyneylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLE-ELRKE 648
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 863 IK--GRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKghqgkitHLENELHSRSGEIEKLNDLNQRLQ 940
Cdd:PRK03918 649 LEelEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLE-------KLKEELEEREKAKKELEKLEKALE 721
|
490 500 510
....*....|....*....|....*....|..
gi 1767287505 941 kekqdilnqklkldgDVQALKETIRKLENELE 972
Cdd:PRK03918 722 ---------------RVEELREKVKKYKALLK 738
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
1158-1610 |
3.16e-10 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 65.48 E-value: 3.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1158 ELERLENEKDDLERRIRELEDELSQigrgndktendITELKRKHAAEIDKLKSDISALHD---------KHLSDLDDEKE 1228
Cdd:pfam05622 1 DLSEAQEEKDELAQRCHELDQQVSL-----------LQEEKNSLQQENKKLQERLDQLESgddsgtpggKKYLLLQKQLE 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1229 QYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELErekrdydekinSLYGQNQKIKDEWDDFRNDADKeIQKWKTda 1308
Cdd:pfam05622 70 QLQEENFRLETARDDYRIKCEELEKEVLELQHRNEELT-----------SLAEEAQALKDEMDILRESSDK-VKKLEA-- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1309 yTVRSEAKALETTNTaLKAQLQAANDR-IDHLTKTVN--DHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRL 1385
Cdd:pfam05622 136 -TVETYKKKLEDLGD-LRRQVKLLEERnAEYMQRTLQleEELKKANALRGQLETYKRQVQELHGKLSEESKKADKLEFEY 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1386 RSLEDQHSTLQSDANKWRGELDaALREndilksnnTNMETDLTRLKNRLKSAEDALKElKNSLSHAKTEKERLQNAFREK 1465
Cdd:pfam05622 214 KKLEEKLEALQKEKERLIIERD-TLRE--------TNEELRCAQLQQAELSQADALLS-PSSDPGDNLAAEIMPAEIREK 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1466 TKQADHLNQL-----ASQFDTKLTKLRNELQDTNDKLITSDTErnaLRNELQKLSqELKFGNEQIQRKSDEYQTTIDDLA 1540
Cdd:pfam05622 284 LIRLQHENKMlrlgqEGSYRERLTELQQLLEDANRRKNELETQ---NRLANQRIL-ELQQQVEELQKALQEQGSKAEDSS 359
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 1541 HSHRVSE---DSRLNALQELEARKYEINDLTSRLDS-TEQRLATLQQDYIKADSERDILSDALRRFQSSANRVI 1610
Cdd:pfam05622 360 LLKQKLEehlEKLHEAQSELQKKKEQIEELEPKQDSnLAQKIDELQEALRKKDEDMKAMEERYKKYVEKAKSVI 433
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1732-2137 |
4.85e-10 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 64.79 E-value: 4.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1732 EGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKET--RYRNIEDNLQDAEEERRALESRLQSAKTLLRSQE 1809
Cdd:COG4717 87 EEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqELEALEAELAELPERLEELEERLEELRELEEELE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1810 EALKQRDEERRQMKSKMVAAELQargKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDT 1889
Cdd:COG4717 167 ELEAELAELQEELEELLEQLSLA---TEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEE 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1890 NKYQLQ--------IASFESERQILTEKIKELDGAL---------------RLSDSKVQDMKDDTDKLRRDLTKAESVEN 1946
Cdd:COG4717 244 RLKEARlllliaaaLLALLGLGGSLLSLILTIAGVLflvlgllallflllaREKASLGKEAEELQALPALEELEEEELEE 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1947 ELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE--------NELLN---------VRSEVRDYKQRvHDVNN 2009
Cdd:COG4717 324 LLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQleeleqeiAALLAeagvedeeeLRAALEQAEEY-QELKE 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2010 RVSELQRQLQDANTEKNRVEDRFlsvekvvntmrtTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRnssQLSD 2089
Cdd:COG4717 403 ELEELEEQLEELLGELEELLEAL------------DEEELEEELEELEEELEELEEELEELREELAELEAELE---QLEE 467
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1767287505 2090 GWKKEKitLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMEREN 2137
Cdd:COG4717 468 DGELAE--LLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
598-1037 |
6.13e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 65.06 E-value: 6.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 598 LRAVRNTFRNKDNDIQQLERK--------LKIAESQVKEFLNKFE-NADEARRRLDK-------------QFADAKREIS 655
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKdlherlngLESELAELDEEIERYEeQREQARETRDEadevleeheerreELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 656 NLQKSVDEAERnsRRTDDKLRASEAERVAAEkarkfLEDELAKLQAS--FQKSSTDDARKLRDEMDEHTNSIQ---EEFK 730
Cdd:PRK02224 262 DLRETIAETER--EREELAEEVRDLRERLEE-----LEEERDDLLAEagLDDADAEAVEARREELEDRDEELRdrlEECR 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 731 TRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIR--------------YSDDIRRNIQKDL 796
Cdd:PRK02224 335 VAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEeleeeieelrerfgDAPVDLGNAEDFL 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 797 DDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQR--------------DDYQKQKDEHARHLFDIR---HKL 859
Cdd:PRK02224 415 EELREERDELREREAELEATLRTARERVEEAEALLEAGKCPEcgqpvegsphvetiEEDRERVEELEAELEDLEeevEEV 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 860 ETEI----------KGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKIThlenELHSRSGEI 929
Cdd:PRK02224 495 EERLeraedlveaeDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAA----EAEEEAEEA 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 930 -EKLNDLNQRLQKekqdiLNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKE--- 1005
Cdd:PRK02224 571 rEEVAELNSKLAE-----LKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEfde 645
|
490 500 510
....*....|....*....|....*....|....
gi 1767287505 1006 --LEDTKQDLKHSTDVNKQLEQDIRDLKERLANI 1037
Cdd:PRK02224 646 arIEEAREDKERAEEYLEQVEEKLDELREERDDL 679
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
610-824 |
7.32e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 63.63 E-value: 7.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 610 NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKAR 689
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 690 KFLEDELAKLQASFQKSSTDDARKLR---------DEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDK 760
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLlspedfldaVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 761 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAA 824
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1727-2216 |
7.53e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.69 E-value: 7.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1727 DIANLEGTLQSLLNKIEKLEME-------RNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQ 1799
Cdd:TIGR02168 282 EIEELQKELYALANEISRLEQQkqilrerLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1800 SAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfqlE 1879
Cdd:TIGR02168 362 ELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE---------E 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1880 TKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKtidiqskts 1959
Cdd:TIGR02168 433 AELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG--------- 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1960 heYQLLKDQLLNTQNELNGANNRKQQL-------ENELLNVRSEVRDY---------KQRV-HDVNNRV---------SE 2013
Cdd:TIGR02168 504 --FSEGVKALLKNQSGLSGILGVLSELisvdegyEAAIEAALGGRLQAvvvenlnaaKKAIaFLKQNELgrvtflpldSI 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2014 LQRQLQDANTEKNRVEDRFLSV-----------EKVVNTMRTT---ETDLRQQLETAKNEK---RVATKELEDLKRRLAQ 2076
Cdd:TIGR02168 582 KGTEIQGNDREILKNIEGFLGVakdlvkfdpklRKALSYLLGGvlvVDDLDNALELAKKLRpgyRIVTLDGDLVRPGGVI 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2077 L-ENERRNSSQLSDgwKKEKITLLKKIELLENEKRRTDAAIRETALQREAIE-------KSLNAMERENKELYKNCAQLQ 2148
Cdd:TIGR02168 662 TgGSAKTNSSILER--RREIEELEEKIEELEEKIAELEKALAELRKELEELEeeleqlrKELEELSRQISALRKDLARLE 739
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 2149 QQIAQLEMENGNRILELTN--KQREEQERQLIRMRQEKGQIEKVIENRER---THRNRIKQLEDQIAILRDQL 2216
Cdd:TIGR02168 740 AEVEQLEERIAQLSKELTEleAEIEELEERLEEAEEELAEAEAEIEELEAqieQLKEELKALREALDELRAEL 812
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
531-799 |
7.76e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.55 E-value: 7.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 531 GDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDgtvSIKRTRSLSPGKTPLPPSEA----LRAVRNTFR 606
Cdd:COG4913 605 GFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERRE---ALQRLAEYSWDEIDVASAEReiaeLEAELERLD 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 607 NKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTD----DKLRASEAER 682
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELrallEERFAAALGD 761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 683 VAAEKARKFLEDELAKLQASFQKSstddARKLRDEMDEHtnsiQEEFKTRIDELNRRVENL---LRENNRLKSEVNP-LK 758
Cdd:COG4913 762 AVERELRENLEERIDALRARLNRA----EEELERAMRAF----NREWPAETADLDADLESLpeyLALLDRLEEDGLPeYE 833
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1767287505 759 DKYRDLENEynSTQRRIEEKETQIRYSddiRRNIQKDLDDL 799
Cdd:COG4913 834 ERFKELLNE--NSIEFVADLLSKLRRA---IREIKERIDPL 869
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
526-1039 |
8.43e-10 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 64.54 E-value: 8.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 526 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEK-NVDGTVSIKRTRSLSPGKTPLPPSE-------- 596
Cdd:PRK01156 208 DDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRyESEIKTAESDLSMELEKNNYYKELEerhmkiin 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 597 -ALRAVRNTFRNKDNDIQQLERKLKIAESqVKEFLNKFENADEARRRLDK---QFADAKREISNLQKSVDEAERNSRRTD 672
Cdd:PRK01156 288 dPVYKNRNYINDYFKYKNDIENKKQILSN-IDAEINKYHAIIKKLSVLQKdynDYIKKKSRYDDLNNQILELEGYEMDYN 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 673 DKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDdARKLRDEMDEHTNSIQEeFKTRIDELNRRVENLLRENNRLKS 752
Cdd:PRK01156 367 SYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEID-PDAIKKELNEINVKLQD-ISSKVSSLNQRIRALRENLDELSR 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 753 EVNPLK--------------DKYRDLENEYNSTQRRIEEK----ETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKIL 814
Cdd:PRK01156 445 NMEMLNgqsvcpvcgttlgeEKSNHIINHYNEKKSRLEEKireiEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKI 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 815 GELEHAQKAAhlaEQQLKEIKIQRDDYQKQKDEH-ARHLFDIRHKLETEIKGrqdlekNGARNNDELDKLRQTISDYESQ 893
Cdd:PRK01156 525 ESARADLEDI---KIKINELKDKHDKYEEIKNRYkSLKLEDLDSKRTSWLNA------LAVISLIDIETNRSRSNEIKKQ 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 894 INLLRRHNDELDTTIKghqgkithlenelhsrsgEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEK 973
Cdd:PRK01156 596 LNDLESRLQEIEIGFP------------------DDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKK 657
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 974 LRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1039
Cdd:PRK01156 658 QIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINE 723
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1794-2216 |
1.47e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 63.91 E-value: 1.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1794 LESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRslrDKEEQWDS 1873
Cdd:TIGR00606 700 LQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIE---EQETLLGT 776
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1874 SRFQLETKMRESDSDTNKYQLQIASFESERQIlTEKIKELDGA-LRLSDSKVQDMKDDTD-KLRRDLTKAEsvenELRKT 1951
Cdd:TIGR00606 777 IMPEEESAKVCLTDVTIMERFQMELKDVERKI-AQQAAKLQGSdLDRTVQQVNQEKQEKQhELDTVVSKIE----LNRKL 851
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1952 IDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKnrvedr 2031
Cdd:TIGR00606 852 IQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEK------ 925
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2032 flsvEKVVNTMRTtetdlrqqletaknEKRVATKELEDLKRRLAQLENERRN-SSQLSDGWKKEKITllkkielLENEKR 2110
Cdd:TIGR00606 926 ----EELISSKET--------------SNKKAQDKVNDIKEKVKNIHGYMKDiENKIQDGKDDYLKQ-------KETELN 980
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2111 RTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQ--ERQLIRMRQEKGQIE 2188
Cdd:TIGR00606 981 TVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEmgQMQVLQMKQEHQKLE 1060
|
410 420 430
....*....|....*....|....*....|.
gi 1767287505 2189 KVIENRERTHR---NRIKQLEDQIAILRDQL 2216
Cdd:TIGR00606 1061 ENIDLIKRNHVlalGRQKGYEKEIKHFKKEL 1091
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
776-1580 |
1.54e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.78 E-value: 1.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 776 EEKETQirysDDIRRnIQKDLDDLREKYDRVHTDNEKI--LGEL-EHAQKAAHlAEQQLKEIKIQRDDYQKQKDEHARHL 852
Cdd:COG4913 219 EEPDTF----EAADA-LVEHFDDLERAHEALEDAREQIelLEPIrELAERYAA-ARERLAELEYLRAALRLWFAQRRLEL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 853 fdirhkLETEIkgrqdlekngARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQG-KITHLENELhsrsgeiek 931
Cdd:COG4913 293 ------LEAEL----------EELRAELARLEAELERLEARLDALREELDELEAQIRGNGGdRLEQLEREI--------- 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 932 lndlnQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANllnKELEDTKQ 1011
Cdd:COG4913 348 -----ERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAE---AALRDLRR 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1012 DLKhstdvnkQLEQDIRDLKERLANIGKGGRISRDsttgtdggafgdrssvadpsRTRGAAGSTvfvpaaediesrgggE 1091
Cdd:COG4913 420 ELR-------ELEAEIASLERRKSNIPARLLALRD--------------------ALAEALGLD---------------E 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1092 IDIPSSGDVIHGRDG-RDGRDAGNRGTHTITNT---KERIERIEKNILDRYHDDE-LVEHKIREVNdrwkRELERLENEK 1166
Cdd:COG4913 458 AELPFVGELIEVRPEeERWRGAIERVLGGFALTllvPPEHYAAALRWVNRLHLRGrLVYERVRTGL----PDPERPRLDP 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1167 DDLERRI--------RELEDELSQigRGNDKTENDITELKR-KHAAEIDKLKSDISALHDKhlsdlDDEKEQYGKAV--- 1234
Cdd:COG4913 534 DSLAGKLdfkphpfrAWLEAELGR--RFDYVCVDSPEELRRhPRAITRAGQVKGNGTRHEK-----DDRRRIRSRYVlgf 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1235 ENlksveddlRDKLNNLEKQLAdslnrenELEREKRDYDEKINSL---YGQNQKIKDEWDDFRNDADKEIqkwktDAYTV 1311
Cdd:COG4913 607 DN--------RAKLAALEAELA-------ELEEELAEAEERLEALeaeLDALQERREALQRLAEYSWDEI-----DVASA 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1312 RSEAKALEttntALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLED- 1390
Cdd:COG4913 667 EREIAELE----AELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDl 742
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1391 QHSTLQSDANKWRGELDAALRENDILKsnntNMETDLTRLKNRLKSAEDALkelknslshaktekERLQNAFREKTK--Q 1468
Cdd:COG4913 743 ARLELRALLEERFAAALGDAVERELRE----NLEERIDALRARLNRAEEEL--------------ERAMRAFNREWPaeT 804
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1469 ADHLNQLAS--QFDTKLTKLRNE------------LQDTNDKLITS-----DTERNALRNELQKLSQELK---FGNE--- 1523
Cdd:COG4913 805 ADLDADLESlpEYLALLDRLEEDglpeyeerfkelLNENSIEFVADllsklRRAIREIKERIDPLNDSLKripFGPGryl 884
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1524 QI---QRKSDEYQTTIDDLahsHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLAT 1580
Cdd:COG4913 885 RLearPRPDPEVREFRQEL---RAVTSGASLFDEELSEARFAALKRLIERLRSEEEESDR 941
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
588-1012 |
1.67e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 63.25 E-value: 1.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 588 GKTPLPPSEALRAVRNTFR---NKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDK--QFADAKREISNLQKSVD 662
Cdd:COG4717 63 GRKPELNLKELKELEEELKeaeEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKllQLLPLYQELEALEAELA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 663 EAERNSrrtdDKLRASEAERVAAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEHTNSIQEEFKTRIDELNRRVEN 742
Cdd:COG4717 143 ELPERL----EELEERLEELRELEEELEELEAELAELQE--------ELEELLEQLSLATEEELQDLAEELEELQQRLAE 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 743 LLRENNRLKSEVNPLKDKYRDLENEYNSTQ--RRIEEKETQIR----------YSDDIRRNIQKDLD----------DLR 800
Cdd:COG4717 211 LEEELEEAQEELEELEEELEQLENELEAAAleERLKEARLLLLiaaallallgLGGSLLSLILTIAGvlflvlgllaLLF 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 801 EKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDI-------------------RHKLET 861
Cdd:COG4717 291 LLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRieelqellreaeeleeelqLEELEQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 862 EIKgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKG-----HQGKITHLENELHSRSGEIEKLNDLN 936
Cdd:COG4717 371 EIA--ALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGEleellEALDEEELEEELEELEEELEELEEEL 448
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 937 QRLQKEKQDILNQKLKLDGDvqalkETIRKLENELEKLRNENKELVgKEARARDAANQQLSRAnllNKELEDTKQD 1012
Cdd:COG4717 449 EELREELAELEAELEQLEED-----GELAELLQELEELKAELRELA-EEWAALKLALELLEEA---REEYREERLP 515
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1147-1605 |
2.31e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 62.86 E-value: 2.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1147 KIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRkhaaEIDKLKSDISALHD-KHLSDLDD 1225
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELRE----ELEKLEKLLQLLPLyQELEALEA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1226 EKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWK 1305
Cdd:COG4717 140 ELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQ 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1306 TDAYTVRSEAKALETtntalKAQLQAANDRIDHLTKTVNDhTSKVRDLTSQVRHLEDELADTKG--------------NL 1371
Cdd:COG4717 220 EELEELEEELEQLEN-----ELEAAALEERLKEARLLLLI-AAALLALLGLGGSLLSLILTIAGvlflvlgllallflLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1372 VQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAalrENDILKSNNTNMETDLTRLKNRLKSAEDALKELKnsLSHA 1451
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGL---PPDLSPEELLELLDRIEELQELLREAEELEEELQ--LEEL 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1452 KTEKERLQN--------AFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERnaLRNELQKLSQELKFGNE 1523
Cdd:COG4717 369 EQEIAALLAeagvedeeELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEE--LEEELEELEEELEELEE 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1524 QIQRKSDEYQTT---IDDLAHSHRVSEdsrlnALQELEARKyeindltsrldsteQRLATLQQDYIKADSERDILSDALR 1600
Cdd:COG4717 447 ELEELREELAELeaeLEQLEEDGELAE-----LLQELEELK--------------AELRELAEEWAALKLALELLEEARE 507
|
....*
gi 1767287505 1601 RFQSS 1605
Cdd:COG4717 508 EYREE 512
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1772-2136 |
2.67e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 62.48 E-value: 2.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1772 QKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKskmvaaelqargKEAQLRHLNEQLKNLR 1851
Cdd:COG4717 85 EKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEA------------LEAELAELPERLEELE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1852 TDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDT 1931
Cdd:COG4717 153 ERLEELRELEEELEELEAELAELQEELEELLEQLSLAT---EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEEL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1932 DKLRRDLTKAEsVENELRK-------------------------------------------TIDIQSKTSHEYQLLKDQ 1968
Cdd:COG4717 230 EQLENELEAAA-LEERLKEarlllliaaallallglggsllsliltiagvlflvlgllallfLLLAREKASLGKEAEELQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1969 LLNTQNELNGA--NNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVE-DRFLSVEKVvntmrTT 2045
Cdd:COG4717 309 ALPALEELEEEelEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEiAALLAEAGV-----ED 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2046 ETDLRQQLEtAKNEKRVATKELEDLKRRLAQLENERRNSSQLSD--GWKKEKITLLKKIELLENEKRRTDAAIRETALQR 2123
Cdd:COG4717 384 EEELRAALE-QAEEYQELKEELEELEEQLEELLGELEELLEALDeeELEEELEELEEELEELEEELEELREELAELEAEL 462
|
410
....*....|...
gi 1767287505 2124 EAIEKSLNAMERE 2136
Cdd:COG4717 463 EQLEEDGELAELL 475
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1739-2215 |
2.89e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 62.73 E-value: 2.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1739 LNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSaktllrsqeeaLKQRDEE 1818
Cdd:TIGR04523 144 LTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSN-----------LKKKIQK 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1819 RRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQwdsSRFQLETKMRESDSDTNKyqlqIAS 1898
Cdd:TIGR04523 213 NKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNK---IKKQLSEKQKELEQNNKK----IKE 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1899 FESERQILTEKIKELDgalrlsDSKVQD-MKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELN 1977
Cdd:TIGR04523 286 LEKQLNQLKSEISDLN------NQKEQDwNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENS 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1978 GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQ-----------------------------------DAN 2022
Cdd:TIGR04523 360 EKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQnqeklnqqkdeqikklqqekellekeierlketiiKNN 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2023 TEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQ-------LENERRNSSQLSDGWKKEK 2095
Cdd:TIGR04523 440 SEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSkekelkkLNEEKKELEEKVKDLTKKI 519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2096 ITLLKKIELLENEKRRTDAAIREtalqreaIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQER 2175
Cdd:TIGR04523 520 SSLKEKIEKLESEKKEKESKISD-------LEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELID 592
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 1767287505 2176 QLirmRQEKGQIEKVIENRERThrnrIKQLEDQIAILRDQ 2215
Cdd:TIGR04523 593 QK---EKEKKDLIKEIEEKEKK----ISSLEKELEKAKKE 625
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
670-1555 |
3.47e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 62.50 E-value: 3.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 670 RTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDD---ARKLRDEMDEHTNSiqEEFKTRIDELNRRVENLLRE 746
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKnalQEQLQAETELCAEA--EEMRARLAARKQELEEILHE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 747 nnrLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTD-------NEKILGELEH 819
Cdd:pfam01576 80 ---LESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDillledqNSKLSKERKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 820 AQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLR- 898
Cdd:pfam01576 157 LEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRa 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 899 ---RHNDELdttikghQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---KLDGDVQALKETIRKLENELE 972
Cdd:pfam01576 237 qlaKKEEEL-------QAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAarnKAEKQRRDLGEELEALKTELE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 973 ----------KLRNENKELVG-------KEARARDAANQQLSRA-----NLLNKELEDTKQDlKHSTDVNKQ-LEQDIRD 1029
Cdd:pfam01576 310 dtldttaaqqELRSKREQEVTelkkaleEETRSHEAQLQEMRQKhtqalEELTEQLEQAKRN-KANLEKAKQaLESENAE 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1030 LKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVfvpaaedieSRGGGEID-IPSSGDVIHGRDGRD 1108
Cdd:pfam01576 389 LQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKL---------SKLQSELEsVSSLLNEAEGKNIKL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1109 GRDAGNRGTHtITNTKERIERIEKNILDryhddelVEHKIREVNDRWKRELERLENE---KDDLERRIRELEDELSQIGR 1185
Cdd:pfam01576 460 SKDVSSLESQ-LQDTQELLQEETRQKLN-------LSTRLRQLEDERNSLQEQLEEEeeaKRNVERQLSTLQAQLSDMKK 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1186 gndKTEND------ITELKRKHAAEIDKLKSDI---SALHDKhlsdLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQ-- 1254
Cdd:pfam01576 532 ---KLEEDagtleaLEEGKKRLQRELEALTQQLeekAAAYDK----LEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKqk 604
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1255 -----LADSLN----------------RENE-----LEREKRDYDEKINSLYGQNQKIKDEWDDF---RNDADKEIQKWK 1305
Cdd:pfam01576 605 kfdqmLAEEKAisaryaeerdraeaeaREKEtralsLARALEEALEAKEELERTNKQLRAEMEDLvssKDDVGKNVHELE 684
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1306 TDAYTVRSEAKALETTNTALKAQLQAANDRidHLTKTVNDHTSKV-----------------RDLTSQVRHLEDELADTK 1368
Cdd:pfam01576 685 RSKRALEQQVEEMKTQLEELEDELQATEDA--KLRLEVNMQALKAqferdlqardeqgeekrRQLVKQVRELEAELEDER 762
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1369 GNLVQK-------EMDL--------------ESTQNRLRSLEDQHSTLQ---SDANKWRGELDAALRENDilkSNNTNME 1424
Cdd:pfam01576 763 KQRAQAvaakkklELDLkeleaqidaankgrEEAVKQLKKLQAQMKDLQrelEEARASRDEILAQSKESE---KKLKNLE 839
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1425 TDLTRLKNRLKSAEDALKelknslsHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQD-------TNDKL 1497
Cdd:pfam01576 840 AELLQLQEDLAASERARR-------QAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEeqsntelLNDRL 912
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 1498 ITSDTERNALRNELQ---KLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQ 1555
Cdd:pfam01576 913 RKSTLQVEQLTTELAaerSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFKSSIAALE 973
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
518-1037 |
4.08e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 62.44 E-value: 4.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 518 EESIERNIELESRG-DDSQRKIAELEAELRRNREKLNEAQGALK-KLHEMAQDSeknvDGTVSIKRTRSLSPG------K 589
Cdd:pfam15921 73 KEHIERVLEEYSHQvKDLQRRLNESNELHEKQKFYLRQSVIDLQtKLQEMQMER----DAMADIRRRESQSQEdlrnqlQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 590 TPLPPSEALRAVR-NTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEAR-RRLDKQFADAKREISNLQKSVDEAern 667
Cdd:pfam15921 149 NTVHELEAAKCLKeDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASgKKIYEHDSMSTMHFRSLGSAISKI--- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 668 srrtddkLRASEAErVAAEKARKF-LEDELAKLQASFQ-------KSSTDDARKLRDEMD--------------EHTNSI 725
Cdd:pfam15921 226 -------LRELDTE-ISYLKGRIFpVEDQLEALKSESQnkielllQQHQDRIEQLISEHEveitgltekassarSQANSI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 726 QEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYnstQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDR 805
Cdd:pfam15921 298 QSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMY---EDKIEELEKQLVLANSELTEARTERDQFSQESGN 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 806 VHTDNEKILGELEHAQKAAHLAEQQLKEIkIQRDDYQKQKDEHARHLFDIRH-----------KLETEIKGRQDLEKNGA 874
Cdd:pfam15921 375 LDDQLQKLLADLHKREKELSLEKEQNKRL-WDRDTGNSITIDHLRRELDDRNmevqrleallkAMKSECQGQMERQMAAI 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 875 R-NNDELDKLRQTISDYESQINLLRRHNDELDT---TIKGHQGKITHLENELHSRSGEIEKLN----DLNQRLQKEKQDI 946
Cdd:pfam15921 454 QgKNESLEKVSSLTAQLESTKEMLRKVVEELTAkkmTLESSERTVSDLTASLQEKERAIEATNaeitKLRSRVDLKLQEL 533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 947 lnQKLKLDGD--------VQALKETIRKLENELEKLRN--EN-KELVGKEARArdAANQQLSRANLlNKELEDTKQDLKH 1015
Cdd:pfam15921 534 --QHLKNEGDhlrnvqteCEALKLQMAEKDKVIEILRQqiENmTQLVGQHGRT--AGAMQVEKAQL-EKEINDRRLELQE 608
|
570 580
....*....|....*....|..
gi 1767287505 1016 STDVNKQLEQDIRDLKERLANI 1037
Cdd:pfam15921 609 FKILKDKKDAKIRELEARVSDL 630
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1967-2238 |
4.79e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.93 E-value: 4.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1967 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRflsvekvVNTMRTTE 2046
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAE-------LAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2047 TDLRQQLETAKnekrvatkelEDLKRRLAQLENERRNSsqlsdgwkkekitllkKIELLENEKRRTDAAIRETALQR--E 2124
Cdd:COG4942 93 AELRAELEAQK----------EELAELLRALYRLGRQP----------------PLALLLSPEDFLDAVRRLQYLKYlaP 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2125 AIEKSLNAMERENKELykncaqlqqQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQ 2204
Cdd:COG4942 147 ARREQAEELRADLAEL---------AALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE 217
|
250 260 270
....*....|....*....|....*....|....
gi 1767287505 2205 LEDQIAILRDQLDGERRRRREYVDRSMVNDIGRL 2238
Cdd:COG4942 218 LQQEAEELEALIARLEAEAAAAAERTPAAGFAAL 251
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
507-1584 |
4.95e-09 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 62.38 E-value: 4.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 507 AELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLS 586
Cdd:TIGR01612 747 GEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIK 826
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 587 PGKTPLPPSEaLRAVRNTFRNKDNDIQQLE----RKLKIAESQVKEFLNKFEN--ADEARRRLDKQFADAKREISNLQKS 660
Cdd:TIGR01612 827 EDEIFKIINE-MKFMKDDFLNKVDKFINFEnnckEKIDSEHEQFAELTNKIKAeiSDDKLNDYEKKFNDSKSLINEINKS 905
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 661 VDEAERNS---RRTDDKLRASEAERVAAEKarkfledelaklqasFQKSSTDDARKLRDEMD--EHTNSIQEEFKTRIDe 735
Cdd:TIGR01612 906 IEEEYQNIntlKKVDEYIKICENTKESIEK---------------FHNKQNILKEILNKNIDtiKESNLIEKSYKDKFD- 969
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 736 lnrrvenllrenNRLKSEVNPLKDKYRDLE-NEYNSTQRRIeeketqIRYSDDIRRNIQKDLDD-LREKYDrvhtDNEKI 813
Cdd:TIGR01612 970 ------------NTLIDKINELDKAFKDASlNDYEAKNNEL------IKYFNDLKANLGKNKENmLYHQFD----EKEKA 1027
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 814 LGELEhaqkaahlaeqqlkeikiqrddyqkQKDEHA-RHLFDIRHKLETEIKG-RQDLEKNGARNNDELDKlrqtisdye 891
Cdd:TIGR01612 1028 TNDIE-------------------------QKIEDAnKNIPNIEIAIHTSIYNiIDEIEKEIGKNIELLNK--------- 1073
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 892 sqiNLLRRHNDELdTTIKGHQGKITHLENELHSRSGEIEKLNDLNqrlqKEKQDILNQKLKLDGDVQALKETIRKLENEL 971
Cdd:TIGR01612 1074 ---EILEEAEINI-TNFNEIKEKLKHYNFDDFGKEENIKYADEIN----KIKDDIKNLDQKIDHHIKALEEIKKKSENYI 1145
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 972 EKLRNENKELvgkearaRDAANQQLSRANLlnKELEDTKQDLKHSTDVNKQLEQDIRDLKERLAnigkggRISRDSTTgt 1051
Cdd:TIGR01612 1146 DEIKAQINDL-------EDVADKAISNDDP--EEIEKKIENIVTKIDKKKNIYDEIKKLLNEIA------EIEKDKTS-- 1208
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1052 dggafgdRSSVADPSRTRGAAGSTVFVPAAEdiESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTItntkERIERIE 1131
Cdd:TIGR01612 1209 -------LEEVKGINLSYGKNLGKLFLEKID--EEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGI----EMDIKAE 1275
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1132 KNILDRYHDDELVEHKIREVNDrwkrelerlENEKDDLERRIRELED--ELSQIGRGNDKTENDITElKRKHAAEIDKLK 1209
Cdd:TIGR01612 1276 METFNISHDDDKDHHIISKKHD---------ENISDIREKSLKIIEDfsEESDINDIKKELQKNLLD-AQKHNSDINLYL 1345
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1210 SDISALHD----KHLSDLDDEKEQYGKAVE-NLKSVEDDLrDKLNNLEKQLADSLNreneLEREKrdydekinslygqnQ 1284
Cdd:TIGR01612 1346 NEIANIYNilklNKIKKIIDEVKEYTKEIEeNNKNIKDEL-DKSEKLIKKIKDDIN----LEECK--------------S 1406
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1285 KIKDEWDDfrNDADKEIQKWKTDAYTVRSEakalETTNTALKAQLQAANDRIDHLTKTVndhtskvrdltsqvrhledEL 1364
Cdd:TIGR01612 1407 KIESTLDD--KDIDECIKKIKELKNHILSE----ESNIDTYFKNADENNENVLLLFKNI-------------------EM 1461
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1365 ADTKGNLVQKEM------DLESTQNRLRSLEDQHSTLQSDANKWRgeldAALRENDILKSnntNMETDLTRLKNRLKSAe 1438
Cdd:TIGR01612 1462 ADNKSQHILKIKkdnatnDHDFNINELKEHIDKSKGCKDEADKNA----KAIEKNKELFE---QYKKDVTELLNKYSAL- 1533
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1439 dalkELKNSLSHAKTEKERLQNAFREKTKQadhLNQLASQFDTKLTKLRNE---LQD-------TNDKLITSDTERNALR 1508
Cdd:TIGR01612 1534 ----AIKNKFAKTKKDSEIIIKEIKDAHKK---FILEAEKSEQKIKEIKKEkfrIEDdaakndkSNKAAIDIQLSLENFE 1606
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1509 NELQKLSQELKFGN------EQIQRKSDEYQTTIDDLAHSHRVSEDSRLNA-LQELEARKYEINDLTSRLDSTEQRLATL 1581
Cdd:TIGR01612 1607 NKFLKISDIKKKINdclketESIEKKISSFSIDSQDTELKENGDNLNSLQEfLESLKDQKKNIEDKKKELDELDSEIEKI 1686
|
...
gi 1767287505 1582 QQD 1584
Cdd:TIGR01612 1687 EID 1689
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
596-1237 |
5.23e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.85 E-value: 5.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 596 EALRAVRNTFRnkdnDIQQLERKLKIAESQVK---EFLNKFENADEARRRLDK-QFADAKREISNLQKSVDEAERNSRRT 671
Cdd:COG4913 225 EAADALVEHFD----DLERAHEALEDAREQIEllePIRELAERYAAARERLAElEYLRAALRLWFAQRRLELLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 672 DDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDD-----------------ARKLRDEMDEHTNSI--------- 725
Cdd:COG4913 301 RAELARLEAELERLEARLDALREELDELEAQIRGNGGDRleqlereierlereleeRERRRARLEALLAALglplpasae 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 726 -----QEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRR---IEEKETQIRysDDIRRNIQKDLD 797
Cdd:COG4913 381 efaalRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRksnIPARLLALR--DALAEALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 798 DL---------REKYDRVHTDNEKILG--------ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIR---H 857
Cdd:COG4913 459 ELpfvgelievRPEEERWRGAIERVLGgfaltllvPPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDslaG 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 858 KLET-----------EIKGRQDLEKngARNNDELDKLRQTISDyESQI-NLLRRHndELDTTIKGHQG---------KIT 916
Cdd:COG4913 539 KLDFkphpfrawleaELGRRFDYVC--VDSPEELRRHPRAITR-AGQVkGNGTRH--EKDDRRRIRSRyvlgfdnraKLA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 917 HLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDG---------DVQALKETIRKLENELEKLRNENKELvgkear 987
Cdd:COG4913 614 ALEAELAELEEELAEAEERLEALEAELDALQERREALQRlaeyswdeiDVASAEREIAELEAELERLDASSDDL------ 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 988 arDAANQQLSRanlLNKELEDTKQDLkhstdvnKQLEQDIRDLKERLANIgkggrisrdsttgtdggafgdRSSVADPSR 1067
Cdd:COG4913 688 --AALEEQLEE---LEAELEELEEEL-------DELKGEIGRLEKELEQA---------------------EEELDELQD 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1068 TRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVihGRDGRDGRDAGNRgthTITNTKERIERIEKNILDRYHD------- 1140
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGDAVEREL--RENLEERIDALRA---RLNRAEEELERAMRAFNREWPAetadlda 809
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1141 ------------DELVEHKIREVNDRWKRELER------------LENEKDDLERRIRELEDELSQIGRGNDKTendIT- 1195
Cdd:COG4913 810 dleslpeylallDRLEEDGLPEYEERFKELLNEnsiefvadllskLRRAIREIKERIDPLNDSLKRIPFGPGRY---LRl 886
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 1767287505 1196 ELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENL 1237
Cdd:COG4913 887 EARPRPDPEVREFRQELRAVTSGASLFDEELSEARFAALKRL 928
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
610-1037 |
5.28e-09 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 61.41 E-value: 5.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 610 NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVdeaernsrrtddklrasEAERVAAEKAR 689
Cdd:pfam06160 86 KALDEIEELLDDIEEDIKQILEELDELLESEEKNREEVEELKDKYRELRKTL-----------------LANRFSYGPAI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 690 KFLEDELAKLQASFQKSST-------DDARKLRDEMDEHTNSIQEEFKtRIDELNRRVENLlrennrLKSEVNPLKDKYR 762
Cdd:pfam06160 149 DELEKQLAEIEEEFSQFEEltesgdyLEAREVLEKLEEETDALEELME-DIPPLYEELKTE------LPDQLEELKEGYR 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 763 DLENE-YNSTQRRIEEKETQIRysDDIRRNIQK----DLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQ 837
Cdd:pfam06160 222 EMEEEgYALEHLNVDKEIQQLE--EQLEENLALlenlELDEAEEALEEIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDY 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 838 RDDYQKQKDEharhlfdirhkLETEIkgrQDLEKNGARNNDELDKLRQtisdYESQINLLRRHNDELDTTIKGHQGKITH 917
Cdd:pfam06160 300 LEHAEEQNKE-----------LKEEL---ERVQQSYTLNENELERVRG----LEKQLEELEKRYDEIVERLEEKEVAYSE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 918 LENELhsrsgeIEKLNDLNQrLQKEKQDILNQKLKLDGDVQALKETIRKLENELE--KLRNENKELVGKEARARDAANQQ 995
Cdd:pfam06160 362 LQEEL------EEILEQLEE-IEEEQEEFKESLQSLRKDELEAREKLDEFKLELReiKRLVEKSNLPGLPESYLDYFFDV 434
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1767287505 996 LSRANLLNKELEDTKQDLKhstDVNKQLE---QDIRDLKERLANI 1037
Cdd:pfam06160 435 SDEIEDLADELNEVPLNMD---EVNRLLDeaqDDVDTLYEKTEEL 476
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
610-1033 |
6.23e-09 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 61.39 E-value: 6.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 610 NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVdeaernsrrtddklrasEAERVAAEKAR 689
Cdd:PRK04778 105 HEINEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSL-----------------LANRFSFGPAL 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 690 KFLEDELAKLQASFQKSST-------DDARKLRDEMDEHTNsiqeEFKTRIDElnrrVENLLRE-NNRLKSEVNPLKDKY 761
Cdd:PRK04778 168 DELEKQLENLEEEFSQFVEltesgdyVEAREILDQLEEELA----ALEQIMEE----IPELLKElQTELPDQLQELKAGY 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 762 RDLENE-YNstqrrIEEKetqirysddirrNIQKDLDDLREKYDRvhtdNEKILGELEHAQkaahlAEQQLKEIKIQRDd 840
Cdd:PRK04778 240 RELVEEgYH-----LDHL------------DIEKEIQDLKEQIDE----NLALLEELDLDE-----AEEKNEEIQERID- 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 841 yqkqkdeharHLFDIrhkLETEIKGRQDLEKNgarnndeldklrqtISDYESQINLLRRHNDELDTtikghqgKITHL-- 918
Cdd:PRK04778 293 ----------QLYDI---LEREVKARKYVEKN--------------SDTLPDFLEHAKEQNKELKE-------EIDRVkq 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 919 -----ENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---KLDGDVQALKETIRKLENELEKLRNENKELVGKEARARD 990
Cdd:PRK04778 339 sytlnESELESVRQLEKQLESLEKQYDEITERIAEQEIaysELQEELEEILKQLEEIEKEQEKLSEMLQGLRKDELEARE 418
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 991 AANQ----------QLSRANL--------------------LNKELEDTKQDLKhstDVNKQLEQ---DIRDLKER 1033
Cdd:PRK04778 419 KLERyrnklheikrYLEKSNLpglpedylemffevsdeieaLAEELEEKPINME---AVNRLLEEateDVETLEEE 491
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1120-1581 |
6.96e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.23 E-value: 6.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1120 ITNTKERIERIEKNIL--DRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRgndkTENDITEL 1197
Cdd:PRK03918 140 ILESDESREKVVRQILglDDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLR----EINEISSE 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1198 KRKHAAEIDKLKSDISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRdklnNLEKQLADSLNRENELEREKRDYDE--K 1275
Cdd:PRK03918 216 LPELREELEKLEKEVKEL-EELKEEIEELEKELESLEGSKRKLEEKIR----ELEERIEELKKEIEELEEKVKELKElkE 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1276 INSLYGQNQKIKDEWDDFRNDADKEIQKWktdaytvRSEAKALEttntalkAQLQAANDRidhltktvndhTSKVRDLTS 1355
Cdd:PRK03918 291 KAEEYIKLSEFYEEYLDELREIEKRLSRL-------EEEINGIE-------ERIKELEEK-----------EERLEELKK 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1356 QVRHLEDELADTKGNlVQKEMDLESTQNRLRSLEDQHSTLQSDanKWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1435
Cdd:PRK03918 346 KLKELEKRLEELEER-HELYEEAKAKKEELERLKKRLTGLTPE--KLEKELEELEKAKEEIEEEISKITARIGELKKEIK 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1436 SAEDALKELKNS-----LSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTnDKLITSDTERNALR-- 1508
Cdd:PRK03918 423 ELKKAIEELKKAkgkcpVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELREL-EKVLKKESELIKLKel 501
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 1509 -NELQKLSQELK-FGNEQIQRKSDEYQTTIDDLA--HSHRVSEDSRLNALQELEARKYEINdltSRLDSTEQRLATL 1581
Cdd:PRK03918 502 aEQLKELEEKLKkYNLEELEKKAEEYEKLKEKLIklKGEIKSLKKELEKLEELKKKLAELE---KKLDELEEELAEL 575
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
855-1038 |
1.00e-08 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 60.64 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 855 IRHKLETEI-KGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELdttikghqgkithlENELHSRSGEIEKLN 933
Cdd:COG2433 382 LEELIEKELpEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEEL--------------EAELEEKDERIERLE 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 934 DlnqRLQKEKQDIlNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELED-TKQD 1012
Cdd:COG2433 448 R---ELSEARSEE-RREIRKDREISRLDREIERLERELEEERERIEELKRKLERLKELWKLEHSGELVPVKVVEKfTKEA 523
|
170 180 190
....*....|....*....|....*....|....*.
gi 1767287505 1013 LKHSTDVNKQLEQDI----------RDLKERLANIG 1038
Cdd:COG2433 524 IRRLEEEYGLKEGDVvylrdasgagRSTAELLAEAG 559
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
511-1038 |
1.01e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.82 E-value: 1.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 511 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEmaqdseknvdgtvsiKRTRSLSPGKT 590
Cdd:PRK02224 240 DEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEE---------------ERDDLLAEAGL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 591 PLPPSEALRAVRNTFrnkDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRR 670
Cdd:PRK02224 305 DDADAEAVEARREEL---EDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVED 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 671 TDDKLRASEAERVAAEKARKFLEDELaklqasfqksstDDARKLRDEMDEHTNSIQEEFKTRIDELnRRVENLLRENNRL 750
Cdd:PRK02224 382 RREEIEELEEEIEELRERFGDAPVDL------------GNAEDFLEELREERDELREREAELEATL-RTARERVEEAEAL 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 751 KSEVN------PLKDkyrdleneyNSTQRRIEEKETQIrysddirRNIQKDLDDLREKYDRVhtdnEKILGELEHAQKaa 824
Cdd:PRK02224 449 LEAGKcpecgqPVEG---------SPHVETIEEDRERV-------EELEAELEDLEEEVEEV----EERLERAEDLVE-- 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 825 hlAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDEL 904
Cdd:PRK02224 507 --AEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAEL 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 905 DTTIKGhQGKITHLENELHSRSGEIEKLNDLNQRLQkEKQDILNQKLKldgdvqALKETIRKLENELEKLRNEnkelvgk 984
Cdd:PRK02224 585 KERIES-LERIRTLLAAIADAEDEIERLREKREALA-ELNDERRERLA------EKRERKRELEAEFDEARIE------- 649
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 985 EARA-RDAANQQLSRANLLNKELEDTKQDLKHSTD-VNKQLEQdIRDLKERLANIG 1038
Cdd:PRK02224 650 EAREdKERAEEYLEQVEEKLDELREERDDLQAEIGaVENELEE-LEELRERREALE 704
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
929-1520 |
1.04e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.85 E-value: 1.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 929 IEKLNDLNQRLQKEKQDILNQKLKLDGDVQA---LKETIRKLENELEKLRNENKELVGKEARARdaanQQLSRANLLNKE 1005
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIKRRIERLEKFIKRtenIEELIKEKEKELEEVLREINEISSELPELR----EELEKLEKEVKE 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1006 LEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTtgtdggafgdrssvadpsrtrgaagstvfvpaaEDIE 1085
Cdd:PRK03918 233 LEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEI---------------------------------EELE 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1086 SRGG--GEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEhKIREVNDRWKRELERLE 1163
Cdd:PRK03918 280 EKVKelKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-ELKKKLKELEKRLEELE 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1164 nEKDDLERRIRELEDELSQI-----GRGNDKTENDITELKRKHaaeiDKLKSDISALHDKhLSDLDDEKEQYGKAVENLK 1238
Cdd:PRK03918 359 -ERHELYEEAKAKKEELERLkkrltGLTPEKLEKELEELEKAK----EEIEEEISKITAR-IGELKKEIKELKKAIEELK 432
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1239 SVE-------------------DDLRDKLNNLEKQLADSLNRENELEREKRDYDEKIN---------SLYGQNQKIKDEW 1290
Cdd:PRK03918 433 KAKgkcpvcgrelteehrkellEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKkeseliklkELAEQLKELEEKL 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1291 DDFrnDADKEIQKWKtdaytvrsEAKALETTNTALKAQLQAANDRIdhltKTVNDHTSKVRDLTSQVRHLEDELADTKGN 1370
Cdd:PRK03918 513 KKY--NLEELEKKAE--------EYEKLKEKLIKLKGEIKSLKKEL----EKLEELKKKLAELEKKLDELEEELAELLKE 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1371 LVQKEM-DLESTQNRLRSLEDQHSTLQSdANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLS 1449
Cdd:PRK03918 579 LEELGFeSVEELEERLKELEPFYNEYLE-LKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYS 657
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 1450 haKTEKERLQNAFREKTKQadhLNQLASQFDTkLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKF 1520
Cdd:PRK03918 658 --EEEYEELREEYLELSRE---LAGLRAELEE-LEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALER 722
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
842-1039 |
1.57e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.39 E-value: 1.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 842 QKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENE 921
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 922 LHSRSGEIEKLNDLNQRL--QKEKQDILNQK--LKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLS 997
Cdd:COG4942 99 LEAQKEELAELLRALYRLgrQPPLALLLSPEdfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1767287505 998 RANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1039
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQ 220
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1742-2213 |
1.61e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.08 E-value: 1.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1742 IEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRlqsaKTLLRSQEEALKQRDEERRQ 1821
Cdd:PRK03918 181 LEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEEL----KEEIEELEKELESLEGSKRK 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1822 MKSKMVAAELQARGKEAQLRHLNEQLKnlrtdldnahtDIRSLRDKEEQWDssrfQLETKMRESDSDTNKYQLQIASFES 1901
Cdd:PRK03918 257 LEEKIRELEERIEELKKEIEELEEKVK-----------ELKELKEKAEEYI----KLSEFYEEYLDELREIEKRLSRLEE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1902 ERQILTEKIKELDGalrlSDSKVQDMKDDTDKLRRDL----TKAESVENELRKTIDIQSKTSHEYQLLKDQLlntQNELN 1977
Cdd:PRK03918 322 EINGIEERIKELEE----KEERLEELKKKLKELEKRLeeleERHELYEEAKAKKEELERLKKRLTGLTPEKL---EKELE 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1978 GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQ---------RQLQDANTEKNRVEDRFLSVEKVVNTMRTTETD 2048
Cdd:PRK03918 395 ELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcGRELTEEHRKELLEEYTAELKRIEKELKEIEEK 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2049 LRQ------QLETA-KNEKRVAT-----KELEDLKRRLAQLENER--------RNSSQLSDGWKKEKITL---LKKIELL 2105
Cdd:PRK03918 475 ERKlrkelrELEKVlKKESELIKlkelaEQLKELEEKLKKYNLEElekkaeeyEKLKEKLIKLKGEIKSLkkeLEKLEEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2106 ENEKRRTDAAIREtalqreaIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQReEQERQLIRMRQEKG 2185
Cdd:PRK03918 555 KKKLAELEKKLDE-------LEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEK-ELEREEKELKKLEE 626
|
490 500
....*....|....*....|....*...
gi 1767287505 2186 QIEKVIENRERThRNRIKQLEDQIAILR 2213
Cdd:PRK03918 627 ELDKAFEELAET-EKRLEELRKELEELE 653
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1729-2209 |
1.62e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1729 ANLEGTLQSLLNKIEklEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLlrsq 1808
Cdd:PRK02224 183 SDQRGSLDQLKAQIE--EKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETL---- 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1809 EEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESdsd 1888
Cdd:PRK02224 257 EAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEC--- 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1889 tnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSK----TSHEYQL 1964
Cdd:PRK02224 334 ----RVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRErfgdAPVDLGN 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1965 LKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQ---------------------RVHDVNNRVSELQRQLQDANT 2023
Cdd:PRK02224 410 AEDFLEELREERDELREREAELEATLRTARERVEEAEAlleagkcpecgqpvegsphveTIEEDRERVEELEAELEDLEE 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2024 EKNRVEDRFLSVEKVVNTMRTTETdLRQQLETAknEKRVATKElEDLKRRLAQLENERRNSSQLSDgwkkekitllkkie 2103
Cdd:PRK02224 490 EVEEVEERLERAEDLVEAEDRIER-LEERREDL--EELIAERR-ETIEEKRERAEELRERAAELEA-------------- 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2104 llENEKRRTDAAIRETALQREAIE-KSLNAMERENKElykncaqlqqqiaqlEMENGNRILELTNKqREEQERQLIRMRQ 2182
Cdd:PRK02224 552 --EAEEKREAAAEAEEEAEEAREEvAELNSKLAELKE---------------RIESLERIRTLLAA-IADAEDEIERLRE 613
|
490 500 510
....*....|....*....|....*....|
gi 1767287505 2183 EKGQI-EKVIENRER--THRNRIKQLEDQI 2209
Cdd:PRK02224 614 KREALaELNDERRERlaEKRERKRELEAEF 643
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1727-1924 |
1.87e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.01 E-value: 1.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1727 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1806
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1807 SQEEALKQR-----------------------DEERRQMKSKMVAAELQARGKEaqLRHLNEQLKNLRTDLDNAHTDIRS 1863
Cdd:COG4942 101 AQKEELAELlralyrlgrqpplalllspedflDAVRRLQYLKYLAPARREQAEE--LRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1864 LRDKEEQ----WDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKV 1924
Cdd:COG4942 179 LLAELEEeraaLEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
511-1331 |
1.89e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 59.99 E-value: 1.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 511 KELMTKYEESIERNIELESRGDDSQR--KIAELEAELRRNREKLNEAQGALKKLHEMA--QDSEKNVDGTVSIKRTRSLS 586
Cdd:pfam02463 176 KKLIEETENLAELIIDLEELKLQELKlkEQAKKALEYYQLKEKLELEEEYLLYLDYLKlnEERIDLLQELLRDEQEEIES 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 587 PGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAER 666
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 667 NSRRTDDKLRASEAERVAAEKARKFLEDELakLQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRE 746
Cdd:pfam02463 336 EIEELEKELKELEIKREAEEEEEEELEKLQ--EKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLEL 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 747 NNRLKSEVNPLKDKYRDLENEynsTQRRIEEKETQIRysddIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQkaahL 826
Cdd:pfam02463 414 ARQLEDLLKEEKKEELEILEE---EEESIELKQGKLT----EEKEELEKQELKLLKDELELKKSEDLLKETQLVK----L 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 827 AEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDT 906
Cdd:pfam02463 483 QEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEE 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 907 TIKGhQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQaLKETIRKLENELEKLRNENKELVGKE- 985
Cdd:pfam02463 563 RQKL-VRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATL-EADEDDKRAKVVEGILKDTELTKLKEs 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 986 ARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggRISRDSTTGTDGGAFGDRSSVADP 1065
Cdd:pfam02463 641 AKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEI--LRRQLEIKKKEQREKEELKKLKLE 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1066 SRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRdagnrgthtitntKERIERIEKNILDRYHDDELVE 1145
Cdd:pfam02463 719 AEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKE-------------EEKSELSLKEKELAEEREKTEK 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1146 HKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENdiTELKRKHAAEIDKLKSDISALHDKHLSDLDD 1225
Cdd:pfam02463 786 LKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKE--EELEELALELKEEQKLEKLAEEELERLEEEI 863
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1226 EKEQYgKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWK 1305
Cdd:pfam02463 864 TKEEL-LQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLL 942
|
810 820
....*....|....*....|....*.
gi 1767287505 1306 TDAYTVRSEAKALETTNTALKAQLQA 1331
Cdd:pfam02463 943 EEADEKEKEENNKEEEEERNKRLLLA 968
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
634-1045 |
2.49e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 59.40 E-value: 2.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 634 ENADEARRRLDKQFADAKREISNLQKSVDEAE---RNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQksstdd 710
Cdd:COG4717 53 KEADELFKPQGRKPELNLKELKELEEELKEAEekeEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ------ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 711 ARKLRDEMDEHTNSIqEEFKTRIDELNRRVEnllrennrlksEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDdirr 790
Cdd:COG4717 127 LLPLYQELEALEAEL-AELPERLEELEERLE-----------ELRELEEELEELEAELAELQEELEELLEQLSLAT---- 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 791 niQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEI--KIQRDDYQKQKDEHARHLFDI------------- 855
Cdd:COG4717 191 --EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLenELEAAALEERLKEARLLLLIAaallallglggsl 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 856 -------------------------RHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKG 910
Cdd:COG4717 269 lsliltiagvlflvlgllallflllAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEE 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 911 HQGKITHLENELHSRsgEIEKLNDLNQRLQKEKQ----DILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVgkEA 986
Cdd:COG4717 349 LQELLREAEELEEEL--QLEELEQEIAALLAEAGvedeEELRAALEQAEEYQELKEELEELEEQLEELLGELEELL--EA 424
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 987 RARDAANQQLSRanlLNKELEDTKQDLkhstdvnKQLEQDIRDLKERLANIGKGGRISR 1045
Cdd:COG4717 425 LDEEELEEELEE---LEEELEELEEEL-------EELREELAELEAELEQLEEDGELAE 473
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
645-1453 |
2.70e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 59.68 E-value: 2.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 645 KQFADAKREISNLQKSVDEAERNSR-------RTDDKLRA---SEAERVAAEKARKfLEDELAKLQASFQKSSTDDARKL 714
Cdd:TIGR01612 620 KKAIDLKKIIENNNAYIDELAKISPyqvpehlKNKDKIYStikSELSKIYEDDIDA-LYNELSSIVKENAIDNTEDKAKL 698
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 715 RD---EMDEHTNSIQEeFKTRIDELNrrVENLLRENNRLKSEVNPLKDK-YRDLENEYNSTQRRIEEKETQI-------- 782
Cdd:TIGR01612 699 DDlksKIDKEYDKIQN-METATVELH--LSNIENKKNELLDIIVEIKKHiHGEINKDLNKILEDFKNKEKELsnkindya 775
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 783 RYSDDIRRNIQKdLDDLREKY-DRVHTDNEKIlgelEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLET 861
Cdd:TIGR01612 776 KEKDELNKYKSK-ISEIKNHYnDQINIDNIKD----EDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDK 850
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 862 EIkgrqDLEKNGARNNDeldklrqtiSDYESQINLLRRHNDELDTTikghqgKITHLENELHSRSGEIeklNDLNQRLQK 941
Cdd:TIGR01612 851 FI----NFENNCKEKID---------SEHEQFAELTNKIKAEISDD------KLNDYEKKFNDSKSLI---NEINKSIEE 908
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 942 EKQDIlNQKLKLDGDV---QALKETIRKLENELEKLR---NENKELVgKEARARDAANQQLSRANLLNK--ELEDTKQDL 1013
Cdd:TIGR01612 909 EYQNI-NTLKKVDEYIkicENTKESIEKFHNKQNILKeilNKNIDTI-KESNLIEKSYKDKFDNTLIDKinELDKAFKDA 986
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1014 KHST--DVNKQLEQDIRDLKERLANiGKGGRISRDsttgtdggaFGDRSSvadpsrtrgaagstvfvpAAEDIESRG-GG 1090
Cdd:TIGR01612 987 SLNDyeAKNNELIKYFNDLKANLGK-NKENMLYHQ---------FDEKEK------------------ATNDIEQKIeDA 1038
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1091 EIDIPSSGDVIHGrdgrdgrdagnrgthTITNTKERIER-IEKNIlDRYHDDELVEHKIREVNDRWKRELERLENEKDDL 1169
Cdd:TIGR01612 1039 NKNIPNIEIAIHT---------------SIYNIIDEIEKeIGKNI-ELLNKEILEEAEINITNFNEIKEKLKHYNFDDFG 1102
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1170 ER-------RIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALH---DKHLSdlDDEKEQYGKAVENLKS 1239
Cdd:TIGR01612 1103 KEenikyadEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEdvaDKAIS--NDDPEEIEKKIENIVT 1180
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1240 VeddlRDKLNNLEKQLADSLNRENELEREKRDYDE--KINSLYGQN------QKIKDEWDDFRNDAdKEIQKWKTDAYTV 1311
Cdd:TIGR01612 1181 K----IDKKKNIYDEIKKLLNEIAEIEKDKTSLEEvkGINLSYGKNlgklflEKIDEEKKKSEHMI-KAMEAYIEDLDEI 1255
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1312 RSEAKALETTntalkaqlQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKgnlvQKEMDLESTQNRLRSLEDQ 1391
Cdd:TIGR01612 1256 KEKSPEIENE--------MGIEMDIKAEMETFNISHDDDKDHHIISKKHDENISDIR----EKSLKIIEDFSEESDINDI 1323
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 1392 HSTLQ---SDANKWRGELDAALRE----NDILKSNntNMETDLTRLKNRLKSAEDALKELKNSLSHAKT 1453
Cdd:TIGR01612 1324 KKELQknlLDAQKHNSDINLYLNEianiYNILKLN--KIKKIIDEVKEYTKEIEENNKNIKDELDKSEK 1390
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
612-1245 |
2.75e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 59.47 E-value: 2.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 612 IQQLERKLKIAESQVKEFLNKFenaDEARRRLDKQFADAKREIsnlQKSVDEAERNSRRTDDKLRASEAERVAAE-KARK 690
Cdd:pfam12128 260 LSHLHFGYKSDETLIASRQEER---QETSAELNQLLRTLDDQW---KEKRDELNGELSAADAAVAKDRSELEALEdQHGA 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 691 FLEDELAKLQA------SFQ----------KSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEV 754
Cdd:pfam12128 334 FLDADIETAAAdqeqlpSWQselenleerlKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVA 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 755 --------NPLKDKYRDLENEYNSTQRRI-----------------EEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTD 809
Cdd:pfam12128 414 eddlqaleSELREQLEAGKLEFNEEEYRLksrlgelklrlnqatatPELLLQLENFDERIERAREEQEAANAEVERLQSE 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 810 NEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHK------------LETEIKGRQDL--EKNGAR 875
Cdd:pfam12128 494 LRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKeapdweqsigkvISPELLHRTDLdpEVWDGS 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 876 NNDE-------LDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKlndlnqrLQKEKQDILN 948
Cdd:pfam12128 574 VGGElnlygvkLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEK-------ASREETFART 646
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 949 QKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKElEDTKQDLKHSTDVNKQLEQDIR 1028
Cdd:pfam12128 647 ALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLE-EQKEQKREARTEKQAYWQVVEG 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1029 DLKERLANIgkggrisrdsttgtdggafgdRSSVADPSRTRGAAGSTVFVPAAEDIESRGggeIDipssGDVIHGRDgrd 1108
Cdd:pfam12128 726 ALDAQLALL---------------------KAAIAARRSGAKAELKALETWYKRDLASLG---VD----PDVIAKLK--- 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1109 grdagnRGTHTITNTKERIERIEKNILdRYHDdelvehkirEVNDRWKRELERLENEKDDLERRIRELEDELSQI----- 1183
Cdd:pfam12128 775 ------REIRTLERKIERIAVRRQEVL-RYFD---------WYQETWLQRRPRLATQLSNIERAISELQQQLARLiadtk 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1184 --------GRG-NDKTENDITELKRKHAAEIDKL----------KSDISALH-----DKHLSDLDDEKEQYGKAVENLKS 1239
Cdd:pfam12128 839 lrraklemERKaSEKQQVRLSENLRGLRCEMSKLatlkedanseQAQGSIGErlaqlEDLKLKRDYLSESVKKYVEHFKN 918
|
....*.
gi 1767287505 1240 VEDDLR 1245
Cdd:pfam12128 919 VIADHS 924
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
820-1584 |
2.96e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 59.68 E-value: 2.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 820 AQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTIsdyesqinlLRR 899
Cdd:TIGR00606 228 SKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKV---------FQG 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 900 HNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRnenk 979
Cdd:TIGR00606 299 TDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLA---- 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 980 elvgkearardaanqqlsranlLNKELEdtkqDLKHSTDVNKQLEQDIRDLKERLAniGKGGRISRDSTTGTDGGAFGDR 1059
Cdd:TIGR00606 375 ----------------------TRLELD----GFERGPFSERQIKNFHTLVIERQE--DEAKTAAQLCADLQSKERLKQE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1060 ssvadpsrtrgaagstvfvpAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGtHTITNTKERIERIEKNILDRYH 1139
Cdd:TIGR00606 427 --------------------QADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKEL-QQLEGSSDRILELDQELRKAER 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1140 DDELVEHKirEVNDRWKRELERLENEKDDLERRIRELEDELSQIGRgnDKTENDITELKRKHAAEIDKLKSDISALHDKH 1219
Cdd:TIGR00606 486 ELSKAEKN--SLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNH--HTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDE 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1220 LSDLDDE---KEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLygqNQKIKD--EWDDFR 1294
Cdd:TIGR00606 562 LTSLLGYfpnKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSY---EDKLFDvcGSQDEE 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1295 NDAD---KEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDEladtkgnl 1371
Cdd:TIGR00606 639 SDLErlkEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDK-------- 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1372 vqkemdLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHA 1451
Cdd:TIGR00606 711 ------LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESA 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1452 K------TEKERLQNAFREKTKQADHL--NQLASQFDTKLTKLRNELQDTNDKL--ITSDTErnalrnELQKLSQELKFG 1521
Cdd:TIGR00606 785 KvcltdvTIMERFQMELKDVERKIAQQaaKLQGSDLDRTVQQVNQEKQEKQHELdtVVSKIE------LNRKLIQDQQEQ 858
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 1522 NEQIQRKSDEYQT---TIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQD 1584
Cdd:TIGR00606 859 IQHLKSKTNELKSeklQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQE 924
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1728-2189 |
2.97e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 59.35 E-value: 2.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1728 IANLEGTLQSLLNKIEK----LEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKT 1803
Cdd:pfam05483 224 IQHLEEEYKKEINDKEKqvslLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKM 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1804 LLRSQEEALKQRdEERRQMKSKMVAAELQArgKEAQLRHLNE----------QLKNLRTDLDN-AHTDIRSLRDKEEQWD 1872
Cdd:pfam05483 304 SLQRSMSTQKAL-EEDLQIATKTICQLTEE--KEAQMEELNKakaahsfvvtEFEATTCSLEElLRTEQQRLEKNEDQLK 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1873 SSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDgalrlSDSKVQDMKDDTDKLRRDLTKAESVENELRKTI 1952
Cdd:pfam05483 381 IITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLD-----EKKQFEKIAEELKGKEQELIFLLQAREKEIHDL 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1953 DIQ---SKTSHEYQLLKDQLLNTQNElngannrKQQLENELLNVRSE--VRDYKQRVHDVNNRVSELQRQLQDANTEKNR 2027
Cdd:pfam05483 456 EIQltaIKTSEEHYLKEVEDLKTELE-------KEKLKNIELTAHCDklLLENKELTQEASDMTLELKKHQEDIINCKKQ 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2028 vEDRFLsveKVVNTMRTTETDLRQQLETAKNEKRvatKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLEN 2107
Cdd:pfam05483 529 -EERML---KQIENLEEKEMNLRDELESVREEFI---QKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKK 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2108 EKRRTDAAIRETALQREAIEKSLNAmerENKELykNCAQLQQQIAQLEMENG-NRILELTNKQREEQERQLIRMRQEKGQ 2186
Cdd:pfam05483 602 QIENKNKNIEELHQENKALKKKGSA---ENKQL--NAYEIKVNKLELELASAkQKFEEIIDNYQKEIEDKKISEEKLLEE 676
|
...
gi 1767287505 2187 IEK 2189
Cdd:pfam05483 677 VEK 679
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
508-1008 |
3.82e-08 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 58.98 E-value: 3.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 508 ELHKELMTKYEESIERNIELESRGDDSQRKIA-------ELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIK 580
Cdd:pfam05557 13 QLQNEKKQMELEHKRARIELEKKASALKRQLDresdrnqELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 581 RTRSLSpgktplppseaLRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKS 660
Cdd:pfam05557 93 NEKESQ-----------LADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 661 VDEAE-----------RNSRRTDDKLRA----SEAERVA---AEKAR---------------KFLEDELAKLQASFQKSS 707
Cdd:pfam05557 162 QSSLAeaeqrikelefEIQSQEQDSEIVknskSELARIPeleKELERlrehnkhlnenienkLLLKEEVEDLKRKLEREE 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 708 TDDAR---------KLRDEMDEHTNSIQ---------EEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYN 769
Cdd:pfam05557 242 KYREEaatlelekeKLEQELQSWVKLAQdtglnlrspEDLSRRIEQLQQREIVLKEENSSLTSSARQLEKARRELEQELA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 770 STQRRIEEKETQIRYSDDIRRNIQKDL-------DDLR---EKYDRVHTDNEKILGELEHAQKAAHLAEQ---QLKEIKI 836
Cdd:pfam05557 322 QYLKKIEDLNKKLKRHKALVRRLQRRVllltkerDGYRailESYDKELTMSNYSPQLLERIEEAEDMTQKmqaHNEEMEA 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 837 QRDdyqkQKDEHARHLFDIRHKLETEIKG--RQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGH--Q 912
Cdd:pfam05557 402 QLS----VAEEELGGYKQQAQTLERELQAlrQQESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELERRclQ 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 913 GKITHLENE-LHSRSGEIeklndlnqrlQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDA 991
Cdd:pfam05557 478 GDYDPKKTKvLHLSMNPA----------AEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLD 547
|
570
....*....|....*..
gi 1767287505 992 ANQQLSRANLLNKELED 1008
Cdd:pfam05557 548 LRKELESAELKNQRLKE 564
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
518-793 |
4.30e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.93 E-value: 4.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 518 EESIERNIeLESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRtrslspgktplppsea 597
Cdd:TIGR02169 781 LNDLEARL-SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRI---------------- 843
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 598 lravrntfrnkDNDIQQLERKLKIAESQVK--EFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERnsrrtddKL 675
Cdd:TIGR02169 844 -----------DLKEQIKSIEKEIENLNGKkeELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER-------KI 905
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 676 RASEAERvaaEKARKFLEDELAKLQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSE-- 753
Cdd:TIGR02169 906 EELEAQI---EKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEye 982
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1767287505 754 -----VNPLKDKYRDLENEYNSTQRRIEEKETQIRYS-----DDIRRNIQ 793
Cdd:TIGR02169 983 evlkrLDELKEKRAKLEEERKAILERIEEYEKKKREVfmeafEAINENFN 1032
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
491-970 |
4.33e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 58.63 E-value: 4.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 491 LEELRKIRGGGSSEGDAELhKELMTKYEESIERNIELEsrgdDSQRKIAELEAELRRNREKLNEAQGALKKLhEMAQDSE 570
Cdd:COG4717 55 ADELFKPQGRKPELNLKEL-KELEEELKEAEEKEEEYA----ELQEELEELEEELEELEAELEELREELEKL-EKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 571 KNVDGTVSIKRTRSLSPGKTplppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEAR-RRLDKQFAD 649
Cdd:COG4717 129 PLYQELEALEAELAELPERL-----EELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEELEE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 650 AKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSstddARKLRDEMDEHTNSIQEEF 729
Cdd:COG4717 204 LQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLA----LLGLGGSLLSLILTIAGVL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 730 KTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTD 809
Cdd:COG4717 280 FLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEEL 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 810 NEKILGELEHAQKAAHLAEQQLKEIK--IQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGarnndELDKLRQTI 887
Cdd:COG4717 360 EEELQLEELEQEIAALLAEAGVEDEEelRAALEQAEEYQELKEELEELEEQLEELLGELEELLEAL-----DEEELEEEL 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 888 SDYESQINLLRRHNDELDTTIKGHQGKITHLENelhsrSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKL 967
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEE-----DGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEY 509
|
...
gi 1767287505 968 ENE 970
Cdd:COG4717 510 REE 512
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
793-1583 |
4.37e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.79 E-value: 4.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 793 QKDLDDLREKYDRVhtdnEKILGELEhaqkaahlaeQQLKEIKIQRDD---YQKQKDE----HARHLFDIRHKLETEIkg 865
Cdd:COG1196 178 ERKLEATEENLERL----EDILGELE----------RQLEPLERQAEKaerYRELKEElkelEAELLLLKLRELEAEL-- 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 866 rQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQD 945
Cdd:COG1196 242 -EELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 946 ILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQ 1025
Cdd:COG1196 321 LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1026 DIRDLKERLANIgkggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpaaediesrgggeidipssgdvihgrd 1105
Cdd:COG1196 401 QLEELEEAEEAL-------------------------------------------------------------------- 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1106 grdgrdagnrgthtitntKERIERIEKNILDRyhddelvehkirevndrwKRELERLENEKDDLERRIRELEDELSQIGR 1185
Cdd:COG1196 413 ------------------LERLERLEEELEEL------------------EEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1186 GNDKTENDITELKRK---HAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAvenlksvEDDLRDKLNNLEKQLADSLNRE 1262
Cdd:COG1196 457 EEEALLELLAELLEEaalLEAALAELLEELAEAAARLLLLLEAEADYEGFL-------EGVKAALLLAGLRGLAGAVAVL 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1263 NELEREKRDYDEKINSLYGQNQKIKDEWDdfrndADKEIQKWKTDaytvRSEAKALETTNTALKAQLQAANDRIDHLTKT 1342
Cdd:COG1196 530 IGVEAAYEAALEAALAAALQNIVVEDDEV-----AAAAIEYLKAA----KAGRATFLPLDKIRARAALAAALARGAIGAA 600
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1343 VNDHTSKVRDLTSQVRHLEDELADTkgNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGEL--DAALRENDILKSNN 1420
Cdd:COG1196 601 VDLVASDLREADARYYVLGDTLLGR--TLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLtgGSRRELLAALLEAE 678
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1421 TNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITS 1500
Cdd:COG1196 679 AELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPE 758
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1501 DTERNALRNELQKLSQELK-FG--NeqiqrksdeyqttiddlahshrvsedsrLNALQELEARKYEINDLTSRLDSTEQR 1577
Cdd:COG1196 759 PPDLEELERELERLEREIEaLGpvN----------------------------LLAIEEYEELEERYDFLSEQREDLEEA 810
|
....*.
gi 1767287505 1578 LATLQQ 1583
Cdd:COG1196 811 RETLEE 816
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
596-1438 |
6.16e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 58.52 E-value: 6.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 596 EALRAVRNTFRNKDNDIQ---QLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTD 672
Cdd:TIGR00606 189 ETLRQVRQTQGQKVQEHQmelKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLD 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 673 DKLRASEAERVAAEKARKFLEDELAKLqasFQKSstddarklrdemDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKS 752
Cdd:TIGR00606 269 NEIKALKSRKKQMEKDNSELELKMEKV---FQGT------------DEQLNDLYHNHQRTVREKERELVDCQRELEKLNK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 753 EVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQ--KDLDDL-REKYDRVHTDNE---KILGELEHAQKAAHL 826
Cdd:TIGR00606 334 ERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLAtrLELDGFeRGPFSERQIKNFhtlVIERQEDEAKTAAQL 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 827 -AEQQLKEIKIQR--DDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGAR---NNDELDKLRQTISDYESQINLLrrh 900
Cdd:TIGR00606 414 cADLQSKERLKQEqaDEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQlegSSDRILELDQELRKAERELSKA--- 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 901 ndELDTTIKGHQGKITHLENE----LHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIR----------- 965
Cdd:TIGR00606 491 --EKNSLTETLKKEVKSLQNEkadlDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRhsdeltsllgy 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 966 -----KLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELED-TKQDLKHSTDV-----NKQLEQDIRDLKERL 1034
Cdd:TIGR00606 569 fpnkkQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESkEEQLSSYEDKLfdvcgSQDEESDLERLKEEI 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1035 ANIGKGGRISRDSTTGTDG--GAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEID-IPSSGDVIHGRDGRDGRD 1111
Cdd:TIGR00606 649 EKSSKQRAMLAGATAVYSQfiTQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDkLKSTESELKKKEKRRDEM 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1112 AG---------NRGTHTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRE---------LERLENEKDDLERRI 1173
Cdd:TIGR00606 729 LGlapgrqsiiDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAkvcltdvtiMERFQMELKDVERKI 808
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1174 RELEDELSqiGRGNDKTENDITELKRKHAAEIDKLKSDISALH-------------DKHLSDLDDEKEQYGKAVENLKSV 1240
Cdd:TIGR00606 809 AQQAAKLQ--GSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRkliqdqqeqiqhlKSKTNELKSEKLQIGTNLQRRQQF 886
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1241 EDDLRDK---LNNLEKQLADSLNRENELEREKRDY----DEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRS 1313
Cdd:TIGR00606 887 EEQLVELsteVQSLIREIKDAKEQDSPLETFLEKDqqekEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQD 966
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1314 ----EAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLE 1389
Cdd:TIGR00606 967 gkddYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQ 1046
|
890 900 910 920
....*....|....*....|....*....|....*....|....*....
gi 1767287505 1390 DQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAE 1438
Cdd:TIGR00606 1047 MQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQ 1095
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1324-1470 |
8.69e-08 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 55.32 E-value: 8.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1324 ALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSdaNKwr 1403
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRN--NK-- 89
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 1404 gELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQAD 1470
Cdd:COG1579 90 -EYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELE 155
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1774-2218 |
8.84e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 58.00 E-value: 8.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1774 ETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTD 1853
Cdd:COG4913 224 FEAADALVEHFDDLERAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAE 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1854 LDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDT-NKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTD 1932
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFA 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1933 KLRRDLTKAESVENELRKTIdiqsktsheyqllkdqllntQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVS 2012
Cdd:COG4913 384 ALRAEAAALLEALEEELEAL--------------------EEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2013 ELQRQLQDAnTEKNRVEDRFL---------------SVEKVVNTMRTT----------------ETDLRQQLETAKNEKR 2061
Cdd:COG4913 444 ALRDALAEA-LGLDEAELPFVgelievrpeeerwrgAIERVLGGFALTllvppehyaaalrwvnRLHLRGRLVYERVRTG 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2062 VATKELED--------------------LKRRLA------------QLENERRN---SSQLSDGW----KKEKITLL--- 2099
Cdd:COG4913 523 LPDPERPRldpdslagkldfkphpfrawLEAELGrrfdyvcvdspeELRRHPRAitrAGQVKGNGtrheKDDRRRIRsry 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2100 -------KKIELLENEKRRTDAAIRETALQREAIEKSLNAMEREnKELYKNCAQLQQQIAQ---------------LEME 2157
Cdd:COG4913 603 vlgfdnrAKLAALEAELAELEEELAEAEERLEALEAELDALQER-REALQRLAEYSWDEIDvasaereiaeleaelERLD 681
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 2158 NGNRILELTNKQREEQERQLIRMRQEKGQIEKvienRERTHRNRIKQLEDQIAILRDQLDG 2218
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEELDELKG----EIGRLEKELEQAEEELDELQDRLEA 738
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
610-1024 |
1.07e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 57.42 E-value: 1.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 610 NDIQQLERKLKIAESQVKEFLNK--------------FENADEARRRLDKQFADAKREISNL--QKSVDEAERNSRRTDD 673
Cdd:pfam05483 268 DKANQLEEKTKLQDENLKELIEKkdhltkeledikmsLQRSMSTQKALEEDLQIATKTICQLteEKEAQMEELNKAKAAH 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 674 KLRASE--------AERVAAEKAR-KFLEDELAKLQASFQKSSTDdarklRDEMDEHTNSIQ---EEFKTRIDElnrrVE 741
Cdd:pfam05483 348 SFVVTEfeattcslEELLRTEQQRlEKNEDQLKIITMELQKKSSE-----LEEMTKFKNNKEvelEELKKILAE----DE 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 742 NLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGE----L 817
Cdd:pfam05483 419 KLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHcdklL 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 818 EHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLL 897
Cdd:pfam05483 499 LENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSI 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 898 RRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKeKQDILNQKLkldgdvQALKETIRKLENELEKLRNE 977
Cdd:pfam05483 579 EYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKK-KGSAENKQL------NAYEIKVNKLELELASAKQK 651
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1767287505 978 NKELVgkEARARDAANQQLSRANLLnKELEDTKQDLKHSTDVNKQLE 1024
Cdd:pfam05483 652 FEEII--DNYQKEIEDKKISEEKLL-EEVEKAKAIADEAVKLQKEID 695
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
823-1055 |
1.11e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.70 E-value: 1.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 823 AAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHND 902
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 903 ELDTTIKGHQGKITHLENELHsRSGEIEKLNDLNQrlQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELV 982
Cdd:COG4942 94 ELRAELEAQKEELAELLRALY-RLGRQPPLALLLS--PEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 983 GKEARARDAANQQLSRANLLNKE-------LEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGA 1055
Cdd:COG4942 171 AERAELEALLAELEEERAALEALkaerqklLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAA 250
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
614-1032 |
1.37e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 57.04 E-value: 1.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 614 QLERKLKIAESQVK------EFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEK 687
Cdd:pfam05483 210 RLEMHFKLKEDHEKiqhleeEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 688 ARKFLEDELAKLQASFQKSSTDDaRKLRDEMDEHTNSI---QEEFKTRIDELNR-----------------RVENLLR-E 746
Cdd:pfam05483 290 KKDHLTKELEDIKMSLQRSMSTQ-KALEEDLQIATKTIcqlTEEKEAQMEELNKakaahsfvvtefeattcSLEELLRtE 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 747 NNRLKSEVNPLKDKYRDLE---NEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD---LREKYDRVHTDNEKILGELEHA 820
Cdd:pfam05483 369 QQRLEKNEDQLKIITMELQkksSELEEMTKFKNNKEVELEELKKILAEDEKLLDEkkqFEKIAEELKGKEQELIFLLQAR 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 821 QKAAHLAEQQLKEIKIQRDDYQKQKDeharhlfDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISD-------YESQ 893
Cdd:pfam05483 449 EKEIHDLEIQLTAIKTSEEHYLKEVE-------DLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDmtlelkkHQED 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 894 INLLRRHNDELDTTIKGHQGKITHLENELHS-RSGEIEKLNDLNQRLQKEKQDILN----------QKLKLDGDVQALKE 962
Cdd:pfam05483 522 IINCKKQEERMLKQIENLEEKEMNLRDELESvREEFIQKGDEVKCKLDKSEENARSieyevlkkekQMKILENKCNNLKK 601
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 963 TIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDvNKQLEQDIRDLKE 1032
Cdd:pfam05483 602 QIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIID-NYQKEIEDKKISE 670
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
636-893 |
1.67e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.93 E-value: 1.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 636 ADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQAsfqksstdDARKLR 715
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA--------ELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 716 DEMDEhtnsIQEEFKTRIDELNRRVENLLR--ENNRLKSEVNPlkdkyrdleNEYNSTQRRieeketqIRYSDDIRRNIQ 793
Cdd:COG4942 90 KEIAE----LRAELEAQKEELAELLRALYRlgRQPPLALLLSP---------EDFLDAVRR-------LQYLKYLAPARR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 794 KDLDDLREKYDRVHTDNEKIlgELEHAQKAAHLAEQQlkeikIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNG 873
Cdd:COG4942 150 EQAEELRADLAELAALRAEL--EAERAELEALLAELE-----EERAALEALKAERQKLLARLEKELAELAAELAELQQEA 222
|
250 260
....*....|....*....|
gi 1767287505 874 ARNNDELDKLRQTISDYESQ 893
Cdd:COG4942 223 EELEALIARLEAEAAAAAER 242
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
784-1533 |
1.69e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 56.65 E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 784 YSDDIRRNIQKDLDDLREKYDRVHTDNEKILG-----ELEHAQKAAHLAEQQlKEIKIQRDDYQKQKDEHARhlfdIRHK 858
Cdd:pfam05483 61 YQEGLKDSDFENSEGLSRLYSKLYKEAEKIKKwkvsiEAELKQKENKLQENR-KIIEAQRKAIQELQFENEK----VSLK 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 859 LETEIKGRQDLEKNGARNNDELDKLRQT-------ISDYESQINLLRR----HNDELDTTIKGHQGKITHLEN---ELHS 924
Cdd:pfam05483 136 LEEEIQENKDLIKENNATRHLCNLLKETcarsaekTKKYEYEREETRQvymdLNNNIEKMILAFEELRVQAENarlEMHF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 925 RSGE-IEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLN 1003
Cdd:pfam05483 216 KLKEdHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLT 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1004 KELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggrisrdsttgtdggafgDRSSVADPSRTRGAAGSTVFVPAaed 1083
Cdd:pfam05483 296 KELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTE------------------EKEAQMEELNKAKAAHSFVVTEF--- 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1084 iesrgggEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEHKirevndRWKRELERLE 1163
Cdd:pfam05483 355 -------EATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELK------KILAEDEKLL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1164 NEKDDLERRIREL---EDELSQIGRGNDKTEND-------ITELKRKHAAEIDKLKSDisaLHDKHLSDLDDEKEQYGKA 1233
Cdd:pfam05483 422 DEKKQFEKIAEELkgkEQELIFLLQAREKEIHDleiqltaIKTSEEHYLKEVEDLKTE---LEKEKLKNIELTAHCDKLL 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1234 VENlKSVEDDLRDKLNNLEKQLADSLNRENELEREKRdydeKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRS 1313
Cdd:pfam05483 499 LEN-KELTQEASDMTLELKKHQEDIINCKKQEERMLK----QIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEE 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1314 EAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLtsqvrHLEDELADTKGNLVQKEMDLESTQNRLRSLEdqhs 1393
Cdd:pfam05483 574 NARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEEL-----HQENKALKKKGSAENKQLNAYEIKVNKLELE---- 644
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1394 tLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEkerlQNAFREKTKQadHLN 1473
Cdd:pfam05483 645 -LASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAE----MVALMEKHKH--QYD 717
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1474 QLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ 1533
Cdd:pfam05483 718 KIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAK 777
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
775-1121 |
1.88e-07 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 55.99 E-value: 1.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 775 IEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFd 854
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY- 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 855 irhkleteikgrqdleKNGaRNNDELDKL--RQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKL 932
Cdd:COG3883 97 ----------------RSG-GSVSYLDVLlgSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAEL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 933 NDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQD 1012
Cdd:COG3883 160 EALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1013 LKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEI 1092
Cdd:COG3883 240 AAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGSGGGSGGAGGVGSGGGA 319
|
330 340
....*....|....*....|....*....
gi 1767287505 1093 DIPSSGDVIHGRDGRDGRDAGNRGTHTIT 1121
Cdd:COG3883 320 GAVVGGASAGGGGGSGGGGGSSGGGSGGG 348
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1903-2083 |
1.97e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.31 E-value: 1.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1903 RQILTEKI-KELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELN---- 1977
Cdd:COG4717 44 RAMLLERLeKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEklek 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1978 -----GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRF----LSVEKVVNTMRTTETD 2048
Cdd:COG4717 124 llqllPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLeqlsLATEEELQDLAEELEE 203
|
170 180 190
....*....|....*....|....*....|....*
gi 1767287505 2049 LRQQLETAKNEKRVATKELEDLKRRLAQLENERRN 2083
Cdd:COG4717 204 LQQRLAELEEELEEAQEELEELEEELEQLENELEA 238
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1158-1591 |
1.99e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.59 E-value: 1.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1158 ELERLENEKDDLERRIRELEDELSQ----IGRGNDKTEN---DITEL------KRKHAAEIDK-LKSDISALHDKH--LS 1221
Cdd:PRK02224 308 DAEAVEARREELEDRDEELRDRLEEcrvaAQAHNEEAESlreDADDLeeraeeLREEAAELESeLEEAREAVEDRReeIE 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1222 DLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINslygQNQKIKDEWDDFRNDADKEI 1301
Cdd:PRK02224 388 ELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVE----EAEALLEAGKCPECGQPVEG 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1302 QKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVndhtskvrDLTSQVRHLEDELADTKGNLVQKEMDLEST 1381
Cdd:PRK02224 464 SPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLV--------EAEDRIERLEERREDLEELIAERRETIEEK 535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1382 QNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLksaeDALKELKNSLSHAKTEKERLQNa 1461
Cdd:PRK02224 536 RERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI----ESLERIRTLLAAIADAEDEIER- 610
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1462 FREKTKQADHLNQlasQFDTKLTKLRNELQDTNDKLitsDTER-NALRNELQKLSQELkfgnEQIQRKSDEYQTTIDDLA 1540
Cdd:PRK02224 611 LREKREALAELND---ERRERLAEKRERKRELEAEF---DEARiEEAREDKERAEEYL----EQVEEKLDELREERDDLQ 680
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 1541 HSHRVSEDSrLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSE 1591
Cdd:PRK02224 681 AEIGAVENE-LEELEELRERREALENRVEALEALYDEAEELESMYGDLRAE 730
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
728-1501 |
1.99e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 56.98 E-value: 1.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 728 EFKTRIDELNRRVENLLRENNRLKSevnpLKDKYRDLENEYNSTQRRIEEkeTQIRYSDDIRRNIQKDldDLREKYDRVH 807
Cdd:TIGR01612 386 EFLEEIKKIAKQRAIFFYNAKKLKH----LEILYKHQEDILNNFHKTIER--LIFEKPDPNNNNIFKD--DFDEFNKPIP 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 808 TDNEKILgelehAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNgarnnDELDKLRQTI 887
Cdd:TIGR01612 458 KSKLKAL-----EKRFFEIFEEEWGSYDIKKDIDENSKQDNTVKLILMRMKDFKDIIDFMELYKP-----DEVPSKNIIG 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 888 SDYESQINLLRRhnDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKL 967
Cdd:TIGR01612 528 FDIDQNIKAKLY--KEIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDDEIIYINKLKLEL 605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 968 ENELEKLRNENKEL-----VGKEARARDAANQQLSRANLLNKELEDTKQDLKHST---DVNKQLEQDIRDLKERLANIGK 1039
Cdd:TIGR01612 606 KEKIKNISDKNEYIkkaidLKKIIENNNAYIDELAKISPYQVPEHLKNKDKIYSTiksELSKIYEDDIDALYNELSSIVK 685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1040 GGRIsrDSTTgtDGGAFGDRSSVADPSRTRGAAGSTVFVPA-AEDIESRGGGEID-IPSSGDVIHGrdgrdgrDAGNRGT 1117
Cdd:TIGR01612 686 ENAI--DNTE--DKAKLDDLKSKIDKEYDKIQNMETATVELhLSNIENKKNELLDiIVEIKKHIHG-------EINKDLN 754
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1118 HTITNTKERIERIEKNILD-RYHDDEL--VEHKIREVNDRWKRELErLENEKDDLERRIRELEDELSQ-IGRGNDKTEND 1193
Cdd:TIGR01612 755 KILEDFKNKEKELSNKINDyAKEKDELnkYKSKISEIKNHYNDQIN-IDNIKDEDAKQNYDKSKEYIKtISIKEDEIFKI 833
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1194 ITELKRKHAAEIDKLKSDISaLHDKHLSDLDDEKEQYGKAVENLKSVEDDlrDKLNNLEKQLADSLNRENELEREKRDYD 1273
Cdd:TIGR01612 834 INEMKFMKDDFLNKVDKFIN-FENNCKEKIDSEHEQFAELTNKIKAEISD--DKLNDYEKKFNDSKSLINEINKSIEEEY 910
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1274 EKINSLYGQNQKIK------DEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTK--TVND 1345
Cdd:TIGR01612 911 QNINTLKKVDEYIKicentkESIEKFHNKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKAFKdaSLND 990
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1346 HTSKVRDLTSQVRHLEDELADTKGNLVQKEMD--LESTQNRLRSLEDQ-----------HSTLQSDANKWRGEL--DAAL 1410
Cdd:TIGR01612 991 YEAKNNELIKYFNDLKANLGKNKENMLYHQFDekEKATNDIEQKIEDAnknipnieiaiHTSIYNIIDEIEKEIgkNIEL 1070
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1411 RENDILKSNNTNMeTDLTRLKNRLK-------------SAEDALKELKNSLSHAKTEKERLQNAFRE-KTKQADHLNQLA 1476
Cdd:TIGR01612 1071 LNKEILEEAEINI-TNFNEIKEKLKhynfddfgkeeniKYADEINKIKDDIKNLDQKIDHHIKALEEiKKKSENYIDEIK 1149
|
810 820
....*....|....*....|....*
gi 1767287505 1477 SQFdtkltklrNELQDTNDKLITSD 1501
Cdd:TIGR01612 1150 AQI--------NDLEDVADKAISND 1166
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
504-970 |
2.07e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 2.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 504 EGDAELHKELMTKYEESIERnieLESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTR 583
Cdd:COG1196 301 EQDIARLEERRRELEERLEE---LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 584 SlspgktplppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDE 663
Cdd:COG1196 378 E-----------EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 664 AERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSST----------------------------------- 708
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAArllllleaeadyegflegvkaalllaglrglagav 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 709 ----DDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENN--------------RLKSEVNPLKDKYRDLENEYNS 770
Cdd:COG1196 527 avliGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKagratflpldkiraRAALAAALARGAIGAAVDLVAS 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 771 TQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHAR 850
Cdd:COG1196 607 DLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 851 HLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQG-----------KITHLE 919
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEeealeelpeppDLEELE 766
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 920 NELHSRSGEIEKLNDLN-------QRLQKEKQDILNQKLKLDGDVQALKETIRKLENE 970
Cdd:COG1196 767 RELERLEREIEALGPVNllaieeyEELEERYDFLSEQREDLEEARETLEEAIEEIDRE 824
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1139-2083 |
2.16e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 56.52 E-value: 2.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1139 HDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELsqigrgndktenDITELKRKHAAEIDKLKSDIsalhdk 1218
Cdd:pfam02463 158 IEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQE------------LKLKEQAKKALEYYQLKEKL------ 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1219 hlsdldDEKEQYGKAVENLKSVED--DLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRND 1296
Cdd:pfam02463 220 ------ELEEEYLLYLDYLKLNEEriDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1297 ADKEiqkwktdaytVRSEAKALETTNTALKAQLQAANDRIDHLTKtvndHTSKVRDLTSQVRHLEDELADTKGNLVQKEM 1376
Cdd:pfam02463 294 EEEE----------LKSELLKLERRKVDDEEKLKESEKEKKKAEK----ELKKEKEEIEELEKELKELEIKREAEEEEEE 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1377 DLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKsaEDALKELKNSLSHAKTEKE 1456
Cdd:pfam02463 360 ELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLE--DLLKEEKKEELEILEEEEE 437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1457 RLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLsQELKFGNEQIQRKSDEYQTTI 1536
Cdd:pfam02463 438 SIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKL-EERSQKESKARSGLKVLLALI 516
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1537 DDLAHSHRVSEDSRLNALQELEArkyeiNDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSsaNRVINFHTFV 1616
Cdd:pfam02463 517 KDGVGGRIISAHGRLGDLGVAVE-----NYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARK--LRLLIPKLKL 589
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1617 DGGAGYVDGVpggtsvigggpsaqrsgayDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPRSVPFPPSADF 1696
Cdd:pfam02463 590 PLKSIAVLEI-------------------DPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRK 650
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1697 SSGRPGAASAGGRVINNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLarmkkKTTETHTTINQKETR 1776
Cdd:pfam02463 651 GVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKE-----ELKKLKLEAEELLAD 725
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1777 YRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLrtdldn 1856
Cdd:pfam02463 726 RVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQ------ 799
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1857 ahtdIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLqiasfESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRR 1936
Cdd:pfam02463 800 ----EEELRALEEELKEEAELLEEEQLLIEQEEKIKEE-----ELEELALELKEEQKLEKLAEEELERLEEEITKEELLQ 870
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1937 DLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQ--NELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSEL 2014
Cdd:pfam02463 871 ELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQklNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEK 950
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2015 QRQ-LQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRN 2083
Cdd:pfam02463 951 EENnKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLK 1020
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1788-2208 |
2.75e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 56.28 E-value: 2.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1788 EEERRALESRLQSAKTLLRSQ-----EEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTdldnahTDIR 1862
Cdd:pfam15921 244 EDQLEALKSESQNKIELLLQQhqdriEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNS------MYMR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1863 SLRDKEeqwdSSRFQLETKMRESdsdtnkyqlqiasfeseRQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDltkAE 1942
Cdd:pfam15921 318 QLSDLE----STVSQLRSELREA-----------------KRMYEDKIEELEKQLVLANSELTEARTERDQFSQE---SG 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1943 SVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNnrvSELQRQLQdan 2022
Cdd:pfam15921 374 NLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMK---SECQGQME--- 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2023 TEKNRVEDRFLSVEKVvntmrtteTDLRQQLETAKNEKRvatKELEDLKRRLAQLENERRNSSQLSDGwkkekitllkki 2102
Cdd:pfam15921 448 RQMAAIQGKNESLEKV--------SSLTAQLESTKEMLR---KVVEELTAKKMTLESSERTVSDLTAS------------ 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2103 elLENEKRRTDAAIRETALQREAIEKSLNAMER-ENKELYKNCAQLQQQIAQLEMENGNRILELTNKQRE-------EQE 2174
Cdd:pfam15921 505 --LQEKERAIEATNAEITKLRSRVDLKLQELQHlKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIEnmtqlvgQHG 582
|
410 420 430
....*....|....*....|....*....|....
gi 1767287505 2175 RQLIRMRQEKGQIEKVIENReRTHRNRIKQLEDQ 2208
Cdd:pfam15921 583 RTAGAMQVEKAQLEKEINDR-RLELQEFKILKDK 615
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1158-1526 |
3.55e-07 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 55.52 E-value: 3.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1158 ELERLENEKDDLERRIRE----LEDELSQIGRGNDKTENDITELKRKHAAEIDKLKsdisaLHDKHLSDLDDEKEQYGKA 1233
Cdd:pfam05557 87 ALNKKLNEKESQLADAREviscLKNELSELRRQIQRAELELQSTNSELEELQERLD-----LLKAKASEAEQLRQNLEKQ 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1234 VENLKSVEDDLRDKLNNLEKQLADSLNREN---------ELEREK---RDYDEKINSLYGQNQKIKDEWDDFRNDADKEI 1301
Cdd:pfam05557 162 QSSLAEAEQRIKELEFEIQSQEQDSEIVKNskselaripELEKELerlREHNKHLNENIENKLLLKEEVEDLKRKLEREE 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1302 QkwktdaytVRSEAKALETTNTALKAQLQ-----------------AANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDEL 1364
Cdd:pfam05557 242 K--------YREEAATLELEKEKLEQELQswvklaqdtglnlrspeDLSRRIEQLQQREIVLKEENSSLTSSARQLEKAR 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1365 ADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSdankwrgELDAALRENDILKSNNTNMETDLT------RLKNRLKSAE 1438
Cdd:pfam05557 314 RELEQELAQYLKKIEDLNKKLKRHKALVRRLQR-------RVLLLTKERDGYRAILESYDKELTmsnyspQLLERIEEAE 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1439 DALKELKNSLSHAKTekeRLQNAFREKTKQadhlNQLASQFDTKLTKLRNElQDTNDKLITSDtERNALRNELQKLSQEL 1518
Cdd:pfam05557 387 DMTQKMQAHNEEMEA---QLSVAEEELGGY----KQQAQTLERELQALRQQ-ESLADPSYSKE-EVDSLRRKLETLELER 457
|
....*...
gi 1767287505 1519 KFGNEQIQ 1526
Cdd:pfam05557 458 QRLREQKN 465
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1787-2034 |
4.40e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.77 E-value: 4.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1787 AEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLR- 1865
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRa 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1866 DKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFEserqiltekikELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVE 1945
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFL-----------DAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1946 NELRKTIDiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELlnvRSEVRDYKQRVHDVNNRVSELQRQLQDANTEK 2025
Cdd:COG4942 167 AELEAERA-------ELEALLAELEEERAALEALKAERQKLLARL---EKELAELAAELAELQQEAEELEALIARLEAEA 236
|
....*....
gi 1767287505 2026 NRVEDRFLS 2034
Cdd:COG4942 237 AAAAERTPA 245
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1140-1531 |
4.47e-07 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 54.69 E-value: 4.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1140 DDELVEHKIREVNDRWkRELERL-----------ENEKDDLER---RIRELEDELSQIGRGNDKTENDITELKRKHAAei 1205
Cdd:pfam19220 4 RNELLRVRLGEMADRL-EDLRSLkadfsqliepiEAILRELPQaksRLLELEALLAQERAAYGKLRRELAGLTRRLSA-- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1206 dkLKSDISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSlygqnqk 1285
Cdd:pfam19220 81 --AEGELEEL-VARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQA------- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1286 ikdewddfrndADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELA 1365
Cdd:pfam19220 151 -----------AEKALQRAEGELATARERLALLEQENRRLQALSEEQAAELAELTRRLAELETQLDATRARLRALEGQLA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1366 DTKG----NLVQKEMDLESTQNRLRSLEDQHSTLQSDAN---KWRGELDAALREND--ILKSNNTNMETDLTRlknrlKS 1436
Cdd:pfam19220 220 AEQAererAEAQLEEAVEAHRAERASLRMKLEALTARAAateQLLAEARNQLRDRDeaIRAAERRLKEASIER-----DT 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1437 AEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQ 1516
Cdd:pfam19220 295 LERRLAGLEADLERRTQQFQEMQRARAELEERAEMLTKALAAKDAALERAEERIASLSDRIAELTKRFEVERAALEQANR 374
|
410
....*....|....*
gi 1767287505 1517 ELKfgnEQIQRKSDE 1531
Cdd:pfam19220 375 RLK---EELQRERAE 386
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1728-2212 |
4.48e-07 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 55.60 E-value: 4.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1728 IANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTT------INQKETRYRNIEDNLQDAEEERRALESrlqSA 1801
Cdd:pfam10174 187 IAEAEMQLGHLEVLLDQKEKENIHLREELHRRNQLQPDPAKTkalqtvIEMKDTKISSLERNIRDLEDEVQMLKT---NG 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1802 KTLLRSQEEALKQRDEERRQ---MKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNA--HTDI--RSLRDKEE----- 1869
Cdd:pfam10174 264 LLHTEDREEEIKQMEVYKSHskfMKNKIDQLKQELSKKESELLALQTKLETLTNQNSDCkqHIEVlkESLTAKEQraail 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1870 --QWDSSRFQLETKmresDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENE 1947
Cdd:pfam10174 344 qtEVDALRLRLEEK----ESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAG 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1948 LRKTI-DIQSKTSHeyqllKDQLLNTQNELNGANNR-----KQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDA 2021
Cdd:pfam10174 420 LKERVkSLQTDSSN-----TDTALTTLEEALSEKERiierlKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEK 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2022 NTEKN--------------RVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKElEDLKRRLAQLENERRNSSQL 2087
Cdd:pfam10174 495 ESSLIdlkehasslassglKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTN-PEINDRIRLLEQEVARYKEE 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2088 SDGWKKEKITLLKKIELLENEKRRTDAAIRE-------------------TALQREAIEKSLNAME---RENKELYKNCA 2145
Cdd:pfam10174 574 SGKAQAEVERLLGILREVENEKNDKDKKIAElesltlrqmkeqnkkvaniKHGQQEMKKKGAQLLEearRREDNLADNSQ 653
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 2146 QLQQQIAQLEMENGNRILELTnKQR--------EEQERQLIRMRQE-KGQIEKVIENRERTHRNRIKQLEDQIAIL 2212
Cdd:pfam10174 654 QLQLEELMGALEKTRQELDAT-KARlsstqqslAEKDGHLTNLRAErRKQLEEILEMKQEALLAAISEKDANIALL 728
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1741-2193 |
4.64e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.57 E-value: 4.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1741 KIEKLEMERNELRDTLARMKKKTTethttinQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERR 1820
Cdd:pfam01576 132 KIKKLEEDILLLEDQNSKLSKERK-------LLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQ 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1821 QMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFE 1900
Cdd:pfam01576 205 ELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESER 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1901 SERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKtSHEYQL-------------LKD 1967
Cdd:pfam01576 285 AARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETR-SHEAQLqemrqkhtqaleeLTE 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1968 QLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTeknrvedRFLSVEKVVNTMRTTET 2047
Cdd:pfam01576 364 QLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQA-------RLSESERQRAELAEKLS 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2048 DLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIE 2127
Cdd:pfam01576 437 KLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVE 516
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 2128 KSLNAMERENKELYKNCAQLQQQIAQLE--MENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIEN 2193
Cdd:pfam01576 517 RQLSTLQAQLSDMKKKLEEDAGTLEALEegKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDD 584
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1724-2123 |
5.00e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.46 E-value: 5.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1724 GGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQ-KETRYRNIEDNLQDAEEERRALesrLQSAK 1802
Cdd:PRK03918 382 TGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEElKKAKGKCPVCGRELTEEHRKEL---LEEYT 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1803 TLLRSQEEALKQRDEERRQMKSKMVAAE--LQARGKEAQLRHLNEQLKNLRTDLDNahTDIRSLRDKEEQWdssrfqlet 1880
Cdd:PRK03918 459 AELKRIEKELKEIEEKERKLRKELRELEkvLKKESELIKLKELAEQLKELEEKLKK--YNLEELEKKAEEY--------- 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1881 kmRESDSDTNKYQLQIASFESErqilTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA--ESVEnELRKTIDIQSKT 1958
Cdd:PRK03918 528 --EKLKEKLIKLKGEIKSLKKE----LEKLEELKKKLAELEKKLDELEEELAELLKELEELgfESVE-ELEERLKELEPF 600
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1959 SHEYQLLKdqllNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDanTEKNRVEDRFLSVEKV 2038
Cdd:PRK03918 601 YNEYLELK----DAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSE--EEYEELREEYLELSRE 674
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2039 VntmrtteTDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLsdgwkkEKItlLKKIELLENEKRRTDAAIRE 2118
Cdd:PRK03918 675 L-------AGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKL------EKA--LERVEELREKVKKYKALLKE 739
|
....*
gi 1767287505 2119 TALQR 2123
Cdd:PRK03918 740 RALSK 744
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
547-922 |
5.06e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 55.44 E-value: 5.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 547 RNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIK-RTRSLSPGKTPLPPSE------ALRAVRNTFRNKDNDIQQLERKL 619
Cdd:TIGR00606 688 QTEAELQEFISDLQSKLRLAPDKLKSTESELKKKeKRRDEMLGLAPGRQSIidlkekEIPELRNKLQKVNRDIQRLKNDI 767
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 620 KIAESQVKEFLNKFENADEAR------RRLDKQFADAKREI---------SNLQKSVDEAERNSRRTDDKLRASEAErva 684
Cdd:TIGR00606 768 EEQETLLGTIMPEEESAKVCLtdvtimERFQMELKDVERKIaqqaaklqgSDLDRTVQQVNQEKQEKQHELDTVVSK--- 844
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 685 AEKARKFLEDELAKLQAsfQKSSTDDARKLRDEMDEHTNSIQEeFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDL 764
Cdd:TIGR00606 845 IELNRKLIQDQQEQIQH--LKSKTNELKSEKLQIGTNLQRRQQ-FEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKD 921
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 765 ENEynsTQRRIEEKETQIRYSDDIRRNIQKDLDDLR------EKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQR 838
Cdd:TIGR00606 922 QQE---KEELISSKETSNKKAQDKVNDIKEKVKNIHgymkdiENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINE 998
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 839 DDYQKQKDEHARHLFD-------IRHKLETEIKGRQDLEKN--GARNNDELDKLRQTISDYESQINLLRRHNDELDTTIK 909
Cdd:TIGR00606 999 DMRLMRQDIDTQKIQErwlqdnlTLRKRENELKEVEEELKQhlKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQK 1078
|
410
....*....|...
gi 1767287505 910 GHQGKITHLENEL 922
Cdd:TIGR00606 1079 GYEKEIKHFKKEL 1091
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
470-863 |
5.21e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.46 E-value: 5.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 470 IETIKRMNGTGGAGSASSADLLEELRKIRGGG---SSEGDAELHKELMTKYEESIERnieLESRGDDSQRKIAELEAELR 546
Cdd:PRK03918 407 ISKITARIGELKKEIKELKKAIEELKKAKGKCpvcGRELTEEHRKELLEEYTAELKR---IEKELKEIEEKERKLRKELR 483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 547 RNREKLNEaQGALKKLHEMAqDSEKNVDGTVSIKRTRSLSPGktplppSEALRAVRNTFRNKDNDIQQLERKLKiaesQV 626
Cdd:PRK03918 484 ELEKVLKK-ESELIKLKELA-EQLKELEEKLKKYNLEELEKK------AEEYEKLKEKLIKLKGEIKSLKKELE----KL 551
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 627 KEFLNKFENADEARRRLDKQFADAKREISNLQ-KSVDEAERNSRRtddkLRASEAERVAAEKARKFLEDELAKLQasfqk 705
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKE----LEPFYNEYLELKDAEKELEREEKELK----- 622
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 706 sstddarKLRDEMDEHTNSIQEEFKtRIDELNRRVENLLRENNrlksevnplKDKYRDLENEYNSTQRRIEEKETQIRYS 785
Cdd:PRK03918 623 -------KLEEELDKAFEELAETEK-RLEELRKELEELEKKYS---------EEEYEELREEYLELSRELAGLRAELEEL 685
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 786 DDIRRNIQKDLDDLREKydrvhtdnekiLGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEI 863
Cdd:PRK03918 686 EKRREEIKKTLEKLKEE-----------LEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVGEIASEI 752
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
731-899 |
5.88e-07 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 53.00 E-value: 5.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 731 TRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIrysDDIRRNIQKDlddlREKYDRVHTDN 810
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEI---EEVEARIKKY----EEQLGNVRNNK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 811 E--KILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEikgRQDLEKNGARNNDELDKLRQTIS 888
Cdd:COG1579 90 EyeALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEK---KAELDEELAELEAELEELEAERE 166
|
170
....*....|...
gi 1767287505 889 DYESQI--NLLRR 899
Cdd:COG1579 167 ELAAKIppELLAL 179
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1784-2007 |
7.36e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.92 E-value: 7.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1784 LQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERR--QMKSKMVAAELQARGKEAQLRHLNEQLKnlrtDLDNAHTDI 1861
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREalQRLAEYSWDEIDVASAEREIAELEAELE----RLDASSDDL 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1862 RSLRDKEEQWdssrfqletkmresdsdtnkyqlqiasfESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA 1941
Cdd:COG4913 688 AALEEQLEEL----------------------------EAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAA 739
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 1942 ES-VENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSE-VRDYKQRVHDV 2007
Cdd:COG4913 740 EDlARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAfNREWPAETADL 807
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
326-1005 |
8.88e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.76 E-value: 8.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 326 EERRRSDEYRMQWENERQKSLSLED--ENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRK 403
Cdd:PTZ00121 1312 EEAKKADEAKKKAEEAKKKADAAKKkaEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK 1391
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 404 QFSDLKTHTEEDldKQKAEFTR----AIRNVNNISRNAAFSAGAGDglglygLEDGGDVNRTTNNYEKVFIETIKRMNGT 479
Cdd:PTZ00121 1392 KADEAKKKAEED--KKKADELKkaaaAKKKADEAKKKAEEKKKADE------AKKKAEEAKKADEAKKKAEEAKKAEEAK 1463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 480 GGAGSASSADLL----EELRKIRGGGSSEGDAELHKELMTKYEESIERNIEL----ESRGDDSQRKIAEL-EAELRRNRE 550
Cdd:PTZ00121 1464 KKAEEAKKADEAkkkaEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAkkaeEAKKADEAKKAEEAkKADEAKKAE 1543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 551 KLNEAQgALKKLHEMAQDSE-KNVDGTVSIKRTRSLSPGKTP-LPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVK- 627
Cdd:PTZ00121 1544 EKKKAD-ELKKAEELKKAEEkKKAEEAKKAEEDKNMALRKAEeAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKa 1622
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 628 EFLNKFENADEARRRLDKQFADAKREISNLQKsvdEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSs 707
Cdd:PTZ00121 1623 EELKKAEEEKKKVEQLKKKEAEEKKKAEELKK---AEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEA- 1698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 708 tDDARKLrdemdehtnsiqEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRdlENEYNSTQRRIEEKEtqirysdd 787
Cdd:PTZ00121 1699 -EEAKKA------------EELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAE--EDKKKAEEAKKDEEE-------- 1755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 788 iRRNIQKDLDDLREKYDRVHTDNEKILGE--LEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKG 865
Cdd:PTZ00121 1756 -KKKIAHLKKEEEKKAEEIRKEKEAVIEEelDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKE 1834
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 866 RQD-----------LEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHsrsgeieklnd 934
Cdd:PTZ00121 1835 VADsknmqleeadaFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEREIP----------- 1903
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 935 lNQRLQKEKQDILNQKLKLDgdvQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKE 1005
Cdd:PTZ00121 1904 -NNNMAGKNNDIIDDKLDKD---EYIKRDAEETREEIIKISKKDMCINDFSSKFCDYMKDNISSGNCSDEE 1970
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1729-2206 |
9.26e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 54.74 E-value: 9.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1729 ANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINqketryrNIEDNLQDAEEERRALESRLQSAKTllrsq 1808
Cdd:pfam15921 373 GNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITID-------HLRRELDDRNMEVQRLEALLKAMKS----- 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1809 eealkqrdEERRQMKSKMVAAElqarGKEAQLrhlnEQLKNLRTDLDNAHtdiRSLRDKEEQWDSSRFQLETKMRESDSD 1888
Cdd:pfam15921 441 --------ECQGQMERQMAAIQ----GKNESL----EKVSSLTAQLESTK---EMLRKVVEELTAKKMTLESSERTVSDL 501
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1889 TNKYQlqiasfESERQI--LTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELrktidiqSKTSHEYQLLK 1966
Cdd:pfam15921 502 TASLQ------EKERAIeaTNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQM-------AEKDKVIEILR 568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1967 DQLLNtQNELNGANNR--------KQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKV 2038
Cdd:pfam15921 569 QQIEN-MTQLVGQHGRtagamqveKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRA 647
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2039 VNTMRTTETDLRQQLETAKNEKRVATKELEDLKRrlaqleNERRNSSQLSDGWKKEKITL---LKKIELLENEKRRTDAA 2115
Cdd:pfam15921 648 VKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKR------NFRNKSEEMETTTNKLKMQLksaQSELEQTRNTLKSMEGS 721
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2116 IRETALQREAIEKSLNAMERENKELykncaQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIE---KVIE 2192
Cdd:pfam15921 722 DGHAMKVAMGMQKQITAKRGQIDAL-----QSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAgelEVLR 796
|
490
....*....|....
gi 1767287505 2193 NRERTHRNRIKQLE 2206
Cdd:pfam15921 797 SQERRLKEKVANME 810
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1251-1559 |
9.27e-07 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 54.13 E-value: 9.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1251 LEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQ 1330
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1331 AANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAAL 1410
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLS 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1411 RENDILKSNNTNMET-------DLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFD--- 1480
Cdd:pfam07888 192 KEFQELRNSLAQRDTqvlqlqdTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDrtq 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1481 TKLTKLRNELQDTNDKLITSD-----------TERNALRN-------ELQKLSQELKFGNEQIQRKSDEYQTTIDDLAH- 1541
Cdd:pfam07888 272 AELHQARLQAAQLTLQLADASlalregrarwaQERETLQQsaeadkdRIEKLSAELQRLEERLQEERMEREKLEVELGRe 351
|
330 340
....*....|....*....|
gi 1767287505 1542 --SHRVSEDSRLNALQELEA 1559
Cdd:pfam07888 352 kdCNRVQLSESRRELQELKA 371
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1778-1987 |
9.90e-07 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 54.25 E-value: 9.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1778 RNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALkqrdeERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNA 1857
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAAL-----EEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1858 HTDIRSLRDKEEQWDSSRFQLetkmrESDSDTNKYQLQIASFESERQILT--------------EKIKELDGALR-LSDS 1922
Cdd:COG3206 239 EARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELAELSarytpnhpdvialrAQIAALRAQLQqEAQR 313
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1923 KVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE 1987
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1160-2139 |
1.03e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 54.28 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1160 ERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKrKHAAEIDKLKSDISALHDKHLSDLDDE-KEQYGKAVENLK 1238
Cdd:TIGR00606 241 KSYENELDPLKNRLKEIEHNLSKI----MKLDNEIKALK-SRKKQMEKDNSELELKMEKVFQGTDEQlNDLYHNHQRTVR 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1239 SVEDDLRDKLNNLEKqladsLNRE-NELEREKRDYDEKINSLYGQNQKIKDEWDDFrndaDKEIQKWKTdaytvRSEAKA 1317
Cdd:TIGR00606 316 EKERELVDCQRELEK-----LNKErRLLNQEKTELLVEQGRLQLQADRHQEHIRAR----DSLIQSLAT-----RLELDG 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1318 LE-------TTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLED 1390
Cdd:TIGR00606 382 FErgpfserQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIK 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1391 QHSTLQSDANKWRgELDAALRENDI---LKSNNTNMETDLTRLKNRLKSAEDALKELKN------SLSHAKTEKERLQNA 1461
Cdd:TIGR00606 462 ELQQLEGSSDRIL-ELDQELRKAERelsKAEKNSLTETLKKEVKSLQNEKADLDRKLRKldqemeQLNHHTTTRTQMEML 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1462 FREKTKQADHLNQLASQFDTKLTKLrneLQDTNDKLITSDTernalrneLQKLSQELKFGNEQIQRKSDEYQtTIDDLAH 1541
Cdd:TIGR00606 541 TKDKMDKDEQIRKIKSRHSDELTSL---LGYFPNKKQLEDW--------LHSKSKEINQTRDRLAKLNKELA-SLEQNKN 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1542 SHRVSEDSRLNALQELEARKYEIndltSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSsanrvinfhtfvdggag 1621
Cdd:TIGR00606 609 HINNELESKEEQLSSYEDKLFDV----CGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQ----------------- 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1622 YVDGVPGGTSviGGGPSAQRsgaydpssggvigsgisggpggsDFGREIEIGRGDSDQSDVAypRSVPfppsadfssgrp 1701
Cdd:TIGR00606 668 FITQLTDENQ--SCCPVCQR-----------------------VFQTEAELQEFISDLQSKL--RLAP------------ 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1702 gaasaggrviNNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIE 1781
Cdd:TIGR00606 709 ----------DKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIM 778
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1782 DNLQDAEEerralesrLQSAKTLLRSQEEALKQRDEERRQMkskmvAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDI 1861
Cdd:TIGR00606 779 PEEESAKV--------CLTDVTIMERFQMELKDVERKIAQQ-----AAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKI 845
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1862 RSLRDKEEQWDSSRFQLETKMRESDSDtnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDtdklrrDLTKA 1941
Cdd:TIGR00606 846 ELNRKLIQDQQEQIQHLKSKTNELKSE----KLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQ------DSPLE 915
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1942 ESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENEllnVRSEVRDYKQrvhDVNNRVSELQRQLQDA 2021
Cdd:TIGR00606 916 TFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENK---IQDGKDDYLK---QKETELNTVNAQLEEC 989
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2022 NTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEkrvatKELEDLKRRLAQLENERRNSSQLSDgwKKEKITLLKK 2101
Cdd:TIGR00606 990 EKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRE-----NELKEVEEELKQHLKEMGQMQVLQM--KQEHQKLEEN 1062
|
970 980 990
....*....|....*....|....*....|....*...
gi 1767287505 2102 IELLENEKRRTDAAIRETALQREAIEKSLNAMERENKE 2139
Cdd:TIGR00606 1063 IDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAE 1100
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1157-1608 |
1.13e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.15 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1157 RELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA----AEIDKLKSDISALH-------------DKH 1219
Cdd:COG4913 288 RRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRgnggDRLEQLEREIERLEreleererrrarlEAL 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1220 LSDLD----DEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRN 1295
Cdd:COG4913 368 LAALGlplpASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRD 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1296 DADKEIQKWKTDAY------TVRSEAK----ALETT--NTAL-----KAQLQAANDRIDHLTKTVNDHTSKVRDLTS--- 1355
Cdd:COG4913 448 ALAEALGLDEAELPfvgeliEVRPEEErwrgAIERVlgGFALtllvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPdpe 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1356 QVRHLEDELA---DTKGN--------LVQKEMDLESTQNrLRSLEDQH----STLQSDANKWRGELDA--ALRENDILKS 1418
Cdd:COG4913 528 RPRLDPDSLAgklDFKPHpfrawleaELGRRFDYVCVDS-PEELRRHPraitRAGQVKGNGTRHEKDDrrRIRSRYVLGF 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1419 NNtnmetdltrlKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQF---------DTKLTKLRNE 1489
Cdd:COG4913 607 DN----------RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSwdeidvasaEREIAELEAE 676
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1490 LQD---TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHS----HRVSEDSRLNALQELEARKY 1562
Cdd:COG4913 677 LERldaSSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELqdrlEAAEDLARLELRALLEERFA 756
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1767287505 1563 EINDltsrlDSTEQRL-ATLQQDYIKADSERDILSDALRRFQSSANR 1608
Cdd:COG4913 757 AALG-----DAVERELrENLEERIDALRARLNRAEEELERAMRAFNR 798
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
526-1014 |
1.23e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.00 E-value: 1.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 526 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEmaqdseknvdgtvsikrtrslspgktplppsealravrntf 605
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAE----------------------------------------- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 606 rnKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLD--KQFADAKREISNLQKSVDEaernsrrtddkLRASEAERV 683
Cdd:COG4717 93 --LQEELEELEEELEELEAELEELREELEKLEKLLQLLPlyQELEALEAELAELPERLEE-----------LEERLEELR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 684 AAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRD 763
Cdd:COG4717 160 ELEEELEELEAELAELQE--------ELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 764 LENEYNSTQ--RRIEEKETQIR----------YSDDIRRNIQKDLD----------DLREKYDRVHTDNEKILGELEHAQ 821
Cdd:COG4717 232 LENELEAAAleERLKEARLLLLiaaallallgLGGSLLSLILTIAGvlflvlgllaLLFLLLAREKASLGKEAEELQALP 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 822 KAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEK--NGARNNDELDKLRQ-----TISDYESQI 894
Cdd:COG4717 312 ALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEelQLEELEQEIAALLAeagveDEEELRAAL 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 895 NLLRRHNDEldttikghQGKITHLENELHSRSGEIEKLNDLNQ--RLQKEKQDILNQKLKLDGDVQALKETIRKLENELE 972
Cdd:COG4717 392 EQAEEYQEL--------KEELEELEEQLEELLGELEELLEALDeeELEEELEELEEELEELEEELEELREELAELEAELE 463
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 1767287505 973 KLRNENK------ELVGKEARARDAAnQQLSRANLLNKELEDTKQDLK 1014
Cdd:COG4717 464 QLEEDGElaellqELEELKAELRELA-EEWAALKLALELLEEAREEYR 510
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
732-989 |
1.39e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 1.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 732 RIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKydrvhtdne 811
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE--------- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 812 kilgelehaqkaahlAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYE 891
Cdd:COG4942 92 ---------------IAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 892 SQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENEL 971
Cdd:COG4942 157 ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
250
....*....|....*...
gi 1767287505 972 EKLRNENKELVGKEARAR 989
Cdd:COG4942 237 AAAAERTPAAGFAALKGK 254
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1118-1582 |
1.46e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 54.07 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1118 HTITNTKERIERIEKNILDRYH-DDELVEHKIREvndrwKRELERLENEKDDLERRIRELEDELSQIgrgNDKTENDITE 1196
Cdd:pfam12128 241 PEFTKLQQEFNTLESAELRLSHlHFGYKSDETLI-----ASRQEERQETSAELNQLLRTLDDQWKEK---RDELNGELSA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1197 LKrkhaAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDlrdkLNNLEKQLADSLNRENELERE-------- 1268
Cdd:pfam12128 313 AD----AAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQSE----LENLEERLKALTGKHQDVTAKynrrrski 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1269 KRDYDEKINSLYGQNQKIKDEWD---------------DFRNDADKEIQKWKTDAYTVRSEAKALE------TTNTALKA 1327
Cdd:pfam12128 385 KEQNNRDIAGIKDKLAKIREARDrqlavaeddlqalesELREQLEAGKLEFNEEEYRLKSRLGELKlrlnqaTATPELLL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1328 QLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQ--------HSTLQSDA 1399
Cdd:pfam12128 465 QLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQlfpqagtlLHFLRKEA 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1400 NKWRGEL-----DAALRENDILKSNNTNM---ETDLTRLKNRLKSAE-----DALKELKNSLSHAKTEKERLQNAFREKT 1466
Cdd:pfam12128 545 PDWEQSIgkvisPELLHRTDLDPEVWDGSvggELNLYGVKLDLKRIDvpewaASEEELRERLDKAEEALQSAREKQAAAE 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1467 KQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQK-LSQELKFGNEQIQRKSDEYQTTIDDL-AHSHR 1544
Cdd:pfam12128 625 EQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKaLAERKDSANERLNSLEAQLKQLDKKHqAWLEE 704
|
490 500 510
....*....|....*....|....*....|....*...
gi 1767287505 1545 VSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQ 1582
Cdd:pfam12128 705 QKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARR 742
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1327-1585 |
1.69e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.81 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1327 AQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLE-------------------------DELADTKGNLVQKEMDLEST 1381
Cdd:PRK04863 837 AELRQLNRRRVELERALADHESQEQQQRSQLEQAKeglsalnrllprlnlladetladrvEEIREQLDEAEEAKRFVQQH 916
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1382 QNRLRSLEDQHSTLQSDAnkwrgeldaalRENDILKSNNTNMETDLTRLKNRLksaeDALKELKNSLSHAK--------T 1453
Cdd:PRK04863 917 GNALAQLEPIVSVLQSDP-----------EQFEQLKQDYQQAQQTQRDAKQQA----FALTEVVQRRAHFSyedaaemlA 981
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1454 EKERLQNAFREKTKQADhlnQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQEL-KFG-------NEQI 1525
Cdd:PRK04863 982 KNSDLNEKLRQRLEQAE---QERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELqDLGvpadsgaEERA 1058
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1526 QRKSDEyqttIDDLAHSHRvsedSRLNALQElearkyEINDLTSRLDSTEQRLATLQQDY 1585
Cdd:PRK04863 1059 RARRDE----LHARLSANR----SRRNQLEK------QLTFCEAEMDNLTKKLRKLERDY 1104
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
759-992 |
1.75e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 759 DKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQR 838
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 839 DDYQKQKDEHARHLFDIrhkleteikGRQDLEKNGARNNDELDKLR-----QTISDY-ESQINLLRRHNDELDTTIKGHQ 912
Cdd:COG4942 100 EAQKEELAELLRALYRL---------GRQPPLALLLSPEDFLDAVRrlqylKYLAPArREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 913 GKITHLENELHSRSGEIEKLndlnQRLQKEKQDILNQklkLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAA 992
Cdd:COG4942 171 AERAELEALLAELEEERAAL----EALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1775-2218 |
1.81e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.51 E-value: 1.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1775 TRYRNIEDNLQ--DAEEER-RALESRLqSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKE-----AQLRHLNEQ 1846
Cdd:PRK02224 150 DRQDMIDDLLQlgKLEEYReRASDARL-GVERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESElaeldEEIERYEEQ 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1847 LKNLRTDLDNAHTDIRSLRDKEEQWDSsrfqLETKMRESDSDtnkyqlqIASFESERQILTEKIKELDGAL--------- 1917
Cdd:PRK02224 229 REQARETRDEADEVLEEHEERREELET----LEAEIEDLRET-------IAETEREREELAEEVRDLRERLeeleeerdd 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1918 RLSDSKVQDMKDDTDKLRRDL--TKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRS 1995
Cdd:PRK02224 298 LLAEAGLDDADAEAVEARREEleDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEARE 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1996 EVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATK---------- 2065
Cdd:PRK02224 378 AVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAlleagkcpec 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2066 ------------------ELEDLKRRLAQLENERRNssqlsdgwKKEKITLLKkiELLENEKRRTDAAIRETALQREAIE 2127
Cdd:PRK02224 458 gqpvegsphvetieedreRVEELEAELEDLEEEVEE--------VEERLERAE--DLVEAEDRIERLEERREDLEELIAE 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2128 KSLNAMERENKELYKNCAQLQQQIAQLEMEngnrilELTNKQREEQERQLIRMRQEKGQIEKVIENRERThrNRIKQLED 2207
Cdd:PRK02224 528 RRETIEEKRERAEELRERAAELEAEAEEKR------EAAAEAEEEAEEAREEVAELNSKLAELKERIESL--ERIRTLLA 599
|
490
....*....|.
gi 1767287505 2208 QIAILRDQLDG 2218
Cdd:PRK02224 600 AIADAEDEIER 610
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1322-1583 |
1.81e-06 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 52.76 E-value: 1.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1322 NTALKAQLQAANDRIDHLtktvndhtskvRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLqsdank 1401
Cdd:pfam19220 5 NELLRVRLGEMADRLEDL-----------RSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKL------ 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1402 wRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQlasqfdt 1481
Cdd:pfam19220 68 -RRELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEE------- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1482 KLTKLRNELQDTNDKLITSDTERNALRNELQKLSQEL--------KFGNE--QIQRKSDEYQTTIDdlAHSHRVSE-DSR 1550
Cdd:pfam19220 140 ENKALREEAQAAEKALQRAEGELATARERLALLEQENrrlqalseEQAAElaELTRRLAELETQLD--ATRARLRAlEGQ 217
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1767287505 1551 LNALQ------------ELEARKYEINDLTSRLDSTEQRLATLQQ 1583
Cdd:pfam19220 218 LAAEQaereraeaqleeAVEAHRAERASLRMKLEALTARAAATEQ 262
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1153-1613 |
1.81e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 1.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1153 DRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGK 1232
Cdd:COG4913 341 EQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEA-LAEAEAALRDLRR 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1233 AVENLKSVEDDLRDKLNNLE-------KQLADSLN-RENEL--------------------ER-----------EKRDYD 1273
Cdd:COG4913 420 ELRELEAEIASLERRKSNIParllalrDALAEALGlDEAELpfvgelievrpeeerwrgaiERvlggfaltllvPPEHYA 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1274 ---EKINSLYGQN----QKIKDEWDDFRND-------------ADKEIQKW-------KTDAYTVRSEAkALETTNTALK 1326
Cdd:COG4913 500 aalRWVNRLHLRGrlvyERVRTGLPDPERPrldpdslagkldfKPHPFRAWleaelgrRFDYVCVDSPE-ELRRHPRAIT 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1327 AQLQ--------AANDRIDHLTKTV--NDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLE--DQHST 1394
Cdd:COG4913 579 RAGQvkgngtrhEKDDRRRIRSRYVlgFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQrlAEYSW 658
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1395 LQSDANKWRGELDAALRENDILKSNNtnmeTDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHL-N 1473
Cdd:COG4913 659 DEIDVASAEREIAELEAELERLDASS----DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELqD 734
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1474 QLASQFDTKLTKLRNELQDTNDKLITSDTE---RNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDS- 1549
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGDAVErelRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESl 814
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 1550 -----RLNALQE--LEARKYEINDLtsRLDSTEQRLATLQQDYikADSERDI------LSDALRRFQSSANRVINFH 1613
Cdd:COG4913 815 peylaLLDRLEEdgLPEYEERFKEL--LNENSIEFVADLLSKL--RRAIREIkeridpLNDSLKRIPFGPGRYLRLE 887
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1735-1912 |
1.86e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 51.46 E-value: 1.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1735 LQSLLNKIEKLEMERNELRDTLARMKKKttethttINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQ 1814
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDE-------LAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1815 -RDE-ERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDkeeqwdssrfQLETKMRESDSDTNKY 1892
Cdd:COG1579 85 vRNNkEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEA----------ELEEKKAELDEELAEL 154
|
170 180
....*....|....*....|
gi 1767287505 1893 QLQIASFESERQILTEKIKE 1912
Cdd:COG1579 155 EAELEELEAEREELAAKIPP 174
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1321-1608 |
2.46e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 52.99 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1321 TNTALKAQLQAANDRIDHltkTVNDHTSkVRDLTSQVRHLeDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDAn 1400
Cdd:PRK11281 37 TEADVQAQLDALNKQKLL---EAEDKLV-QQDLEQTLALL-DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDN- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1401 kwrgelDAALREnDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREktkqadhlNQlasqfd 1480
Cdd:PRK11281 111 ------DEETRE-TLSTLSLRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYA--------NS------ 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1481 TKLTKLRNELQDTND-KLITSDTERNALRNELQKLSQELKF------GNEQIQrksDEYQTTIDDLAHSHRVSEdSRLNA 1553
Cdd:PRK11281 170 QRLQQIRNLLKGGKVgGKALRPSQRVLLQAEQALLNAQNDLqrksleGNTQLQ---DLLQKQRDYLTARIQRLE-HQLQL 245
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1554 LQELearkyeINDltSRLDSTEQRLATLQQdyikADSERDILSDALRRFQSSANR 1608
Cdd:PRK11281 246 LQEA------INS--KRLTLSEKTVQEAQS----QDEAARIQANPLVAQELEINL 288
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
850-995 |
2.54e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 51.08 E-value: 2.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 850 RHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLEN--ELHSRSG 927
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYEALQK 96
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 928 EIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQ 995
Cdd:COG1579 97 EIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAE 164
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1772-2140 |
2.73e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.87 E-value: 2.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1772 QKETRYRNIEDNLQDAEEERRALESRLQsAKTLLRSQEEALKQRDEERRQmKSKMVAAELQARGKEAQLRhlNEQLKNLR 1851
Cdd:pfam01576 23 KAESELKELEKKHQQLCEEKNALQEQLQ-AETELCAEAEEMRARLAARKQ-ELEEILHELESRLEEEEER--SQQLQNEK 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1852 TDLDNAHTDIRSLRDKEEQwDSSRFQLE-----TKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQD 1926
Cdd:pfam01576 99 KKMQQHIQDLEEQLDEEEA-ARQKLQLEkvtteAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1927 MKDDTDK-------LRRDLTKAESVENELRK--------TIDIQSKTSHEYQL---LKDQLLNTQNELNGANNRKQQLEN 1988
Cdd:pfam01576 178 LSKLKNKheamisdLEERLKKEEKGRQELEKakrklegeSTDLQEQIAELQAQiaeLRAQLAKKEEELQAALARLEEETA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1989 ELLNVRSEVRdykqrvhDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRtteTDLRQQLETAKNEKRVATK--- 2065
Cdd:pfam01576 258 QKNNALKKIR-------ELEAQISELQEDLESERAARNKAEKQRRDLGEELEALK---TELEDTLDTTAAQQELRSKreq 327
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 2066 ELEDLKRRLAqlENERRNSSQLSDGWKKEKITLLKKIELLENEKRrtdaairetalQREAIEKSLNAMERENKEL 2140
Cdd:pfam01576 328 EVTELKKALE--EETRSHEAQLQEMRQKHTQALEELTEQLEQAKR-----------NKANLEKAKQALESENAEL 389
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1362-1609 |
3.08e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 3.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1362 DELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDAL 1441
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1442 KELKNSLShaktekERLQNAFRekTKQADHLNQLASQFD-TKLTKLRNELQDTNDklitsdtERNALRNELQKLSQELKF 1520
Cdd:COG4942 100 EAQKEELA------ELLRALYR--LGRQPPLALLLSPEDfLDAVRRLQYLKYLAP-------ARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1521 GNEQIQRKSDEYQTTIDDLahshrvsEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDyikADSERDILSDALR 1600
Cdd:COG4942 165 LRAELEAERAELEALLAEL-------EEERAALEALKAERQKLLARLEKELAELAAELAELQQE---AEELEALIARLEA 234
|
....*....
gi 1767287505 1601 RFQSSANRV 1609
Cdd:COG4942 235 EAAAAAERT 243
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1220-1440 |
3.11e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 3.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1220 LSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADK 1299
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1300 EIQKwktdAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLE 1379
Cdd:COG4942 109 LLRA----LYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELE 184
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 1380 STQNRLRSLEDQHSTLQSDANKWRGELDAALREndiLKSNNTNMETDLTRLKNRLKSAEDA 1440
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAELAE---LQQEAEELEALIARLEAEAAAAAER 242
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1142-1481 |
3.22e-06 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 52.20 E-value: 3.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1142 ELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQigrgndkTENDITELKRKHaaeidklkSDISALHDKHLS 1221
Cdd:pfam07888 51 EAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQ-------SREKHEELEEKY--------KELSASSEELSE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1222 DLDDEKEQYGKAVENLKSVEDDLRD----------KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWD 1291
Cdd:pfam07888 116 EKDALLAQRAAHEARIRELEEDIKTltqrvleretELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1292 DFRN---DADKEIQKWKTDAYTVR---SEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELA 1365
Cdd:pfam07888 196 ELRNslaQRDTQVLQLQDTITTLTqklTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAELH 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1366 DTKGNLVQ-----KEMDLESTQNRLRSLEDQHSTLQS-DANKWRGE--------LDAALRENdilKSNNTNMETDLTRLK 1431
Cdd:pfam07888 276 QARLQAAQltlqlADASLALREGRARWAQERETLQQSaEADKDRIEklsaelqrLEERLQEE---RMEREKLEVELGREK 352
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 1432 --NRLKSAEDA--LKELKNSLSHAKTEKERLQNafrEKTKQADHLNQLASQFDT 1481
Cdd:pfam07888 353 dcNRVQLSESRreLQELKASLRVAQKEKEQLQA---EKQELLEYIRQLEQRLET 403
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1784-2237 |
3.68e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.46 E-value: 3.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1784 LQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGK--EAQLRHLNEQLKNLRTDLDNAHTDI 1861
Cdd:COG4717 83 AEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEalEAELAELPERLEELEERLEELRELE 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1862 RSLRDKEEQWDSSRFQLETKMRESDSDTnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA 1941
Cdd:COG4717 163 EELEELEAELAELQEELEELLEQLSLAT---EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1942 ESVE--NELRKTIDIQSkTSHEYQLLKDQLLNTQNELNGAnnrkQQLENELLNVRSEVRDYKQRVHdvNNRVSELQRQLQ 2019
Cdd:COG4717 240 ALEErlKEARLLLLIAA-ALLALLGLGGSLLSLILTIAGV----LFLVLGLLALLFLLLAREKASL--GKEAEELQALPA 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2020 DANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRvatkELEDLKRRLAQLENERRNSSQLSDGWKKEKITLL 2099
Cdd:COG4717 313 LEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLR----EAEELEEELQLEELEQEIAALLAEAGVEDEEELR 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2100 KKIELLEnekrrtdaairetalQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENgnRILELtNKQREEQERQLIR 2179
Cdd:COG4717 389 AALEQAE---------------EYQELKEELEELEEQLEELLGELEELLEALDEEELEE--ELEEL-EEELEELEEELEE 450
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2180 MRQEKGQIEkvienrerthrNRIKQLE--DQIAILRDQLDGERRRRREYVDRSMVNDIGR 2237
Cdd:COG4717 451 LREELAELE-----------AELEQLEedGELAELLQELEELKAELRELAEEWAALKLAL 499
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1770-2217 |
3.89e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.48 E-value: 3.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1770 INQKETRYRNIEDNLQDAEEERRALESRLQSAKTLL----RSQEE---ALKQRDEERRQMKSKMVAAELQARGKEAQLRH 1842
Cdd:pfam01576 491 LRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLsdmkKKLEEdagTLEALEEGKKRLQRELEALTQQLEEKAAAYDK 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1843 LNEQLKNLRTDLDNAHTDIRSLRD----------------KEEQWDSSRFQLETKMRESDSdtNKYQLQIASFESERQIL 1906
Cdd:pfam01576 571 LEKTKNRLQQELDDLLVDLDHQRQlvsnlekkqkkfdqmlAEEKAISARYAEERDRAEAEA--REKETRALSLARALEEA 648
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1907 TEKIKELDGALRLSDSKVQDM---KDDTDKLRRDLTKA---------------ESVENELRKTIDIQSKTSHEYQLLKDQ 1968
Cdd:pfam01576 649 LEAKEELERTNKQLRAEMEDLvssKDDVGKNVHELERSkraleqqveemktqlEELEDELQATEDAKLRLEVNMQALKAQ 728
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1969 L---LNTQNELNgaNNRKQQLENELLNVRSEVRD-YKQRVHDVNNR------VSELQRQLQDANteKNRVEdrflsVEKV 2038
Cdd:pfam01576 729 FerdLQARDEQG--EEKRRQLVKQVRELEAELEDeRKQRAQAVAAKkkleldLKELEAQIDAAN--KGREE-----AVKQ 799
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2039 VNTMRTTETDLRQQLETAK------------NEKRVATKELE--DLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIEL 2104
Cdd:pfam01576 800 LKKLQAQMKDLQRELEEARasrdeilaqskeSEKKLKNLEAEllQLQEDLAASERARRQAQQERDELADEIASGASGKSA 879
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2105 LENEKRRTDAAIreTALQREAIEKSLNaMERENKELYKncAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEK 2184
Cdd:pfam01576 880 LQDEKRRLEARI--AQLEEELEEEQSN-TELLNDRLRK--STLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKL 954
|
490 500 510
....*....|....*....|....*....|...
gi 1767287505 2185 GQIEKVIENRertHRNRIKQLEDQIAILRDQLD 2217
Cdd:pfam01576 955 QEMEGTVKSK---FKSSIAALEAKIAQLEEQLE 984
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
506-892 |
3.90e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.35 E-value: 3.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 506 DAELHKELMTKYEESIErniELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGT-VSIKRTRS 584
Cdd:PRK02224 336 AAQAHNEEAESLREDAD---DLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDApVDLGNAED 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 585 LspgktplppSEALRAVRNTFRNKDNDiqqLERKLKIAESQVKE---------------------FLNKFENADEARRRL 643
Cdd:PRK02224 413 F---------LEELREERDELREREAE---LEATLRTARERVEEaealleagkcpecgqpvegspHVETIEEDRERVEEL 480
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 644 DKQFADAKREISNLQKSVDEAE------------RNSRRTDDKLRASEAERVAAEKAR-KFLEDELAKLQASFQKSStDD 710
Cdd:PRK02224 481 EAELEDLEEEVEEVEERLERAEdlveaedrierlEERREDLEELIAERRETIEEKRERaEELRERAAELEAEAEEKR-EA 559
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 711 ARKLRDEMDEHTNSIQeEFKTRIDELNRRVENLlrenNRLKSEVNPLKDKYRDLEneynstqrRIEEKETQIRYSDDIRR 790
Cdd:PRK02224 560 AAEAEEEAEEAREEVA-ELNSKLAELKERIESL----ERIRTLLAAIADAEDEIE--------RLREKREALAELNDERR 626
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 791 niqkdlDDLREKYDRVHtdnekilgELEHAQKAAHLAEqqLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLE 870
Cdd:PRK02224 627 ------ERLAEKRERKR--------ELEAEFDEARIEE--AREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENEL 690
|
410 420
....*....|....*....|..
gi 1767287505 871 KNGARNNDELDKLRQTISDYES 892
Cdd:PRK02224 691 EELEELRERREALENRVEALEA 712
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1119-1335 |
4.11e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 4.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1119 TITNTKERIERIEKNILDRYHDDELVEHKIREVNDrwkrELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELK 1198
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLK----QLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1199 RKHAAEIDKLKSDISA-------------LHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENEL 1265
Cdd:COG4942 97 AELEAQKEELAELLRAlyrlgrqpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1266 EREKRDYDEKINSLygqnQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDR 1335
Cdd:COG4942 177 EALLAELEEERAAL----EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
521-783 |
4.13e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 52.33 E-value: 4.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 521 IERNIELESrgDDSQRKIAELEAELRRNREKLNEAQGALKKlhemaqdseknvdgtvsikrtrslspgktplppsealra 600
Cdd:COG3206 162 LEQNLELRR--EEARKALEFLEEQLPELRKELEEAEAALEE--------------------------------------- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 601 vrntFRNKdNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEA 680
Cdd:COG3206 201 ----FRQK-NGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAEL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 681 ERVAAEKARKFLED--ELAKLQASFQksstddarKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEV---N 755
Cdd:COG3206 276 EAELAELSARYTPNhpDVIALRAQIA--------ALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLaelP 347
|
250 260 270
....*....|....*....|....*....|...
gi 1767287505 756 PLKDKYRDLENEYNSTQRRIEE-----KETQIR 783
Cdd:COG3206 348 ELEAELRRLEREVEVARELYESllqrlEEARLA 380
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1147-1584 |
4.34e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 52.03 E-value: 4.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1147 KIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALHdkHL-SDLDD 1225
Cdd:pfam05483 223 KIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKD--HLtKELED 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1226 EKEQYGKAVENLKSVEDDLRdklnnLEKQLADSLNRENELEREkrdydekinslygqnqkikdewddfrndadkEIQKWK 1305
Cdd:pfam05483 301 IKMSLQRSMSTQKALEEDLQ-----IATKTICQLTEEKEAQME-------------------------------ELNKAK 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1306 TDAYTVRSEAKA----LETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLEST 1381
Cdd:pfam05483 345 AAHSFVVTEFEAttcsLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEK 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1382 qnrlRSLEDQHSTLQSDANKWRGELDAalRENDIlksnnTNMETDLTRLKNRLKSAEDALKELKNSLshaktEKERLQNA 1461
Cdd:pfam05483 425 ----KQFEKIAEELKGKEQELIFLLQA--REKEI-----HDLEIQLTAIKTSEEHYLKEVEDLKTEL-----EKEKLKNI 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1462 frEKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQ-------ELKFGNEQIQRKSDEYQT 1534
Cdd:pfam05483 489 --ELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEkemnlrdELESVREEFIQKGDEVKC 566
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1535 TIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQD 1584
Cdd:pfam05483 567 KLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQE 616
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1265-1607 |
4.98e-06 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 52.13 E-value: 4.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1265 LEREKRDYDEKINSLYGQNQKIKDEwddfRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVN 1344
Cdd:pfam10174 245 LERNIRDLEDEVQMLKTNGLLHTED----REEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNS 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1345 DHTSKV----RDLTSQVRH---LEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILK 1417
Cdd:pfam10174 321 DCKQHIevlkESLTAKEQRaaiLQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQ 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1418 SNNTNM-------ETDLTRLKNRLKSAED-------ALKELKNSLSHAKTEKERLQNAF----REKTKQADHLNQLASQF 1479
Cdd:pfam10174 401 KKIENLqeqlrdkDKQLAGLKERVKSLQTdssntdtALTTLEEALSEKERIIERLKEQReredRERLEELESLKKENKDL 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1480 DTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNAlqelea 1559
Cdd:pfam10174 481 KEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTNP------ 554
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1767287505 1560 rkyeinDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSAN 1607
Cdd:pfam10174 555 ------EINDRIRLLEQEVARYKEESGKAQAEVERLLGILREVENEKN 596
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1732-2140 |
5.74e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.10 E-value: 5.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1732 EGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEA 1811
Cdd:pfam01576 200 EKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQED 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1812 LkqrdeerrqmkskmvAAELQARGK-EAQLRHLNEQLKNLRTDLD------NAHTDIRSLRDKEEQWDSSRFQLETKMRE 1884
Cdd:pfam01576 280 L---------------ESERAARNKaEKQRRDLGEELEALKTELEdtldttAAQQELRSKREQEVTELKKALEEETRSHE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1885 SDS-----------DTNKYQLQIA-----SFESERQILTEKIKELDGALRLsdskVQDMKDDTDKLRRdltKAESVENEL 1948
Cdd:pfam01576 345 AQLqemrqkhtqalEELTEQLEQAkrnkaNLEKAKQALESENAELQAELRT----LQQAKQDSEHKRK---KLEGQLQEL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1949 rktidiQSKTSheyqllkdqllNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRV 2028
Cdd:pfam01576 418 ------QARLS-----------ESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEE 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2029 EDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLkrrlaqlenerrnSSQLSDgWKKEKITLLKKIELLENE 2108
Cdd:pfam01576 481 TRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTL-------------QAQLSD-MKKKLEEDAGTLEALEEG 546
|
410 420 430
....*....|....*....|....*....|..
gi 1767287505 2109 KRRTDAAIRETALQREAIEKSLNAMERENKEL 2140
Cdd:pfam01576 547 KKRLQRELEALTQQLEEKAAAYDKLEKTKNRL 578
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
842-1533 |
5.82e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 52.15 E-value: 5.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 842 QKQKDEHARHLFDIRHKleteikgrQDLEKNGArnndELDKLRQTISDYESQINllrrhndELDTTIKGHQGKITHLENE 921
Cdd:pfam12128 217 RLNRQQVEHWIRDIQAI--------AGIMKIRP----EFTKLQQEFNTLESAEL-------RLSHLHFGYKSDETLIASR 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 922 LHSRSgeiEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENK--ELVGKEARARDAANQQLSRA 999
Cdd:pfam12128 278 QEERQ---ETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGafLDADIETAAADQEQLPSWQS 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1000 NLLNKE-----LEDTKQDLKHSTD-----VNKQLEQDIRDLKERLANIgkggrisRDSTTGTDGGAFGDRSSVADPSRTR 1069
Cdd:pfam12128 355 ELENLEerlkaLTGKHQDVTAKYNrrrskIKEQNNRDIAGIKDKLAKI-------REARDRQLAVAEDDLQALESELREQ 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1070 GAAGSTVFVPAAEDIESRGGGE--------------IDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTK---------ER 1126
Cdd:pfam12128 428 LEAGKLEFNEEEYRLKSRLGELklrlnqatatpellLQLENFDERIERAREEQEAANAEVERLQSELRQarkrrdqasEA 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1127 IERIEKNILDRYHDDELVEHKI------------REVNDrWKRELERLENE----KDDL--ERRIRELEDELSQIGRGND 1188
Cdd:pfam12128 508 LRQASRRLEERQSALDELELQLfpqagtllhflrKEAPD-WEQSIGKVISPellhRTDLdpEVWDGSVGGELNLYGVKLD 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1189 KTENDITE---LKRKHAAEIDKLKSDISALHDKHlSDLDDEKEQYGKAVEN-----------LKSVEDDLRdKLNNLEKQ 1254
Cdd:pfam12128 587 LKRIDVPEwaaSEEELRERLDKAEEALQSAREKQ-AAAEEQLVQANGELEKasreetfartaLKNARLDLR-RLFDEKQS 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1255 LADSLNRenELEREKRDYDEKINSLYGQNQKIKDEW--------DDFRNDADKEIQKWK-----TDAYTVRSEAkALETT 1321
Cdd:pfam12128 665 EKDKKNK--ALAERKDSANERLNSLEAQLKQLDKKHqawleeqkEQKREARTEKQAYWQvvegaLDAQLALLKA-AIAAR 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1322 NTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANK 1401
Cdd:pfam12128 742 RSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIER 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1402 wrgeldAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLqNAFRE--KTKQAD----HLNQL 1475
Cdd:pfam12128 822 ------AISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKL-ATLKEdaNSEQAQgsigERLAQ 894
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1476 ASQFDTKLTKLRNELQD--TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ 1533
Cdd:pfam12128 895 LEDLKLKRDYLSESVKKyvEHFKNVIADHSGSGLAETWESLREEDHYQNDKGIRLLDYRK 954
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
526-684 |
5.96e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.92 E-value: 5.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 526 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDgTVSIKRTRSlspgktplppSEALRAVRNT- 604
Cdd:COG1579 21 RLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIE-EVEARIKKY----------EEQLGNVRNNk 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 605 -FRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERV 683
Cdd:COG1579 90 eYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELA 169
|
.
gi 1767287505 684 A 684
Cdd:COG1579 170 A 170
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1782-2216 |
7.06e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 51.76 E-value: 7.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1782 DNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMvaaELQARGKEAQLRH----LNEQLKNLRTDLDNA 1857
Cdd:pfam12128 244 TKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAEL---NQLLRTLDDQWKEkrdeLNGELSAADAAVAKD 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1858 HTDIRSLRDKEEQWDSSRfqLETKMRESD------SDTNKYQLQIASFESERQILTEKIKELDGALRLS-DSKVQDMKDD 1930
Cdd:pfam12128 321 RSELEALEDQHGAFLDAD--IETAAADQEqlpswqSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQnNRDIAGIKDK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1931 TDKLR--RDLTKA------ESVENELRKTIDIQSKTSHEYQLlkdQLLNTQNELNGANNRKQQLENELLNVR---SEVRD 1999
Cdd:pfam12128 399 LAKIReaRDRQLAvaeddlQALESELREQLEAGKLEFNEEEY---RLKSRLGELKLRLNQATATPELLLQLEnfdERIER 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2000 YKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNE-KRVATKELEDLKRRLAQLE 2078
Cdd:pfam12128 476 AREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTlLHFLRKEAPDWEQSIGKVI 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2079 NER----------RNSSQLSDGWKKEKITL-LKKIELLE----NEKRRTDAAIRETALQ--REAIEKSLNAMERENKELY 2141
Cdd:pfam12128 556 SPEllhrtdldpeVWDGSVGGELNLYGVKLdLKRIDVPEwaasEEELRERLDKAEEALQsaREKQAAAEEQLVQANGELE 635
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 2142 KncaqlqqqiAQLEMENGNRILEltnKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQL 2216
Cdd:pfam12128 636 K---------ASREETFARTALK---NARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKH 698
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
681-1258 |
7.13e-06 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 51.28 E-value: 7.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 681 ERVAAEKARKFLEDELAKLQAsfQKSSTDDARKLRDEMDEhtnsiQEEFKTRIDELNRRvENLLRENNRLKSEVNPLKDK 760
Cdd:pfam05557 12 SQLQNEKKQMELEHKRARIEL--EKKASALKRQLDRESDR-----NQELQKRIRLLEKR-EAEAEEALREQAELNRLKKK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 761 YRDleneynSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDD 840
Cdd:pfam05557 84 YLE------ALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 841 YQKQKDEHARHLFDIRhKLETEIKGRQDLEKNGARNNDELDKlrqtISDYESQINLLRRHNDELDTTIkGHQGKITHLEN 920
Cdd:pfam05557 158 LEKQQSSLAEAEQRIK-ELEFEIQSQEQDSEIVKNSKSELAR----IPELEKELERLREHNKHLNENI-ENKLLLKEEVE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 921 ELHSRSGEIEKLNDLNQRLQKEKQDI---LNQKLKLDgdvQALKETIRK---LENELEKLRNENKELVGKEArardAANQ 994
Cdd:pfam05557 232 DLKRKLEREEKYREEAATLELEKEKLeqeLQSWVKLA---QDTGLNLRSpedLSRRIEQLQQREIVLKEENS----SLTS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 995 QLSRANLLNKELED-TKQDLKHSTDVNKQLEQD---IRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRG 1070
Cdd:pfam05557 305 SARQLEKARRELEQeLAQYLKKIEDLNKKLKRHkalVRRLQRRVLLLTKERDGYRAILESYDKELTMSNYSPQLLERIEE 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1071 AAGSTVFVPAAEDiesrgggeiDIPSSGDVIHgrdgrdgrdagnrgtHTITNTKERIERIEKNILDRYHDDELVE-HKIR 1149
Cdd:pfam05557 385 AEDMTQKMQAHNE---------EMEAQLSVAE---------------EELGGYKQQAQTLERELQALRQQESLADpSYSK 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1150 EVNDRWKRELERLENEKDDLERRIRELEDELSQ---IGRGNDK-------TENDITELKRKHAAEIDKLKSDISALHDkH 1219
Cdd:pfam05557 441 EEVDSLRRKLETLELERQRLREQKNELEMELERrclQGDYDPKktkvlhlSMNPAAEAYQQRKNQLEKLQAEIERLKR-L 519
|
570 580 590
....*....|....*....|....*....|....*....
gi 1767287505 1220 LSDLDDEKEQYGKAVEnlkSVEDDLRDKLNNLEKQLADS 1258
Cdd:pfam05557 520 LKKLEDDLEQVLRLPE---TTSTMNFKEVLDLRKELESA 555
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1144-1276 |
7.29e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.54 E-value: 7.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1144 VEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA-------------------AE 1204
Cdd:COG1579 22 LEHRLKEL----PAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKkyeeqlgnvrnnkeyealqKE 97
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1205 IDKLKSDISALHDKHLS---DLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKI 1276
Cdd:COG1579 98 IESLKRRISDLEDEILElmeRIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKI 172
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1984-2134 |
8.44e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.54 E-value: 8.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1984 QQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEK--R 2061
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKeyE 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 2062 VATKELEDLKRRLAQLENERRN----SSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAME 2134
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILElmerIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELA 169
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1433-1609 |
9.02e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 9.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1433 RLKSAEDALKELKNSLSH--AKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTER-NALRN 1509
Cdd:COG4913 266 AARERLAELEYLRAALRLwfAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRlEQLER 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1510 ELQKLSQELkfgnEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKyeiNDLTSRLDSTEQRLATLQQDYIKAD 1589
Cdd:COG4913 346 EIERLEREL----EERERRRARLEALLAALGLPLPASAEEFAALRAEAAALL---EALEEELEALEEALAEAEAALRDLR 418
|
170 180
....*....|....*....|
gi 1767287505 1590 SERDILSDALRRFQSSANRV 1609
Cdd:COG4913 419 RELRELEAEIASLERRKSNI 438
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1782-2231 |
9.03e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.30 E-value: 9.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1782 DNLQDAEEERRALESRLQSAKtllRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRhlnEQLKNLRTDLDNAHTDI 1861
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAK---KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKA---AAAKKKADEAKKKAEEK 1430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1862 RSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSdSKVQDMKDDTDKLRRDlTKA 1941
Cdd:PTZ00121 1431 KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAK-KKAEEAKKKADEAKKA-AEA 1508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1942 ESVENELRKTidiqSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE---NELLNVRSEVRDYKQRVHDVNNRVSELQRQL 2018
Cdd:PTZ00121 1509 KKKADEAKKA----EEAKKADEAKKAEEAKKADEAKKAEEKKKADElkkAEELKKAEEKKKAEEAKKAEEDKNMALRKAE 1584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2019 QDANTEKNRVEDRFLSVEKVvNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITL 2098
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYEEE-KKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKA 1663
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2099 LKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENK--ELYKNCAQLQQQIAQ---LEMENGNRILELtNKQREEQ 2173
Cdd:PTZ00121 1664 AEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKaeELKKKEAEEKKKAEElkkAEEENKIKAEEA-KKEAEED 1742
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 2174 ERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQLDGERRRRREYVDRSM 2231
Cdd:PTZ00121 1743 KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI 1800
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1731-2217 |
9.09e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.19 E-value: 9.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1731 LEGTLQSLLNKIEKLEMERN---ELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLqsaktllRS 1807
Cdd:PRK02224 211 LESELAELDEEIERYEEQREqarETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEV-------RD 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1808 QEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDS 1887
Cdd:PRK02224 284 LRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELRE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1888 DTNKYQLQIASFESERQILTEKIKELDGAL-----RLSDSKVQ--DMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSH 1960
Cdd:PRK02224 364 EAAELESELEEAREAVEDRREEIEELEEEIeelreRFGDAPVDlgNAEDFLEELREERDELREREAELEATLRTARERVE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1961 EYQLLKD--------QLLNTQNELNGANNRKQQ---LENELLNVRSEVRDYKQRvHDVNNRVSELQRQLQDANTEKNRVE 2029
Cdd:PRK02224 444 EAEALLEagkcpecgQPVEGSPHVETIEEDRERveeLEAELEDLEEEVEEVEER-LERAEDLVEAEDRIERLEERREDLE 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2030 DRFLSVEKVVNTMRTTETDLRQQ---LETAKNEKRVATKEL----EDLKRRLAQLENERrnssqlsdGWKKEKITLLKKI 2102
Cdd:PRK02224 523 ELIAERRETIEEKRERAEELRERaaeLEAEAEEKREAAAEAeeeaEEAREEVAELNSKL--------AELKERIESLERI 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2103 ELLENEKRRTDAAIRETALQREAieksLNAMERENKELYKncAQLQQQIAQLEMENGNRILEL-TNKQREEQ-----ERQ 2176
Cdd:PRK02224 595 RTLLAAIADAEDEIERLREKREA----LAELNDERRERLA--EKRERKRELEAEFDEARIEEArEDKERAEEyleqvEEK 668
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1767287505 2177 LIRMRQEKGQIEKVIENRErthrNRIKQLEDqiaiLRDQLD 2217
Cdd:PRK02224 669 LDELREERDDLQAEIGAVE----NELEELEE----LRERRE 701
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1835-2213 |
1.04e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.13 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1835 GKEAQLRHLNEQLKNLRTDLDNAHtdIRSLRDKEEQ----WDSSRFQLETKMRESDSDTNKYQLQiasfESERQILTEKI 1910
Cdd:pfam02463 113 GKNVTKKEVAELLESQGISPEAYN--FLVQGGKIEIiammKPERRLEIEEEAAGSRLKRKKKEAL----KKLIEETENLA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1911 KELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENEL 1990
Cdd:pfam02463 187 ELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEK 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1991 LnvrsevrDYKQRVHDVNNRVSELQrqlqdaNTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDL 2070
Cdd:pfam02463 267 L-------AQVLKENKEEEKEKKLQ------EEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKE 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2071 KRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQ 2150
Cdd:pfam02463 334 KEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLEL 413
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 2151 IAQLEMENGNRILELTNKQREEQERQLIrmRQEKGQIEKVIENRERTHRNRIKQLEDQIAILR 2213
Cdd:pfam02463 414 ARQLEDLLKEEKKEELEILEEEEESIEL--KQGKLTEEKEELEKQELKLLKDELELKKSEDLL 474
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
630-1535 |
1.19e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 50.82 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 630 LNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLqasfqksstd 709
Cdd:TIGR00606 181 ATRYIKALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPL---------- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 710 darKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSE-VNPLKDKYRDLENEYNSTQRRIEEKETQirysddi 788
Cdd:TIGR00606 251 ---KNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKmEKVFQGTDEQLNDLYHNHQRTVREKERE------- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 789 RRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQlkeikIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQD 868
Cdd:TIGR00606 321 LVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEH-----IRARDSLIQSLATRLELDGFERGPFSERQIKNF 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 869 LEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILN 948
Cdd:TIGR00606 396 HTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 949 qklkldgdvqaLKETIRKLENELEKLrNENKELVGKEARARDAANQQLSRANLLNKELEDTKQdLKHSTDVNKQLEQDIR 1028
Cdd:TIGR00606 476 -----------LDQELRKAERELSKA-EKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQ-LNHHTTTRTQMEMLTK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1029 DlkerlaNIGKGGRISRDSTTGTDggafgdrssvadpsRTRGAAGSTVFVPAAEDIESRGGGEIDIpssgdvihgrdgrd 1108
Cdd:TIGR00606 543 D------KMDKDEQIRKIKSRHSD--------------ELTSLLGYFPNKKQLEDWLHSKSKEINQ-------------- 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1109 grdagnrgthtitnTKERIERIEKNIldryhddelveHKIREVNDRWKRELERLENEKDDLERRIREL---EDELSQIGR 1185
Cdd:TIGR00606 589 --------------TRDRLAKLNKEL-----------ASLEQNKNHINNELESKEEQLSSYEDKLFDVcgsQDEESDLER 643
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1186 GNDKTENDITELKRKHAAeidklksdiSALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENEL 1265
Cdd:TIGR00606 644 LKEEIEKSSKQRAMLAGA---------TAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKST 714
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1266 ERE----KRDYDEKINSLYGQN---QKIKDEWDDFRN---DADKEIQKWKTDaytVRSEAKALETTNTALKAQ--LQAAN 1333
Cdd:TIGR00606 715 ESElkkkEKRRDEMLGLAPGRQsiiDLKEKEIPELRNklqKVNRDIQRLKND---IEEQETLLGTIMPEEESAkvCLTDV 791
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1334 DRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMD---------LESTQNRLRSLEDQHSTLQSDANKWRG 1404
Cdd:TIGR00606 792 TIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQheldtvvskIELNRKLIQDQQEQIQHLKSKTNELKS 871
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1405 E---LDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQA-DHLNQLASQFD 1480
Cdd:TIGR00606 872 EklqIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAqDKVNDIKEKVK 951
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 1481 TK---LTKLRNELQD-TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTT 1535
Cdd:TIGR00606 952 NIhgyMKDIENKIQDgKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQ 1010
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1725-2052 |
1.31e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1725 GFD----IANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTEThttinQKETRYRNIEDNLQDAEEERRALE---SR 1797
Cdd:COG4913 605 GFDnrakLAALEAELAELEEELAEAEERLEALEAELDALQERREAL-----QRLAEYSWDEIDVASAEREIAELEaelER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1798 LQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRdkeeqwdssRFQ 1877
Cdd:COG4913 680 LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLEL---------RAL 750
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1878 LETKMRESDSDTNKYQLQiASFESERQILTEKIKELDGALRLSDSK-VQDMKDDTDKLRRDLTKAESVENELRK--TIDI 1954
Cdd:COG4913 751 LEERFAAALGDAVERELR-ENLEERIDALRARLNRAEEELERAMRAfNREWPAETADLDADLESLPEYLALLDRleEDGL 829
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1955 QSKTSHEYQLLKDQ----LLNTQNELNGANNR-KQQLE--NELL-----------------NVRSEVRDYKQRVHDVNNR 2010
Cdd:COG4913 830 PEYEERFKELLNENsiefVADLLSKLRRAIREiKERIDplNDSLkripfgpgrylrlearpRPDPEVREFRQELRAVTSG 909
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1767287505 2011 VSELQRQLQdanteknrvEDRFLSVEKVVNTMRTTETDLRQQ 2052
Cdd:COG4913 910 ASLFDEELS---------EARFAALKRLIERLRSEEEESDRR 942
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
736-1012 |
1.32e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 50.40 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 736 LNRRVENLLRENNRLKSEvnPLKDKYRDLENEYNSTQRRIEEKETQIRysddirrniqkdldDLREKYDRVHTDNEkilg 815
Cdd:COG3206 154 ANALAEAYLEQNLELRRE--EARKALEFLEEQLPELRKELEEAEAALE--------------EFRQKNGLVDLSEE---- 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 816 elehaqkaAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLekngaRNNDELDKLRQTISDYESQIN 895
Cdd:COG3206 214 --------AKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 896 LLRRHNDELDTTIKGHQgkithlenelhsrsgeiEKLNDLNQRLQKEKQDILNQklkLDGDVQALKETIRKLENELEKLR 975
Cdd:COG3206 281 ELSARYTPNHPDVIALR-----------------AQIAALRAQLQQEAQRILAS---LEAELEALQAREASLQAQLAQLE 340
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1767287505 976 NENKELVGKEARA----RDAANQQLSRANLLNKeLEDTKQD 1012
Cdd:COG3206 341 ARLAELPELEAELrrleREVEVARELYESLLQR-LEEARLA 380
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1727-2101 |
1.37e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.40 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1727 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTT-------ETHTTINQKETRYRNIEDNLQDAEEERRALESRLQ 1799
Cdd:TIGR04523 315 ELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTnsesensEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQIN 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1800 SAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLR---TDLDNAHTDIRSLRDKEEQ------ 1870
Cdd:TIGR04523 395 DLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTnqdSVKELIIKNLDNTRESLETqlkvls 474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1871 ---------WDSSRFQLETKMRESDSDTNKYQL---QIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDL 1938
Cdd:TIGR04523 475 rsinkikqnLEQKQKELKSKEKELKKLNEEKKEleeKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFEL 554
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1939 TKaesveNELRKTIDIQSKTSHEYQLLKDQLLNTQNELngaNNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQL 2018
Cdd:TIGR04523 555 KK-----ENLEKEIDEKNKEIEELKQTQKSLKKKQEEK---QELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKEN 626
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2019 QDANTEKNRVEDRFLSVEKVVNTMRTTetdlrqqLETAKNEKRVATKELEDLKRRLAQLenerrnsSQLSDGWKKEKITL 2098
Cdd:TIGR04523 627 EKLSSIIKNIKSKKNKLKQEVKQIKET-------IKEIRNKWPEIIKKIKESKTKIDDI-------IELMKDWLKELSLH 692
|
...
gi 1767287505 2099 LKK 2101
Cdd:TIGR04523 693 YKK 695
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1879-2097 |
1.41e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.83 E-value: 1.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1879 ETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTID----I 1954
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGerarA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1955 QSKTSHEYQLLkDQLLNTQNeLNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLS 2034
Cdd:COG3883 95 LYRSGGSVSYL-DVLLGSES-FSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 2035 VEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKIT 2097
Cdd:COG3883 173 LEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
714-1270 |
1.57e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 50.29 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 714 LRDEMDEHTNSIqEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKEtqiRYSDDIRRnIQ 793
Cdd:PRK01156 188 LEEKLKSSNLEL-ENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKN---RYESEIKT-AE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 794 KDLDDLREKYDRVHTDNE---KILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLE 870
Cdd:PRK01156 263 SDLSMELEKNNYYKELEErhmKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYI 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 871 KNGARNnDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELhSRSGEIEKLNDlnQRLQKEKQDILNQK 950
Cdd:PRK01156 343 KKKSRY-DDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFI-SEILKIQEIDP--DAIKKELNEINVKL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 951 LKLDGDVQALKETIRKLENELEKLRNENKELVGK-----------EARARDAANQQLSRANLLNKELEDTKQDLKhstdv 1019
Cdd:PRK01156 419 QDISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgttlgEEKSNHIINHYNEKKSRLEEKIREIEIEVK----- 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1020 nkQLEQDIRDLKERLANIgKGGRISR--------DSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGE 1091
Cdd:PRK01156 494 --DIDEKIVDLKKRKEYL-ESEEINKsineynkiESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSW 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1092 IDIPSSGDVIhgrdgrdgrdagnrgthTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLER 1171
Cdd:PRK01156 571 LNALAVISLI-----------------DIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNN 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1172 RIRELEDELSQIGRGNDKTENditelKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVEN-------LKSVEDDL 1244
Cdd:PRK01156 634 KYNEIQENKILIEKLRGKIDN-----YKKQIAEIDSIIPDLKEITSR-INDIEDNLKKSRKALDDakanrarLESTIEIL 707
|
570 580
....*....|....*....|....*.
gi 1767287505 1245 RDKLNNLEKQLADslnRENELEREKR 1270
Cdd:PRK01156 708 RTRINELSDRIND---INETLESMKK 730
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1831-2090 |
1.73e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1831 LQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMREsdsdtnkyqlqiasfeserqiLTEKI 1910
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAA---------------------LARRI 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1911 KELDGALRLSDSKVQDMKDDTDKLRRDLtkaESVENELRKTIDIQSKTSHEYQLlkdQLLNTQNELNGANNRKQQLENEL 1990
Cdd:COG4942 72 RALEQELAALEAELAELEKEIAELRAEL---EAQKEELAELLRALYRLGRQPPL---ALLLSPEDFLDAVRRLQYLKYLA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1991 LNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDL 2070
Cdd:COG4942 146 PARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEEL 225
|
250 260
....*....|....*....|
gi 1767287505 2071 KRRLAQLENERRNSSQLSDG 2090
Cdd:COG4942 226 EALIARLEAEAAAAAERTPA 245
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
827-1121 |
1.93e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.44 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 827 AEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRrhnDELDT 906
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERR---EELGE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 907 TIKGHQ---GKITHLENELHSRS-----GEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNEN 978
Cdd:COG3883 91 RARALYrsgGSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAK 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 979 KELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGD 1058
Cdd:COG3883 171 AELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGAG 250
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 1059 RSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTIT 1121
Cdd:COG3883 251 AAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGSGGGSGGAGGV 313
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1125-1318 |
1.96e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 49.93 E-value: 1.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1125 ERIERIEKN------ILDRYHDDELVEHKIREVN-----DRWKRELERLENEKDDLERRIRELEDELSQIgrgndktEND 1193
Cdd:PRK05771 43 ERLRKLRSLltklseALDKLRSYLPKLNPLREEKkkvsvKSLEELIKDVEEELEKIEKEIKELEEEISEL-------ENE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1194 ITELKrKHAAEIDKLKS---DISALHDKHLSDL--------DDEKEQYGKAVENLKSVEDD----------LRDKLNNLE 1252
Cdd:PRK05771 116 IKELE-QEIERLEPWGNfdlDLSLLLGFKYVSVfvgtvpedKLEELKLESDVENVEYISTDkgyvyvvvvvLKELSDEVE 194
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 1253 KQLADSLNRENELEREK------RDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKAL 1318
Cdd:PRK05771 195 EELKKLGFERLELEEEGtpseliREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEAL 266
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1727-2217 |
2.07e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 49.90 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1727 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIED---NLQDAEEERRALESRLQSAKT 1803
Cdd:PRK01156 184 NIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSalnELSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1804 LLRSQEEALKQRDE-ERRQMK---SKMVAAELQARG---KEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDssrf 1876
Cdd:PRK01156 264 DLSMELEKNNYYKElEERHMKiinDPVYKNRNYINDyfkYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYN---- 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1877 QLETKMRESDsDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDK-LRRDLTKAESVENEL----RKT 1951
Cdd:PRK01156 340 DYIKKKSRYD-DLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEiLKIQEIDPDAIKKELneinVKL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1952 IDIQSKTSHEYQLL------KDQLLNTQNELNGANNRK---QQLENEllNVRSEVRDYKQRVHDVNNRVSELQRQLQDAN 2022
Cdd:PRK01156 419 QDISSKVSSLNQRIralrenLDELSRNMEMLNGQSVCPvcgTTLGEE--KSNHIINHYNEKKSRLEEKIREIEIEVKDID 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2023 TEKNRVEDR--FLSVEKVvntmrttetdlrQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLL- 2099
Cdd:PRK01156 497 EKIVDLKKRkeYLESEEI------------NKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLd 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2100 -KKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQ--QIAQLEMENGNRILELTNKQREEQERQ 2176
Cdd:PRK01156 565 sKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSyiDKSIREIENEANNLNNKYNEIQENKIL 644
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1767287505 2177 LIRMRQE----KGQIEKV--IENRERTHRNRIKQLEDQIAILRDQLD 2217
Cdd:PRK01156 645 IEKLRGKidnyKKQIAEIdsIIPDLKEITSRINDIEDNLKKSRKALD 691
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1900-2217 |
2.56e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.63 E-value: 2.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1900 ESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTI-DIQSKTSHEYQLLKD---QLLNTQNE 1975
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIkDLNDKLKKNKDKINKlnsDLSKINSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1976 LNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLET 2055
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDK 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2056 AKNEKRVATKELEDLKrrlAQLENERRNSSQLSDgWKKEKITLLKKIELLENEKRRTDAAIRETALQreaIEKSLNAMER 2135
Cdd:TIGR04523 192 IKNKLLKLELLLSNLK---KKIQKNKSLESQISE-LKKQNNQLKDNIEKKQQEINEKTTEISNTQTQ---LNQLKDEQNK 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2136 ENKELYKNcaqlqqqiaQLEMENGNRILELTNKQREEQERQLIRMRQEK---------GQIEKV------IENRERTHRN 2200
Cdd:TIGR04523 265 IKKQLSEK---------QKELEQNNKKIKELEKQLNQLKSEISDLNNQKeqdwnkelkSELKNQekkleeIQNQISQNNK 335
|
330
....*....|....*..
gi 1767287505 2201 RIKQLEDQIAILRDQLD 2217
Cdd:TIGR04523 336 IISQLNEQISQLKKELT 352
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
1124-1519 |
2.57e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 50.05 E-value: 2.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1124 KERIerieKNILDR--YHDDELVEHKIREVNDRWKRELERLE--------NEKDDLERRIREledELSQIGRGN-DKTEN 1192
Cdd:TIGR01612 606 KEKI----KNISDKneYIKKAIDLKKIIENNNAYIDELAKISpyqvpehlKNKDKIYSTIKS---ELSKIYEDDiDALYN 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1193 DITELKRKHA-------AEIDKLKSDISALHDK-----------HLSDLDDEKEQYGKA-VENLKSVEDDLRDKLNnleK 1253
Cdd:TIGR01612 679 ELSSIVKENAidntedkAKLDDLKSKIDKEYDKiqnmetatvelHLSNIENKKNELLDIiVEIKKHIHGEINKDLN---K 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1254 QLADSLNRENELErekrdydEKINslygqnqkikdewdDFRNDADkEIQKWKTDAYTVRSEAKALETTNTALKAQLQAAN 1333
Cdd:TIGR01612 756 ILEDFKNKEKELS-------NKIN--------------DYAKEKD-ELNKYKSKISEIKNHYNDQINIDNIKDEDAKQNY 813
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1334 DRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAdtkgNLVQKEMDLEStqNRLRSLEDQHSTLQSDANKWRGELdaalrEN 1413
Cdd:TIGR01612 814 DKSKEYIKTISIKEDEIFKIINEMKFMKDDFL----NKVDKFINFEN--NCKEKIDSEHEQFAELTNKIKAEI-----SD 882
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1414 DILKSNNTNMETDLTRLKNRLKSAE------DALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQ------------- 1474
Cdd:TIGR01612 883 DKLNDYEKKFNDSKSLINEINKSIEeeyqniNTLKKVDEYIKICENTKESIEKFHNKQNILKEILNKnidtikesnliek 962
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1767287505 1475 -LASQFDTKLTKLRNELQDTNDKLITSDTERNalRNELQKLSQELK 1519
Cdd:TIGR01612 963 sYKDKFDNTLIDKINELDKAFKDASLNDYEAK--NNELIKYFNDLK 1006
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1785-2208 |
2.76e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.58 E-value: 2.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1785 QDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARgKEAQLRHLNEQLKNLRTDLdNAHTDIRSL 1864
Cdd:TIGR00618 208 LCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLK-KQQLLKQLRARIEELRAQE-AVLEETQER 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1865 RDKEEQW----------DSSRFQ-------LETKMRESDSDTNKYQL---QIASFESERQILTEKIKELDgALRLSDSKV 1924
Cdd:TIGR00618 286 INRARKAaplaahikavTQIEQQaqrihteLQSKMRSRAKLLMKRAAhvkQQSSIEEQRRLLQTLHSQEI-HIRDAHEVA 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1925 QDMKDDTDK----------LRRDLTKAESVENELRKTIDIQSKTSH-------EYQLLKDQLLNTQNELNGANNRKQQLE 1987
Cdd:TIGR00618 365 TSIREISCQqhtltqhihtLQQQKTTLTQKLQSLCKELDILQREQAtidtrtsAFRDLQGQLAHAKKQQELQQRYAELCA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1988 NELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQlETAKNEKRVATKEL 2067
Cdd:TIGR00618 445 AAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGS-CIHPNPARQDIDNP 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2068 EDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQL 2147
Cdd:TIGR00618 524 GPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKL 603
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2148 QQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEK---------VIENRERTHRNRIKQLEDQ 2208
Cdd:TIGR00618 604 SEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLtalhalqltLTQERVREHALSIRVLPKE 673
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
774-932 |
2.90e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 48.00 E-value: 2.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 774 RIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEH--ARH 851
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVrnNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 852 LFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRrhnDELDTTIKGHQGKITHLENELHSRSGEIEK 931
Cdd:COG1579 91 YEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELE---AELEEKKAELDEELAELEAELEELEAEREE 167
|
.
gi 1767287505 932 L 932
Cdd:COG1579 168 L 168
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1817-2197 |
3.04e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 49.69 E-value: 3.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1817 EERRQMKSKMVAAELQA--RGKEAQLRhLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQL 1894
Cdd:COG5022 737 EDMRDAKLDNIATRIQRaiRGRYLRRR-YLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSY 815
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1895 QIASFESERQILTEKIkeldgaLRLSDSKVQDMKDDTDKLR--RDLTKAESVENELRKTIDIQSKTshEYQLLKDQLLNT 1972
Cdd:COG5022 816 LACIIKLQKTIKREKK------LRETEEVEFSLKAEVLIQKfgRSLKAKKRFSLLKKETIYLQSAQ--RVELAERQLQEL 887
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1973 QNELNGANNRKQ---QLENELLNVRSEVRdykqrvhdvNNRVSELQRQLQDANTEKNRVEDRFLSVEKvvnTMRTTETDL 2049
Cdd:COG5022 888 KIDVKSISSLKLvnlELESEIIELKKSLS---------SDLIENLEFKTELIARLKKLLNNIDLEEGP---SIEYVKLPE 955
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2050 RQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKrrtdaairetalqreaieKS 2129
Cdd:COG5022 956 LNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQEST------------------KQ 1017
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 2130 LNAMERENKELYKN----CAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERT 2197
Cdd:COG5022 1018 LKELPVEVAELQSAskiiSSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLEST 1089
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
609-764 |
3.18e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 609 DNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKL---------RASE 679
Cdd:COG1579 16 DSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLgnvrnnkeyEALQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 680 AERVAAEKARKFLEDELAKL--QASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNP- 756
Cdd:COG1579 96 KEIESLKRRISDLEDEILELmeRIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIPPe 175
|
....*...
gi 1767287505 757 LKDKYRDL 764
Cdd:COG1579 176 LLALYERI 183
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1791-2217 |
3.66e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 3.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1791 RRALESRLQ-SAKTLLRSQEEALKQRDEERRQMKSKMVAAELQA---RGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRD 1866
Cdd:COG4717 44 RAMLLERLEkEADELFKPQGRKPELNLKELKELEEELKEAEEKEeeyAELQEELEELEEELEELEAELEELREELEKLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1867 KEEQWDssrfqLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRlsdsKVQDMKDDTDKLRRDLTkaESVEN 1946
Cdd:COG4717 124 LLQLLP-----LYQELEALEAELAELPERLEELEERLEELRELEEELEELEA----ELAELQEELEELLEQLS--LATEE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1947 ELRKTIDiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRvhdvnNRVSELQRQLQDANT--- 2023
Cdd:COG4717 193 ELQDLAE-------ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALE-----ERLKEARLLLLIAAAlla 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2024 -----------------------------------EKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELE 2068
Cdd:COG4717 261 llglggsllsliltiagvlflvlgllallflllarEKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELL 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2069 DLKRRLAQLENERRNSSQLSDGWKKEKItLLKKIELLENEKRRTDAAIRETALQ---REAIEKSLNAMERENKELYKNCA 2145
Cdd:COG4717 341 ELLDRIEELQELLREAEELEEELQLEEL-EQEIAALLAEAGVEDEEELRAALEQaeeYQELKEELEELEEQLEELLGELE 419
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 2146 QLQQQIAQLEMEngNRILELtNKQREEQERQLIRMRQEKGQIEKVIENRERthRNRIKQLEDQIAILRDQLD 2217
Cdd:COG4717 420 ELLEALDEEELE--EELEEL-EEELEELEEELEELREELAELEAELEQLEE--DGELAELLQELEELKAELR 486
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1423-2111 |
3.80e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.16 E-value: 3.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1423 METDLTRLknrlksaEDALKELKNSLSHAKTEKER------LQNAFREKTKQAdHLNQLAsQFDTKLTKLRNELQDTNDK 1496
Cdd:COG1196 184 TEENLERL-------EDILGELERQLEPLERQAEKaeryreLKEELKELEAEL-LLLKLR-ELEAELEELEAELEELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1497 LITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ---TTIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDS 1573
Cdd:COG1196 255 LEELEAELAELEAELEELRLELEELELELEEAQAEEYellAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1574 TEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINfhtfvdggagyvdgvpggtsvigggpsaqrsgaydpSSGGVI 1653
Cdd:COG1196 335 LEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEA------------------------------------ELAEAE 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1654 GSGISGGPGGSDFGREIEIGRGDsdqsdvayprsvpfppsadfssgrpgAASAGGRVINNLDgtttvnmnggfDIANLEG 1733
Cdd:COG1196 379 EELEELAEELLEALRAAAELAAQ--------------------------LEELEEAEEALLE-----------RLERLEE 421
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1734 TLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALK 1813
Cdd:COG1196 422 ELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEA 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1814 QRDEERRQMKSKMVAAELQARGKE-------------AQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLET 1880
Cdd:COG1196 502 DYEGFLEGVKAALLLAGLRGLAGAvavligveaayeaALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDK 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1881 KMRESDSDTNKYQLQI----ASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQS 1956
Cdd:COG1196 582 IRARAALAAALARGAIgaavDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGS 661
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1957 KTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVE 2036
Cdd:COG1196 662 LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEEL 741
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2037 kvvntMRTTETDLRQQLETAKNEKRVAT--KELEDLKRRLAQLE-------------NERRN--SSQLSDGwKKEKITLL 2099
Cdd:COG1196 742 -----LEEEELLEEEALEELPEPPDLEEleRELERLEREIEALGpvnllaieeyeelEERYDflSEQREDL-EEARETLE 815
|
730
....*....|..
gi 1767287505 2100 KKIELLENEKRR 2111
Cdd:COG1196 816 EAIEEIDRETRE 827
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1775-2025 |
4.05e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 48.86 E-value: 4.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1775 TRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAaelQARGKEAQLRHLNEQLKNLRTDL 1854
Cdd:PHA02562 174 DKIRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVE---EAKTIKAEIEELTDELLNLVMDI 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1855 DNAHTDIRSLRDKEEQWDS--SRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQdmkddtd 1932
Cdd:PHA02562 251 EDPSAALNKLNTAAAKIKSkiEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAID------- 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1933 klrrdltKAESVENELRKtidiQSKTSHEyqlLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVS 2012
Cdd:PHA02562 324 -------ELEEIMDEFNE----QSKKLLE---LKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELD 389
|
250
....*....|...
gi 1767287505 2013 ELQRQLQDANTEK 2025
Cdd:PHA02562 390 KIVKTKSELVKEK 402
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
642-806 |
4.26e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.23 E-value: 4.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 642 RLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQK--------SSTDDARK 713
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKyeeqlgnvRNNKEYEA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 714 LRDEMDEHTNSIqEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRysdDIRRNIQ 793
Cdd:COG1579 94 LQKEIESLKRRI-SDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELE---AEREELA 169
|
170
....*....|....
gi 1767287505 794 KDLD-DLREKYDRV 806
Cdd:COG1579 170 AKIPpELLALYERI 183
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
346-1013 |
4.32e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 49.05 E-value: 4.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 346 LSLEDENDRLRREFEryANDSK-----DKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRKQFSDLKTHTEEDLDKQK 420
Cdd:pfam10174 6 RDLQRENELLRRELD--IKESKlgssmNSIKTFWSPELKKERALRKEEAARISVLKEQYRVTQEENQHLQLTIQALQDEL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 421 aeftRAIRNVNNISrNAAFSAGAGDGLGLYGLEDGGDVN--RTTNNYEKVFIE------TIKRM-------NGTGGAGSA 485
Cdd:pfam10174 84 ----RAQRDLNQLL-QQDFTTSPVDGEDKFSTPELTEENfrRLQSEHERQAKElfllrkTLEEMelrietqKQTLGARDE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 486 SSADLLEELrkiRGGGSSEGDAELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQG--ALKKLH 563
Cdd:pfam10174 159 SIKKLLEML---QSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELHRRNQLQPDPAKtkALQTVI 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 564 EMA-------QDSEKNVDGTVSIKRTRSLSPGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENa 636
Cdd:pfam10174 236 EMKdtkisslERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLET- 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 637 dearrrLDKQFADAKREISNLQKSVDEAERnsrrtddklRAS------EAERVAAEKARKFLEDELAKLQASFQKSSTDD 710
Cdd:pfam10174 315 ------LTNQNSDCKQHIEVLKESLTAKEQ---------RAAilqtevDALRLRLEEKESFLNKKTKQLQDLTEEKSTLA 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 711 A--RKLRDEMDehtnsIQEEfktRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNST--------------QRR 774
Cdd:pfam10174 380 GeiRDLKDMLD-----VKER---KINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTdtalttleealsekERI 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 775 IEEKETQIRYSDDIRR----NIQKDLDDLREKYDRVHTD-NEKILGELEHAQKAAHLAEQQLKeikiqRDDYQKQKDEHA 849
Cdd:pfam10174 452 IERLKEQREREDRERLeeleSLKKENKDLKEKVSALQPElTEKESSLIDLKEHASSLASSGLK-----KDSKLKSLEIAV 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 850 RHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQtisdYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEI 929
Cdd:pfam10174 527 EQKKEECSKLENQLKKAHNAEEAVRTNPEINDRIRL----LEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKI 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 930 EKLNDLNQRLQKEkQDILNQKLKldgDVQALKEtiRKLENELEKLRNEnkelvgKEARARDAANQQLSRanlLNKELEDT 1009
Cdd:pfam10174 603 AELESLTLRQMKE-QNKKVANIK---HGQQEMK--KKGAQLLEEARRR------EDNLADNSQQLQLEE---LMGALEKT 667
|
....
gi 1767287505 1010 KQDL 1013
Cdd:pfam10174 668 RQEL 671
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
606-850 |
6.22e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.90 E-value: 6.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 606 RNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLraseAERVAA 685
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL----GERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 686 EKARKFLEDELAKLQASfqKSSTDDARKLrdemdehtnsiqeefkTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLE 765
Cdd:COG3883 95 LYRSGGSVSYLDVLLGS--ESFSDFLDRL----------------SALSKIADADADLLEELKADKAELEAKKAELEAKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 766 NEYNSTQRRIEEKETQIrysDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQK 845
Cdd:COG3883 157 AELEALKAELEAAKAEL---EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
....*
gi 1767287505 846 DEHAR 850
Cdd:COG3883 234 AAAAA 238
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1325-1583 |
6.54e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 48.36 E-value: 6.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1325 LKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELadtkgNLVQKEMD-LESTQNRLRSLEDQHSTLQSDANKWR 1403
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEY-----NNAMDDYNnLKSALNELSSLEDMKNRYESEIKTAE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1404 GELDAALRENdilksnntnmetdltrlkNRLKSAEDALKELKNSLSHAKteKERLQNAFREKtKQADHLNQLASQFDTKL 1483
Cdd:PRK01156 263 SDLSMELEKN------------------NYYKELEERHMKIINDPVYKN--RNYINDYFKYK-NDIENKKQILSNIDAEI 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1484 TKLRN------ELQDTNDKLITSDTERNALRNELQKLSQ-ELKFGN-----EQIQRKSDEYQTTIDDLAhshrvSEDSRL 1551
Cdd:PRK01156 322 NKYHAiikklsVLQKDYNDYIKKKSRYDDLNNQILELEGyEMDYNSylksiESLKKKIEEYSKNIERMS-----AFISEI 396
|
250 260 270
....*....|....*....|....*....|....
gi 1767287505 1552 NALQEL--EARKYEINDLTSRLDSTEQRLATLQQ 1583
Cdd:PRK01156 397 LKIQEIdpDAIKKELNEINVKLQDISSKVSSLNQ 430
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
511-702 |
7.40e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 7.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 511 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSlspgkt 590
Cdd:COG3883 40 DALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRSGGSVSYLDVLLGSES------ 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 591 plpPSEALR--AVRNTFRNKDND-IQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERN 667
Cdd:COG3883 114 ---FSDFLDrlSALSKIADADADlLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAE 190
|
170 180 190
....*....|....*....|....*....|....*
gi 1767287505 668 SRRTDDKLRASEAERVAAEKARKFLEDELAKLQAS 702
Cdd:COG3883 191 EAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAA 225
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
596-892 |
7.97e-05 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 47.59 E-value: 7.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 596 EALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKL 675
Cdd:COG4372 66 EELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 676 RASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVN 755
Cdd:COG4372 146 AEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKD 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 756 PLKDKYRDLENEYNSTQRRIEEKETQIrySDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIK 835
Cdd:COG4372 226 SLEAKLGLALSALLDALELEEDKEELL--EEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLN 303
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 836 IQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYES 892
Cdd:COG4372 304 LAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLS 360
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1158-1334 |
8.07e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 8.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1158 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA---AEIDKLKSDISALHDK---------------- 1218
Cdd:COG3883 24 ELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDklqAEIAEAEAEIEERREElgeraralyrsggsvs 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1219 ----------------HLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQ 1282
Cdd:COG3883 104 yldvllgsesfsdfldRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEAL 183
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 1283 NQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAAND 1334
Cdd:COG3883 184 LAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1405-1865 |
8.42e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 8.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1405 ELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDT--K 1482
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1483 LTKLRNELQDTN---DKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDEYQttiddlahshrvsEDSRLNALQELEA 1559
Cdd:COG4717 134 LEALEAELAELPerlEELEERLEELRELEEELEELEAEL----AELQEELEELL-------------EQLSLATEEELQD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1560 RKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQ-----SSANRVINFHTFVDGGAGYVDGVPGGTSVIG 1634
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAAleerlKEARLLLLIAAALLALLGLGGSLLSLILTIA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1635 GGPSAQRSGAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPRSVPFPPSADFSSGRPGAASAGGRVINNL 1714
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1715 DGtttvnMNGGFDIANLEGTLQSLLNKIeKLEMErNELRDTLARmkkkttetHTTINQKETRYRNIEDNLQDAEEERRAL 1794
Cdd:COG4717 357 EE-----LEEELQLEELEQEIAALLAEA-GVEDE-EELRAALEQ--------AEEYQELKEELEELEEQLEELLGELEEL 421
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1795 ESRLQ--SAKTLLRSQEEALKQRDEERRQMKSKM--VAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLR 1865
Cdd:COG4717 422 LEALDeeELEEELEELEEELEELEEELEELREELaeLEAELEQLEEDGELAELLQELEELKAELRELAEEWAALK 496
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1372-1734 |
8.95e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 8.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1372 VQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLsha 1451
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL--- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1452 kteKERLQNAFREKTkQADHLNQL--ASQFDTKLTKL--RNELQDTNDKLItsdternalrNELQKLSQELKFGNEQIQR 1527
Cdd:COG3883 89 ---GERARALYRSGG-SVSYLDVLlgSESFSDFLDRLsaLSKIADADADLL----------EELKADKAELEAKKAELEA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1528 KSDEYQTTIDDLAhshrvsedsrlNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSAN 1607
Cdd:COG3883 155 KLAELEALKAELE-----------AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAA 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1608 RVINFHTFVDGGAGYVDGVPGGTSVIGGGPSAQRSGAYD-PSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPR 1686
Cdd:COG3883 224 AAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAgAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGS 303
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1767287505 1687 SVPFPPSADFSSGRPGAASAGGRVINNLDGTTTVNMNGGFDIANLEGT 1734
Cdd:COG3883 304 GGGSGGAGGVGSGGGAGAVVGGASAGGGGGSGGGGGSSGGGSGGGGGG 351
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
611-1034 |
1.09e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.66 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 611 DIQQLERKLKIAES---QVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEK 687
Cdd:TIGR00618 387 QKTTLTQKLQSLCKeldILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQ 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 688 ARKFLEDELAKLQASFQKSStdDARKLRDEMDEHTNSIQEEFKTRIDELN-------------RRVENLLRENNRLKSEv 754
Cdd:TIGR00618 467 SLKEREQQLQTKEQIHLQET--RKKAVVLARLLELQEEPCPLCGSCIHPNparqdidnpgpltRRMQRGEQTYAQLETS- 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 755 npLKDKYRDLENEYNSTQRrIEEKETQIRYSDDI----RRNIQKDLDDLREKYDRVHTDNEKilgELEHAQKAAHLAEQQ 830
Cdd:TIGR00618 544 --EEDVYHQLTSERKQRAS-LKEQMQEIQQSFSIltqcDNRSKEDIPNLQNITVRLQDLTEK---LSEAEDMLACEQHAL 617
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 831 LKEIKIQRDDYQK-----QKDEHARHLFDIRHKLETEI----------KGRQDLEKNGARNNDELDKL----RQTISDYE 891
Cdd:TIGR00618 618 LRKLQPEQDLQDVrlhlqQCSQELALKLTALHALQLTLtqervrehalSIRVLPKELLASRQLALQKMqsekEQLTYWKE 697
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 892 --SQINLLRRhndELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQA---------- 959
Cdd:TIGR00618 698 mlAQCQTLLR---ELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFnnneevtaal 774
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 960 -----LKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANL----LNKELEDTKQDLKHSTDVNKQLEQDIRDL 1030
Cdd:TIGR00618 775 qtgaeLSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLqcetLVQEEEQFLSRLEEKSATLGEITHQLLKY 854
|
....
gi 1767287505 1031 KERL 1034
Cdd:TIGR00618 855 EECS 858
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
790-1037 |
1.10e-04 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 46.83 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 790 RNIQKDLDDLREKYDRVHTDNEKILGELEHAQKaahlaeqQLKEIKIQRDDYQKQKDEharhlfdIRHKLETEIKGRQDL 869
Cdd:COG1340 4 DELSSSLEELEEKIEELREEIEELKEKRDELNE-------ELKELAEKRDELNAQVKE-------LREEAQELREKRDEL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 870 EKNGARNNDELDKLRQTISDYESQINLLRRHNDELDT---TIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQ--KEKQ 944
Cdd:COG1340 70 NEKVKELKEERDELNEKLNELREELDELRKELAELNKaggSIDKLRKEIERLEWRQQTEVLSPEEEKELVEKIKelEKEL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 945 DILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLE 1024
Cdd:COG1340 150 EKAKKALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADELRKEADELHKEIVEAQEKADELH 229
|
250
....*....|...
gi 1767287505 1025 QDIRDLKERLANI 1037
Cdd:COG1340 230 EEIIELQKELREL 242
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1257-1468 |
1.29e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 47.32 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1257 DSLNRE--NELEREKRDYDEKINSLygqNQKIKDEwDDFRNDADKeiqkwKTDAYTVRSEAKALETTNTA--LKAQLQAA 1332
Cdd:PHA02562 169 DKLNKDkiRELNQQIQTLDMKIDHI---QQQIKTY-NKNIEEQRK-----KNGENIARKQNKYDELVEEAktIKAEIEEL 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1333 NDRIDHLTKTVNDHTSKVRDLTsqvrhleDELADTKGNL--VQKEM--------------DLESTQNRLRSLEDQHSTLQ 1396
Cdd:PHA02562 240 TDELLNLVMDIEDPSAALNKLN-------TAAAKIKSKIeqFQKVIkmyekggvcptctqQISEGPDRITKIKDKLKELQ 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1397 ---SDANKWRGELdaALRENDI---------LKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFRE 1464
Cdd:PHA02562 313 hslEKLDTAIDEL--EEIMDEFneqskklleLKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDK 390
|
....
gi 1767287505 1465 KTKQ 1468
Cdd:PHA02562 391 IVKT 394
|
|
| PRK10361 |
PRK10361 |
DNA recombination protein RmuC; Provisional |
1356-1516 |
1.33e-04 |
|
DNA recombination protein RmuC; Provisional
Pssm-ID: 182409 [Multi-domain] Cd Length: 475 Bit Score: 46.90 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1356 QVRHLEDELADtkgnlvQKEMDLESTQNRLRSLEDQHstlqsdankWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1435
Cdd:PRK10361 27 HAQQKAEQLAE------REEMVAELSAAKQQITQSEH---------WRAECELLNNEVRSLQSINTSLEADLREVTTRME 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1436 S----AEDALKELKNSLSHAKTEKERLQN-AFREKTKQADH-----LNQLASQFDTKLTKLRNELQDTNDKlitSDTERN 1505
Cdd:PRK10361 92 AaqqhADDKIRQMINSEQRLSEQFENLANrIFEHSNRRVDEqnrqsLNSLLSPLREQLDGFRRQVQDSFGK---EAQERH 168
|
170
....*....|.
gi 1767287505 1506 ALRNELQKLSQ 1516
Cdd:PRK10361 169 TLAHEIRNLQQ 179
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1311-1594 |
1.70e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 47.21 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1311 VRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSqVRHLEDELADTkgnlvqkEMDLESTQNRLRSLED 1390
Cdd:PRK11281 78 QKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLS-LRQLESRLAQT-------LDQLQNAQNDLAEYNS 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1391 QHSTLQSDANKWRGELDAALRE----NDILKSNNTNMETDLTRLKNRLkSAEDALKELKNSLSHAKTE-KERLQNAFrek 1465
Cdd:PRK11281 150 QLVSLQTQPERAQAALYANSQRlqqiRNLLKGGKVGGKALRPSQRVLL-QAEQALLNAQNDLQRKSLEgNTQLQDLL--- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1466 TKQADHLNQLASQFDTKLTKLRNELqdtNDKLITSdTERNALRNELQKLSQELKfGNEQIQRksdeyqttidDLAHSHRV 1545
Cdd:PRK11281 226 QKQRDYLTARIQRLEHQLQLLQEAI---NSKRLTL-SEKTVQEAQSQDEAARIQ-ANPLVAQ----------ELEINLQL 290
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1767287505 1546 SEDsRLNALQELearkyeiNDLTSRLDSTEQRLATLQQdyikadSERDI 1594
Cdd:PRK11281 291 SQR-LLKATEKL-------NTLTQQNLRVKNWLDRLTQ------SERNI 325
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1723-2130 |
1.76e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1723 NGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTInqkETRYRNIEDNLQDAEEERRALESRLQSAK 1802
Cdd:COG4913 335 NGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEF---AALRAEAAALLEALEEELEALEEALAEAE 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1803 TLLRSQEEALKQRDEERRQMKSKMV---AAELQARgkeaqlRHLNEQLKNLRTDLDNA--HTDIRslrDKEEQW------ 1871
Cdd:COG4913 412 AALRDLRRELRELEAEIASLERRKSnipARLLALR------DALAEALGLDEAELPFVgeLIEVR---PEEERWrgaier 482
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1872 -----------------DSSRF----QLETKMRESDSDTNKYQLQIASFESERqiLTEKikeldgaLRLSDSKVQDMKDD 1930
Cdd:COG4913 483 vlggfaltllvppehyaAALRWvnrlHLRGRLVYERVRTGLPDPERPRLDPDS--LAGK-------LDFKPHPFRAWLEA 553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1931 TDKLRRDLTKAESVEnELRK-----TIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQ--QLENELLNVRSEVRDYKQR 2003
Cdd:COG4913 554 ELGRRFDYVCVDSPE-ELRRhpraiTRAGQVKGNGTRHEKDDRRRIRSRYVLGFDNRAKlaALEAELAELEEELAEAEER 632
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2004 VHDVNNRVSELQRQLQDANTEKNRVEDRfLSVEKVVNTMRTTETD-------------LRQQLETAKNEKRVATKELEDL 2070
Cdd:COG4913 633 LEALEAELDALQERREALQRLAEYSWDE-IDVASAEREIAELEAElerldassddlaaLEEQLEELEAELEELEEELDEL 711
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2071 KRRLAQLENERRNSSQLsdgwKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSL 2130
Cdd:COG4913 712 KGEIGRLEKELEQAEEE----LDELQDRLEAAEDLARLELRALLEERFAAALGDAVEREL 767
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1831-2189 |
1.87e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.04 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1831 LQARGKEAQLRHLNE---QLKNLRTDLDNAHtdirSLRDKEEQW-DSSRFQLETKMRE----SDSDTNKYQLQIASFESE 1902
Cdd:pfam15921 68 IAYPGKEHIERVLEEyshQVKDLQRRLNESN----ELHEKQKFYlRQSVIDLQTKLQEmqmeRDAMADIRRRESQSQEDL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1903 RQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRkTIDIQSKTSHEYQLLKDQLLNTQNelngANNR 1982
Cdd:pfam15921 144 RNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIR-SILVDFEEASGKKIYEHDSMSTMH----FRSL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1983 KQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDA-----NTEKNRVEdRFLSVEKV--------VNTMRTTETDL 2049
Cdd:pfam15921 219 GSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKielllQQHQDRIE-QLISEHEVeitgltekASSARSQANSI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2050 RQQL----ETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDG--WKKEKITLLKKIELLENEKRRtDAAIRETALQR 2123
Cdd:pfam15921 298 QSQLeiiqEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDkiEELEKQLVLANSELTEARTER-DQFSQESGNLD 376
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 2124 EAIEKSLNAMERENKELyknCAQLQQQIAQLEMENGNRIL------ELTNKQREEQ--ERQLIRMRQE-KGQIEK 2189
Cdd:pfam15921 377 DQLQKLLADLHKREKEL---SLEKEQNKRLWDRDTGNSITidhlrrELDDRNMEVQrlEALLKAMKSEcQGQMER 448
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1361-1725 |
2.17e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.98 E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1361 EDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDA 1440
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1441 LKELKNSLSHAktekERLQNA--FREKTKQADHLNQLASQFDTKLtklrNELQDTNDKLITSDTERNALRNELQKLSQEL 1518
Cdd:COG3883 95 LYRSGGSVSYL----DVLLGSesFSDFLDRLSALSKIADADADLL----EELKADKAELEAKKAELEAKLAELEALKAEL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1519 KFGNEQIQRKSDEYQTTIDDLAhshrVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDA 1598
Cdd:COG3883 167 EAAKAELEAQQAEQEALLAQLS----AEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1599 LRrfQSSANRVINFHTFVDGGAGYVDGVPGGTSVIGGGPSAQRSGAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSD 1678
Cdd:COG3883 243 AA--SAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGSGGGSGGAGGVGSGGGAG 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1767287505 1679 QSDVAYPRSVPFPPSADFSSGRPGAASAGGRVINNLDGTTTVNMNGG 1725
Cdd:COG3883 321 AVVGGASAGGGGGSGGGGGSSGGGSGGGGGGGGGGGGSSSGGGGGGV 367
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
737-982 |
2.17e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.55 E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 737 NRR--VENLL------RENNRLKSEVNPLKDKYRDLENEYNSTQRRIEekeTQIRYSDDIRRNIQKDLDDLREKYDRvHT 808
Cdd:PHA02562 151 ARRklVEDLLdisvlsEMDKLNKDKIRELNQQIQTLDMKIDHIQQQIK---TYNKNIEEQRKKNGENIARKQNKYDE-LV 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 809 DNEKILgeleHAQKAahLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGarnndELDKLRQTIS 888
Cdd:PHA02562 227 EEAKTI----KAEIE--ELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGG-----VCPTCTQQIS 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 889 DYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILN--------QKL--KLDGDVQ 958
Cdd:PHA02562 296 EGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITlvdkakkvKAAieELQAEFV 375
|
250 260
....*....|....*....|....
gi 1767287505 959 ALKETIRKLENELEKLRNENKELV 982
Cdd:PHA02562 376 DNAEELAKLQDELDKIVKTKSELV 399
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
611-950 |
2.18e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 46.74 E-value: 2.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 611 DIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKsvdeaerNSRRTDDKLRASEAERVAAEKARK 690
Cdd:pfam10174 381 EIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQT-------DSSNTDTALTTLEEALSEKERIIE 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 691 FLEDELAKLQASFQKSStDDARKLRDEMDEHTNSIQEEF---KTRIDELNRRVENL----LRENNRLKS---EVNPLKDK 760
Cdd:pfam10174 454 RLKEQREREDRERLEEL-ESLKKENKDLKEKVSALQPELtekESSLIDLKEHASSLassgLKKDSKLKSleiAVEQKKEE 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 761 YRDLENEYNSTQRRIEEKETQIRYSDDIrRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKiqrDD 840
Cdd:pfam10174 533 CSKLENQLKKAHNAEEAVRTNPEINDRI-RLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELE---SL 608
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 841 YQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISdYESQINLLRRHNDELDTTikghQGKITHLEN 920
Cdd:pfam10174 609 TLRQMKEQNKKVANIKHGQQEMKKKGAQLLEEARRREDNLADNSQQLQ-LEELMGALEKTRQELDAT----KARLSSTQQ 683
|
330 340 350
....*....|....*....|....*....|
gi 1767287505 921 ELHSRSGEiekLNDLNQRLQKEKQDILNQK 950
Cdd:pfam10174 684 SLAEKDGH---LTNLRAERRKQLEEILEMK 710
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
511-701 |
2.27e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 511 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLH-EMAQDSEKNVDGTVSIKRTRSLSPGK 589
Cdd:COG4942 44 AALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRaELEAQKEELAELLRALYRLGRQPPLA 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 590 TPLPPSEALRAVRNT------FRNKDNDIQQLERKLKIAESQVKEflnkfenADEARRRLDKQFADAKREISNLQKSVDE 663
Cdd:COG4942 124 LLLSPEDFLDAVRRLqylkylAPARREQAEELRADLAELAALRAE-------LEAERAELEALLAELEEERAALEALKAE 196
|
170 180 190
....*....|....*....|....*....|....*...
gi 1767287505 664 AERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQA 701
Cdd:COG4942 197 RQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
596-1032 |
2.40e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.50 E-value: 2.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 596 EALRAVRNTFRNKDNDIQQLERKlKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKL 675
Cdd:TIGR00618 466 QSLKEREQQLQTKEQIHLQETRK-KAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSE 544
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 676 RASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARkLRDEMDEHTNsIQEEFKTRIDELNRRVENLLRENNRLKSEVN 755
Cdd:TIGR00618 545 EDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNR-SKEDIPNLQN-ITVRLQDLTEKLSEAEDMLACEQHALLRKLQ 622
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 756 PLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRniqkdlDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIK 835
Cdd:TIGR00618 623 PEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQ------ERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWK 696
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 836 iqrddyqkqkdEHARHLFDIRHKLETEIKgrqdlekngarnndELDKLRQTISD-YESQINLLRRHNDELDTTIKGHQG- 913
Cdd:TIGR00618 697 -----------EMLAQCQTLLRELETHIE--------------EYDREFNEIENaSSSLGSDLAAREDALNQSLKELMHq 751
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 914 ---KITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENEL---EKLRNENKELVGKEAR 987
Cdd:TIGR00618 752 artVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIpsdEDILNLQCETLVQEEE 831
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1767287505 988 ardaanQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 1032
Cdd:TIGR00618 832 ------QFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1743-2070 |
2.48e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 46.04 E-value: 2.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1743 EKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALK-------QR 1815
Cdd:pfam07888 69 EQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELEEDIKtltqrvlER 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1816 DEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQ 1895
Cdd:pfam07888 149 ETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRK 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1896 IASFESerqiLTEKIKELDGALRLSDSKVQDMKDDTDKL--RRDLTKAEsvenelrktidiqsktSHEYQLLKDQLLNTQ 1973
Cdd:pfam07888 229 EAENEA----LLEELRSLQERLNASERKVEGLGEELSSMaaQRDRTQAE----------------LHQARLQAAQLTLQL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1974 NELN-----GANNRKQQLENELLNVRSEvrdyKQRVHDVNNRVSELQRQLQDANTEKNRVEDRfLSVEKVVNTMRTTETd 2048
Cdd:pfam07888 289 ADASlalreGRARWAQERETLQQSAEAD----KDRIEKLSAELQRLEERLQEERMEREKLEVE-LGREKDCNRVQLSES- 362
|
330 340
....*....|....*....|..
gi 1767287505 2049 lRQQLETAKNEKRVATKELEDL 2070
Cdd:pfam07888 363 -RRELQELKASLRVAQKEKEQL 383
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
519-1319 |
2.52e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.67 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 519 ESIERNIELESRgDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSE-KNVDGTVSIKRTRSLSPGKTPLPPSEA 597
Cdd:PTZ00121 1082 DAKEDNRADEAT-EEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEaRKAEDARKAEEARKAEDAKRVEIARKA 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 598 LRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKfenADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRA 677
Cdd:PTZ00121 1161 EDARKAEEARKAEDAKKAEAARKAEEVRKAEELRK---AEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKK 1237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 678 SEAERVAAEKAR------KFLEDELAKLQASFQKSSTDDARKLR-----DEMDEHTNSIQEEFKTRIDELNRRVENllre 746
Cdd:PTZ00121 1238 DAEEAKKAEEERnneeirKFEEARMAHFARRQAAIKAEEARKADelkkaEEKKKADEAKKAEEKKKADEAKKKAEE---- 1313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 747 nnrlKSEVNPLKDKYRDLENEYNSTQRRIEEKEtqiRYSDDIRRNIQKDLDDLREKYDRVHTDNEKIlgelEHAQKAAHL 826
Cdd:PTZ00121 1314 ----AKKADEAKKKAEEAKKKADAAKKKAEEAK---KAAEAAKAEAEAAADEAEAAEEKAEAAEKKK----EEAKKKADA 1382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 827 AEQQLKEIKiqRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNgARNNDELDKLRQTISDYESQINLLRRHNDELDT 906
Cdd:PTZ00121 1383 AKKKAEEKK--KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKK-AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA 1459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 907 TIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQAlkETIRKLENELEKLRNENKELVGKEA 986
Cdd:PTZ00121 1460 EEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKA--DEAKKAEEAKKADEAKKAEEAKKAD 1537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 987 RARDAanQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDiRDLKERLANIGKggRISRDSTTGTDGGAFGDRSSVADPS 1066
Cdd:PTZ00121 1538 EAKKA--EEKKKADELKKAEELKKAEEKKKAEEAKKAEED-KNMALRKAEEAK--KAEEARIEEVMKLYEEEKKMKAEEA 1612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1067 RTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVihgRDGRDGRDAGNRGTHTITNTKERIERiEKNILDRYHDDELVEH 1146
Cdd:PTZ00121 1613 KKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEK---KKAEELKKAEEENKIKAAEEAKKAEE-DKKKAEEAKKAEEDEK 1688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1147 KIREVNDRWKRELERLENEKDDLERRIRELEdelsQIGRGNDKTENDITELKRKhaAEIDKLKSDisalhdkhlsDLDDE 1226
Cdd:PTZ00121 1689 KAAEALKKEAEEAKKAEELKKKEAEEKKKAE----ELKKAEEENKIKAEEAKKE--AEEDKKKAE----------EAKKD 1752
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1227 KEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENE---LEREKRDYDEKINSLYGQ--NQKIKDEWDDFRNDADKEI 1301
Cdd:PTZ00121 1753 EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEkrrMEVDKKIKDIFDNFANIIegGKEGNLVINDSKEMEDSAI 1832
|
810
....*....|....*...
gi 1767287505 1302 QKWKTDAYTVRSEAKALE 1319
Cdd:PTZ00121 1833 KEVADSKNMQLEEADAFE 1850
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1308-1603 |
2.74e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.16 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1308 AYTVRSEAKALETTNTALKA-QLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAD--TKGNLVQKEMDLESTQNR 1384
Cdd:COG3206 141 SYTSPDPELAAAVANALAEAyLEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQ 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1385 LRSLEDQHSTLQSDANkwrgELDAALRendilksnntnmetdltRLKNRLKSAEDALKELKNSlshaktekERLQNAfre 1464
Cdd:COG3206 221 LSELESQLAEARAELA----EAEARLA-----------------ALRAQLGSGPDALPELLQS--------PVIQQL--- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1465 ktkqadhLNQLAsQFDTKLTKLRNELQDTNDKLItsdternALRNELQKLSQELKfgnEQIQRKSDEYQTTIDDLAhshr 1544
Cdd:COG3206 269 -------RAQLA-ELEAELAELSARYTPNHPDVI-------ALRAQIAALRAQLQ---QEAQRILASLEAELEALQ---- 326
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 1545 vsedsrlNALQELEARKYEINDLTSRLDSTEQRLATLQQDYikaDSERDILSDALRRFQ 1603
Cdd:COG3206 327 -------AREASLQAQLAQLEARLAELPELEAELRRLEREV---EVARELYESLLQRLE 375
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
883-1037 |
2.77e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 46.24 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 883 LRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRsgEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKE 962
Cdd:PRK12705 39 LQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQR--EEERLVQKEEQLDARAEKLDNLENQLEEREKALSA 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 963 TIRKLENELEKLRNENKELVGKEaraRDAANQQLsrANLLNKELEDTKQDLKhstdvnKQLEQDIRDLKERLANI 1037
Cdd:PRK12705 117 RELELEELEKQLDNELYRVAGLT---PEQARKLL--LKLLDAELEEEKAQRV------KKIEEEADLEAERKAQN 180
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1967-2353 |
2.83e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.59 E-value: 2.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1967 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTE----KNRVEDRFLSVEKVVNTM 2042
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEiaeaEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2043 RTTETDLR--QQLETAKNekrvatkeLEDLKRRLAQLenerrnsSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETA 2120
Cdd:COG3883 96 YRSGGSVSylDVLLGSES--------FSDFLDRLSAL-------SKIADADADLLEELKADKAELEAKKAELEAKLAELE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2121 LQREAIEKSLNAMERENKELykncaqlqqqiaqlemengNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRN 2200
Cdd:COG3883 161 ALKAELEAAKAELEAQQAEQ-------------------EALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2201 RIKQLEDQIAILRDQLDGERRRRREYVDRSMVNDIGRLGSNVLGIRNSYGDNSIDAIINGGSRSVGFYPRSTFASNPLTP 2280
Cdd:COG3883 222 AAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASG 301
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 2281 PLGSSTPTHRPHVTDFRSAVDAGSSYRRPISTIEDSGSVYGGSIRDRDSVYGGGGRDSSFGTRAGDSISRAGV 2353
Cdd:COG3883 302 GSGGGSGGAGGVGSGGGAGAVVGGASAGGGGGSGGGGGSSGGGSGGGGGGGGGGGGSSSGGGGGGVGLSVGGG 374
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
1797-2077 |
2.86e-04 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 46.00 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1797 RLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNlrtDLDNAhtdiRSLRDKEEQwdsSRF 1876
Cdd:pfam09726 399 RLEQDIKKLKAELQASRQTEQELRSQISSLTSLERSLKSELGQLRQENDLLQT---KLHNA----VSAKQKDKQ---TVQ 468
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1877 QLETKMRESDSDTNKYQLQIASfESERqilteKIKELDGALRLSDSKVQDMKDDTDKLRRdltKAESVENELRKTidiqs 1956
Cdd:pfam09726 469 QLEKRLKAEQEARASAEKQLAE-EKKR-----KKEEEATAARAVALAAASRGECTESLKQ---RKRELESEIKKL----- 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1957 ktSHEYQLLKDQLlntqnelngannrkQQLENELlnvrSEVRDYKQRVHDVNNRVSELQrqlqdANTEKNRVEDRFLSVE 2036
Cdd:pfam09726 535 --THDIKLKEEQI--------------RELEIKV----QELRKYKESEKDTEVLMSALS-----AMQDKNQHLENSLSAE 589
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1767287505 2037 KVVN-TMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQL 2077
Cdd:pfam09726 590 TRIKlDLFSALGDAKRQLEIAQGQIYQKDQEIKDLKQKIAEV 631
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1780-2217 |
2.89e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.48 E-value: 2.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1780 IEDNLQDAE----EERRALEsrlqsAKTLLRSQEEALKQRDEErrqmKSKMVAAelqargkeAQLRHLNEQLKNLRTDLD 1855
Cdd:COG3096 227 VRKAFQDMEaalrENRMTLE-----AIRVTQSDRDLFKHLITE----ATNYVAA--------DYMRHANERRELSERALE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1856 NAhtdiRSLRDKEEQWDSSRFQLETKMRESDsdtnKYQLQIASFESERQILTEKIKELDGALRLSDsKVQDMKDDTDKLR 1935
Cdd:COG3096 290 LR----RELFGARRQLAEEQYRLVEMARELE----ELSARESDLEQDYQAASDHLNLVQTALRQQE-KIERYQEDLEELT 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1936 RDLTKAESVENELRKTIDIQSKTSH----EYQLLKDQLLNTQNELNGANNR--------------KQQLENELL---NVR 1994
Cdd:COG3096 361 ERLEEQEEVVEEAAEQLAEAEARLEaaeeEVDSLKSQLADYQQALDVQQTRaiqyqqavqalekaRALCGLPDLtpeNAE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1995 SEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETD--LRQQLETAKNEKRVATK------E 2066
Cdd:COG3096 441 DYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQAWqtARELLRRYRSQQALAQRlqqlraQ 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2067 LEDLKRRLAQLENERRNSSQLSDGWKKEkitlLKKIELLENEKRRTDAAIRE-TALQREAIEKsLNAMERENKELyknca 2145
Cdd:COG3096 521 LAELEQRLRQQQNAERLLEEFCQRIGQQ----LDAAEELEELLAELEAQLEElEEQAAEAVEQ-RSELRQQLEQL----- 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2146 qlqqqiaqlemenGNRILELTNKQ---REEQERqLIRMRQEKGQI----EKVIENRERTHRN--RIKQLEDQIAILRDQL 2216
Cdd:COG3096 591 -------------RARIKELAARApawLAAQDA-LERLREQSGEAladsQEVTAAMQQLLERerEATVERDELAARKQAL 656
|
.
gi 1767287505 2217 D 2217
Cdd:COG3096 657 E 657
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
1726-1970 |
2.91e-04 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 45.84 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1726 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEE----ERRALESRLQSA 1801
Cdd:pfam05622 211 FEYKKLEEKLEALQKEKERLIIERDTLRETNEELRCAQLQQAELSQADALLSPSSDPGDNLAAEimpaEIREKLIRLQHE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1802 KTLLR-SQEEALKQRDEERRQMkskMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLET 1880
Cdd:pfam05622 291 NKMLRlGQEGSYRERLTELQQL---LEDANRRKNELETQNRLANQRILELQQQVEELQKALQEQGSKAEDSSLLKQKLEE 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1881 ---KMRESDSDTNKYQLQIASFESERQI-LTEKIKELDGALRLSDskvQDMKDDTDKLRRDLTKAESVenelRKTID--I 1954
Cdd:pfam05622 368 hleKLHEAQSELQKKKEQIEELEPKQDSnLAQKIDELQEALRKKD---EDMKAMEERYKKYVEKAKSV----IKTLDpkQ 440
|
250
....*....|....*.
gi 1767287505 1955 QSKTSHEYQLLKDQLL 1970
Cdd:pfam05622 441 NPASPPEIQALKNQLL 456
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1160-1463 |
2.93e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.16 E-value: 2.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1160 ERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAaeidklksdisalhdkhLSDLDDEKEQYgkaVENLks 1239
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNG-----------------LVDLSEEAKLL---LQQL-- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1240 veDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLygqnqkikdewddfrnDADKEIQkwktdaytvrseakale 1319
Cdd:COG3206 222 --SELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL----------------LQSPVIQ----------------- 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1320 ttntALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAD-TKGNLVQKEMDLESTQNRLRSLEDQHSTLQSD 1398
Cdd:COG3206 267 ----QLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQeAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1399 ANKwrgeldaalrendilksnNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFR 1463
Cdd:COG3206 343 LAE------------------LPELEAELRRLEREVEVARELYESLLQRLEEARLAEALTVGNVR 389
|
|
| Tropomyosin |
pfam00261 |
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 ... |
511-771 |
2.96e-04 |
|
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organization and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterized by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Pssm-ID: 459736 [Multi-domain] Cd Length: 235 Bit Score: 44.63 E-value: 2.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 511 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEknvdgtvsikrtrslspgkt 590
Cdd:pfam00261 18 KEAMKKLEEAEKRAEKAEAEVAALNRRIQLLEEELERTEERLAEALEKLEEAEKAADESE-------------------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 591 plppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFEnadEARRRLdkqfadakreisnlqksvDEAERNSRR 670
Cdd:pfam00261 78 -----RGRKVLENRALKDEEKMEILEAQLKEAKEIAEEADRKYE---EVARKL------------------VVVEGDLER 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 671 TDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSStddarKLRDEMDEHTNSIQEEFK---TRIDELNRRVENLLREN 747
Cdd:pfam00261 132 AEERAELAESKIVELEEELKVVGNNLKSLEASEEKAS-----EREDKYEEQIRFLTEKLKeaeTRAEFAERSVQKLEKEV 206
|
250 260
....*....|....*....|....
gi 1767287505 748 NRLKSEVNPLKDKYRDLENEYNST 771
Cdd:pfam00261 207 DRLEDELEAEKEKYKAISEELDQT 230
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
788-1210 |
3.14e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 3.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 788 IRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLEteikgRQ 867
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE-----KL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 868 DLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKghqgKITHLENELHSRSGEI-EKLNDLNQRLQKEKQDI 946
Cdd:COG4717 122 EKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEE----ELEELEAELAELQEELeELLEQLSLATEEELQDL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 947 LNQKLKLDGDVQALKETIRKLENELEKLRNENKELvgKEARARDAANQQLSRANLL------------------------ 1002
Cdd:COG4717 198 AEELEELQQRLAELEEELEEAQEELEELEEELEQL--ENELEAAALEERLKEARLLlliaaallallglggsllslilti 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1003 --------------------NKELEDTKQDLKHSTDVNKQLEQdiRDLKERLANIGKGGRISRDSTTGtdggAFGDRSSV 1062
Cdd:COG4717 276 agvlflvlgllallflllarEKASLGKEAEELQALPALEELEE--EELEELLAALGLPPDLSPEELLE----LLDRIEEL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1063 ADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIH-GRDGRDGRDAGNRgthtITNTKERIERIEKNILD--RYH 1139
Cdd:COG4717 350 QELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAaLEQAEEYQELKEE----LEELEEQLEELLGELEEllEAL 425
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 1140 DDELVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGrgndkTENDITELKRKHAAEIDKLKS 1210
Cdd:COG4717 426 DEEELEEELEEL----EEELEELEEELEELREELAELEAELEQLE-----EDGELAELLQELEELKAELRE 487
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
689-950 |
3.16e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.78 E-value: 3.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 689 RKFLEDELA-KLQASFQKSSTDDARKLRDE---MDEHTNSIQEEFKTRIDELNRrvenlLRENNrlKSEVNPLKDKYRDL 764
Cdd:PHA02562 153 RKLVEDLLDiSVLSEMDKLNKDKIRELNQQiqtLDMKIDHIQQQIKTYNKNIEE-----QRKKN--GENIARKQNKYDEL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 765 ENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAE---------QQLKEik 835
Cdd:PHA02562 226 VEEAKTIKAEIEELTDELL-------NLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEkggvcptctQQISE-- 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 836 iQRDDYQKQKDEharhLFDIRHKLETEIKGRQDLEKNgarnNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKI 915
Cdd:PHA02562 297 -GPDRITKIKDK----LKELQHSLEKLDTAIDELEEI----MDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAI 367
|
250 260 270
....*....|....*....|....*....|....*
gi 1767287505 916 THLENELHSRSGEIEKLNDLNQRLQKEKQDILNQK 950
Cdd:PHA02562 368 EELQAEFVDNAEELAKLQDELDKIVKTKSELVKEK 402
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
508-1030 |
3.25e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.12 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 508 ELHKELMTKYEESIER----NIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKnvdgtvSIKRTR 583
Cdd:TIGR00618 187 AKKKSLHGKAELLTLRsqllTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEE------QLKKQQ 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 584 SLSPGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESqVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDE 663
Cdd:TIGR00618 261 LLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKA-VTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSS 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 664 AERNSRRTDDKLRASEAERVAAEKARKFLEdelaklQASFQKSSTDDARKLRD--EMDEHTNSIQEEFKTRIDELNRRVE 741
Cdd:TIGR00618 340 IEEQRRLLQTLHSQEIHIRDAHEVATSIRE------ISCQQHTLTQHIHTLQQqkTTLTQKLQSLCKELDILQREQATID 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 742 NLLRENNRLKSEVNPLKdKYRDLENEYNSTQRRIEEKETQI-----------RYSDDIRRNIQKDLDDLREKYDRVHTDN 810
Cdd:TIGR00618 414 TRTSAFRDLQGQLAHAK-KQQELQQRYAELCAAAITCTAQCeklekihlqesAQSLKEREQQLQTKEQIHLQETRKKAVV 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 811 EKILGELEHAQKA-------AHLAEQQLKEIKIQRDDYQKQKDEHARH---LFDIRHKLETEIKGRQDLEKNGARNNDEL 880
Cdd:TIGR00618 493 LARLLELQEEPCPlcgscihPNPARQDIDNPGPLTRRMQRGEQTYAQLetsEEDVYHQLTSERKQRASLKEQMQEIQQSF 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 881 DKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSrsgEIEKLNDlnqrlQKEKQDILNQKLKLDGDVQAL 960
Cdd:TIGR00618 573 SILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHA---LLRKLQP-----EQDLQDVRLHLQQCSQELALK 644
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 961 KETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNK--ELEDTKQDLKHSTDVNKQLEQDIRDL 1030
Cdd:TIGR00618 645 LTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEkeQLTYWKEMLAQCQTLLRELETHIEEY 716
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
830-1038 |
3.41e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 45.66 E-value: 3.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 830 QLKEIKIQRDDYQKQKDEHARHLFDIRHK-LETEIkgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTI 908
Cdd:pfam07888 48 QAQEAANRQREKEKERYKRDREQWERQRReLESRV---AELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQR 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 909 KGHQGKITHLENELHS-------RSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKEL 981
Cdd:pfam07888 125 AAHEARIRELEEDIKTltqrvleRETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQR 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 982 VGKEARARDAAN---QQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIG 1038
Cdd:pfam07888 205 DTQVLQLQDTITtltQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMA 264
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1172-1386 |
3.96e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1172 RIRELEDELSQIgrgndktENDITELKRkhaaEIDKLKSDISALHDKhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNL 1251
Cdd:COG4942 21 AAAEAEAELEQL-------QQEIAELEK----ELAALKKEEKALLKQ-LAALERRIAALARRIRALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1252 EKQLADSlnrENELEREKRDYDEKINSLY--GQNQKIK-----DEWDDFR---------NDADKE-IQKWKTDAYTVRSE 1314
Cdd:COG4942 89 EKEIAEL---RAELEAQKEELAELLRALYrlGRQPPLAlllspEDFLDAVrrlqylkylAPARREqAEELRADLAELAAL 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 1315 AKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADtkgnLVQKEMDLESTQNRLR 1386
Cdd:COG4942 166 RAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE----LQQEAEELEALIARLE 233
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1998-2217 |
4.15e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 4.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1998 RDYKQRVHDVNNRVSELQRQLQDANTEKNRV-------EDRFLSvEKVVNTMRTT--ETDLRQQLETAKNEKRVATKELE 2068
Cdd:COG3206 107 EDPLGEEASREAAIERLRKNLTVEPVKGSNVieisytsPDPELA-AAVANALAEAylEQNLELRREEARKALEFLEEQLP 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2069 DLKRRLAQLENER---RNSSQLSDGwKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCA 2145
Cdd:COG3206 186 ELRKELEEAEAALeefRQKNGLVDL-SEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPV 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2146 QLQQQIAQLEMENgnRILELTNK----------QREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQ 2215
Cdd:COG3206 265 IQQLRAQLAELEA--ELAELSARytpnhpdviaLRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
..
gi 1767287505 2216 LD 2217
Cdd:COG3206 343 LA 344
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1177-2203 |
4.17e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.94 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1177 EDELSQIGRGNDKTENDITELKRKHAaeidKLKSDISALHDKhlsdLDDEKEQYGKAVE---NLKSVEDDLRDKLNNLEK 1253
Cdd:pfam01576 11 EEELQKVKERQQKAESELKELEKKHQ----QLCEEKNALQEQ----LQAETELCAEAEEmraRLAARKQELEEILHELES 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1254 QLADSLNRENELEREKRDYDEKINSLYGQnqkiKDEWDDFRNDAdkEIQKWKTDAYTVRSEAK--ALETTNTALKAQLQA 1331
Cdd:pfam01576 83 RLEEEEERSQQLQNEKKKMQQHIQDLEEQ----LDEEEAARQKL--QLEKVTTEAKIKKLEEDilLLEDQNSKLSKERKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1332 ANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDAnkwrGELDAALR 1411
Cdd:pfam01576 157 LEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQI----AELQAQIA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1412 EndiLKSNNTNMETDLTRLKNRLK-------SAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQlasqfdtKLT 1484
Cdd:pfam01576 233 E---LRAQLAKKEEELQAALARLEeetaqknNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGE-------ELE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1485 KLRNELQDTNDKLITSD---TERNALRNELQK-LSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEAR 1560
Cdd:pfam01576 303 ALKTELEDTLDTTAAQQelrSKREQEVTELKKaLEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQAL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1561 KYEINDLTSRLDSTEQRLATLQQDYIKADSERDIL----SDALRRFQSSANRVINFHTFVDGGAGYVDGVPGGTSVIGGG 1636
Cdd:pfam01576 383 ESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELqarlSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKD 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1637 PSAQRSGAYDPSSGGVIGSGISGGPGGSDfgREIEIGRG-------DSDQSDVAYPRSVPFPPSADFSSGRPGAASAGgr 1709
Cdd:pfam01576 463 VSSLESQLQDTQELLQEETRQKLNLSTRL--RQLEDERNslqeqleEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAG-- 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1710 vinNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQD--- 1786
Cdd:pfam01576 539 ---TLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEeka 615
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1787 -----AEEERRA-LESRLQSAK--TLLRSQEEALKQRDEERRQMKskMVAAELQA-------------------RGKEAQ 1839
Cdd:pfam01576 616 isaryAEERDRAeAEAREKETRalSLARALEEALEAKEELERTNK--QLRAEMEDlvsskddvgknvhelerskRALEQQ 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1840 LRHLNEQLKNLRTDLDNAHTDI---------------RSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQ 1904
Cdd:pfam01576 694 VEEMKTQLEELEDELQATEDAKlrlevnmqalkaqfeRDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKK 773
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1905 ILTEKIKEL----DGALRLSDSKVQDMKD---DTDKLRRDLTKAESVenelRKTIDIQSKTSH-EYQLLKDQLLNTQNEL 1976
Cdd:pfam01576 774 KLELDLKELeaqiDAANKGREEAVKQLKKlqaQMKDLQRELEEARAS----RDEILAQSKESEkKLKNLEAELLQLQEDL 849
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1977 NGANNRKQQLENELLNVRSEV----------RDYKQRVHDvnnRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTE 2046
Cdd:pfam01576 850 AASERARRQAQQERDELADEIasgasgksalQDEKRRLEA---RIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTEL 926
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2047 TDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKkiELLENEK----------RRTDAAI 2116
Cdd:pfam01576 927 AAERSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLE--EQLEQESrerqaanklvRRTEKKL 1004
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2117 RETALQREAiekslnamERENKELYKncaqlqqqiaqlemengnrileltnkqrEEQERQLIRMRQEKGQIEKVIENRER 2196
Cdd:pfam01576 1005 KEVLLQVED--------ERRHADQYK----------------------------DQAEKGNSRMKQLKRQLEEAEEEASR 1048
|
....*..
gi 1767287505 2197 THRNRIK 2203
Cdd:pfam01576 1049 ANAARRK 1055
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1728-2133 |
4.25e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 45.67 E-value: 4.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1728 IANLEGTLQsLLNKIEKLEMERNELRDTlarmkkkttethttinqketryrniednLQDAEEERRALESRLQSAKtllrs 1807
Cdd:PRK11281 62 QQDLEQTLA-LLDKIDRQKEETEQLKQQ----------------------------LAQAPAKLRQAQAELEALK----- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1808 qeealKQRDEERRQMKSKMVAAELQARgkeaqLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRE--- 1884
Cdd:PRK11281 108 -----DDNDEETRETLSTLSLRQLESR-----LAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQirn 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1885 --SDSDTNKYQL---QIASFESERQILTEKI----KELDGALRLSdskvqdmkdDTDKLRRDLTKAEsvenelrktidiQ 1955
Cdd:PRK11281 178 llKGGKVGGKALrpsQRVLLQAEQALLNAQNdlqrKSLEGNTQLQ---------DLLQKQRDYLTAR------------I 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1956 SKTSHEYQLLKDqLLNTQNeLNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSE-LQRQLQDAN--TEKNrvedrf 2032
Cdd:PRK11281 237 QRLEHQLQLLQE-AINSKR-LTLSEKTVQEAQSQDEAARIQANPLVAQELEINLQLSQrLLKATEKLNtlTQQN------ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2033 LSVEKVVNTMRTTETDL--------------------RQQLETAKNEKRVAtKELEDLkrRLAQLE-NERRNssQLSDGw 2091
Cdd:PRK11281 309 LRVKNWLDRLTQSERNIkeqisvlkgslllsrilyqqQQALPSADLIEGLA-DRIADL--RLEQFEiNQQRD--ALFQP- 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2092 kKEKITllkkiELLENEKRRTDAAIRETALQ-----REAIE---KSLNAM 2133
Cdd:PRK11281 383 -DAYID-----KLEAGHKSEVTDEVRDALLQllderRELLDqlnKQLNNQ 426
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1734-2140 |
4.46e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.81 E-value: 4.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1734 TLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERraleSRLQSAKTLLRSQEEALK 1813
Cdd:TIGR00606 204 EHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNL----SKIMKLDNEIKALKSRKK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1814 QRDEERRQMKSKMVAAelqARGKEAQLRHLNE----QLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDT 1889
Cdd:TIGR00606 280 QMEKDNSELELKMEKV---FQGTDEQLNDLYHnhqrTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQA 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1890 NKYQLQIASFESERQILTEKIkELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQL 1969
Cdd:TIGR00606 357 DRHQEHIRARDSLIQSLATRL-ELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEK 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1970 LNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQD-------ANTEKNRVEDRFLSVEKVvnTM 2042
Cdd:TIGR00606 436 KGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERElskaeknSLTETLKKEVKSLQNEKA--DL 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2043 RTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSD------GWKKEKITLLKKIELLENEKRRTDAAI 2116
Cdd:TIGR00606 514 DRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDeltsllGYFPNKKQLEDWLHSKSKEINQTRDRL 593
|
410 420
....*....|....*....|....
gi 1767287505 2117 RETALQREAIEKSLNAMERENKEL 2140
Cdd:TIGR00606 594 AKLNKELASLEQNKNHINNELESK 617
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
502-1035 |
4.61e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.81 E-value: 4.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 502 SSEGDAELHKELMTKYEESIERNIELESRGDDSQRKIAELEAEL------RRNREKLNEA---------QGALKKLHEMA 566
Cdd:TIGR00606 228 SKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIkalksrKKQMEKDNSElelkmekvfQGTDEQLNDLY 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 567 QD--------SEKNVDGTVSI----KRTRSLSPGKTPLppseALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFE 634
Cdd:TIGR00606 308 HNhqrtvrekERELVDCQRELeklnKERRLLNQEKTEL----LVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 635 NAdearrrldkqfADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVA-AEKARKFLEDELAKLQASFQKSS------ 707
Cdd:TIGR00606 384 RG-----------PFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERlKQEQADEIRDEKKGLGRTIELKKeilekk 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 708 TDDARKLRDEMDEHTNS------IQEEFKTRIDELNRRVENLLRENnrLKSEVNPLKDKYRDLENeynsTQRRIEEKETQ 781
Cdd:TIGR00606 453 QEELKFVIKELQQLEGSsdrileLDQELRKAERELSKAEKNSLTET--LKKEVKSLQNEKADLDR----KLRKLDQEMEQ 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 782 IRYSDDIRRNIQKDLDDLREKYDRVHTDNEK-------ILGELEHAQKAAHLAEQQLKEIKIQRDDYQK-----QKDEHA 849
Cdd:TIGR00606 527 LNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRhsdeltsLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKlnkelASLEQN 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 850 RHLFDIRHKLETE-----------IKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDT------------ 906
Cdd:TIGR00606 607 KNHINNELESKEEqlssyedklfdVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDenqsccpvcqrv 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 907 --TIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILnqklkldGDVQALKETIRKLENELEKLRNENKELVGK 984
Cdd:TIGR00606 687 fqTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEML-------GLAPGRQSIIDLKEKEIPELRNKLQKVNRD 759
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 985 EARARDAANQQLSRANLLNKELEDTKqDLKHSTDVNKQLEQDIRDLKERLA 1035
Cdd:TIGR00606 760 IQRLKNDIEEQETLLGTIMPEEESAK-VCLTDVTIMERFQMELKDVERKIA 809
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
829-1032 |
4.84e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.39 E-value: 4.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 829 QQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIkgrqdlekngARNNDELDKLRQTISDYESQINLLrrhNDEldtti 908
Cdd:PHA02562 181 QQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENI----------ARKQNKYDELVEEAKTIKAEIEEL---TDE----- 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 909 kghqgkITHLENELHSRSGEIEKLNDLNQRLqKEKQDILNQKLKL--DGDV-QALKETIRKLENELEKLRNENKEL---- 981
Cdd:PHA02562 243 ------LLNLVMDIEDPSAALNKLNTAAAKI-KSKIEQFQKVIKMyeKGGVcPTCTQQISEGPDRITKIKDKLKELqhsl 315
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 982 ------VGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 1032
Cdd:PHA02562 316 ekldtaIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQA 372
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
806-1037 |
4.92e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 45.30 E-value: 4.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 806 VHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKdeharhlfdIRHKLETEIKgRQDLEKNGARNNDELDKLRQ 885
Cdd:PRK05771 31 VHIEDLKEELSNERLRKLRSLLTKLSEALDKLRSYLPKLN---------PLREEKKKVS-VKSLEELIKDVEEELEKIEK 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 886 TISDYESQINllrrhndELDTTIKGHQGKITHLE----------NELHSRS-----GEIEKLNDLNQRLQKEKQDILNQK 950
Cdd:PRK05771 101 EIKELEEEIS-------ELENEIKELEQEIERLEpwgnfdldlsLLLGFKYvsvfvGTVPEDKLEELKLESDVENVEYIS 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 951 LKLDGD---VQALKETIRKLENELEKLRNENKELVGKEaRARDAANQQLSRANLLNKELEDTKQDLKhstDVNKQLEQDI 1027
Cdd:PRK05771 174 TDKGYVyvvVVVLKELSDEVEEELKKLGFERLELEEEG-TPSELIREIKEELEEIEKERESLLEELK---ELAKKYLEEL 249
|
250
....*....|
gi 1767287505 1028 RDLKERLANI 1037
Cdd:PRK05771 250 LALYEYLEIE 259
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1787-2109 |
5.05e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.52 E-value: 5.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1787 AEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRD 1866
Cdd:PTZ00121 1572 AEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE 1651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1867 KEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGAlrlsdSKVQDMKDDTDKLRRdltKAESV-- 1944
Cdd:PTZ00121 1652 LKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEA-----KKAEELKKKEAEEKK---KAEELkk 1723
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1945 ENELRKTIDIQSKTSHEYQLLKDQLLNTQnelNGANNRKQQLENELLNVRSEVRDYKQRV------HDVNNRVSELQRQL 2018
Cdd:PTZ00121 1724 AEEENKIKAEEAKKEAEEDKKKAEEAKKD---EEEKKKIAHLKKEEEKKAEEIRKEKEAVieeeldEEDEKRRMEVDKKI 1800
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2019 QDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDgwkKEKITL 2098
Cdd:PTZ00121 1801 KDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFN---KEKDLK 1877
|
330
....*....|.
gi 1767287505 2099 LKKIELLENEK 2109
Cdd:PTZ00121 1878 EDDEEEIEEAD 1888
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
652-1337 |
5.51e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.48 E-value: 5.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 652 REISNLQKSVDEAERNSRRTDDKLRASEAErvaAEKARKFLEDELAKLQaSFQKSSTDDARKLRDEMDEHTNSIQEEFKT 731
Cdd:pfam05483 78 RLYSKLYKEAEKIKKWKVSIEAELKQKENK---LQENRKIIEAQRKAIQ-ELQFENEKVSLKLEEEIQENKDLIKENNAT 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 732 R--IDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSD-DIRRNIQKD---LDDLREKYDR 805
Cdd:pfam05483 154 RhlCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARlEMHFKLKEDhekIQHLEEEYKK 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 806 VHTDNEKILG-------ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNND 878
Cdd:pfam05483 234 EINDKEKQVSllliqitEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQK 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 879 ELDK--------LRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLND----LNQRLQKEKQDi 946
Cdd:pfam05483 314 ALEEdlqiatktICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDqlkiITMELQKKSSE- 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 947 LNQKLKLDGDVQALKETIRKLENELEKLRNENKElVGKEARARDAANQQLS-RANLLNKELEDTKQDLKHSTDVNKQLEQ 1025
Cdd:pfam05483 393 LEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQ-FEKIAEELKGKEQELIfLLQAREKEIHDLEIQLTAIKTSEEHYLK 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1026 DIRDLKERLANigkggrisrDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDiesrgggeidipssgdvihgrd 1105
Cdd:pfam05483 472 EVEDLKTELEK---------EKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQE---------------------- 520
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1106 grdgrdagnrgthTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGR 1185
Cdd:pfam05483 521 -------------DIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEK 587
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1186 GNDKTENDITELKRK---HAAEIDKLKSDISALHDKHLSD---LDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADS- 1258
Cdd:pfam05483 588 QMKILENKCNNLKKQienKNKNIEELHQENKALKKKGSAEnkqLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKk 667
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1259 LNREN---ELEREKRDYDE--------------KINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETT 1321
Cdd:pfam05483 668 ISEEKlleEVEKAKAIADEavklqkeidkrcqhKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIE 747
|
730
....*....|....*.
gi 1767287505 1322 NTALKAQLQAANDRID 1337
Cdd:pfam05483 748 LSNIKAELLSLKKQLE 763
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1158-1303 |
5.58e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.76 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1158 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA---AEIDKLKSDISALHDKhlsdLDDEKEQYG--- 1231
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEdleKEIKRLELEIEEVEAR----IKKYEEQLGnvr 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 1232 --KAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQK 1303
Cdd:COG1579 87 nnKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEE 160
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
711-1032 |
6.15e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 44.89 E-value: 6.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 711 ARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLEN-------EYNSTQRRIEEKETQIR 783
Cdd:pfam07888 53 ANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSAsseelseEKDALLAQRAAHEARIR 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 784 -YSDDIRRNIQK------DLDDLREKYDRVH-------TDNEKILGELEHAQKAAHLAEQQLKEIKiqrdDYQKQKDEHA 849
Cdd:pfam07888 133 eLEEDIKTLTQRvleretELERMKERAKKAGaqrkeeeAERKQLQAKLQQTEEELRSLSKEFQELR----NSLAQRDTQV 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 850 RHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRhndELDTTIkghqGKITHLENELHSRSGEI 929
Cdd:pfam07888 209 LQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGE---ELSSMA----AQRDRTQAELHQARLQA 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 930 EKLN----DLNQRL-------QKEKQDiLNQKLKLDGD-VQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLS 997
Cdd:pfam07888 282 AQLTlqlaDASLALregrarwAQERET-LQQSAEADKDrIEKLSAELQRLEERLQEERMEREKLEVELGREKDCNRVQLS 360
|
330 340 350
....*....|....*....|....*....|....*
gi 1767287505 998 RAnllNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 1032
Cdd:pfam07888 361 ES---RRELQELKASLRVAQKEKEQLQAEKQELLE 392
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1944-2213 |
6.17e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.51 E-value: 6.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1944 VENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANT 2023
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2024 EKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITllKKIE 2103
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAE--QALD 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2104 LLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQE 2183
Cdd:COG4372 187 ELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELA 266
|
250 260 270
....*....|....*....|....*....|
gi 1767287505 2184 KGQIEKVIENRERTHRNRIKQLEDQIAILR 2213
Cdd:COG4372 267 ILVEKDTEEEELEIAALELEALEEAALELK 296
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1786-2136 |
6.32e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.33 E-value: 6.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1786 DAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMvaAELQARGKEAQL---RHLNEQLKNLRTDLDNAHTDIR 1862
Cdd:COG3096 833 DPEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQL--QLLNKLLPQANLladETLADRLEELREELDAAQEAQA 910
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1863 SLRDKEEQWDssrfQLETKMRESDSDTNKY-QLQIASFE--SERQILTEKIKELD------GALRLSDS-----KVQDMk 1928
Cdd:COG3096 911 FIQQHGKALA----QLEPLVAVLQSDPEQFeQLQADYLQakEQQRRLKQQIFALSevvqrrPHFSYEDAvgllgENSDL- 985
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1929 ddTDKLRRDLTKAESVENELRKTI-DIQSKTSHEYQLLKDqllntqneLNGANNRKQQLENELLN--------------- 1992
Cdd:COG3096 986 --NEKLRARLEQAEEARREAREQLrQAQAQYSQYNQVLAS--------LKSSRDAKQQTLQELEQeleelgvqadaeaee 1055
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1993 -VRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVntmrtteTDLRQQLETAKN------------- 2058
Cdd:COG3096 1056 rARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDY-------KQEREQVVQAKAgwcavlrlardnd 1128
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2059 -EKRVATKEL-----EDLKR---------RLAQLENER-RNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQ 2122
Cdd:COG3096 1129 vERRLHRRELaylsaDELRSmsdkalgalRLAVADNEHlRDALRLSEDPRRPERKVQFYIAVYQHLRERIRQDIIRTDDP 1208
|
410
....*....|....
gi 1767287505 2123 REAIEKslnaMERE 2136
Cdd:COG3096 1209 VEAIEQ----MEIE 1218
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
711-1010 |
6.99e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 44.84 E-value: 6.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 711 ARKLRDEMDEHTNSIQEEfktrIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNsTQR-----RIEEKETQIRY- 784
Cdd:pfam06160 84 AKKALDEIEELLDDIEED----IKQILEELDELLESEEKNREEVEELKDKYRELRKTLL-ANRfsygpAIDELEKQLAEi 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 785 ------------------SDDIRRNIQKDLDDLREKYDRV------------------------------HTDNEKILGE 816
Cdd:pfam06160 159 eeefsqfeeltesgdyleAREVLEKLEEETDALEELMEDIpplyeelktelpdqleelkegyremeeegyALEHLNVDKE 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 817 LEHAQKAAHLAEQQLKEIKIQR-----DDYQKQKDeharHLFDIrhkLETEIKGRQDLEKNGARNNDELDKLRQTisdye 891
Cdd:pfam06160 239 IQQLEEQLEENLALLENLELDEaeealEEIEERID----QLYDL---LEKEVDAKKYVEKNLPEIEDYLEHAEEQ----- 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 892 sqinllrrhNDELDTtikghqgKITHL-------ENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---KLDGDVQALK 961
Cdd:pfam06160 307 ---------NKELKE-------ELERVqqsytlnENELERVRGLEKQLEELEKRYDEIVERLEEKEVaysELQEELEEIL 370
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1767287505 962 ETIRKLENELEKLRNENKELVGKEARARDAANQqlsranlLNKELEDTK 1010
Cdd:pfam06160 371 EQLEEIEEEQEEFKESLQSLRKDELEAREKLDE-------FKLELREIK 412
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1117-1376 |
7.16e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.62 E-value: 7.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1117 THTITNTKERIERIEKNILDryhddelVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITE 1196
Cdd:PHA02562 187 DMKIDHIQQQIKTYNKNIEE-------QRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNK 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1197 LKRKHA---AEIDKLKSDISALHDKH-----LSDLDDEKEQYGKavenlksveddLRDKLNNLEKQLADSLNRENELERE 1268
Cdd:PHA02562 260 LNTAAAkikSKIEQFQKVIKMYEKGGvcptcTQQISEGPDRITK-----------IKDKLKELQHSLEKLDTAIDELEEI 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1269 KRDYDEKINSLYGQNQKIKDEwddfrndadkeiqkwKTDAYTVRSEAKALEttntalkaqlqaanDRIDHLTKTVNDHTS 1348
Cdd:PHA02562 329 MDEFNEQSKKLLELKNKISTN---------------KQSLITLVDKAKKVK--------------AAIEELQAEFVDNAE 379
|
250 260
....*....|....*....|....*...
gi 1767287505 1349 KVrdltSQVRHLEDELADTKGNLVQKEM 1376
Cdd:PHA02562 380 EL----AKLQDELDKIVKTKSELVKEKY 403
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1878-2226 |
7.40e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.89 E-value: 7.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1878 LETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMK----------DDTDKLRRDLTKAES-VEN 1946
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKsalnelssleDMKNRYESEIKTAESdLSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1947 ELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENE---LLNVRSEVRDYkqrvHDVNNRVSELQRQLQDANT 2023
Cdd:PRK01156 268 ELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKkqiLSNIDAEINKY----HAIIKKLSVLQKDYNDYIK 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2024 EKNRVEDrflsVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIE 2103
Cdd:PRK01156 344 KKSRYDD----LNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQ 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2104 LLENEKRRTDAAIRETALQREAIEKSLNAMERENK---------ELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQE 2174
Cdd:PRK01156 420 DISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVcpvcgttlgEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKI 499
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 2175 RQLIRM--RQEKGQIEKVI--ENRERTHRNRIKQLEDQIAILRDQLDGERRRRREY 2226
Cdd:PRK01156 500 VDLKKRkeYLESEEINKSIneYNKIESARADLEDIKIKINELKDKHDKYEEIKNRY 555
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1120-1528 |
7.99e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.89 E-value: 7.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1120 ITNTKERIERIEKNIlDRYHDDelveHKIREVNDRWKRELERLENEKDDLERRIRELEDE-------LSQIGRGNDKTEN 1192
Cdd:PRK01156 307 IENKKQILSNIDAEI-NKYHAI----IKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYemdynsyLKSIESLKKKIEE 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1193 DITELKRKHA--AEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNR--------- 1261
Cdd:PRK01156 382 YSKNIERMSAfiSEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgtt 461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1262 --ENELEREKRDYDEKINSLygqNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHL 1339
Cdd:PRK01156 462 lgEEKSNHIINHYNEKKSRL---EEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKI 538
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1340 TKTVNDHTsKVRDLTSQVRHLEDELADTK------GNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGEL--DAALR 1411
Cdd:PRK01156 539 NELKDKHD-KYEEIKNRYKSLKLEDLDSKrtswlnALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFpdDKSYI 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1412 ENDILKsnntnMETDLTRLKNRLKSAED---ALKELKNSLSHAKTEKERLQnafrEKTKQADHLNQLASQFDTKLTKLRN 1488
Cdd:PRK01156 618 DKSIRE-----IENEANNLNNKYNEIQEnkiLIEKLRGKIDNYKKQIAEID----SIIPDLKEITSRINDIEDNLKKSRK 688
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1767287505 1489 ELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRK 1528
Cdd:PRK01156 689 ALDDAKANRARLESTIEILRTRINELSDRINDINETLESM 728
|
|
| Tht1 |
pfam04163 |
Tht1-like nuclear fusion protein; |
1219-1478 |
8.66e-04 |
|
Tht1-like nuclear fusion protein;
Pssm-ID: 282073 Cd Length: 595 Bit Score: 44.43 E-value: 8.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1219 HLSDLDDEKEQYGKAVENL----KSVEDDLRDKLNNLEKQLA-DSLNRENELEREKRDYDEKINSLYGQNQKI-KDEWDD 1292
Cdd:pfam04163 153 REALLEFEKELIIELFLNItelqDQFGDDLDMKILHLMFQMEqDFENFLDDLAQMFDKFDGEFNNATESNRIIiENDFKD 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1293 FRNDADKEIQKWktdaytvrSEAKALETTNTALKAQLQAANDRIdhltktvndhTSKVRDLTSQVRHLEDELADTKGNLV 1372
Cdd:pfam04163 233 FNFKVNDEIMGL--------VELENHEQEGMVLEKEIIEKIKQL----------KNEIDDIHHFFADFADELAGYKNDII 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1373 QKEMDLESTQnrlrsledQHSTLQSDANKWRGELDAALRENdilksnntnmetdltrLKNRLKSAEDALKE-LKNSLSHA 1451
Cdd:pfam04163 295 EKINDLKDDS--------ENAIALSAIGKYTSEFSAFMEKN----------------IKDLIEMSEDSLKEsVQRNIDFV 350
|
250 260
....*....|....*....|....*..
gi 1767287505 1452 KTEKERLQNAFREKTKQADHLNQLASQ 1478
Cdd:pfam04163 351 NSGFQELEDFSIGLKEELGGLKKDLSE 377
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1156-2136 |
8.76e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.78 E-value: 8.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1156 KRELERLENekdDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEID---KL---KSDISALHDKHLSDLDDEKEQ 1229
Cdd:pfam01576 70 KQELEEILH---ELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAarqKLqleKVTTEAKIKKLEEDILLLEDQ 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1230 YGKAVENLKSVEddlrDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYG---QNQKIKDEWDDFRNDADKEIQKWKT 1306
Cdd:pfam01576 147 NSKLSKERKLLE----ERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEErlkKEEKGRQELEKAKRKLEGESTDLQE 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1307 DAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDeladtkgnlvqkemDLESTQNRLR 1386
Cdd:pfam01576 223 QIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQE--------------DLESERAARN 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1387 SLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRL----KSAEDALKELKNSLSHAKTE-KERLQNA 1461
Cdd:pfam01576 289 KAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALeeetRSHEAQLQEMRQKHTQALEElTEQLEQA 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1462 FR-----EKTKQA------------DHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQ 1524
Cdd:pfam01576 369 KRnkanlEKAKQAlesenaelqaelRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSL 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1525 IQRKSDEYQTTIDDLAhshrvSEDSRLNALQEL--EARKYEINdLTSRLDSTEQRLATLQQdyiKADSERDILSDALRRF 1602
Cdd:pfam01576 449 LNEAEGKNIKLSKDVS-----SLESQLQDTQELlqEETRQKLN-LSTRLRQLEDERNSLQE---QLEEEEEAKRNVERQL 519
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1603 QSSANRVINFHTFVDGGAGYVDGVPGGTSVIGGGPSA------QRSGAYDPSSGGVIGSGISGGPGGSDFGRE------I 1670
Cdd:pfam01576 520 STLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEAltqqleEKAAAYDKLEKTKNRLQQELDDLLVDLDHQrqlvsnL 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1671 EIGRGDSDQSdVAYPRSVpfppSADFSSGRPGA-ASAGGRVINNLdgtttvnmnggfdiaNLEGTLQSLLNKIEKLEMER 1749
Cdd:pfam01576 600 EKKQKKFDQM-LAEEKAI----SARYAEERDRAeAEAREKETRAL---------------SLARALEEALEAKEELERTN 659
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1750 NELRdtlARMkkkttetHTTINQKEtryrNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAA 1829
Cdd:pfam01576 660 KQLR---AEM-------EDLVSSKD----DVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQAL 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1830 ------ELQARGK--EAQLRHLNEQLKNLRTDLDNAhtdirslRDKEEQWDSSRFQLETKMRESDSDTN----------- 1890
Cdd:pfam01576 726 kaqferDLQARDEqgEEKRRQLVKQVRELEAELEDE-------RKQRAQAVAAKKKLELDLKELEAQIDaankgreeavk 798
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1891 ---KYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAE-----------SVENELRKTIDIQS 1956
Cdd:pfam01576 799 qlkKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASErarrqaqqerdELADEIASGASGKS 878
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1957 KTSHEYQLLKDQLLNTQNELNGANN---------RKQQLENELLNVR-SEVRDYKQRvhdVNNRVSELQRQLQDANTEKN 2026
Cdd:pfam01576 879 ALQDEKRRLEARIAQLEEELEEEQSntellndrlRKSTLQVEQLTTElAAERSTSQK---SESARQQLERQNKELKAKLQ 955
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2027 RVEDRFLSVEKvvNTMRTTETDLRQ---QLETAKNEKRVATKEL----EDLKRRLAQLENERRNSSQLSDGWKKEKI--- 2096
Cdd:pfam01576 956 EMEGTVKSKFK--SSIAALEAKIAQleeQLEQESRERQAANKLVrrteKKLKEVLLQVEDERRHADQYKDQAEKGNSrmk 1033
|
1050 1060 1070 1080
....*....|....*....|....*....|....*....|..
gi 1767287505 2097 TLLKKIELLENEKRRTDAAIREtaLQREAIE--KSLNAMERE 2136
Cdd:pfam01576 1034 QLKRQLEEAEEEASRANAARRK--LQRELDDatESNESMNRE 1073
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1734-2199 |
8.79e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.57 E-value: 8.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1734 TLQSLLNKIEKLEMERNELRDTLARMKKKttethttinqketryrnIEDNLQDAEEERRALESRLQSAKTLLRSQEEALK 1813
Cdd:TIGR00618 404 ILQREQATIDTRTSAFRDLQGQLAHAKKQ-----------------QELQQRYAELCAAAITCTAQCEKLEKIHLQESAQ 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1814 QRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLR-------------TDLDNAHTDIRSLRDKEEQWDSSRFQLET 1880
Cdd:TIGR00618 467 SLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCplcgscihpnparQDIDNPGPLTRRMQRGEQTYAQLETSEED 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1881 KMRESDSDTNKyqlqiasfeseRQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRdltkaesVENELRKTIDIQSKtsh 1960
Cdd:TIGR00618 547 VYHQLTSERKQ-----------RASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQN-------ITVRLQDLTEKLSE--- 605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1961 eyqlLKDQLLntqnELNGANNRKQQLENELLNVRSEVRDYKQRvhdvnnrvselqrqLQDANTEKNRvedrflsvekvvn 2040
Cdd:TIGR00618 606 ----AEDMLA----CEQHALLRKLQPEQDLQDVRLHLQQCSQE--------------LALKLTALHA------------- 650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2041 tmrtTETDLRQQLETAKnEKRVATKELEDLKRRLAQLENERRNSSQLSdGWKKE---KITLLKKIELLENEKRR------ 2111
Cdd:TIGR00618 651 ----LQLTLTQERVREH-ALSIRVLPKELLASRQLALQKMQSEKEQLT-YWKEMlaqCQTLLRELETHIEEYDRefneie 724
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2112 --TDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQliRMRQEKGQIEK 2189
Cdd:TIGR00618 725 naSSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFN--RLREEDTHLLK 802
|
490
....*....|
gi 1767287505 2190 VIENRERTHR 2199
Cdd:TIGR00618 803 TLEAEIGQEI 812
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1739-2101 |
8.87e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 8.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1739 LNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALEsRLQSAKTLLRSQEEALKQRDEE 1818
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE-ELKKAEEENKIKAAEEAKKAEE 1672
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1819 RRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1898
Cdd:PTZ00121 1673 DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKD 1752
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1899 FESERQILTEKIKELDGALRLSDSKVQDMKDDTDKlrRDLTKAESVEnelRKTIDIQSKTSHEYQLLKDQLLNTQNELNG 1978
Cdd:PTZ00121 1753 EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDE--EDEKRRMEVD---KKIKDIFDNFANIIEGGKEGNLVINDSKEM 1827
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1979 ANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDrflSVEKVVNTMRTTETDlRQQLETAKN 2058
Cdd:PTZ00121 1828 EDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKED---DEEEIEEADEIEKID-KDDIEREIP 1903
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1767287505 2059 EKRVATKELEDLKRRLAQLENERRNSSQLsdgwKKEKITLLKK 2101
Cdd:PTZ00121 1904 NNNMAGKNNDIIDDKLDKDEYIKRDAEET----REEIIKISKK 1942
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1259-1604 |
9.44e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 44.35 E-value: 9.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1259 LNRENELEREKRDYDEKINSLYGQNQKIKDewddfrnDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDR--- 1335
Cdd:pfam05557 12 SQLQNEKKQMELEHKRARIELEKKASALKR-------QLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKkky 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1336 IDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQ---SDANKWRGELDAALRE 1412
Cdd:pfam05557 85 LEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKakaSEAEQLRQNLEKQQSS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1413 ndiLKSNNTNMETdltrLKNRLKSAEDALKELKNSlshaKTEKERLQNAFREKTKQADHLNQLASQFDTKLTkLRNELQD 1492
Cdd:pfam05557 165 ---LAEAEQRIKE----LEFEIQSQEQDSEIVKNS----KSELARIPELEKELERLREHNKHLNENIENKLL-LKEEVED 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1493 TNDKLITSDTERNALRN---ELQKLSQELKFGNEQIQRKSDEYQTTID-----------DLAHSHRVS---------EDS 1549
Cdd:pfam05557 233 LKRKLEREEKYREEAATlelEKEKLEQELQSWVKLAQDTGLNLRSPEDlsrrieqlqqrEIVLKEENSsltssarqlEKA 312
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1550 RLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQS 1604
Cdd:pfam05557 313 RRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILESYDK 367
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1124-1253 |
1.01e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.46 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1124 KERIERIEKNILDRYHDDELVEHKIREVNDRwKRELERLENEKDDLERRIRELEDELSqigrgndKTENDITELKRKHAA 1203
Cdd:COG2433 388 KELPEEEPEAEREKEHEERELTEEEEEIRRL-EEQVERLEAEVEELEAELEEKDERIE-------RLERELSEARSEERR 459
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1204 EIDKlksdisalhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEK 1253
Cdd:COG2433 460 EIRK---------DREISRLDREIERLERELEEERERIEELKRKLERLKE 500
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
2063-2215 |
1.02e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2063 ATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKEL-- 2140
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELra 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2141 ----------------YKNCAQLQQQ-----IAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHR 2199
Cdd:COG4942 98 eleaqkeelaellralYRLGRQPPLAlllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170
....*....|....*.
gi 1767287505 2200 NRIKQLEDQIAILRDQ 2215
Cdd:COG4942 178 ALLAELEEERAALEAL 193
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
931-1037 |
1.10e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 43.80 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 931 KLNDLNQRLQKEKQdilnQKLKLDGDVQALKETIRKLENELEKLRNENKELvgkeARARDAANQqlsRANLLNKELEDTK 1010
Cdd:PRK09039 61 QIAELADLLSLERQ----GNQDLQDSVANLRASLSAAEAERSRLQALLAEL----AGAGAAAEG---RAGELAQELDSEK 129
|
90 100 110
....*....|....*....|....*....|.
gi 1767287505 1011 Q----DLKHSTDVNKQLEQdirdLKERLANI 1037
Cdd:PRK09039 130 QvsarALAQVELLNQQIAA----LRRQLAAL 156
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
488-853 |
1.15e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 488 ADLLEELRKIRGGGSSEGDAELhKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLnEAQGALKKLHEMAQ 567
Cdd:COG4717 173 AELQEELEELLEQLSLATEEEL-QDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENEL-EAAALEERLKEARL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 568 DSekNVDGTVSIKRTRSLSPGKTPLPPSEALRAVRNTFRNkdnDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQF 647
Cdd:COG4717 251 LL--LIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLAL---LFLLLAREKASLGKEAEELQALPALEELEEEELEELL 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 648 ADAKREISNLQKSVDEAERNSRRTDDKLRasEAERVAAEKARKFLEDELAKLQASFQKSSTDD----------ARKLRDE 717
Cdd:COG4717 326 AALGLPPDLSPEELLELLDRIEELQELLR--EAEELEEELQLEELEQEIAALLAEAGVEDEEElraaleqaeeYQELKEE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 718 MDEHTNSIQEEFKTRIDELNRRV-ENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDdirrnIQKDL 796
Cdd:COG4717 404 LEELEEQLEELLGELEELLEALDeEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAE-----LLQEL 478
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 797 DDLREKydrvhtdnekiLGELEHAQKAAHLAEQQLKE-IKIQRDDYQKQKDEHARHLF 853
Cdd:COG4717 479 EELKAE-----------LRELAEEWAALKLALELLEEaREEYREERLPPVLERASEYF 525
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1782-2196 |
1.15e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 44.27 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1782 DNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQArgKEAQLRHLNEQLKNLRTDLDNAHTDI 1861
Cdd:TIGR00606 393 KNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIEL--KKEILEKKQEELKFVIKELQQLEGSS 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1862 RSLRDKEEQWDSSRFQLEtkMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA 1941
Cdd:TIGR00606 471 DRILELDQELRKAERELS--KAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKD 548
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1942 ESV-ENELRKTIDIQS----------------KTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRV 2004
Cdd:TIGR00606 549 EQIrKIKSRHSDELTSllgyfpnkkqledwlhSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKL 628
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2005 HDV------NNRVSELQRQLQDANTE------KNRVEDRFL--------SVEKVVNTMRTTETDLRQQLETAKNEKRVAT 2064
Cdd:TIGR00606 629 FDVcgsqdeESDLERLKEEIEKSSKQramlagATAVYSQFItqltdenqSCCPVCQRVFQTEAELQEFISDLQSKLRLAP 708
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2065 KELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNA------------ 2132
Cdd:TIGR00606 709 DKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTimpeeesakvcl 788
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 2133 -----MERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRER 2196
Cdd:TIGR00606 789 tdvtiMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQE 857
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
738-1401 |
1.20e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.44 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 738 RRVENLLRENNRLKSEVNPLKDkyrdLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD-LREKYDRVHTDNEKILGE 816
Cdd:pfam12128 234 AGIMKIRPEFTKLQQEFNTLES----AELRLSHLHFGYKSDETLIASRQEERQETSAELNQlLRTLDDQWKEKRDELNGE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 817 LEHAQKAAHLAEQQLKEIKIQRDDYQKQKDE----HARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISdyES 892
Cdd:pfam12128 310 LSAADAAVAKDRSELEALEDQHGAFLDADIEtaaaDQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIK--EQ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 893 QINLLRRHNDELD----TTIKGH---QGKITHLENEL-HSRSGEIEKLNDLNQRLqkeKQDILNQKLKLDgDVQALKETI 964
Cdd:pfam12128 388 NNRDIAGIKDKLAkireARDRQLavaEDDLQALESELrEQLEAGKLEFNEEEYRL---KSRLGELKLRLN-QATATPELL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 965 RKLEN----------ELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKH--------STDVNKQLEQD 1026
Cdd:pfam12128 464 LQLENfderierareEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDElelqlfpqAGTLLHFLRKE 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1027 IRDLKErlaNIGKggRISRDSTTGTDGGAFGDRSSVADPSRTRGaagstvfvpAAEDIEsrgggEIDIPSSGDviHGRDG 1106
Cdd:pfam12128 544 APDWEQ---SIGK--VISPELLHRTDLDPEVWDGSVGGELNLYG---------VKLDLK-----RIDVPEWAA--SEEEL 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1107 RDGRDAGNRgthTITNTKERIERIEKnildryhddELVEhkIREVNDRWKRELER----LENEKDDLERRIRELEDELSQ 1182
Cdd:pfam12128 603 RERLDKAEE---ALQSAREKQAAAEE---------QLVQ--ANGELEKASREETFartaLKNARLDLRRLFDEKQSEKDK 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1183 IGRGNDKTENDITELKRKHAAEIDKLKSDISAL---HDKHLSDLDDEKEQYGKAVENLKSVEDDLRD------------K 1247
Cdd:pfam12128 669 KNKALAERKDSANERLNSLEAQLKQLDKKHQAWleeQKEQKREARTEKQAYWQVVEGALDAQLALLKaaiaarrsgakaE 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1248 LNNLEKQLADSL-------NRENELEREKRDYDEKINSLYGQNQKIKdEWDDFRNDA-DKEIQKWKTDAYTVRSEAKALE 1319
Cdd:pfam12128 749 LKALETWYKRDLaslgvdpDVIAKLKREIRTLERKIERIAVRRQEVL-RYFDWYQETwLQRRPRLATQLSNIERAISELQ 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1320 TTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTK--GNLVQKEMDLESTQNRLRSLEDQHSTLQS 1397
Cdd:pfam12128 828 QQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATLKedANSEQAQGSIGERLAQLEDLKLKRDYLSE 907
|
....
gi 1767287505 1398 DANK 1401
Cdd:pfam12128 908 SVKK 911
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1743-2080 |
1.22e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.74 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1743 EKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQM 1822
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1823 KSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESE 1902
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1903 RQILTE-----KIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELN 1977
Cdd:COG4372 166 LAALEQelqalSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1978 GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAK 2057
Cdd:COG4372 246 EDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELA 325
|
330 340
....*....|....*....|...
gi 1767287505 2058 NEKRVATKELEDLKRRLAQLENE 2080
Cdd:COG4372 326 KKLELALAILLAELADLLQLLLV 348
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1731-2217 |
1.23e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.29 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1731 LEGTLqsLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDA--------EEERRALESRLQSAK 1802
Cdd:TIGR02169 223 YEGYE--LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELnkkikdlgEEEQLRVKEKIGELE 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1803 TLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKM 1882
Cdd:TIGR02169 301 AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1883 RESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQ----SKT 1958
Cdd:TIGR02169 381 AETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQewklEQL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1959 SHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHD--------------VNNRVSEL-----QRQLQ 2019
Cdd:TIGR02169 461 AADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGgraveevlkasiqgVHGTVAQLgsvgeRYATA 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2020 DANTEKNR-----VED--------RFLSVEKV-------VNTMRTTETDLR----------------------------- 2050
Cdd:TIGR02169 541 IEVAAGNRlnnvvVEDdavakeaiELLKRRKAgratflpLNKMRDERRDLSilsedgvigfavdlvefdpkyepafkyvf 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2051 ------QQLETAKN----------------------------------------EKRVATKELEDLKRRLAQLENERRNS 2084
Cdd:TIGR02169 621 gdtlvvEDIEAARRlmgkyrmvtlegelfeksgamtggsraprggilfsrsepaELQRLRERLEGLKRELSSLQSELRRI 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2085 SQLSDGWK-------KEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLE-- 2155
Cdd:TIGR02169 701 ENRLDELSqelsdasRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEea 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2156 ------MENGNRILELTNKQRE-------------EQERQLIRMRQEKGQIEKVIENRErthrNRIKQLEDQIAILRDQL 2216
Cdd:TIGR02169 781 lndleaRLSHSRIPEIQAELSKleeevsriearlrEIEQKLNRLTLEKEYLEKEIQELQ----EQRIDLKEQIKSIEKEI 856
|
.
gi 1767287505 2217 D 2217
Cdd:TIGR02169 857 E 857
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1806-2127 |
1.28e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1806 RSQEEALKQRDEERRQMKSKMVAAELQARgkeaqlRHLNEQLKNLRTDLDNAHTdIRSLRDK---EEQWDSSRFQLETKM 1882
Cdd:pfam17380 287 RQQQEKFEKMEQERLRQEKEEKAREVERR------RKLEEAEKARQAEMDRQAA-IYAEQERmamERERELERIRQEERK 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1883 RESDsdtnkyqlQIASFESERQIltEKIKELDgalRLSDSKVQdmkdDTDKLRRDLTKAESVE-NELRKTIDIQSKTSHE 1961
Cdd:pfam17380 360 RELE--------RIRQEEIAMEI--SRMRELE---RLQMERQQ----KNERVRQELEAARKVKiLEEERQRKIQQQKVEM 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1962 YQLLKDQLLNTQNELngaNNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKnrvEDRFLSVEKVVNT 2041
Cdd:pfam17380 423 EQIRAEQEEARQREV---RRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEK---RDRKRAEEQRRKI 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2042 MRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQ------LENERRNSSQLsdgwkKEKITLLKKIELLENEKRRTDAA 2115
Cdd:pfam17380 497 LEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEeerrreAEEERRKQQEM-----EERRRIQEQMRKATEERSRLEAM 571
|
330
....*....|..
gi 1767287505 2116 IRETALQREAIE 2127
Cdd:pfam17380 572 EREREMMRQIVE 583
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1120-1251 |
1.32e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1120 ITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWK------------RELERLENEKDDLERRIRELEDELSQIGRGN 1187
Cdd:COG1579 47 LEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGnvrnnkeyealqKEIESLKRRISDLEDEILELMERIEELEEEL 126
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 1188 DKTENDITELKRKHAAEIDKLKSDISALhDKHLSDLDDEKEQYGKAV-ENLKSVEDDLRDKLNNL 1251
Cdd:COG1579 127 AELEAELAELEAELEEKKAELDEELAEL-EAELEELEAEREELAAKIpPELLALYERIRKRKNGL 190
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
851-987 |
1.33e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 43.47 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 851 HLFDIRHKLETEIKG----RQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDttiKGHQGKITHLENELHSRS 926
Cdd:smart00787 141 LLEGLKEGLDENLEGlkedYKLLMKELELLNSIKPKLRDRKDALEEELRQLKQLEDELE---DCDPTELDRAKEKLKKLL 217
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287505 927 GEIE----KLNDLNQRLQKEKQDIlnqklkldGDVQALKETIRKLENELEKLRNENKELVGKEAR 987
Cdd:smart00787 218 QEIMikvkKLEELEEELQELESKI--------EDLTNKKSELNTEIAEAEKKLEQCRGFTFKEIE 274
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
486-1492 |
1.41e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 44.27 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 486 SSADLLEELRKIRGGGSSEGDA-ELHKELMTKYEESIERNIELesrgDDSQRKIAELEAELRRNREK--LNEAQGALKKL 562
Cdd:TIGR01612 1299 NISDIREKSLKIIEDFSEESDInDIKKELQKNLLDAQKHNSDI----NLYLNEIANIYNILKLNKIKkiIDEVKEYTKEI 1374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 563 HEmaqdSEKNVDGTVSiKRTRSLSPGKTPLPPSEALRAVRNTFRNKDND-----IQQLERKLKIAESQVKEFlnkFENAD 637
Cdd:TIGR01612 1375 EE----NNKNIKDELD-KSEKLIKKIKDDINLEECKSKIESTLDDKDIDecikkIKELKNHILSEESNIDTY---FKNAD 1446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 638 EARRRLDKQFADAKREiSNLQKSVDEAERNSRRTDDKLRASEAERvAAEKARKFledelaKLQASFQKSSTDDARKL--- 714
Cdd:TIGR01612 1447 ENNENVLLLFKNIEMA-DNKSQHILKIKKDNATNDHDFNINELKE-HIDKSKGC------KDEADKNAKAIEKNKELfeq 1518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 715 -RDEMDEHTNSIQE-EFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNI 792
Cdd:TIGR01612 1519 yKKDVTELLNKYSAlAIKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDI 1598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 793 QKDLDDLREKYDRVHTDNEKILGELEHAQKaahlAEQQLKEIKIQRDDYQKQKDEharhlfDIRHKLETEIKGRQDLEKN 872
Cdd:TIGR01612 1599 QLSLENFENKFLKISDIKKKINDCLKETES----IEKKISSFSIDSQDTELKENG------DNLNSLQEFLESLKDQKKN 1668
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 873 GARNNDELDKLRQTISDYESQINLLRRhNDELDTTIKGHQGKITHlENELHSRSGEIE----------KLNDL-----NQ 937
Cdd:TIGR01612 1669 IEDKKKELDELDSEIEKIEIDVDQHKK-NYEIGIIEKIKEIAIAN-KEEIESIKELIEptienlissfNTNDLegidpNE 1746
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 938 RLQK---EKQDILNQKLKLDGDVQALKETIRKLENELEKLRN-----ENKELVGKEARARDAANQQLSRANLLNKELEDT 1009
Cdd:TIGR01612 1747 KLEEyntEIGDIYEEFIELYNIIAGCLETVSKEPITYDEIKNtrinaQNEFLKIIEIEKKSKSYLDDIEAKEFDRIINHF 1826
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1010 KQDLKHstdVNKQLEQDIRDLKERLANIGKGGRISRDSTtgtdggafgDRSSVADP-SRTRGAAGSTV---FVPAAEDIE 1085
Cdd:TIGR01612 1827 KKKLDH---VNDKFTKEYSKINEGFDDISKSIENVKNST---------DENLLFDIlNKTKDAYAGIIgkkYYSYKDEAE 1894
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1086 SRGGGEIDIPSSGDV-IHGRDGRD-----------GRDAGNRGTHTITNTKERIERIEKNILDRYhdDELVEhKIREVND 1153
Cdd:TIGR01612 1895 KIFINISKLANSINIqIQNNSGIDlfdniniailsSLDSEKEDTLKFIPSPEKEPEIYTKIRDSY--DTLLD-IFKKSQD 1971
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1154 RWKRELERLE--NEKDDLERRIR---ELEDELSQIGRGNDKTENDITELKRKhAAEIDKLKSDiSALHDK--HLSDLDDE 1226
Cdd:TIGR01612 1972 LHKKEQDTLNiiFENQQLYEKIQasnELKDTLSDLKYKKEKILNDVKLLLHK-FDELNKLSCD-SQNYDTilELSKQDKI 2049
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1227 KEQ---YGKAVENLKSVED--DLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRND----A 1297
Cdd:TIGR01612 2050 KEKidnYEKEKEKFGIDFDvkAMEEKFDNDIKDIEKFENNYKHSEKDNHDFSEEKDNIIQSKKKLKELTEAFNTEikiiE 2129
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1298 DKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAAN------------------DRIDHLTKTVNDHTSKVR---DLTSQ 1356
Cdd:TIGR01612 2130 DKIIEKNDLIDKLIEMRKECLLFSYATLVETLKSKVinhsefitsaakfskdffEFIEDISDSLNDDIDALQikyNLNQT 2209
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1357 VRHLEDELADT---KGNLVQKEMDLESTQNRLRSLedqhstLQSDANKwrgeLDAalrenDILKSNNTNMetdlTRLKNR 1433
Cdd:TIGR01612 2210 KKHMISILADAtkdHNNLIEKEKEATKIINNLTEL------FTIDFNN----ADA-----DILHNNKIQI----IYFNSE 2270
|
1050 1060 1070 1080 1090 1100
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1434 LKSAEDALKELKNSLSHAKTEKERLQNA-FREKTKQADHLNQLASQfdtKLTKLRNELQD 1492
Cdd:TIGR01612 2271 LHKSIESIKKLYKKINAFKLLNISHINEkYFDISKEFDNIIQLQKH---KLTENLNDLKE 2327
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
1117-1566 |
1.41e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 44.44 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1117 THTITNTKERIERIEKNILDRYHDDELveHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITE 1196
Cdd:PTZ00440 2163 SEAVTNSEEIIENIKKEIIEINENTEM--NTLENTADKLKELYENLKKKKNIINNIYKKINFIKLQEIENSSEKYNDISK 2240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1197 LKRKhaaEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRD----- 1271
Cdd:PTZ00440 2241 LFNN---VVETQKKKLLDNKNKINNIKDKINDKEKELINVDSSFTLESIKTFNEIYDDIKSNIGDLYKLEDTNNDelkkv 2317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1272 --YDEKINSLYGQNQKIKDEWDDFRNDA---DKEIQKWKTDAYTVRSEAKALETTNTALKAQLqaandRIDHLTKTVNDH 1346
Cdd:PTZ00440 2318 klYIENITHLLNRINTLINDLDNYQDENygkDKNIELNNENNSYIIKTKEKINNLKEEFSKLL-----KNIKRNNTLCNN 2392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1347 TSKVRDLTSQVRHLEDELADTKGNLVQKE--MDLESTQNRLRSL---EDQHSTLQSDANKWRGELDAALRENDILKSNNT 1421
Cdd:PTZ00440 2393 NNIKDFISNIGKSVETIKQRFSSNLPEKEklHQIEENLNEIKNImneTKRISNVDAFTNKILQDIDNEKNKENNNMNAEK 2472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1422 --NMETDLTRLKNRLKSAedaLKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLIT 1499
Cdd:PTZ00440 2473 idDLIENVTSHNEKIKSE---LLIINDALRRVKEKKDEMNKLFNSLTENNNNNNNSAKNIVDNSTYIINELESHVSKLNE 2549
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 1500 ----SDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSH-RVSEDSRLNALQELEARKYEIND 1566
Cdd:PTZ00440 2550 llsyIDNEIKELENEKLKLLEKAKIEESRKERERIESETQEDNTDEEQiNRQQQERLQKEEEQKAYSQERLN 2621
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1943-2082 |
1.50e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1943 SVENELRKTIDIQSKTSHEYQL------LKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQR 2016
Cdd:COG1579 1 AMPEDLRALLDLQELDSELDRLehrlkeLPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEE 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 2017 QLQDANTEK--NRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERR 2082
Cdd:COG1579 81 QLGNVRNNKeyEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD 148
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1233-1564 |
1.83e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 42.98 E-value: 1.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1233 AVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTdaytvr 1312
Cdd:COG1340 2 KTDELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKE------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1313 seakalettntaLKAQLQAANDRIDHLTKTVndhtskvrdltsqvrhleDELADTKGNLVQKEMDLESTQNRLRSLEDQH 1392
Cdd:COG1340 76 ------------LKEERDELNEKLNELREEL------------------DELRKELAELNKAGGSIDKLRKEIERLEWRQ 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1393 STLQSDANKwrgeldaalrENDILKsnntnmetDLTRLKNRLKSAEDALkELKNSLSHAKTEKERLQNAFREKTKQADHL 1472
Cdd:COG1340 126 QTEVLSPEE----------EKELVE--------KIKELEKELEKAKKAL-EKNEKLKELRAELKELRKEAEEIHKKIKEL 186
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1473 NQLASQFDTKLTKLRNELQDTNDklitsdtERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDL-AHSHRVSEDSRL 1551
Cdd:COG1340 187 AEEAQELHEEMIELYKEADELRK-------EADELHKEIVEAQEKADELHEEIIELQKELRELRKELkKLRKKQRALKRE 259
|
330
....*....|...
gi 1767287505 1552 NALQELEARKYEI 1564
Cdd:COG1340 260 KEKEELEEKAEEI 272
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
869-1032 |
2.00e-03 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 43.30 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 869 LEKNGARNNDELDKLRQTISDYESQINLLrrhnDELDTTIKGHQGKITHlENELHSrsgeiEKLNDLNQRLQKEKQDI-- 946
Cdd:pfam09726 400 LEQDIKKLKAELQASRQTEQELRSQISSL----TSLERSLKSELGQLRQ-ENDLLQ-----TKLHNAVSAKQKDKQTVqq 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 947 LNQKLKLDGDVQALKEtirKLENElEKLRNENKELVGKEARARDAANQQ------LSRANLLNKELEDTKQDLKHSTDVN 1020
Cdd:pfam09726 470 LEKRLKAEQEARASAE---KQLAE-EKKRKKEEEATAARAVALAAASRGecteslKQRKRELESEIKKLTHDIKLKEEQI 545
|
170
....*....|....*
gi 1767287505 1021 KQLE---QDIRDLKE 1032
Cdd:pfam09726 546 RELEikvQELRKYKE 560
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
879-1040 |
2.23e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 879 ELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKlkldgDVQ 958
Cdd:COG1579 18 ELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNK-----EYE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 959 ALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKhstDVNKQLEQDIRDLKERLANIG 1038
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD---EELAELEAELEELEAEREELA 169
|
..
gi 1767287505 1039 KG 1040
Cdd:COG1579 170 AK 171
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1224-1461 |
2.32e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.89 E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1224 DDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQk 1303
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAR- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1304 wktDAYTVRSEAKALETTntaLKAQ-LQAANDRIDhLTKTVNDHTskvRDLTSQVRHLEDELADTKGNLVQKEMDLESTQ 1382
Cdd:COG3883 94 ---ALYRSGGSVSYLDVL---LGSEsFSDFLDRLS-ALSKIADAD---ADLLEELKADKAELEAKKAELEAKLAELEALK 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 1383 NRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNA 1461
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1297-1643 |
2.34e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.89 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1297 ADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKtvndhtsKVRDLTSQVRHLEDELADTKGNLVQKEM 1376
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQA-------ELEALQAEIDKLQAEIAEAEAEIEERRE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1377 DLEstqNRLRSLEDQHSTLqsdankwrGELDAALrendilksNNTNMETDLTRLkNRLKSAEDALKELKNSLSHAKTEKE 1456
Cdd:COG3883 87 ELG---ERARALYRSGGSV--------SYLDVLL--------GSESFSDFLDRL-SALSKIADADADLLEELKADKAELE 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1457 RLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLitsDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTI 1536
Cdd:COG3883 147 AKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQL---SAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAA 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1537 DDLAhshrVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINFHTFV 1616
Cdd:COG3883 224 AAAA----AAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAA 299
|
330 340
....*....|....*....|....*..
gi 1767287505 1617 DGGAGYVDGVPGGTSVIGGGPSAQRSG 1643
Cdd:COG3883 300 SGGSGGGSGGAGGVGSGGGAGAVVGGA 326
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1726-2031 |
2.36e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.97 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1726 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLL 1805
Cdd:COG4372 38 FELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1806 RSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRES 1885
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAE 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1886 DSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKvqdmKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLL 1965
Cdd:COG4372 198 KEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLAL----SALLDALELEEDKEELLEEVILKEIEELELAILVEKDT 273
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287505 1966 KDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDR 2031
Cdd:COG4372 274 EEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAEL 339
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1210-1387 |
2.37e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1210 SDISALHDkhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKInslygqnqkikde 1289
Cdd:COG1579 4 EDLRALLD--LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEI------------- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1290 wddfrNDADKEIQKWKTDAYTVRS--EAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADT 1367
Cdd:COG1579 69 -----EEVEARIKKYEEQLGNVRNnkEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEK 143
|
170 180
....*....|....*....|
gi 1767287505 1368 KGNLVQKEMDLESTQNRLRS 1387
Cdd:COG1579 144 KAELDEELAELEAELEELEA 163
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
526-795 |
2.39e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 42.59 E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 526 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEmaQDSEKNvdgtvsiKRTRSLspgktplppSEALRAVRNTF 605
Cdd:COG1340 5 ELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAE--KRDELN-------AQVKEL---------REEAQELREKR 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 606 RNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKqfadAKREISNLQKSVDEAER----------NSRRTDDKL 675
Cdd:COG1340 67 DELNEKVKELKEERDELNEKLNELREELDELRKELAELNK----AGGSIDKLRKEIERLEWrqqtevlspeEEKELVEKI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 676 RASEAERVAAEKARKfLEDELAKLQASFQKSStDDARKLRDEMDEHTNSIQeEFKTRIDELNRRVENLLRENNRLKSEVN 755
Cdd:COG1340 143 KELEKELEKAKKALE-KNEKLKELRAELKELR-KEAEEIHKKIKELAEEAQ-ELHEEMIELYKEADELRKEADELHKEIV 219
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1767287505 756 PLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKD 795
Cdd:COG1340 220 EAQEKADELHEEIIELQKELRELRKELKKLRKKQRALKRE 259
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1174-1478 |
2.40e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 43.50 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1174 RELEDELSQIGrgNDKTENDitelkrkhAAEIDKLKSDISALHDKHLSDldDEKEQYGKAVENLKSVEDDLRDKLNNLE- 1252
Cdd:PRK10929 26 KQITQELEQAK--AAKTPAQ--------AEIVEALQSALNWLEERKGSL--ERAKQYQQVIDNFPKLSAELRQQLNNERd 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1253 --KQLADSLNrENELEREKRdydeKINS-LYGQNQKIKDEWDDFRNDADK--EIQKWKTDAYTVRSEA----KALETTNT 1323
Cdd:PRK10929 94 epRSVPPNMS-TDALEQEIL----QVSSqLLEKSRQAQQEQDRAREISDSlsQLPQQQTEARRQLNEIerrlQTLGTPNT 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1324 AL-KAQLQAandridhLTKTVNDHTSKVRDLtsqvrhledELADTKGNLVQK--EMDLESTQNRLRSLEDQHSTLQSDAN 1400
Cdd:PRK10929 169 PLaQAQLTA-------LQAESAALKALVDEL---------ELAQLSANNRQElaRLRSELAKKRSQQLDAYLQALRNQLN 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1401 KWRG-ELDAALRENDILKSNNTNMETDLTRL--KNRlksaedalkELKNSLSHaktekerlqnafrektkQADHLNQLAS 1477
Cdd:PRK10929 233 SQRQrEAERALESTELLAEQSGDLPKSIVAQfkINR---------ELSQALNQ-----------------QAQRMDLIAS 286
|
.
gi 1767287505 1478 Q 1478
Cdd:PRK10929 287 Q 287
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1318-1540 |
2.51e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.08 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1318 LETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTkgnlvqkEMDLESTQNRLRSLEDQHSTLQS 1397
Cdd:PHA02562 197 IKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNL-------VMDIEDPSAALNKLNTAAAKIKS 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1398 DANKWRGELDAaLRENDILKsnnTNMETdltrlknrLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLAs 1477
Cdd:PHA02562 270 KIEQFQKVIKM-YEKGGVCP---TCTQQ--------ISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQS- 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 1478 qfdTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLA 1540
Cdd:PHA02562 337 ---KKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKS 396
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1162-1279 |
2.53e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.99 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1162 LENEKDDLERRIRELE----DELSQIGrGNDKTEN---DITELKRKhaaeIDKLKSDISALHDKhlsdlddEKEQYGKAV 1234
Cdd:PRK05771 14 LKSYKDEVLEALHELGvvhiEDLKEEL-SNERLRKlrsLLTKLSEA----LDKLRSYLPKLNPL-------REEKKKVSV 81
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1767287505 1235 ENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSL 1279
Cdd:PRK05771 82 KSLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERL 126
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1157-1564 |
2.64e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.92 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1157 RELERLENEKDDLERriRELEDELSQIGRGN---------DKTENDITELKRKHAAEIDKLKSDISALHDKHlsdlddek 1227
Cdd:pfam06160 10 KEIDELEERKNELMN--LPVQEELSKVKKLNltgetqekfEEWRKKWDDIVTKSLPDIEELLFEAEELNDKY-------- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1228 eQYGKAvenlKSVEDDLRDKLNNLEKQLADSLNRENELeREKrdydEKINSLygQNQKIKDEWDDFRN----------DA 1297
Cdd:pfam06160 80 -RFKKA----KKALDEIEELLDDIEEDIKQILEELDEL-LES----EEKNRE--EVEELKDKYRELRKtllanrfsygPA 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1298 DKEIQKWKTDAYTVRSEAKALETTNTALKA--QLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKE 1375
Cdd:pfam06160 148 IDELEKQLAEIEEEFSQFEELTESGDYLEAreVLEKLEEETDALEELMEDIPPLYEELKTELPDQLEELKEGYREMEEEG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1376 MDLESTQ--NRLRSLEDQHSTLQSDANKwrGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKT 1453
Cdd:pfam06160 228 YALEHLNvdKEIQQLEEQLEENLALLEN--LELDEAEEALEEIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDYLEHAEE 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1454 EKERLQNAFREkTKQADHLN----QLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKS 1529
Cdd:pfam06160 306 QNKELKEELER-VQQSYTLNenelERVRGLEKQLEELEKRYDEIVERLEEKEVAYSELQEELEEILEQL----EEIEEEQ 380
|
410 420 430
....*....|....*....|....*....|....*
gi 1767287505 1530 DEYQTTIDDLahshRVSEDSRLNALQELEARKYEI 1564
Cdd:pfam06160 381 EEFKESLQSL----RKDELEAREKLDEFKLELREI 411
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1162-1304 |
2.77e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 42.31 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1162 LENEKDDLERRIRELEDELSQIgrgndktenditelkRKHAAEIDKLKSDISALHDKHLSDLDDEKEQyGKAVENLKSVE 1241
Cdd:smart00787 142 LEGLKEGLDENLEGLKEDYKLL---------------MKELELLNSIKPKLRDRKDALEEELRQLKQL-EDELEDCDPTE 205
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 1242 DD-LRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDAdKEIQKW 1304
Cdd:smart00787 206 LDrAKEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKL-EQCRGF 268
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1827-2090 |
2.78e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1827 VAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLrdkEEQWDSSRFQLETKMRESDsdtnKYQLQIASFESERQIL 1906
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEEL---NEEYNELQAELEALQAEID----KLQAEIAEAEAEIEER 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1907 TEKIKEldgalRLSDSKVQDmkDDTDKLRRdLTKAESVENELRKTIDIQSKTSHEYQLLkDQLLNTQNELngaNNRKQQL 1986
Cdd:COG3883 85 REELGE-----RARALYRSG--GSVSYLDV-LLGSESFSDFLDRLSALSKIADADADLL-EELKADKAEL---EAKKAEL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1987 ENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKE 2066
Cdd:COG3883 153 EAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAA 232
|
250 260
....*....|....*....|....
gi 1767287505 2067 LEDLKRRLAQLENERRNSSQLSDG 2090
Cdd:COG3883 233 AAAAAAAAAAAASAAGAGAAGAAG 256
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1327-1569 |
2.88e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.58 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1327 AQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGEL 1406
Cdd:COG4372 38 FELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1407 DAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAfREKTKQADHLNQLASQFDTKLTKL 1486
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQE-LQALSEAEAEQALDELLKEANRNA 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1487 RNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEIND 1566
Cdd:COG4372 197 EKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEE 276
|
...
gi 1767287505 1567 LTS 1569
Cdd:COG4372 277 ELE 279
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1921-2218 |
2.91e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.13 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1921 DSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDY 2000
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEEL 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2001 KQRVHDVNNRV-------------SELQRQLQDANTEKNRVEDRFLSVEKVVNTMRttetDLRQQLETAKNEKRVATKEL 2067
Cdd:PRK03918 272 KKEIEELEEKVkelkelkekaeeyIKLSEFYEEYLDELREIEKRLSRLEEEINGIE----ERIKELEEKEERLEELKKKL 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2068 EDLKRRLAQLE-------------NERRNSSQLSDGWKKEKITllKKIELLENEKRRTDAAIREtalqreaIEKSLNAME 2134
Cdd:PRK03918 348 KELEKRLEELEerhelyeeakakkEELERLKKRLTGLTPEKLE--KELEELEKAKEEIEEEISK-------ITARIGELK 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2135 RENKELYKN-------------CAQLQQQIAQLE-MENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRN 2200
Cdd:PRK03918 419 KEIKELKKAieelkkakgkcpvCGRELTEEHRKElLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKL 498
|
330
....*....|....*...
gi 1767287505 2201 RikQLEDQIAILRDQLDG 2218
Cdd:PRK03918 499 K--ELAEQLKELEEKLKK 514
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1156-1539 |
3.00e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 42.90 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1156 KRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHaaeiDKLKSDISA----------LHDKHLSDLDD 1225
Cdd:PRK04778 104 KHEINEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLY----RELRKSLLAnrfsfgpaldELEKQLENLEE 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1226 EKEQYGKAVEN-----LKSVEDDLRDKLNNLEKQLADSLNRENELEREkrdYDEKINSL-YGQNQKIKDEWDDFRNDADK 1299
Cdd:PRK04778 180 EFSQFVELTESgdyveAREILDQLEEELAALEQIMEEIPELLKELQTE---LPDQLQELkAGYRELVEEGYHLDHLDIEK 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1300 EIQKWKTDAYTVRSEAKALETTNTalKAQLQAANDRIDHLTKTV-------NDHTSKVRDLTSQVRHLEDELADTKGNL- 1371
Cdd:PRK04778 257 EIQDLKEQIDENLALLEELDLDEA--EEKNEEIQERIDQLYDILerevkarKYVEKNSDTLPDFLEHAKEQNKELKEEId 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1372 -VQK-----EMDLESTqnrlRSLEDQHSTLQSDANkwrgELDAALRENDILKSnntnmetdltrlknrlkSAEDALKELK 1445
Cdd:PRK04778 335 rVKQsytlnESELESV----RQLEKQLESLEKQYD----EITERIAEQEIAYS-----------------ELQEELEEIL 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1446 NSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTN---------DKLITSDTERNALRNELqklsQ 1516
Cdd:PRK04778 390 KQLEEIEKEQEKLSEMLQGLRKDELEAREKLERYRNKLHEIKRYLEKSNlpglpedylEMFFEVSDEIEALAEEL----E 465
|
410 420
....*....|....*....|...
gi 1767287505 1517 ELKFGNEQIQRKSDEYQTTIDDL 1539
Cdd:PRK04778 466 EKPINMEAVNRLLEEATEDVETL 488
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1147-1593 |
3.00e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.85 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1147 KIREVNDRWKRELERLENEK--------------DDLERRIRELEDELSQIGRGND---KTENDITELKRKHAAEIDKLK 1209
Cdd:pfam01576 265 KIRELEAQISELQEDLESERaarnkaekqrrdlgEELEALKTELEDTLDTTAAQQElrsKREQEVTELKKALEEETRSHE 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1210 SDISALHDKHLSDLDDEKEQygkaVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIK-- 1287
Cdd:pfam01576 345 AQLQEMRQKHTQALEELTEQ----LEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQar 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1288 -DEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDE--- 1363
Cdd:pfam01576 421 lSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDErns 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1364 -------------------------LADTKGNLVQKEM--------------DLESTQNRLRSLEDQHSTLQSDANKWRG 1404
Cdd:pfam01576 501 lqeqleeeeeakrnverqlstlqaqLSDMKKKLEEDAGtlealeegkkrlqrELEALTQQLEEKAAAYDKLEKTKNRLQQ 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1405 ELDAALRENDILKSNNTNMEtdltrlkNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKtkqadhlnqlasqfDTKLT 1484
Cdd:pfam01576 581 ELDDLLVDLDHQRQLVSNLE-------KKQKKFDQMLAEEKAISARYAEERDRAEAEAREK--------------ETRAL 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1485 KLRNELQDTNDKLITSDTERNALRNELQKL----------SQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNAL 1554
Cdd:pfam01576 640 SLARALEEALEAKEELERTNKQLRAEMEDLvsskddvgknVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLE 719
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 1767287505 1555 QELEARKYEIN-DLTSRLDSTEQRLATLQQDYIKADSERD 1593
Cdd:pfam01576 720 VNMQALKAQFErDLQARDEQGEEKRRQLVKQVRELEAELE 759
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
605-702 |
3.08e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 3.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 605 FRNKDNDIQQLERKLKIAESQVKeflNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLraseaERVA 684
Cdd:PRK12704 77 LRERRNELQKLEKRLLQKEENLD---RKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQEL-----ERIS 148
|
90 100
....*....|....*....|....
gi 1767287505 685 ---AEKARKFLEDEL---AKLQAS 702
Cdd:PRK12704 149 gltAEEAKEILLEKVeeeARHEAA 172
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1142-1382 |
3.08e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 42.21 E-value: 3.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1142 ELVEH--KIREVNDRWKRELERLENEKDDLERRIRELEDELSQIgrgndKTENDITELKRKhaaEIDKLKSDISALHDKH 1219
Cdd:COG1340 54 ELREEaqELREKRDELNEKVKELKEERDELNEKLNELREELDEL-----RKELAELNKAGG---SIDKLRKEIERLEWRQ 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1220 L-SDLDDEKEQygKAVENLKSVEDDL--RDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRND 1296
Cdd:COG1340 126 QtEVLSPEEEK--ELVEKIKELEKELekAKKALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1297 ADKeiqkwktdaytVRSEAKalettntALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEM 1376
Cdd:COG1340 204 ADE-----------LRKEAD-------ELHKEIVEAQEKADELHEEIIELQKELRELRKELKKLRKKQRALKREKEKEEL 265
|
....*.
gi 1767287505 1377 DLESTQ 1382
Cdd:COG1340 266 EEKAEE 271
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
866-1036 |
3.23e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 866 RQDLEKNGARNNDELDKLRQTISDYESQINLLRRHND--ELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEK 943
Cdd:COG3206 170 REEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGlvDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 944 QDILNQ--KLKLDGDVQALKETIRKLENELEKLR-----------------NENKELVGKEA-RARDAANQQLSRANLLN 1003
Cdd:COG3206 250 GSGPDAlpELLQSPVIQQLRAQLAELEAELAELSarytpnhpdvialraqiAALRAQLQQEAqRILASLEAELEALQARE 329
|
170 180 190
....*....|....*....|....*....|...
gi 1767287505 1004 KELEDTKQDLKHSTDVNKQLEQDIRDLKERLAN 1036
Cdd:COG3206 330 ASLQAQLAQLEARLAELPELEAELRRLEREVEV 362
|
|
| AAA_13 |
pfam13166 |
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA ... |
521-910 |
3.32e-03 |
|
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.
Pssm-ID: 463796 [Multi-domain] Cd Length: 712 Bit Score: 42.74 E-value: 3.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 521 IERNIELESR-------GDDS---QRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRslspgKT 590
Cdd:pfam13166 71 VEENLSEQGEikpiftlGEESieiQEKIAKLKKEIKDHEEKLDAAEANLQKLDKEKEKLEADFLDECWKKIKR-----KK 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 591 PLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEflnkfenaDEARRRLDKQFADAKREISNLQKSV---DEAERN 667
Cdd:pfam13166 146 NSALSEALNGFKYEANFKSRLLREIEKDNFNAGVLLSD--------EDRKAALATVFSDNKPEIAPLTFNVidfDALEKA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 668 SRRTDDKLRASEA-ERVAAE-KARKFLEDELAKLQAS-----FQKSSTDDARKLR------DEMDEHTNSIQEefktRID 734
Cdd:pfam13166 218 EILIQKVIGKSSAiEELIKNpDLADWVEQGLELHKAHldtcpFCGQPLPAERKAAleahfdDEFTEFQNRLQK----LIE 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 735 ELNRRVENLL----------RENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKetqirySDDIRRNIQkdLDDLREKYD 804
Cdd:pfam13166 294 KVESAISSLLaqlpavsdlaSLLSAFELDVEDIESEAEVLNSQLDGLRRALEAK------RKDPFKSIE--LDSVDAKIE 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 805 RVhTDNEKILGEL--EHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKgrqDLEKNGARNNDELDK 882
Cdd:pfam13166 366 SI-NDLVASINELiaKHNEITDNFEEEKNKAKKKLRLHLVEEFKSEIDEYKDKYAGLEKAIN---SLEKEIKNLEAEIKK 441
|
410 420
....*....|....*....|....*...
gi 1767287505 883 LRQTISDYESQINLLRRHNDELDTTIKG 910
Cdd:pfam13166 442 LREEIKELEAQLRDHKPGADEINKLLKA 469
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1987-2353 |
3.45e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1987 ENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRflsvekvVNTMRTTETDLRQQLETAknEKRVATKE 2066
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-------LEALQAEIDKLQAEIAEA--EAEIEERR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2067 lEDLKRRLAQLENERRNSSQL-----SDGWKkekiTLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMErenkely 2141
Cdd:COG3883 86 -EELGERARALYRSGGSVSYLdvllgSESFS----DFLDRLSALSKIADADADLLEELKADKAELEAKKAELE------- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2142 kncaqlqqqiaqlemengnrileltnKQREEQERQLIRMRQEKGQIEKVIENRErthrNRIKQLEDQIAILRDQLDGERR 2221
Cdd:COG3883 154 --------------------------AKLAELEALKAELEAAKAELEAQQAEQE----ALLAQLSAEEAAAEAQLAELEA 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2222 RRREYVDRSMVNDIGRLGSNVLGIRNSYGDNSIDAIINGGSRSVGFYPRSTFASNPLTPPLGSSTPTHRPHVTDFRSAVD 2301
Cdd:COG3883 204 ELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAG 283
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 2302 AG-SSYRRPISTIEDSGSVYGGSIRDRDSVYGGGGRDSSFGTRAGDSISRAGV 2353
Cdd:COG3883 284 GGaGGAGGGGGGGGAASGGSGGGSGGAGGVGSGGGAGAVVGGASAGGGGGSGG 336
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
648-847 |
3.51e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 648 ADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEhtnsIQE 727
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQA--------EIDKLQAEIAE----AEA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 728 EFKTRIDELNRRVENLLRENNR-------LKSE-----------VNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIR 789
Cdd:COG3883 80 EIEERREELGERARALYRSGGSvsyldvlLGSEsfsdfldrlsaLSKIADADADLLEELKADKAELEAKKAELEAKLAEL 159
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 790 RNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDE 847
Cdd:COG3883 160 EALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1261-1585 |
3.52e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.02 E-value: 3.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1261 RENELE--REKRD-----YDE------KINSLYGQ-NQKIKDEWDD-FRNDADKEIQKWKTDAYTVRSEAKALETTNTAL 1325
Cdd:COG3096 783 REKRLEelRAERDelaeqYAKasfdvqKLQRLHQAfSQFVGGHLAVaFAPDPEAELAALRQRRSELERELAQHRAQEQQL 862
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1326 KAQLQAANDRIDHLTKTV-NDHTSKVRDLTSQVRHLEDELADTKgnlvQKEMDLESTQNRLRSLEDQHSTLQSDAnkwrg 1404
Cdd:COG3096 863 RQQLDQLKEQLQLLNKLLpQANLLADETLADRLEELREELDAAQ----EAQAFIQQHGKALAQLEPLVAVLQSDP----- 933
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1405 eldaalRENDILKSNNTNMETDLTRLKNRLksaeDALKELKNSLSH--------AKTEKERLQNAFREKTKQADhlnQLA 1476
Cdd:COG3096 934 ------EQFEQLQADYLQAKEQQRRLKQQI----FALSEVVQRRPHfsyedavgLLGENSDLNEKLRARLEQAE---EAR 1000
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1477 SQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDeyqTTIDDLAHSHRvseDSRLNALQE 1556
Cdd:COG3096 1001 REAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQEL----EELGVQAD---AEAEERARIRR---DELHEELSQ 1070
|
330 340 350
....*....|....*....|....*....|...
gi 1767287505 1557 LEARKYEIN-DLTSR---LDSTEQRLATLQQDY 1585
Cdd:COG3096 1071 NRSRRSQLEkQLTRCeaeMDSLQKRLRKAERDY 1103
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1732-1947 |
3.60e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1732 EGTLQSLLNKIEKLEMERNELRDTLARMKKKttethttINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEA 1811
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAE-------LEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1812 LKQ--RDEERRQMKSKMVAAELQARG----------KEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLE 1879
Cdd:COG3883 88 LGEraRALYRSGGSVSYLDVLLGSESfsdfldrlsaLSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELE 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 1880 TKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENE 1947
Cdd:COG3883 168 AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1748-2076 |
3.64e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1748 ERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRD----------- 1816
Cdd:COG3096 279 ERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQTALRQQEkieryqedlee 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1817 -EERRQMKSKMVA-AELQARGKEAQLRHLNEQLKNLRTDL--------------------------------------DN 1856
Cdd:COG3096 359 lTERLEEQEEVVEeAAEQLAEAEARLEAAEEEVDSLKSQLadyqqaldvqqtraiqyqqavqalekaralcglpdltpEN 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1857 AHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNK----YQL--QIASfESERQILTEKIKELdgaLRLSDSKvQDMKDD 1930
Cdd:COG3096 439 AEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQfekaYELvcKIAG-EVERSQAWQTAREL---LRRYRSQ-QALAQR 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1931 TDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR 2010
Cdd:COG3096 514 LQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRAR 593
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 2011 VSELQ------RQLQDA-NTEKNRVEDRFLSVEKVVNTMRTTETDLRqQLETAKNEKRVATKELEDLKRRLAQ 2076
Cdd:COG3096 594 IKELAarapawLAAQDAlERLREQSGEALADSQEVTAAMQQLLERER-EATVERDELAARKQALESQIERLSQ 665
|
|
| Rabaptin |
pfam03528 |
Rabaptin; |
1241-1605 |
3.79e-03 |
|
Rabaptin;
Pssm-ID: 367545 [Multi-domain] Cd Length: 486 Bit Score: 42.40 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1241 EDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALET 1320
Cdd:pfam03528 3 DEDLQQRVAELEKENAEFYRLKQQLEAEFNQKRAKFKELYLAKEEDLKRQNAVLQEAQVELDALQNQLALARAEMENIKA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1321 TNTALKAQLQAANDRI-----DHLTKTVNDHTSKVRDLTSQVRH-LEDELAdtKGNLVQKEMDLESTQNRLRSLEDQHS- 1393
Cdd:pfam03528 83 VATVSENTKQEAIDEVksqwqEEVASLQAIMKETVREYEVQFHRrLEQERA--QWNQYRESAEREIADLRRRLSEGQEEe 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1394 TLQSDANKwrgeldaALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNS----LSHA------------------ 1451
Cdd:pfam03528 161 NLEDEMKK-------AQEDAEKLRSVVMPMEKEIAALKAKLTEAEDKIKELEASkmkeLNHYleaekscrtdlemyvavl 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1452 KTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITS------DTER--NALRNELQKLSQELKFGN- 1522
Cdd:pfam03528 234 NTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESqrllmrDMQRmeSVLTSEQLRQVEEIKKKDq 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1523 --EQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQElearKYEINDLTSRLDSTEQRLATLQQDYIKADS-----ERDIL 1595
Cdd:pfam03528 314 eeHKRARTHKEKETLKSDREHTVSIHAVFSPAGVET----SAPLSNVEEQINSAHGSVHSLDTDVVLGAGdsfnkQEDPF 389
|
410
....*....|
gi 1767287505 1596 SDALRRFQSS 1605
Cdd:pfam03528 390 KEGLRRAQST 399
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1119-1607 |
3.92e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.65 E-value: 3.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1119 TITNTKERIERIEKNILDRYHDDELVEHKIR------EVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTEn 1192
Cdd:TIGR00618 216 TYHERKQVLEKELKHLREALQQTQQSHAYLTqkreaqEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAP- 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1193 diTELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDlRDKLNNLEKQlADSLNRENELEREKRDY 1272
Cdd:TIGR00618 295 --LAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQ-RRLLQTLHSQ-EIHIRDAHEVATSIREI 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1273 DEKINSL---YGQNQKIKDEWDDFRNDADKEIQKWKTDAYTV---RSEAKALETTNTALKAQLQAANDRID----HLTKT 1342
Cdd:TIGR00618 371 SCQQHTLtqhIHTLQQQKTTLTQKLQSLCKELDILQREQATIdtrTSAFRDLQGQLAHAKKQQELQQRYAElcaaAITCT 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1343 VNDHTSKVRDLTSQVRHL--EDELADTKGNLVQKEMdlESTQNRLRSLEdQHSTLQSDANKWRGELDAALRENDILKSNN 1420
Cdd:TIGR00618 451 AQCEKLEKIHLQESAQSLkeREQQLQTKEQIHLQET--RKKAVVLARLL-ELQEEPCPLCGSCIHPNPARQDIDNPGPLT 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1421 TNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDtkltKLRNELQDTNDKLITS 1500
Cdd:TIGR00618 528 RRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIP----NLQNITVRLQDLTEKL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1501 DTERNALRNELQKL---------SQELKFGNEQIQRKSDEYQTTIDDLA----------HSHRVSED------SRLNALQ 1555
Cdd:TIGR00618 604 SEAEDMLACEQHALlrklqpeqdLQDVRLHLQQCSQELALKLTALHALQltltqervreHALSIRVLpkellaSRQLALQ 683
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1767287505 1556 ELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSAN 1607
Cdd:TIGR00618 684 KMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLA 735
|
|
| Tropomyosin |
pfam00261 |
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 ... |
612-820 |
4.01e-03 |
|
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organization and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterized by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Pssm-ID: 459736 [Multi-domain] Cd Length: 235 Bit Score: 41.17 E-value: 4.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 612 IQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLraSEAERVA--AEKAR 689
Cdd:pfam00261 3 MQQIKEELDEAEERLKEAMKKLEEAEKRAEKAEAEVAALNRRIQLLEEELERTEERLAEALEKL--EEAEKAAdeSERGR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 690 KFLEDELAKLQAS--FQKSSTDDARKLRDEMDEHTNSIQEEFKT------RIDELNRRVENLLRE-NNRLKSEVNPLK-- 758
Cdd:pfam00261 81 KVLENRALKDEEKmeILEAQLKEAKEIAEEADRKYEEVARKLVVvegdleRAEERAELAESKIVElEEELKVVGNNLKsl 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 759 ----DKYRDLENEYNSTQRRIEE--KETQIRYSDDIRR--NIQKDLDDLREKYDRVHTDNEKILGELEHA 820
Cdd:pfam00261 161 easeEKASEREDKYEEQIRFLTEklKEAETRAEFAERSvqKLEKEVDRLEDELEAEKEKYKAISEELDQT 230
|
|
| DUF4686 |
pfam15742 |
Domain of unknown function (DUF4686); This family of proteins is found in eukaryotes. Proteins ... |
1976-2216 |
4.11e-03 |
|
Domain of unknown function (DUF4686); This family of proteins is found in eukaryotes. Proteins in this family are typically between 498 and 775 amino acids in length. There is a conserved DLK sequence motif.
Pssm-ID: 464838 [Multi-domain] Cd Length: 384 Bit Score: 41.97 E-value: 4.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1976 LNGANNRKQQLenellNVRSEVRDYKQRVHDVNNRVSELQRQLQDAntEKNRVEDRFLS----VEKVVNTMRTTETDLRQ 2051
Cdd:pfam15742 100 LKQAQSIKSQN-----SLQEKLAQEKSRVADAEEKILELQQKLEHA--HKVCLTDTCILekkqLEERIKEASENEAKLKQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2052 QLETAKNEKRVATKELEDLKRRLAQLEN-----ERRNSSQLSDGWKKEkiTLLKKielLENEKRRTDAAIRetaLQREAI 2126
Cdd:pfam15742 173 QYQEEQQKRKLLDQNVNELQQQVRSLQDkeaqlEMTNSQQQLRIQQQE--AQLKQ---LENEKRKSDEHLK---SNQELS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2127 EKsLNAMERENKELYKNCAQLQQQIAQlEMENGNrileltnkqrEEQERQLIRMRQEKGQIEKVIENRERthrnRIKQLE 2206
Cdd:pfam15742 245 EK-LSSLQQEKEALQEELQQVLKQLDV-HVRKYN----------EKHHHHKAKLRRAKDRLVHEVEQRDE----RIKQLE 308
|
250
....*....|
gi 1767287505 2207 DQIAILRDQL 2216
Cdd:pfam15742 309 NEIGILQQQS 318
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1770-1914 |
4.30e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 4.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1770 INQKETRYRNIEDNLQDAEEERRALESRLQ---------SAKTLLRSQE--EALKQRDEERRQMKSKmvaAELQARGKEA 1838
Cdd:PRK04863 937 FEQLKQDYQQAQQTQRDAKQQAFALTEVVQrrahfsyedAAEMLAKNSDlnEKLRQRLEQAEQERTR---AREQLRQAQA 1013
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1839 QLRHLNEqlknLRTDLDNAHTDIRSLRDK----------------EEQWDSSRFQLETKMRESDSDTNKYQLQIASFESE 1902
Cdd:PRK04863 1014 QLAQYNQ----VLASLKSSYDAKRQMLQElkqelqdlgvpadsgaEERARARRDELHARLSANRSRRNQLEKQLTFCEAE 1089
|
170
....*....|..
gi 1767287505 1903 RQILTEKIKELD 1914
Cdd:PRK04863 1090 MDNLTKKLRKLE 1101
|
|
| HemX |
COG2959 |
Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis ... |
879-976 |
4.39e-03 |
|
Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis HemX, COG0755, no evidence of involvement in heme biosynthesis) [General function prediction only];
Pssm-ID: 442199 [Multi-domain] Cd Length: 361 Bit Score: 41.87 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 879 ELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQD------------I 946
Cdd:COG2959 61 ELAQLAQQLAALQQQAQELRALAQQLQELLQQLAARLAQLEQRLAELQQQLAALQQLLQSLSGSSRDdwllaeaeyllrL 140
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1767287505 947 LNQKLKLDGDVQ----ALKE--------------TIRK-LENELEKLRN 976
Cdd:COG2959 141 AGQQLQLEGDVKtalaALQSadarlarlndpsllPVRRaIARDIARLRA 189
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1217-1361 |
4.73e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 41.54 E-value: 4.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1217 DKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQladsLNRENELEREKRDYDEkiNSLYGQNQKIKDEwddfrnd 1296
Cdd:smart00787 150 DENLEGLKEDYKLLMKELELLNSIKPKLRDRKDALEEE----LRQLKQLEDELEDCDP--TELDRAKEKLKKL------- 216
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 1297 aDKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVND---HT-SKVRDLTSQVRHLE 1361
Cdd:smart00787 217 -LQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQcrgFTfKEIEKLKEQLKLLQ 284
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1894-2024 |
4.80e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 4.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1894 LQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDI------QSKTSHEYQLLkd 1967
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKyeeqlgNVRNNKEYEAL-- 94
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 1968 qllntQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTE 2024
Cdd:COG1579 95 -----QKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE 146
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
672-970 |
5.08e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.22 E-value: 5.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 672 DDKLRASEAERV--AAEKARKfLEDELAKLQASFQKSSTDDARKlrdemdehtnsiQEEFKTRIDELNRRVENLLrenNR 749
Cdd:PRK05771 34 EDLKEELSNERLrkLRSLLTK-LSEALDKLRSYLPKLNPLREEK------------KKVSVKSLEELIKDVEEEL---EK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 750 LKSEVNPLKDKYRDLENEynstQRRIEEKETQIRYsddiRRNIQKDLDDLREkYDRVHTdnekILGELEHAQKAAHLAEQ 829
Cdd:PRK05771 98 IEKEIKELEEEISELENE----IKELEQEIERLEP----WGNFDLDLSLLLG-FKYVSV----FVGTVPEDKLEELKLES 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 830 QLKEIKIQRDDYQKqkdehaRHLFDIRHKlETEIKGRQDLEKNGARNND--ELDKLRQTISDYESQINLLRRHNDELDTT 907
Cdd:PRK05771 165 DVENVEYISTDKGY------VYVVVVVLK-ELSDEVEEELKKLGFERLEleEEGTPSELIREIKEELEEIEKERESLLEE 237
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 908 IKghqGKITHLENELHSRSGEIEklndlnqrLQKEKQDILNQKLK------LDG-----DVQALKETIRKLENE 970
Cdd:PRK05771 238 LK---ELAKKYLEELLALYEYLE--------IELERAEALSKFLKtdktfaIEGwvpedRVKKLKELIDKATGG 300
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
918-1342 |
5.23e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 5.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 918 LENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKL----DGDVQALKETIRKLENELEKLRNENKELVGKEARARDAAN 993
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEaeekEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 994 -----QQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGD---------- 1058
Cdd:COG4717 127 llplyQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDlaeeleelqq 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1059 ---------RSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHT---------I 1120
Cdd:COG4717 207 rlaeleeelEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAgvlflvlglL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1121 TNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRK 1200
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1201 -HAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADS-----LNRENELEREKRDYDE 1274
Cdd:COG4717 367 eLEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdeeelEEELEELEEELEELEE 446
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287505 1275 KINSLYGQNQKIKDEWDDFRNdaDKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKT 1342
Cdd:COG4717 447 ELEELREELAELEAELEQLEE--DGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
707-826 |
5.29e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 5.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 707 STDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKetqIRYSD 786
Cdd:COG2433 389 ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEERRE---IRKDR 465
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1767287505 787 DIRRnIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHL 826
Cdd:COG2433 466 EISR-LDREIERLERELEEERERIEELKRKLERLKELWKL 504
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
792-1094 |
5.46e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 792 IQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEharhlfdIRHKLETEIKGRQDLEK 871
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEE-------LNEQLQAAQAELAQAQE 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 872 NGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL 951
Cdd:COG4372 102 ELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEA 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 952 KLDGDvQALKETIRKLENELEKLRNENKELvgKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLK 1031
Cdd:COG4372 182 EQALD-ELLKEANRNAEKEEELAEAEKLIE--SLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILK 258
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287505 1032 ERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDI 1094
Cdd:COG4372 259 EIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAAL 321
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
315-813 |
5.53e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.20 E-value: 5.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 315 NANYEMIARLDEERRRSDEYRMQWENERQKSLSLEDENDRLR-----------REFERYANDSKDKEKTFINRERNLAQY 383
Cdd:PRK01156 245 SSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIIndpvyknrnyiNDYFKYKNDIENKKQILSNIDAEINKY 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 384 lSDEQRKMLDL---WTELQRVRKQFSDLKtHTEEDLDKQKAEFTRAIRNVNNIsrnaafsagagdglglygledggdvNR 460
Cdd:PRK01156 325 -HAIIKKLSVLqkdYNDYIKKKSRYDDLN-NQILELEGYEMDYNSYLKSIESL-------------------------KK 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 461 TTNNYEKVFIETIKRMNGTGGAGSASSADLLEELRKIRGG----GSSEGDAELHKELMTKYEESIERNIE-LESRG---- 531
Cdd:PRK01156 378 KIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKlqdiSSKVSSLNQRIRALRENLDELSRNMEmLNGQSvcpv 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 532 -------DDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLspgktplppsealravrnT 604
Cdd:PRK01156 458 cgttlgeEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSI------------------N 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 605 FRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREI---SNLQKSVDEAERNSRRTDDKlraseae 681
Cdd:PRK01156 520 EYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSwlnALAVISLIDIETNRSRSNEI------- 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 682 rvaaEKARKFLEDELAKLQASFQ--KSSTDDA-RKLRDEMDEHTNSIQE--EFKTRIDELNRRVENLLRENNRLKSevnp 756
Cdd:PRK01156 593 ----KKQLNDLESRLQEIEIGFPddKSYIDKSiREIENEANNLNNKYNEiqENKILIEKLRGKIDNYKKQIAEIDS---- 664
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 757 lkdkyrdLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKI 813
Cdd:PRK01156 665 -------IIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINEL 714
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1152-1596 |
5.60e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.08 E-value: 5.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1152 NDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEiDKLKSDISALHDKHLSDLDDEKEQyg 1231
Cdd:pfam01576 147 NSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKE-EKGRQELEKAKRKLEGESTDLQEQ-- 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1232 kaVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDD---FRNDADKEIQKWKTDA 1308
Cdd:pfam01576 224 --IAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESeraARNKAEKQRRDLGEEL 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1309 YTVRSEakaLETT--NTALKAQLQAANDR-IDHLTKTVND----HTSKVRDL----TSQVRHLEDELADTKGNLVqkemd 1377
Cdd:pfam01576 302 EALKTE---LEDTldTTAAQQELRSKREQeVTELKKALEEetrsHEAQLQEMrqkhTQALEELTEQLEQAKRNKA----- 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1378 lestqnrlrSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKER 1457
Cdd:pfam01576 374 ---------NLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELES 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1458 LQNAFREKTKQADHLNQLASQFDTKLTKLRNELQ-DTNDKLITS------DTERNALRNEL-------QKLSQELKFGNE 1523
Cdd:pfam01576 445 VSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQeETRQKLNLStrlrqlEDERNSLQEQLeeeeeakRNVERQLSTLQA 524
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287505 1524 QIQrksdEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDY----IKADSERDILS 1596
Cdd:pfam01576 525 QLS----DMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELddllVDLDHQRQLVS 597
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
1413-1519 |
5.73e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 41.64 E-value: 5.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1413 NDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAF-REKTKQADHLNQLASQFDTKLTKLRNELQ 1491
Cdd:TIGR04320 242 NKFDKTPIPNPPNSLAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYaAAQAALATAQKELANAQAQALQTAQNNLA 321
|
90 100
....*....|....*....|....*...
gi 1767287505 1492 DTNDKLITSDTERNALRNELQKLSQELK 1519
Cdd:TIGR04320 322 TAQAALANAEARLAKAKEALANLNADLA 349
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
712-1040 |
5.93e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 41.75 E-value: 5.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 712 RKLRDEMDeHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLeneynstQRRIEEKETQirYSDDIRrN 791
Cdd:PRK04778 101 RKAKHEIN-EIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYREL-------RKSLLANRFS--FGPALD-E 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 792 IQKDLDDLREKYDRVHTDNEKilGELEHAQKAAHLAEQQLKEIKIQRDD----YQKQKDEHARHLFDIRHkleteikGRQ 867
Cdd:PRK04778 170 LEKQLENLEEEFSQFVELTES--GDYVEAREILDQLEEELAALEQIMEEipelLKELQTELPDQLQELKA-------GYR 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 868 DLEKNGARnndeLDKLrqtisDYESQINLLRRHNDELDTTIKghQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDIL 947
Cdd:PRK04778 241 ELVEEGYH----LDHL-----DIEKEIQDLKEQIDENLALLE--ELDLDEAEEKNEEIQERIDQLYDILEREVKARKYVE 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 948 NQKLKLDGDVQALKETIRKLENELEKLrNENKELVGKEARARDAANQQLSRanlLNKELEDTKQDLKHSTDVNKQLEQDI 1027
Cdd:PRK04778 310 KNSDTLPDFLEHAKEQNKELKEEIDRV-KQSYTLNESELESVRQLEKQLES---LEKQYDEITERIAEQEIAYSELQEEL 385
|
330
....*....|...
gi 1767287505 1028 RDLKERLANIGKG 1040
Cdd:PRK04778 386 EEILKQLEEIEKE 398
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
1161-1271 |
6.20e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.99 E-value: 6.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1161 RLEN-----EKDDLERRIRELEDELSQIGRgndktENDITELKRKHA--AEIDKLKSDISALHDKHLSdlddEKEQYGKa 1233
Cdd:COG0542 403 RMEIdskpeELDELERRLEQLEIEKEALKK-----EQDEASFERLAElrDELAELEEELEALKARWEA----EKELIEE- 472
|
90 100 110
....*....|....*....|....*....|....*...
gi 1767287505 1234 VENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRD 1271
Cdd:COG0542 473 IQELKEELEQRYGKIPELEKELAELEEELAELAPLLRE 510
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1140-1824 |
6.82e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.97 E-value: 6.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1140 DDELVEHKIREVN--DRWKRELERLENEKDDLERRIRELEDELSQigrgndktENDITELKRKHAAEIDKLKSDISALHD 1217
Cdd:PRK03918 143 SDESREKVVRQILglDDYENAYKNLGEVIKEIKRRIERLEKFIKR--------TENIEELIKEKEKELEEVLREINEISS 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1218 KhLSDLDDEKEQYGKAVENLKSveddLRDKLNNLEKQLAdslnrenELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDA 1297
Cdd:PRK03918 215 E-LPELREELEKLEKEVKELEE----LKEEIEELEKELE-------SLEGSKRKLEEKIRELEERIEELKKEIEELEEKV 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1298 dKEIQ--KWKTDAYT--------VRSEAKALETTNTALKAQLQAANDRIDHLtktvNDHTSKVRDLTSQVRHLEDELADT 1367
Cdd:PRK03918 283 -KELKelKEKAEEYIklsefyeeYLDELREIEKRLSRLEEEINGIEERIKEL----EEKEERLEELKKKLKELEKRLEEL 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1368 KGNlVQKEMDLESTQNRLRSLEDQHSTLQSDanKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNS 1447
Cdd:PRK03918 358 EER-HELYEEAKAKKEELERLKKRLTGLTPE--KLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKA 434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1448 -----LSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTnDKLITSDTERNALR---NELQKLSQELK 1519
Cdd:PRK03918 435 kgkcpVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELREL-EKVLKKESELIKLKelaEQLKELEEKLK 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1520 -FGNEQIQRKSDEYQTTIDDLA--HSHRVSEDSRLNALQELEARKYEINdltSRLDSTEQRLATLQQDYIKAD-SERDIL 1595
Cdd:PRK03918 514 kYNLEELEKKAEEYEKLKEKLIklKGEIKSLKKELEKLEELKKKLAELE---KKLDELEEELAELLKELEELGfESVEEL 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1596 SDALRRFQSSANRVInfhtfvdggagyvdgvpggtsvigggpsaqrsgaydpssggvigsgisggpggsdfgreieigrg 1675
Cdd:PRK03918 591 EERLKELEPFYNEYL----------------------------------------------------------------- 605
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1676 dsdqsdvayprsvpfppsadfssgrpgaasaggrvinnldgtttvnmnggfDIANLEGTLQSLLNKIEKLEMERNELRDT 1755
Cdd:PRK03918 606 ---------------------------------------------------ELKDAEKELEREEKELKKLEEELDKAFEE 634
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1756 LARMKKKTTETHTTINQ------------KETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMK 1823
Cdd:PRK03918 635 LAETEKRLEELRKELEElekkyseeeyeeLREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELE 714
|
.
gi 1767287505 1824 S 1824
Cdd:PRK03918 715 K 715
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1424-1599 |
6.88e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 6.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1424 ETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELqdtndKLITSDTE 1503
Cdd:COG1579 16 DSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQL-----GNVRNNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1504 RNALRNELQKLSQELKFGNEQIQR---KSDEYQTTIDDLAhshrvsedsrlnalQELEARKYEINDLTSRLDsteQRLAT 1580
Cdd:COG1579 91 YEALQKEIESLKRRISDLEDEILElmeRIEELEEELAELE--------------AELAELEAELEEKKAELD---EELAE 153
|
170
....*....|....*....
gi 1767287505 1581 LQQDYIKADSERDILSDAL 1599
Cdd:COG1579 154 LEAELEELEAEREELAAKI 172
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
710-1032 |
7.96e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.86 E-value: 7.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 710 DARKLRDEMDEHTNSIQEEFKTRIDELNRRVEnllrennrLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIR 789
Cdd:COG3096 279 ERRELSERALELRRELFGARRQLAEEQYRLVE--------MARELEELSARESDLEQDYQAASDHLNLVQTALRQQEKIE 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 790 RnIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQK-------------------------- 843
Cdd:COG3096 351 R-YQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQaldvqqtraiqyqqavqalekaralc 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 844 -------------------QKDEHARHLFDIRHKLETEIKGRQDLEK---------NGARNNDELDKLRQTISDYESQIN 895
Cdd:COG3096 430 glpdltpenaedylaafraKEQQATEEVLELEQKLSVADAARRQFEKayelvckiaGEVERSQAWQTARELLRRYRSQQA 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 896 LLRRhndeldttIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEkqdiLNQKLKLDGDVQALKETIRKLENELEK-- 973
Cdd:COG3096 510 LAQR--------LQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQ----LDAAEELEELLAELEAQLEELEEQAAEav 577
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 974 -----LRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 1032
Cdd:COG3096 578 eqrseLRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQEVTAAMQQLLERERE 641
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1416-1605 |
7.98e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.54 E-value: 7.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1416 LKSNNTNMETDLTRLKNRLKSAEDALKELKNSlshAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTND 1495
Cdd:PHA02562 179 LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKK---NGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSA 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1496 KLITSDTERNALRNELQKLSQELKF------------GNEQIQRKSDEYQTTIDDLAHSHRVSEDsrlnALQELEARKYE 1563
Cdd:PHA02562 256 ALNKLNTAAAKIKSKIEQFQKVIKMyekggvcptctqQISEGPDRITKIKDKLKELQHSLEKLDT----AIDELEEIMDE 331
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1767287505 1564 INDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSS 1605
Cdd:PHA02562 332 FNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAE 373
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
315-425 |
8.00e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.65 E-value: 8.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 315 NANYEMIARLDEERRRSDEYRMQWENERQKSLSL--EDENDRLRREFERYANDSKDKEKTFINReRNLAQYLSDEQRKML 392
Cdd:pfam17380 431 EARQREVRRLEEERAREMERVRLEEQERQQQVERlrQQEEERKRKKLELEKEKRDRKRAEEQRR-KILEKELEERKQAMI 509
|
90 100 110
....*....|....*....|....*....|...
gi 1767287505 393 DLWTELQRVRKQFSDLKTHTEEDLDKQKAEFTR 425
Cdd:pfam17380 510 EEERKRKLLEKEMEERQKAIYEEERRREAEEER 542
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
1133-1318 |
8.46e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 41.21 E-value: 8.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1133 NILDRY-HDDELVEhKIREVNDRW---KRELERLENEKDDLERRIRELEDELSQIGRGNDKtENDITELKRKHA--AEID 1206
Cdd:COG0497 145 ELLDAFaGLEELLE-EYREAYRAWralKKELEELRADEAERARELDLLRFQLEELEAAALQ-PGEEEELEEERRrlSNAE 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1207 KLKSDISALHD-----------------KHLSDLDDEKEQYGKAVENLKS-------VEDDLRDKLNNLE---KQLADSL 1259
Cdd:COG0497 223 KLREALQEALEalsggeggaldllgqalRALERLAEYDPSLAELAERLESalieleeAASELRRYLDSLEfdpERLEEVE 302
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287505 1260 NRENELEREKRDYDEKINSLYGQNQKIKDEWDDFrNDADKEIQKWKTDAYTVRSEAKAL 1318
Cdd:COG0497 303 ERLALLRRLARKYGVTVEELLAYAEELRAELAEL-ENSDERLEELEAELAEAEAELLEA 360
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1980-2192 |
8.86e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 8.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1980 NNRKQQLENELLNVRSEVRDYKQRVHDVN---------NRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLR 2050
Cdd:COG3206 181 EEQLPELRKELEEAEAALEEFRQKNGLVDlseeaklllQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 2051 QqletaknekrvaTKELEDLKRRLAQLENERrnsSQLSDGWKKEK---ITLLKKIE----LLENEKRRTDAAIRETALQR 2123
Cdd:COG3206 261 Q------------SPVIQQLRAQLAELEAEL---AELSARYTPNHpdvIALRAQIAalraQLQQEAQRILASLEAELEAL 325
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287505 2124 EAIEKSLNAMERENKELYKNCAQLQQQIAQ--LEMENGNRILELTNKQREEQErqlIRMRQEKGQIeKVIE 2192
Cdd:COG3206 326 QAREASLQAQLAQLEARLAELPELEAELRRleREVEVARELYESLLQRLEEAR---LAEALTVGNV-RVID 392
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
1388-1588 |
9.13e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 41.21 E-value: 9.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1388 LEDQHSTLQSDANKWRgELDAALREndiLKSNNTNMETDLTRLK---NRLKSA------EDALKELKNSLSHAKTEKERL 1458
Cdd:COG0497 153 LEELLEEYREAYRAWR-ALKKELEE---LRADEAERARELDLLRfqlEELEAAalqpgeEEELEEERRRLSNAEKLREAL 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287505 1459 QNAFR----EKTKQADHLNQLASQFDtKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKsDEYQT 1534
Cdd:COG0497 229 QEALEalsgGEGGALDLLGQALRALE-RLAEYDPSLAELAERLESALIELEEAASELRRYLDSLEFDPERLEEV-EERLA 306
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1767287505 1535 TIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKA 1588
Cdd:COG0497 307 LLRRLARKYGVTVEELLAYAEELRAELAELENSDERLEELEAELAEAEAELLEA 360
|
|
| |
