|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
261-959 |
6.23e-21 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 100.60 E-value: 6.23e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 261 QQLITVDNDDSVDPRIREMEQRIQKTEEEWTNRINESDQQHAINLATTKAEMHAALENKDSEIEQWRRKCAtlEQQDADA 340
Cdd:PTZ00121 1030 EELTEYGNNDDVLKEKDIIDEDIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKA--EEAKKTE 1107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 341 NQRWSDKVEKVQAMNKALESEKNEMIEKLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTykvql 420
Cdd:PTZ00121 1108 TGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAAR----- 1182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 421 EAKESREFDEEREDVEALKLElnavKSTRDDLESRITENSSSFENYRSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFE 500
Cdd:PTZ00121 1183 KAEEVRKAEELRKAEDARKAE----AARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFE 1258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 501 QADKEKNEMVQqlSRLQQEMLEKCDalqaEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAfenekeqE 580
Cdd:PTZ00121 1259 EARMAHFARRQ--AAIKAEEARKAD----ELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKA-------E 1325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 581 REEQLAKAMEKLNSEQNILDEVTKKLEQseeevlAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETS--LKEF 658
Cdd:PTZ00121 1326 EAKKKADAAKKKAEEAKKAAEAAKAEAE------AAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAdeAKKK 1399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 659 SDMIEAMKIQLINCEKQKDEAVElLKQKLEEVEKNMsdvEVQKQLLLESTTSEMKQHAE---AAEIVKKQLEEAQSSIEN 735
Cdd:PTZ00121 1400 AEEDKKKADELKKAAAAKKKADE-AKKKAEEKKKAD---EAKKKAEEAKKADEAKKKAEeakKAEEAKKKAEEAKKADEA 1475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 736 LKKDAENERNLKTALESDESSAISEITKQMEAAKKelEASEKEKSELREQMDRLQKVHNAGQED----IQKLQKTWELEM 811
Cdd:PTZ00121 1476 KKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKK--KADEAKKAEEAKKADEAKKAEEAKKADeakkAEEKKKADELKK 1553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 812 AKIAKSTEDEKLArEQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKAD 891
Cdd:PTZ00121 1554 AEELKKAEEKKKA-EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEK 1632
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572047519 892 KIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETeilKQKLETLDKELQARQQTEKALTEE 959
Cdd:PTZ00121 1633 KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEED---KKKAEEAKKAEEDEKKAAEALKKE 1697
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
861-1426 |
3.98e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 94.23 E-value: 3.98e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 861 EKEVKVLKEQLERAQSALE---SSQELASSQKADKIQELEKELQNAQkrssEELETANEMVRSLTATLENSNSETEILKQ 937
Cdd:COG1196 199 ERQLEPLERQAEKAERYRElkeELKELEAELLLLKLRELEAELEELE----AELEELEAELEELEAELAELEAELEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 938 KLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALR 1017
Cdd:COG1196 275 ELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1018 AEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLG--VEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKL 1095
Cdd:COG1196 355 EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRaaAELAAQLEELEEAEEALLERLERLEEELEELEEALAELE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1096 QEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMvkVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEK 1175
Cdd:COG1196 435 EEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAAL--AELLEELAEAAARLLLLLEAEADYEGFLEGVKA 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1176 AKMQNSSKREQKV-----------------RELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEKTKMDFG 1238
Cdd:COG1196 513 ALLLAGLRGLAGAvavligveaayeaaleaALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAAL 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1239 ELETREKRATADRENEKMEEIRLREtfakELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASES 1318
Cdd:COG1196 593 ARGAIGAAVDLVASDLREADARYYV----LGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRR 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1319 RFKTLEASAEQAKLESEQKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLT 1398
Cdd:COG1196 669 ELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL 748
|
570 580
....*....|....*....|....*...
gi 1572047519 1399 AANETKAVKADTDARKVVRELQKEVKQL 1426
Cdd:COG1196 749 EEEALEELPEPPDLEELERELERLEREI 776
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
646-1489 |
7.30e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.58 E-value: 7.30e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 646 KKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEveknmsdvevqKQLLLESTTSEMKQHAEAAEIVKKQ 725
Cdd:TIGR02168 179 RKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAEL-----------RELELALLVLRLEELREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 726 LEEAQSSIENLKKDAENERNLKTALESDESSA---ISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQK 802
Cdd:TIGR02168 248 LKEAEEELEELTAELQELEEKLEELRLEVSELeeeIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 803 LQKTWELEMAKIAKSTEDEKLAREQLAG------ELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQS 876
Cdd:TIGR02168 328 LESKLDELAEELAELEEKLEELKEELESleaeleELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEA 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 877 ALESSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKAL 956
Cdd:TIGR02168 408 RLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 957 TEEINVLTTSLAEKEQQTAQIQNLqtqiyqmevekeekvelvkvqlqQAAQSSSSAEEALRAEIEQLEAKL-KAVEQAKA 1035
Cdd:TIGR02168 488 QARLDSLERLQENLEGFSEGVKAL-----------------------LKNQSGLSGILGVLSELISVDEGYeAAIEAALG 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1036 EALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEK---LEAKLQEIEEEKKNALNASLAe 1112
Cdd:TIGR02168 545 GRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGflgVAKDLVKFDPKLRKALSYLLG- 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1113 keqQTAQIQELQAQLHQLEVEKEEKLEMVK---------VQLQQAAQSSSSVeQALRAEIEKLEAKLQEIEkakmqnssk 1183
Cdd:TIGR02168 624 ---GVLVVDDLDNALELAKKLRPGYRIVTLdgdlvrpggVITGGSAKTNSSI-LERRREIEELEEKIEELE--------- 690
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1184 reQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEKTKMDFGELETREKRATADREnEKMEEIRLRE 1263
Cdd:TIGR02168 691 --EKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELT-ELEAEIEELE 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1264 TFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLE-----ASAEQAKLESEQKL 1338
Cdd:TIGR02168 768 ERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESlerriAATERRLEDLEEQI 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1339 RALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLtaanETKAVKADTDArkvvRE 1418
Cdd:TIGR02168 848 EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL----ESKRSELRREL----EE 919
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1572047519 1419 LQKEVKQLYNELNDKNQQFDMVQEELtrlktsketAENGQ--LQVQKQMDEEDRRSEFSFKEEIASLKQKLDA 1489
Cdd:TIGR02168 920 LREKLAQLELRLEGLEVRIDNLQERL---------SEEYSltLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
160-958 |
9.73e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.20 E-value: 9.73e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 160 SRLKQRLATYKAKYRDAvhRHNKLVDDVNTTRKLLETTQDECLQKVEKLRLEKRILAEKLSNSAGNGDGKEELEKKCEDY 239
Cdd:TIGR02168 209 AEKAERYKELKAELREL--ELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 240 KRMLEQCKIKIKSLQQDKKEQQQLI--TVDNDDSVDPRIREMEQRIQKTEEE---WTNRINESDQQHA------INLATT 308
Cdd:TIGR02168 287 QKELYALANEISRLEQQKQILRERLanLERQLEELEAQLEELESKLDELAEElaeLEEKLEELKEELEsleaelEELEAE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 309 KAEMHAALENKDSEIEQWRRKCATLEQQDADAN---QRWSDKVEKVQAMNKALESEKNEMIEKLSEAKAQGVKAVLEEEE 385
Cdd:TIGR02168 367 LEELESRLEELEEQLETLRSKVAQLELQIASLNneiERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 386 RKRTEMETDLNDEIERLK---EETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKL-----ELNAVKSTRDDLESRIT 457
Cdd:TIGR02168 447 EELEELQEELERLEEALEelrEELEEAEQALDAAERELAQLQARLDSLERLQENLEGFsegvkALLKNQSGLSGILGVLS 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 458 ENSSSFENYRSEAEKTLA------------AAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEM----- 520
Cdd:TIGR02168 527 ELISVDEGYEAAIEAALGgrlqavvvenlnAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLgvakd 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 521 LEKCD-----ALQA---------EVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFenekeqereeqla 586
Cdd:TIGR02168 607 LVKFDpklrkALSYllggvlvvdDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSIL------------- 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 587 kameklnSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMK 666
Cdd:TIGR02168 674 -------ERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLE 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 667 IQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQlLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNL 746
Cdd:TIGR02168 747 ERIAQLSKELTELEAEIEELEERLEEAEEELAEAEA-EIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER 825
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 747 KTALEsdessaiseitKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLARE 826
Cdd:TIGR02168 826 LESLE-----------RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRS 894
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 827 qlagELENAKEDLKVVEEEKhtgiQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQ---KADKIQELEKELQNA 903
Cdd:TIGR02168 895 ----ELEELSEELRELESKR----SELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEyslTLEEAEALENKIEDD 966
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 1572047519 904 QKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKE----LQARQQTEKALTE 958
Cdd:TIGR02168 967 EEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQkedlTEAKETLEEAIEE 1025
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
365-1173 |
5.16e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.89 E-value: 5.16e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 365 MIEKLSEAKAQGVKAVLEE--------EERKRTEMETDLNDE-IERLKEETEKMRLEMSTYKVQLE-AKESREFDEERED 434
Cdd:TIGR02168 145 KISEIIEAKPEERRAIFEEaagiskykERRKETERKLERTREnLDRLEDILNELERQLKSLERQAEkAERYKELKAELRE 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 435 VEA--LKLELNAVKSTRDDLESRITENSSSFENYRSEAEKTLAAAkAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQ 512
Cdd:TIGR02168 225 LELalLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKL-EELRLEVSELEEEIEELQKELYALANEISRLEQQ 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 513 LSRLQQEMlekcDALQAEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFenekeQEREEQLAKAMEKL 592
Cdd:TIGR02168 304 KQILRERL----ANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEL-----EELEAELEELESRL 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 593 NSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSEtsLKEFSDMIEAMKIQLINC 672
Cdd:TIGR02168 375 EELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAE--LKELQAELEELEEELEEL 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 673 EKQKDEAVELLKQKLEEVEKNMSDV------EVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQ-------SSIENLKKD 739
Cdd:TIGR02168 453 QEELERLEEALEELREELEEAEQALdaaereLAQLQARLDSLERLQENLEGFSEGVKALLKNQSglsgilgVLSELISVD 532
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 740 AENERNLKTALESDESSAISEitkQMEAAKKELEASEKEKS------ELREQMDRLQKVHNAGQEDIQKLQKTWELEMAK 813
Cdd:TIGR02168 533 EGYEAAIEAALGGRLQAVVVE---NLNAAKKAIAFLKQNELgrvtflPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVK 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 814 IAKSTE---DEKLAREQLAGELENAKEDLKVV-----------------------EEEKHTGIQRAQGALDDAEKEVKVL 867
Cdd:TIGR02168 610 FDPKLRkalSYLLGGVLVVDDLDNALELAKKLrpgyrivtldgdlvrpggvitggSAKTNSSILERRREIEELEEKIEEL 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 868 KEQ---LERAQSALESSQELASSQKADKIQELE------KELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQK 938
Cdd:TIGR02168 690 EEKiaeLEKALAELRKELEELEEELEQLRKELEelsrqiSALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEER 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 939 LETLDKELQARQQTEKALTEEINVLttsLAEKEQQTAQIQNLQTQiYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRA 1018
Cdd:TIGR02168 770 LEEAEEELAEAEAEIEELEAQIEQL---KEELKALREALDELRAE-LTLLNEEAANLRERLESLERRIAATERRLEDLEE 845
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1019 EIEQLEAKLKAVEqakaEALNSLLAEKEHLQAQLHQLGVEKEeklemvkvQLQQAAQSSSSVEQALRAEIEKLEAKLQEI 1098
Cdd:TIGR02168 846 QIEELSEDIESLA----AEIEELEELIEELESELEALLNERA--------SLEEALALLRSELEELSEELRELESKRSEL 913
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 1099 EEEKKnALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSssvEQALRAEIEKLEAKLQEI 1173
Cdd:TIGR02168 914 RRELE-ELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDD---EEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
393-1128 |
1.82e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.96 E-value: 1.82e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 393 TDLNDEIERLKEETEKMRLEMSTYKVQLEAKESR------EFDEEREDVEALKLELNAVKSTRDDLESRITENSSSFENY 466
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKleelrlEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 467 RSEAEKtLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEkcdaLQAEVNEAKALREEIQAKYD 546
Cdd:TIGR02168 315 ERQLEE-LEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEE----LESRLEELEEQLETLRSKVA 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 547 DVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEK 626
Cdd:TIGR02168 390 QLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREE 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 627 LEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKiQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLE 706
Cdd:TIGR02168 470 LEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVK-ALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQ 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 707 STTSEMKQHAEAA--EIVKKQLEEAQSSIENLKKDAENERNLKTALESDES--SAISEITKQMEAAKKELEA-------- 774
Cdd:TIGR02168 549 AVVVENLNAAKKAiaFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGflGVAKDLVKFDPKLRKALSYllggvlvv 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 775 -SEKEKSELREQMDRLQKV-----------------HNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAG------ 830
Cdd:TIGR02168 629 dDLDNALELAKKLRPGYRIvtldgdlvrpggvitggSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAElrkele 708
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 831 ELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQkADKIQELEKELqnaqKRSSEE 910
Cdd:TIGR02168 709 ELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL-EERLEEAEEEL----AEAEAE 783
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 911 LETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSL----AEKEQQTAQIQNLQTQIYQ 986
Cdd:TIGR02168 784 IEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLedleEQIEELSEDIESLAAEIEE 863
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 987 MeVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEA---LNSLLAEKEHLQAQLHQLGVEKEEKL 1063
Cdd:TIGR02168 864 L-EELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELrreLEELREKLAQLELRLEGLEVRIDNLQ 942
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572047519 1064 EMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALN---ASLAEKEQQTAQIQELQAQLH 1128
Cdd:TIGR02168 943 ERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPvnlAAIEEYEELKERYDFLTAQKE 1010
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
758-1397 |
2.49e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 88.46 E-value: 2.49e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 758 ISEITKQMEAAKKELEASEKEKsELREQMDRLQKVHNAGQedIQKLQKTWELEMAKIAKSTEDEKLAREQLAgELENAKE 837
Cdd:COG1196 195 LGELERQLEPLERQAEKAERYR-ELKEELKELEAELLLLK--LRELEAELEELEAELEELEAELEELEAELA-ELEAELE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 838 DLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQElASSQKADKIQELEKELQNAQKRSSE---ELETA 914
Cdd:COG1196 271 ELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE-RLEELEEELAELEEELEELEEELEEleeELEEA 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 915 NEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEK 994
Cdd:COG1196 350 EEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 995 VELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALnSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAA 1074
Cdd:COG1196 430 LAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA-LLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1075 QSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSS 1154
Cdd:COG1196 509 GVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAAL 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1155 VEQALRAEIEKLEAKLQeiekakmqnsSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEKTK 1234
Cdd:COG1196 589 AAALARGAIGAAVDLVA----------SDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSA 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1235 MDFGELETREKRATADRENEKMEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDE 1314
Cdd:COG1196 659 GGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELL 738
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1315 ASESRFKTLEASAEQAKLESEQKLRALEELLKSSESEIEEL-KI--------KEISAEKDrsHWEVEKEMLEGEAKELTD 1385
Cdd:COG1196 739 EELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALgPVnllaieeyEELEERYD--FLSEQREDLEEARETLEE 816
|
650
....*....|..
gi 1572047519 1386 RIEGLEAEVKKL 1397
Cdd:COG1196 817 AIEEIDRETRER 828
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
364-1122 |
4.65e-17 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 87.89 E-value: 4.65e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 364 EMIEKLSEAKAQgvKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKLELN 443
Cdd:PTZ00121 1027 EKIEELTEYGNN--DDVLKEKDIIDEDIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAK 1104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 444 AVKSTRDDLESRITENSSSFENYRSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEK 523
Cdd:PTZ00121 1105 KTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKA 1184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 524 CDALQAE-------------------VNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLE----------------- 567
Cdd:PTZ00121 1185 EEVRKAEelrkaedarkaeaarkaeeERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEernneeirkfeearmah 1264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 568 -SEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAiQELTEKLEESEKETSTAKTELEAVSK 646
Cdd:PTZ00121 1265 fARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKA-DEAKKKAEEAKKKADAAKKKAEEAKK 1343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 647 KLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAvellKQKLEEVEKNMSdvEVQKQLLLESTTSEMKQHAE---AAEIVK 723
Cdd:PTZ00121 1344 AAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA----KKKADAAKKKAE--EKKKADEAKKKAEEDKKKADelkKAAAAK 1417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 724 KQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASE-----KEKSELREQMDRLQKVHNAGQE 798
Cdd:PTZ00121 1418 KKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKkadeaKKKAEEAKKADEAKKKAEEAKK 1497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 799 DIQKLQKTWEL-EMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAE--KEVKVLKEQLERAQ 875
Cdd:PTZ00121 1498 KADEAKKAAEAkKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEekKKAEEAKKAEEDKN 1577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 876 SALESSQELASSQKAdKIQELEKELQNAQKRSSEELETANEmVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKA 955
Cdd:PTZ00121 1578 MALRKAEEAKKAEEA-RIEEVMKLYEEEKKMKAEEAKKAEE-AKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKA 1655
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 956 lTEEINVLTTSLAEKEQQTAQIQNlqtqiyqmEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEqlEAKLKAVEQAKA 1035
Cdd:PTZ00121 1656 -EEENKIKAAEEAKKAEEDKKKAE--------EAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEA--EEKKKAEELKKA 1724
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1036 EALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEK-LEAKLQEIEEEKKNALNASLAEKE 1114
Cdd:PTZ00121 1725 EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAvIEEELDEEDEKRRMEVDKKIKDIF 1804
|
....*...
gi 1572047519 1115 QQTAQIQE 1122
Cdd:PTZ00121 1805 DNFANIIE 1812
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
550-1175 |
1.88e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.76 E-value: 1.88e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 550 QKAERIQgELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEqniLDEVTKKLEQSEEEVLAARGAIQELTEKLEE 629
Cdd:COG1196 210 EKAERYR-ELKEELKELEAELLLLKLRELEAELEELEAELEELEAE---LEELEAELAELEAELEELRLELEELELELEE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 630 SEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEknmsdvevqkqlllestt 709
Cdd:COG1196 286 AQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE------------------ 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 710 sEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRL 789
Cdd:COG1196 348 -EAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 790 QkvhnagQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLagELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKE 869
Cdd:COG1196 427 E------EALAELEEEEEEEEEALEEAAEEEAELEEEEE--ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 870 QLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETAnemvrsLTATLENSNSETEILKQKLETLDKELQAR 949
Cdd:COG1196 499 AEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAA------LAAALQNIVVEDDEVAAAAIEYLKAAKAG 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 950 QQTEKALTEEINVLTTSLAEKEQQTAQIQNLqtqiYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKA 1029
Cdd:COG1196 573 RATFLPLDKIRARAALAAALARGAIGAAVDL----VASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLRE 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1030 VEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNAS 1109
Cdd:COG1196 649 VTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEE 728
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572047519 1110 LAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVkvqlqqaaqssssVEQALRAEIEKLEAKLQEIEK 1175
Cdd:COG1196 729 QLEAEREELLEELLEEEELLEEEALEELPEPP-------------DLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
467-1127 |
3.69e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.52 E-value: 3.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 467 RSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMlekcDALQAEVNEAKALREEIQAKYD 546
Cdd:COG1196 195 LGELERQLEPLERQAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAEL----EELEAELEELEAELAELEAELE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 547 DVTQKAERIQGELEEskkvlesekqafenekeqeREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEK 626
Cdd:COG1196 271 ELRLELEELELELEE-------------------AQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEE 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 627 LEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEknmsdVEVQKQLLLE 706
Cdd:COG1196 332 LEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA-----ELAAQLEELE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 707 STTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQM 786
Cdd:COG1196 407 EAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 787 DRLQKVHNAGQEDIQKLQKtwELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALD-DAEKEVK 865
Cdd:COG1196 487 AEAAARLLLLLEAEADYEG--FLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDeVAAAAIE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 866 VLKEQLERAQSALESSQELASSQKADKIQELEKELqnAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKE 945
Cdd:COG1196 565 YLKAAKAGRATFLPLDKIRARAALAAALARGAIGA--AVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTL 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 946 LQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEA 1025
Cdd:COG1196 643 AGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1026 KLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEmvkvqlqqaaqssssvEQALRAEIEKLEAKLQEIEeekknA 1105
Cdd:COG1196 723 EEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPD----------------LEELERELERLEREIEALG-----P 781
|
650 660
....*....|....*....|...
gi 1572047519 1106 LN-ASLAEKEQQTAQIQELQAQL 1127
Cdd:COG1196 782 VNlLAIEEYEELEERYDFLSEQR 804
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
850-1507 |
1.66e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 79.33 E-value: 1.66e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 850 IQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEkELQNAQKRSSEELETANEMVRSLTATLENSN 929
Cdd:TIGR02168 188 LDRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLE-ELREELEELQEELKEAEEELEELTAELQELE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 930 SETEILKQKLETLDKELQARQQTEKALTEEINVLTtslAEKEQQTAQIQNLQTQIyQMEVEKEEKVELVKVQLQQAAQSS 1009
Cdd:TIGR02168 267 EKLEELRLEVSELEEEIEELQKELYALANEISRLE---QQKQILRERLANLERQL-EELEAQLEELESKLDELAEELAEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1010 SSAEEALRAEIEQLEAKLKAvEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIE 1089
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEE-LEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQ 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1090 KLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEmvkvQLQQAAQSSSSVEQALRAEIEKLEAK 1169
Cdd:TIGR02168 422 EIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELE----EAEQALDAAERELAQLQARLDSLERL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1170 LQEIE---KAKMQNSSKREQKVRELSNLNEKMRVEfiakEKIISDLRSELSTISTELVVQKATVEKTKMDFGElETREKR 1246
Cdd:TIGR02168 498 QENLEgfsEGVKALLKNQSGLSGILGVLSELISVD----EGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLK-QNELGR 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1247 AT---ADRENEKMEEIRLRETFAKELETMGSALEVKETAynelkASAEKKIAKLTSQFE--EKLKKAQNSQDE-ASESRF 1320
Cdd:TIGR02168 573 VTflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFD-----PKLRKALSYLLGGVLvvDDLDNALELAKKlRPGYRI 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1321 KTLE--------------ASAEQAKLESEQKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDR 1386
Cdd:TIGR02168 648 VTLDgdlvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQ 727
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1387 IEGLEAEVKKLTAANETKAVKADtDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENgQLQVQKQMD 1466
Cdd:TIGR02168 728 ISALRKDLARLEAEVEQLEERIA-QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKE-ELKALREAL 805
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1572047519 1467 EEDRRSEFSFKEEIASLKQKLDASLTEADDLRMQVSRNEKT 1507
Cdd:TIGR02168 806 DELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQ 846
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
343-926 |
1.99e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 79.41 E-value: 1.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 343 RWSDKVEKVQAMNKALESEKNEMIEKLSEAK-AQGVKAVLE----EEERKRTEMETDlNDEIERLKEETEKMRLEMSTYK 417
Cdd:PTZ00121 1194 RKAEDARKAEAARKAEEERKAEEARKAEDAKkAEAVKKAEEakkdAEEAKKAEEERN-NEEIRKFEEARMAHFARRQAAI 1272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 418 VQLEAKESREFDEEREDVEALKLELNAVKSTRDDLESRITENSSSFENYRSEAE---KTLAAAKAQFEAEKKALAEKCEE 494
Cdd:PTZ00121 1273 KAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEakkKADAAKKKAEEAKKAAEAAKAEA 1352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 495 LTLKFEQADKEKNEMVQQLSRlqQEMLEKCDALQAEVNEAKAlREEIQAKYDDVTQKAERIQGELEESKKVLESEKQA-- 572
Cdd:PTZ00121 1353 EAAADEAEAAEEKAEAAEKKK--EEAKKKADAAKKKAEEKKK-ADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAee 1429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 573 ---FENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAiqELTEKLEESEKETSTAKTELEAVSKKLD 649
Cdd:PTZ00121 1430 kkkADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKA--EEAKKADEAKKKAEEAKKKADEAKKAAE 1507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 650 SSETSlKEFSDMIEAMKIQLINCEKQKDEAVELlkQKLEEVEKNMsdvEVQKQllLESTTSEMKQHAEAAEIVKKQLEEA 729
Cdd:PTZ00121 1508 AKKKA-DEAKKAEEAKKADEAKKAEEAKKADEA--KKAEEKKKAD---ELKKA--EELKKAEEKKKAEEAKKAEEDKNMA 1579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 730 QSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELR--EQMDRLQKVHNAGQEDIQKLQKTW 807
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKkvEQLKKKEAEEKKKAEELKKAEEEN 1659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 808 ELEMAKIAKSTEDEKLAREQLAGELENAK---EDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQEL 884
Cdd:PTZ00121 1660 KIKAAEEAKKAEEDKKKAEEAKKAEEDEKkaaEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEA 1739
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 1572047519 885 ASSQ-KADKIQELEKELQNAQKRSSEELETANEMVRSLTATLE 926
Cdd:PTZ00121 1740 EEDKkKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIE 1782
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
808-1511 |
1.08e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 76.72 E-value: 1.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 808 ELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEE----EKHTGIQRAQGALDDAEKEVKVLKEQLERAQSA--LESS 881
Cdd:PTZ00121 1096 AFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEarkaEDARKAEEARKAEDAKRVEIARKAEDARKAEEArkAEDA 1175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 882 QELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEIn 961
Cdd:PTZ00121 1176 KKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEI- 1254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 962 vlttslaEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEieqlEAKLKAVEQAKAEALNSL 1041
Cdd:PTZ00121 1255 -------RKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKAD----EAKKKAEEAKKADEAKKK 1323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1042 LAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQ 1121
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED 1403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1122 ELQAQLHQLEVEKEEKLEMVKV---QLQQAAQSSSSVEQALRAEieklEAKLQEIEKAKMQNSSKREQKVRELSNLNEKM 1198
Cdd:PTZ00121 1404 KKKADELKKAAAAKKKADEAKKkaeEKKKADEAKKKAEEAKKAD----EAKKKAEEAKKAEEAKKKAEEAKKADEAKKKA 1479
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1199 RVEFIAKEkiISDLRSELSTISTELvvQKATVEKTKMDfgELETREKRATADrENEKMEEIRLRETfAKELETMGSALEV 1278
Cdd:PTZ00121 1480 EEAKKADE--AKKKAEEAKKKADEA--KKAAEAKKKAD--EAKKAEEAKKAD-EAKKAEEAKKADE-AKKAEEKKKADEL 1551
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1279 KETayNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEA-----------SAEQAKLESEQKLRAlEELLKS 1347
Cdd:PTZ00121 1552 KKA--EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEvmklyeeekkmKAEEAKKAEEAKIKA-EELKKA 1628
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1348 SESEIEELKIKEISAEKDRSHWEVEKEMLEGEAK--ELTDRIEGLEAEVKKLTAANETKAVKADTDARKV-----VRELQ 1420
Cdd:PTZ00121 1629 EEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKaaEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAeeakkAEELK 1708
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1421 K----------EVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQLQVQKQMDEEDRRSEFSFKEEIASLKQKLDas 1490
Cdd:PTZ00121 1709 KkeaeekkkaeELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELD-- 1786
|
730 740
....*....|....*....|.
gi 1572047519 1491 lTEADDLRMQVSRNEKTPRSN 1511
Cdd:PTZ00121 1787 -EEDEKRRMEVDKKIKDIFDN 1806
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
479-1197 |
1.31e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 76.26 E-value: 1.31e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 479 AQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEM--LEKCDALQAEVNEAKAlrEEIQAKYDDVTQKAERIQ 556
Cdd:TIGR02169 166 AEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRERekAERYQALLKEKREYEG--YELLKEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 557 GELEESKKVLES-----EKQAFENEKEQEREEQLAKAMEKLNSEQNIldEVTKKLEQSEEEVLAARGAIQELTEKLEESE 631
Cdd:TIGR02169 244 RQLASLEEELEKlteeiSELEKRLEEIEQLLEELNKKIKDLGEEEQL--RVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 632 KETSTAKTELEAVSKKLDSSETSLKEFsdmiEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMS---DVEVQKQLLLEST 708
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELEREIEEE----RKRRDKLTEEYAELKEELEDLRAELEEVDKEFAetrDELKDYREKLEKL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 709 TSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQ---MEAAKKELEASEKEKSELREQ 785
Cdd:TIGR02169 398 KREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQewkLEQLAADLSKYEQELYDLKEE 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 786 MDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKeDLKVVEEEKHTGIQRAQGAL-------- 857
Cdd:TIGR02169 478 YDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVA-QLGSVGERYATAIEVAAGNRlnnvvved 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 858 -DDAEKEVKVLKE------------QLERAQSALESSQELASSQKADKIQELEKELQNAQK---RSS---EELETANE-- 916
Cdd:TIGR02169 557 dAVAKEAIELLKRrkagratflplnKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKyvfGDTlvvEDIEAARRlm 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 917 ----MVRSLTATLENSNSET--------------------EILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQ 972
Cdd:TIGR02169 637 gkyrMVTLEGELFEKSGAMTggsraprggilfsrsepaelQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASR 716
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 973 QTAQIQNLQTQIYQmevekeekvelVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVE---QAKAEALNSLLAEKEHLQ 1049
Cdd:TIGR02169 717 KIGEIEKEIEQLEQ-----------EEEKLKERLEELEEDLSSLEQEIENVKSELKELEariEELEEDLHKLEEALNDLE 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1050 AQLHQLGV-EKEEKLEMVKVQLQQAAQSSSSVEQALraeiEKLEAKLQEIEEEKKNALNaslaEKEQQTAQIQELQAQLH 1128
Cdd:TIGR02169 786 ARLSHSRIpEIQAELSKLEEEVSRIEARLREIEQKL----NRLTLEKEYLEKEIQELQE----QRIDLKEQIKSIEKEIE 857
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572047519 1129 QLEVEKEEKLEMVKvQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEK 1197
Cdd:TIGR02169 858 NLNGKKEELEEELE-ELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAK 925
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
585-1475 |
2.76e-13 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 75.39 E-value: 2.76e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 585 LAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEA 664
Cdd:pfam02463 175 LKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 665 MKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENER 744
Cdd:pfam02463 255 SSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEK 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 745 NLKTALESDESSAiseiTKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIaksteDEKLA 824
Cdd:pfam02463 335 EEIEELEKELKEL----EIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELK-----SEEEK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 825 REQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQ 904
Cdd:pfam02463 406 EAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQ 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 905 KRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQI 984
Cdd:pfam02463 486 LELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 985 YQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLE 1064
Cdd:pfam02463 566 LVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKE 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1065 MvkvqlqqaaqSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQ 1144
Cdd:pfam02463 646 S----------GLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKL 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1145 LQQAAQSSSSVEQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELV 1224
Cdd:pfam02463 716 KLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEK 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1225 VQKATVEKTKMDFGELETREKRATADRENEKMEEIRLRETFAKELEtmgSALEVKETAYNELKASAEKKIAKLTSQFEEK 1304
Cdd:pfam02463 796 LKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALE---LKEEQKLEKLAEEELERLEEEITKEELLQEL 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1305 LKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELT 1384
Cdd:pfam02463 873 LLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEE 952
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1385 DRIEGLEAEVKKLTAANEtKAVKADTDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQLQVQKQ 1464
Cdd:pfam02463 953 NNKEEEEERNKRLLLAKE-ELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKEFLELFVSINK 1031
|
890
....*....|.
gi 1572047519 1465 MDEEDRRSEFS 1475
Cdd:pfam02463 1032 GWNKVFFYLEL 1042
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
361-953 |
8.68e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 73.56 E-value: 8.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 361 EKNEMIEKLSEAKAQgVKAVLEEEERKRTEMETDLN---DEIERLKEETEKMRlemstykvqleaKESREFDEEREDVEA 437
Cdd:PRK03918 176 RRIERLEKFIKRTEN-IEELIKEKEKELEEVLREINeisSELPELREELEKLE------------KEVKELEELKEEIEE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 438 LKLELNAVKSTRDDLESRITENSSSFENYRSEAEKTLAAAKAQFEAEKKalAEKCEELTLKFEQADKEKNEMVQQLSRLQ 517
Cdd:PRK03918 243 LEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEK--AEEYIKLSEFYEEYLDELREIEKRLSRLE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 518 QEmlekcdalqaevneakalREEIQAKYDDVTQKAERIqGELEESKKVLESEKQAFENEKEQ-EREEQLAKAMEKLNSEQ 596
Cdd:PRK03918 321 EE------------------INGIEERIKELEEKEERL-EELKKKLKELEKRLEELEERHELyEEAKAKKEELERLKKRL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 597 NIL--DEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKK-----LDSSETSLKEFSDMIEAMKIQL 669
Cdd:PRK03918 382 TGLtpEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAkgkcpVCGRELTEEHRKELLEEYTAEL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 670 INCEKQKDEAVELLKQKLEEVeknmsdVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAqsSIENLKKDAENERNLKTA 749
Cdd:PRK03918 462 KRIEKELKEIEEKERKLRKEL------RELEKVLKKESELIKLKELAEQLKELEEKLKKY--NLEELEKKAEEYEKLKEK 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 750 LE--SDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQK-VHNAGQEDIQKLQKTWElemakiakstEDEKLARE 826
Cdd:PRK03918 534 LIklKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKeLEELGFESVEELEERLK----------ELEPFYNE 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 827 QLagELENAKEDLKVVEEEkhtgIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKR 906
Cdd:PRK03918 604 YL--ELKDAEKELEREEKE----LKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAG 677
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 1572047519 907 SSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTE 953
Cdd:PRK03918 678 LRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVE 724
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
251-840 |
9.13e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.43 E-value: 9.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 251 KSLQQDKKEQQQLITVDNDDSVDPRIREMEQRIQKTEEEwtnrinesdqqhainlattKAEMHAALENKDSEIEQWRRKC 330
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAE-------------------LEELEAELAELEAELEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 331 ATLEQQDADANQRWSDKVEKVQAMNKALESEKnEMIEKLSEAKAQgvkavLEEEERKRTEMETDLNDEIERLKEETEKMR 410
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLE-ERRRELEERLEE-----LEEELAELEEELEELEEELEELEEELEEAE 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 411 LEMSTYKVQLEAKESREFDEEREDVEALKLELNAVKSTRDDLESRITENSSsfENYRSEAEKTLAAAKAQFEAEKKALAE 490
Cdd:COG1196 351 EELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ--LEELEEAEEALLERLERLEEELEELEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 491 KCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERiqgeleesKKVLESEK 570
Cdd:COG1196 429 ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR--------LLLLLEAE 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 571 QAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAiQELTEKLEESEKETSTAKTELEA-----VS 645
Cdd:COG1196 501 ADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQ-NIVVEDDEVAAAAIEYLKAAKAGratflPL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 646 KKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIV--- 722
Cdd:COG1196 580 DKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGsag 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 723 KKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQK 802
Cdd:COG1196 660 GSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE 739
|
570 580 590
....*....|....*....|....*....|....*...
gi 1572047519 803 LQKTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLK 840
Cdd:COG1196 740 ELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
372-983 |
1.37e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.05 E-value: 1.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 372 AKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESREfDEEREDVEALKLELNAVKSTRDD 451
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL-ARLEQDIARLEERRRELEERLEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 452 LESRITENSSSFENY---RSEAEKTLAAAKAQFEAEKKALAEKceeltlkfeqadkeknemVQQLSRLQQEMLEKCDALQ 528
Cdd:COG1196 321 LEEELAELEEELEELeeeLEELEEELEEAEEELEEAEAELAEA------------------EEALLEAEAELAEAEEELE 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 529 AEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAfenekeqerEEQLAKAMEKLNSEQNILDEVTKKLEQ 608
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL---------EEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 609 SEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQlincekqkdeAVELLKQKLE 688
Cdd:COG1196 454 LEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAA----------LLLAGLRGLA 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 689 EVEKNMSDVEVQKQLLLESTTSemkqhAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAA 768
Cdd:COG1196 524 GAVAVLIGVEAAYEAALEAALA-----AALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIG 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 769 KKELEASEKEKselreqmDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHT 848
Cdd:COG1196 599 AAVDLVASDLR-------EADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELL 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 849 GIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLENS 928
Cdd:COG1196 672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 929 NSETEILKQKLETLDKELQARQQTEKALtEEINVLttSLAEKEQQTAQIQNLQTQ 983
Cdd:COG1196 752 ALEELPEPPDLEELERELERLEREIEAL-GPVNLL--AIEEYEELEERYDFLSEQ 803
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
230-978 |
2.67e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 72.07 E-value: 2.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 230 EELEKKCEDYKRMLEQCKIKIKSLQQDKKEQQQLITVDNDDSVDPRIREmeqriQKTEEEWTNRInesdQQHAINLATTK 309
Cdd:pfam15921 88 KDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRE-----SQSQEDLRNQL----QNTVHELEAAK 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 310 AEMHAALENKDSEIEQWRRkcaTLEQQDADANQRWSDKVEKVQAMNKALEsEKNEMIEKLSEAKAQGVKAVLEEEERKRT 389
Cdd:pfam15921 159 CLKEDMLEDSNTQIEQLRK---MMLSHEGVLQEIRSILVDFEEASGKKIY-EHDSMSTMHFRSLGSAISKILRELDTEIS 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 390 EMETDL---NDEIERLKEETE-KMRLEMSTYKVQLE---AKESREFDEEREDVEALKLELNAVKSTRDDLESRITENSSS 462
Cdd:pfam15921 235 YLKGRIfpvEDQLEALKSESQnKIELLLQQHQDRIEqliSEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSM 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 463 FENYRSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEmlekcdalqaevneAKALREEIQ 542
Cdd:pfam15921 315 YMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQE--------------SGNLDDQLQ 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 543 AKYDDVTQKAERIQGELEESKKVLESEkqafenEKEQEREEQLAKAMEKLNSEQNILDEVTKKLE-----QSEEEVLAAR 617
Cdd:pfam15921 381 KLLADLHKREKELSLEKEQNKRLWDRD------TGNSITIDHLRRELDDRNMEVQRLEALLKAMKsecqgQMERQMAAIQ 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 618 GA------IQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEamkiqlincekQKDEAVELLKQKLEEVE 691
Cdd:pfam15921 455 GKneslekVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQ-----------EKERAIEATNAEITKLR 523
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 692 KNMsDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLktalesdessaISEITKQMEAAKKE 771
Cdd:pfam15921 524 SRV-DLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQL-----------VGQHGRTAGAMQVE 591
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 772 LEASEKEKSELREQMDRLQKVHNAGQEDIQKLQ-KTWELEMAKIA---------KSTEDEKLAREQLAGELENAKEDLKV 841
Cdd:pfam15921 592 KAQLEKEINDRRLELQEFKILKDKKDAKIRELEaRVSDLELEKVKlvnagserlRAVKDIKQERDQLLNEVKTSRNELNS 671
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 842 VEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSE--ELETANEMVR 919
Cdd:pfam15921 672 LSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKrgQIDALQSKIQ 751
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 1572047519 920 SLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQ 978
Cdd:pfam15921 752 FLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANME 810
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
714-1475 |
3.47e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 72.10 E-value: 3.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 714 QHAEAAEIVKKqLEEAQSSIENLKKdAENERNLKTALESDESSAISEITKQmeaakKELEASEKEKSELREQMDRLQKVh 793
Cdd:PTZ00121 1221 EDAKKAEAVKK-AEEAKKDAEEAKK-AEEERNNEEIRKFEEARMAHFARRQ-----AAIKAEEARKADELKKAEEKKKA- 1292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 794 nagqediQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLER 873
Cdd:PTZ00121 1293 -------DEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK 1365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 874 AQSA-LESSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSltatlENSNSETEILKQKLETLDKELQARQQT 952
Cdd:PTZ00121 1366 AEAAeKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKA-----AAAKKKADEAKKKAEEKKKADEAKKKA 1440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 953 EKALTEEinvlttSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQaaqssssaeealraeieqlEAKLKAvEQ 1032
Cdd:PTZ00121 1441 EEAKKAD------EAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKAD-------------------EAKKKA-EE 1494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1033 AKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKnalnASLAE 1112
Cdd:PTZ00121 1495 AKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKK----AEEAK 1570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1113 KEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSsssvEQALRAEIEKLEAklqeiEKAKMQNSSKREQKVRELS 1192
Cdd:PTZ00121 1571 KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKA----EEAKKAEEAKIKA-----EELKKAEEEKKKVEQLKKK 1641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1193 NLNEKMRVEFIAKEKiisdlrsELSTISTELVVQKATVEKTKMDFGELETREKRATADRENEKMEEIRLRETFAKEletm 1272
Cdd:PTZ00121 1642 EAEEKKKAEELKKAE-------EENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKK---- 1710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1273 gsalevketaynelKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEELLKSSESEI 1352
Cdd:PTZ00121 1711 --------------EAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1353 EELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLTAANET--KAVKADTDARKVVRELQKEVKQLYNEL 1430
Cdd:PTZ00121 1777 KEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMedSAIKEVADSKNMQLEEADAFEKHKFNK 1856
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 1572047519 1431 NDKNQQFDMVQEELTRLKTSKETAENGQLQVQ--KQMDEEDRRSEFS 1475
Cdd:PTZ00121 1857 NNENGEDGNKEADFNKEKDLKEDDEEEIEEADeiEKIDKDDIEREIP 1903
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
376-949 |
1.36e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.68 E-value: 1.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 376 GVKAVLEEEErkrtemETDLNDEIERLKEETEKMRLEMSTYKVQLE-AKESREFDEER-EDVEALKLELNAVKSTRDDLE 453
Cdd:PRK02224 191 QLKAQIEEKE------EKDLHERLNGLESELAELDEEIERYEEQREqARETRDEADEVlEEHEERREELETLEAEIEDLR 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 454 SRITENSSSFENYRSEAEkTLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNE 533
Cdd:PRK02224 265 ETIAETEREREELAEEVR-DLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 534 AKALREEIqakyDDVTQKAERIQGELEESKKVLESEKQAFENEKEQERE--EQLAKAMEKLNSEQNILDEVTKKLEQSEE 611
Cdd:PRK02224 344 AESLREDA----DDLEERAEELREEAAELESELEEAREAVEDRREEIEEleEEIEELRERFGDAPVDLGNAEDFLEELRE 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 612 EVLAARGAIQELTEKLEESEKETSTAKTELEAvsKKLDSSETSLKEFSDMIEAmkiqlinceKQKDEAVELLKQKLEEVE 691
Cdd:PRK02224 420 ERDELREREAELEATLRTARERVEEAEALLEA--GKCPECGQPVEGSPHVETI---------EEDRERVEELEAELEDLE 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 692 KNMSDVE--VQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAK 769
Cdd:PRK02224 489 EEVEEVEerLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAE 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 770 KELEAS---EKEKSELREQMDRLQKVHNAgQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAgelenakedlkvveeEK 846
Cdd:PRK02224 569 EAREEVaelNSKLAELKERIESLERIRTL-LAAIADAEDEIERLREKREALAELNDERRERLA---------------EK 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 847 HTGIQRAQGALDDAekEVKVLKEQLERAQSALEssqelassQKADKIQELEKELQNAQKR------SSEELETANEMVRS 920
Cdd:PRK02224 633 RERKRELEAEFDEA--RIEEAREDKERAEEYLE--------QVEEKLDELREERDDLQAEigavenELEELEELRERREA 702
|
570 580 590
....*....|....*....|....*....|..
gi 1572047519 921 LTAT---LENSNSETEILKQKLETLDKELQAR 949
Cdd:PRK02224 703 LENRveaLEALYDEAEELESMYGDLRAELRQR 734
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
346-1101 |
3.92e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.17 E-value: 3.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 346 DKVEKVQAMNKALESEKNEMIEKLSEAKAQGVK--------------AVLEEEERKRTEMETDLNdEIERLKEETEKMRL 411
Cdd:TIGR02169 180 EEVEENIERLDLIIDEKRQQLERLRREREKAERyqallkekreyegyELLKEKEALERQKEAIER-QLASLEEELEKLTE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 412 EMSTYKVQLEAKESREFDEEREDVEALKLELNAVKSTRDDLESRITENSSSFENYRSEAEKtLAAAKAQFEAEKKALAEK 491
Cdd:TIGR02169 259 EISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELED-AEERLAKLEAEIDKLLAE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 492 CEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEI---QAKYDDVTQKAERIQGELEESKKVLE- 567
Cdd:TIGR02169 338 IEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELkdyREKLEKLKREINELKRELDRLQEELQr 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 568 -SEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSK 646
Cdd:TIGR02169 418 lSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEA 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 647 KLDSSETSLKEFSDMIEAMK----------IQLINCEKQ-----------------------KDEAVELLKQKLEEVEKN 693
Cdd:TIGR02169 498 QARASEERVRGGRAVEEVLKasiqgvhgtvAQLGSVGERyataievaagnrlnnvvveddavAKEAIELLKRRKAGRATF 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 694 MSDVEVQKQLLLESTTSEMKQHAEAAEIVK--KQLEEA----------QSSIENLKKDAENERNLKTALESDESSAI--- 758
Cdd:TIGR02169 578 LPLNKMRDERRDLSILSEDGVIGFAVDLVEfdPKYEPAfkyvfgdtlvVEDIEAARRLMGKYRMVTLEGELFEKSGAmtg 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 759 -SEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKE 837
Cdd:TIGR02169 658 gSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKE 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 838 DLKVVEEEkhtgIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETANEM 917
Cdd:TIGR02169 738 RLEELEED----LSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEAR 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 918 VRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQqtaQIQNLQTQIYQMevekeekvel 997
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEE---ELEELEAALRDL---------- 880
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 998 vkvqlqqaaqssSSAEEALRAEIEQLEAKLKAVEQAKAEalnsLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSS 1077
Cdd:TIGR02169 881 ------------ESRLGDLKKERDELEAQLRELERKIEE----LEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE 944
|
810 820
....*....|....*....|....
gi 1572047519 1078 SSVEQALraEIEKLEAKLQEIEEE 1101
Cdd:TIGR02169 945 EIPEEEL--SLEDVQAELQRVEEE 966
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
758-1455 |
9.93e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 67.02 E-value: 9.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 758 ISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKE 837
Cdd:TIGR02169 193 IDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQ 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 838 DLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKrSSEELETANEM 917
Cdd:TIGR02169 273 LLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEE-LEREIEEERKR 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 918 VRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQmeveKEEKVEL 997
Cdd:TIGR02169 352 RDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSE----ELADLNA 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 998 VKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEE--KLEMVKVQLQQAAQ 1075
Cdd:TIGR02169 428 AIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRElaEAEAQARASEERVR 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1076 SSSSVEQALRAEIEK---LEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSS 1152
Cdd:TIGR02169 508 GGRAVEEVLKASIQGvhgTVAQLGSVGERYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRATFLPLNKMRDER 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1153 SSVEQALRAE----------------------------IEKLEAKLQEIEKAKM------------------QNSSKREQ 1186
Cdd:TIGR02169 588 RDLSILSEDGvigfavdlvefdpkyepafkyvfgdtlvVEDIEAARRLMGKYRMvtlegelfeksgamtggsRAPRGGIL 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1187 KVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEKTKMDFGELETREKRATADRENEKMEeirlretfA 1266
Cdd:TIGR02169 668 FSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKER--------L 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1267 KELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAK----------LESEQ 1336
Cdd:TIGR02169 740 EELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEeevsriearlREIEQ 819
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1337 KLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLTAANEtkavkadtDARKVV 1416
Cdd:TIGR02169 820 KLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLG--------DLKKER 891
|
730 740 750
....*....|....*....|....*....|....*....
gi 1572047519 1417 RELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAE 1455
Cdd:TIGR02169 892 DELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALE 930
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
304-649 |
1.60e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.23 E-value: 1.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 304 NLATTKAEMHAALENKDSEIEQWRRKCATLEQQDADANQRWSDKVEKVQAMNKALESEKNEmIEKLSEAKAQGVKAV--L 381
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAE-VEQLEERIAQLSKELteL 759
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 382 EEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAkESREFDEEREDVEALKLELNAVKSTRDDLESRITENSS 461
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKA-LREALDELRAELTLLNEEAANLRERLESLERRIAATER 838
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 462 SFENYRSEAEKtLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEI 541
Cdd:TIGR02168 839 RLEDLEEQIEE-LSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRREL 917
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 542 QAKyddvTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVtKKLEQSEEEV----LAAR 617
Cdd:TIGR02168 918 EEL----REKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRL-KRLENKIKELgpvnLAAI 992
|
330 340 350
....*....|....*....|....*....|....*
gi 1572047519 618 GAIQELTEKLEESEKET---STAKTELEAVSKKLD 649
Cdd:TIGR02168 993 EEYEELKERYDFLTAQKedlTEAKETLEEAIEEID 1027
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
484-1366 |
4.44e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 64.99 E-value: 4.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 484 EKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGELEE-- 561
Cdd:pfam02463 167 LKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQEll 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 562 SKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARgaiqeltEKLEESEKETSTAKTEL 641
Cdd:pfam02463 247 RDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSEL-------LKLERRKVDDEEKLKES 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 642 EAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEI 721
Cdd:pfam02463 320 EKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELEL 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 722 VKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAgqedIQ 801
Cdd:pfam02463 400 KSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDL----LK 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 802 KLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESS 881
Cdd:pfam02463 476 ETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSA 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 882 QELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEIN 961
Cdd:pfam02463 556 TADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELT 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 962 VLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSL 1041
Cdd:pfam02463 636 KLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKL 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1042 LAEKEHLQAQLHQLGVEKEEKLemvkvQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQ 1121
Cdd:pfam02463 716 KLEAEELLADRVQEAQDKINEE-----LKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEE 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1122 ELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKmrve 1201
Cdd:pfam02463 791 EKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKE---- 866
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1202 fiaKEKIISDLRSELSTISTELVVQKATVEKTKMDFGELETREKRATADreNEKMEEIRLRETFAKELETMGSALEVKET 1281
Cdd:pfam02463 867 ---ELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLL--EEKENEIEERIKEEAEILLKYEEEPEELL 941
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1282 AYNELKasaEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEELLKSSESEIEELKIKEIS 1361
Cdd:pfam02463 942 LEEADE---KEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQR 1018
|
....*
gi 1572047519 1362 AEKDR 1366
Cdd:pfam02463 1019 LKEFL 1023
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
585-973 |
1.20e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 63.14 E-value: 1.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 585 LAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEA 664
Cdd:PRK02224 204 LHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRD 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 665 MKIQLINCEKQKD-------------EAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQS 731
Cdd:PRK02224 284 LRERLEELEEERDdllaeaglddadaEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELRE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 732 SIENLKKDAENERnlkTALEsDESSAISEITKQMEAAKK-------ELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQ 804
Cdd:PRK02224 364 EAAELESELEEAR---EAVE-DRREEIEELEEEIEELRErfgdapvDLGNAEDFLEELREERDELREREAELEATLRTAR 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 805 KTWE-----------------LEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEkhtgIQRAQgALDDAEKEVKVL 867
Cdd:PRK02224 440 ERVEeaealleagkcpecgqpVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEER----LERAE-DLVEAEDRIERL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 868 KEQLERAQSALE------SSQELASSQKADKIQELEKELQNAQKRSSEELETANEmVRSLTATLENSNSETEILKQKLET 941
Cdd:PRK02224 515 EERREDLEELIAerretiEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEE-AREEVAELNSKLAELKERIESLER 593
|
410 420 430
....*....|....*....|....*....|..
gi 1572047519 942 LDKELQARQQTEKALtEEINVLTTSLAEKEQQ 973
Cdd:PRK02224 594 IRTLLAAIADAEDEI-ERLREKREALAELNDE 624
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
605-1396 |
1.28e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.16 E-value: 1.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 605 KLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKldsSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLK 684
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEK---REYEGYELLKEKEALERQKEAIERQLASLEEELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 685 QKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLK-KDAENERNLKTAlESDESSAISEITK 763
Cdd:TIGR02169 255 KLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLErSIAEKERELEDA-EERLAKLEAEIDK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 764 ---QMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQklqktwelEMAKIAKSTEDEKLAREQLAGELENAKEDLK 840
Cdd:TIGR02169 334 llaEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELE--------EVDKEFAETRDELKDYREKLEKLKREINELK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 841 VVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESsqelassqKADKIQELEKELqnaqKRSSEELETANEMVRS 920
Cdd:TIGR02169 406 RELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKED--------KALEIKKQEWKL----EQLAADLSKYEQELYD 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 921 LTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQiYQMEVEKEEKVELVKV 1000
Cdd:TIGR02169 474 LKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGER-YATAIEVAAGNRLNNV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1001 QLQQAAQSSSSAEEALRAEI-------------EQLEAKLKAVEQAKAEALN-----------------------SLLAE 1044
Cdd:TIGR02169 553 VVEDDAVAKEAIELLKRRKAgratflplnkmrdERRDLSILSEDGVIGFAVDlvefdpkyepafkyvfgdtlvveDIEAA 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1045 KEHL-QAQLHQL-------------GVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEkKNALNASL 1110
Cdd:TIGR02169 633 RRLMgKYRMVTLegelfeksgamtgGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENR-LDELSQEL 711
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1111 AEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVE---QALRAEIEKLEAKLQEIEKAKMQ-NSSKREQ 1186
Cdd:TIGR02169 712 SDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKselKELEARIEELEEDLHKLEEALNDlEARLSHS 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1187 KVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTElvvqKATVEKTKMDfgelETREKRATADRENEKMEEIRLRETFA 1266
Cdd:TIGR02169 792 RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLE----KEYLEKEIQE----LQEQRIDLKEQIKSIEKEIENLNGKK 863
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1267 KELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQ--NSQDEASESRFKTLEASAEQAKLESEQKLRALEEL 1344
Cdd:TIGR02169 864 EELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEelEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGED 943
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 1345 LKSSESEIEELKIKEI-----------------------SAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKK 1396
Cdd:TIGR02169 944 EEIPEEELSLEDVQAElqrveeeiralepvnmlaiqeyeEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
425-806 |
3.03e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 3.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 425 SREFDEEREDVEALKLELNAVKSTRDDLESRITEnsssFENYRSEAEKTLAAAKAQFEAEKKALAekceeltlKFEQADK 504
Cdd:TIGR02168 676 RREIEELEEKIEELEEKIAELEKALAELRKELEE----LEEELEQLRKELEELSRQISALRKDLA--------RLEAEVE 743
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 505 EKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQereeq 584
Cdd:TIGR02168 744 QLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEE----- 818
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 585 LAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEA 664
Cdd:TIGR02168 819 AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEE 898
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 665 MKIQLINCEKQKDEA---VELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAE 741
Cdd:TIGR02168 899 LSEELRELESKRSELrreLEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLE 978
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 742 NErnlktalesdessaISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKT 806
Cdd:TIGR02168 979 NK--------------IKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDRE 1029
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
379-1216 |
3.38e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 61.91 E-value: 3.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 379 AVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKL------ELNAVKSTRDDL 452
Cdd:pfam02463 163 AGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEyllyldYLKLNEERIDLL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 453 ESRITENSSSFENYRSEAEKtlAAAKAQFEAEKKALAEKCEELTlKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVN 532
Cdd:pfam02463 243 QELLRDEQEEIESSKQEIEK--EEEKLAQVLKENKEEEKEKKLQ-EEELKLLAKEEEELKSELLKLERRKVDDEEKLKES 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 533 EAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEE 612
Cdd:pfam02463 320 EKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELEL 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 613 VLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFsDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEK 692
Cdd:pfam02463 400 KSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGK-LTEEKEELEKQELKLLKDELELKKSEDLLKETQ 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 693 NMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKEL 772
Cdd:pfam02463 479 LVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATAD 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 773 EASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELE-NAKEDLKVVEEEKHTGIQ 851
Cdd:pfam02463 559 EVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDkRAKVVEGILKDTELTKLK 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 852 RAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSE 931
Cdd:pfam02463 639 ESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLE 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 932 TEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSS 1011
Cdd:pfam02463 719 AEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKA 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1012 AEEALRAEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQlhqlgvEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKL 1091
Cdd:pfam02463 799 QEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEEL------ALELKEEQKLEKLAEEELERLEEEITKEELLQEL 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1092 EAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQ 1171
Cdd:pfam02463 873 LLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEE 952
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1572047519 1172 EIEKAKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSEL 1216
Cdd:pfam02463 953 NNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEK 997
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
171-802 |
4.13e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.70 E-value: 4.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 171 AKYRDAVHRHNKLVDDVNTTRKLLETTQDECLQKVEKLRLEKRilaeklsnSAGNGDGKEELEKKCEDYKRMLEQCKIKI 250
Cdd:PTZ00121 1223 AKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHF--------ARRQAAIKAEEARKADELKKAEEKKKADE 1294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 251 KSLQQDKKEQQQLITVDNDDSVDPRIREMEQRIQKTEEEWTNRINESDQqhAINLATTKAEMHAALENKDSEIEQWRRKC 330
Cdd:PTZ00121 1295 AKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKK--AAEAAKAEAEAAADEAEAAEEKAEAAEKK 1372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 331 ATLEQQDADANQRWSDKVEKVQAMNKALESEKN--EMIEKLSEAKAQGVKAVLEEEERKRTEM------ETDLNDEIERL 402
Cdd:PTZ00121 1373 KEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKkaDELKKAAAAKKKADEAKKKAEEKKKADEakkkaeEAKKADEAKKK 1452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 403 KEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKLELNAVKSTRDDLESRITENSSSFENYRSEAEKTLAAAKAQFE 482
Cdd:PTZ00121 1453 AEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEE 1532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 483 AEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGELEES 562
Cdd:PTZ00121 1533 AKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEA 1612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 563 KKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELE 642
Cdd:PTZ00121 1613 KKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE 1692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 643 AVSKKldssetslkefsdmieamkiqlincEKQKDEAVELLKQKLEEVEKnmsdvevqkqllLESTTSEMKQHAEAAEIV 722
Cdd:PTZ00121 1693 ALKKE-------------------------AEEAKKAEELKKKEAEEKKK------------AEELKKAEEENKIKAEEA 1735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 723 KKQLEEAQSSIENLKKDaENERNLKTALESDESSAISEITKQMEAAKKelEASEKEKSELREQMDRLQKVHNAGQEDIQK 802
Cdd:PTZ00121 1736 KKEAEEDKKKAEEAKKD-EEEKKKIAHLKKEEEKKAEEIRKEKEAVIE--EELDEEDEKRRMEVDKKIKDIFDNFANIIE 1812
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
884-1111 |
6.51e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.78 E-value: 6.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 884 LASSQKADKIQELEKELQNAQKR---SSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEI 960
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEiaeLEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 961 NVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEA--- 1037
Cdd:COG4942 93 AELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELeae 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572047519 1038 ---LNSLLAEKEHLQAQLHQLGVEKEEKLEmvkvQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLA 1111
Cdd:COG4942 173 raeLEALLAELEEERAALEALKAERQKLLA----RLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| Grip |
smart00755 |
golgin-97, RanBP2alpha,Imh1p and p230/golgin-245; |
1530-1578 |
1.98e-08 |
|
golgin-97, RanBP2alpha,Imh1p and p230/golgin-245;
Pssm-ID: 197860 Cd Length: 46 Bit Score: 51.84 E-value: 1.98e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1572047519 1530 PAEAEYLRNVLYRYMTNRESlgkESVTLARVIGTVARFDESQMKNVISS 1578
Cdd:smart00755 1 EANFEYLKNVLLQFLTLRES---ERETLLPVISTVLQLSPEEMQKLLEV 46
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
511-1241 |
2.11e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 59.36 E-value: 2.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 511 QQLSRLQQEMLEKCDALQAEVNEAKALREE----IQAKYDDVTQKAERIQGELEESKKVLESEKQAfenekEQEREEQLA 586
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELHEKqkfyLRQSVIDLQTKLQEMQMERDAMADIRRRESQS-----QEDLRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 587 KAMEKLNS----EQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELE------------AVSKKLDS 650
Cdd:pfam15921 149 NTVHELEAakclKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDsmstmhfrslgsAISKILRE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 651 SETSLKEFSDMIEAMKIQLINCEKQKDEAVELL-KQKLEEVEKNMSDVEVQKQLLLESTTSemkqhaeaaeiVKKQLEEA 729
Cdd:pfam15921 229 LDTEISYLKGRIFPVEDQLEALKSESQNKIELLlQQHQDRIEQLISEHEVEITGLTEKASS-----------ARSQANSI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 730 QSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAK-----------KELEASEKEKSELREQMDRLQKVHNAGQE 798
Cdd:pfam15921 298 QSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKrmyedkieeleKQLVLANSELTEARTERDQFSQESGNLDD 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 799 DIQKLQKTWELEMAKIAKSTEDEK----------LAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLK 868
Cdd:pfam15921 378 QLQKLLADLHKREKELSLEKEQNKrlwdrdtgnsITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKN 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 869 EQLERAQS---ALESSQELASsQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATlensNSETEILKQKLETLDKE 945
Cdd:pfam15921 458 ESLEKVSSltaQLESTKEMLR-KVVEELTAKKMTLESSERTVSDLTASLQEKERAIEAT----NAEITKLRSRVDLKLQE 532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 946 LQARQQTEKALTE---EINVLTTSLAEKEQQtaqIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEAlRAEIEQ 1022
Cdd:pfam15921 533 LQHLKNEGDHLRNvqtECEALKLQMAEKDKV---IEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDR-RLELQE 608
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1023 LEAkLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKV---QLQQAAQSSSSVEQALRAEIEKLEAKLQEIE 1099
Cdd:pfam15921 609 FKI-LKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQerdQLLNEVKTSRNELNSLSEDYEVLKRNFRNKS 687
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1100 EEKKNALNASlaeKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSssveqALRAEIEKLEAKLQEIEKAkMQ 1179
Cdd:pfam15921 688 EEMETTTNKL---KMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQIT-----AKRGQIDALQSKIQFLEEA-MT 758
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572047519 1180 NSSKREQKVRELSN-LNEKMRVEFIAKEKIISD---LRSELSTISTELVVQKATVEKTKMDFGELE 1241
Cdd:pfam15921 759 NANKEKHFLKEEKNkLSQELSTVATEKNKMAGElevLRSQERRLKEKVANMEVALDKASLQFAECQ 824
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
703-981 |
2.27e-08 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 59.15 E-value: 2.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 703 LLLESTTSEMKQHAEAAEIVKKqlEEAQSSIENLKKDAEnernlktaLESDESSAISEITKQMEAAKKeLEASEKEKSEL 782
Cdd:PRK11281 17 FLLLCLSSAFARAASNGDLPTE--ADVQAQLDALNKQKL--------LEAEDKLVQQDLEQTLALLDK-IDRQKEETEQL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 783 REQMDRLQKVHNAGQEDIQKLQKTwelemAKIAKSTEDEKLAREQLAGELENAKEDLkvveeekhtgiQRAQGALDDAEK 862
Cdd:PRK11281 86 KQQLAQAPAKLRQAQAELEALKDD-----NDEETRETLSTLSLRQLESRLAQTLDQL-----------QNAQNDLAEYNS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 863 EVKVLKEQLERAQSALESSQelassQKADKIQELEKELQNAQKRSSEE-----------LETANEMVRSLtatLENSNSE 931
Cdd:PRK11281 150 QLVSLQTQPERAQAALYANS-----QRLQQIRNLLKGGKVGGKALRPSqrvllqaeqalLNAQNDLQRKS---LEGNTQL 221
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1572047519 932 TEILKQKLETLDKELQARQQTEKALTEEINvlTTSLAEKEQQTAQIQNLQ 981
Cdd:PRK11281 222 QDLLQKQRDYLTARIQRLEHQLQLLQEAIN--SKRLTLSEKTVQEAQSQD 269
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
584-791 |
3.37e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.47 E-value: 3.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 584 QLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIE 663
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 664 AMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTsEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENE 743
Cdd:COG4942 108 ELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAE-ELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1572047519 744 RNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQK 791
Cdd:COG4942 187 RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
469-923 |
3.43e-08 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 58.82 E-value: 3.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 469 EAEKTLAAAKAQFEAEKKALAEKCEELTlkfeqadkeknEMVQQLSRLQQEmLEKCDALQAEVNEAKALREEIqakyddv 548
Cdd:PRK04863 290 ELRRELYTSRRQLAAEQYRLVEMARELA-----------ELNEAESDLEQD-YQAASDHLNLVQTALRQQEKI------- 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 549 tqkaERIQGELEEskkvlesekqafenekeqeREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLE 628
Cdd:PRK04863 351 ----ERYQADLEE-------------------LEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALD 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 629 ESEKETST---AKTELEAVSKKLDSSETSLKEFSDMIEAMKIQlincEKQKDEAVELLKQKLeevekNMSDVEVQkqlll 705
Cdd:PRK04863 408 VQQTRAIQyqqAVQALERAKQLCGLPDLTADNAEDWLEEFQAK----EQEATEELLSLEQKL-----SVAQAAHS----- 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 706 esttsemkQHAEAAEIVKK-----QLEEAQSSIENLKKDAENERNLKTALEsdessaiseitkQMEAAKKELEASEKEKS 780
Cdd:PRK04863 474 --------QFEQAYQLVRKiagevSRSEAWDVARELLRRLREQRHLAEQLQ------------QLRMRLSELEQRLRQQQ 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 781 ELREQMDRLQKVHNAGQEDIQKLqktwelemakiakstedeklarEQLAGELENAKEDLkvvEEEKHTGIQRaQGALDDA 860
Cdd:PRK04863 534 RAERLLAEFCKRLGKNLDDEDEL----------------------EQLQEELEARLESL---SESVSEARER-RMALRQQ 587
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572047519 861 EKEVKVLKEQLER-------AQSALE-----SSQELASSQKAD----KIQELEKELQNAQKRSSEELETANEMVRSLTA 923
Cdd:PRK04863 588 LEQLQARIQRLAArapawlaAQDALArlreqSGEEFEDSQDVTeymqQLLERERELTVERDELAARKQALDEEIERLSQ 666
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
625-1446 |
4.22e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 58.31 E-value: 4.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 625 EKLEESEKETSTAKTELEAVSKKLDS----SETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKL----EEVEKNMSD 696
Cdd:pfam12128 244 TKLQQEFNTLESAELRLSHLHFGYKSdetlIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELsaadAAVAKDRSE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 697 VEV---QKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLkkdAENERNLKTALESDESSAISEITKQMEAAKKELE 773
Cdd:pfam12128 324 LEAledQHGAFLDADIETAAADQEQLPSWQSELENLEERLKAL---TGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 774 ASekekselREQMDRLqkvHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELE------NAKEDLKVVEEEKH 847
Cdd:pfam12128 401 KI-------REARDRQ---LAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKlrlnqaTATPELLLQLENFD 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 848 TGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQElASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLEN 927
Cdd:pfam12128 471 ERIERAREEQEAANAEVERLQSELRQARKRRDQASE-ALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 928 SNSETEILKQKLET-LDKELqarqqTEKALTEEINVLTTSLaekeqqtaQIQNLQTQIYqmevekeekvelvkvqlqqaa 1006
Cdd:pfam12128 550 SIGKVISPELLHRTdLDPEV-----WDGSVGGELNLYGVKL--------DLKRIDVPEW--------------------- 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1007 qssSSAEEALRAEIEQLEAKLKAvEQAKAEALnsllaekehlqaqlhqlgvekEEKLEMVKVQLQQAAQSSSSVEQALRA 1086
Cdd:pfam12128 596 ---AASEEELRERLDKAEEALQS-AREKQAAA---------------------EEQLVQANGELEKASREETFARTALKN 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1087 EIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQlevEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKL 1166
Cdd:pfam12128 651 ARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQ---LDKKHQAWLEEQKEQKREARTEKQAYWQVVEGAL 727
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1167 EAKLQEIEKAKmqnSSKREQKVRELSNLNEKMRVEFIAKEkiisdlrselstistelvVQKATVEKTKMDFGELETREKR 1246
Cdd:pfam12128 728 DAQLALLKAAI---AARRSGAKAELKALETWYKRDLASLG------------------VDPDVIAKLKREIRTLERKIER 786
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1247 ATADRENEKMEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKL---TSQFEEKLKKAQNSQDEASESRFKT- 1322
Cdd:pfam12128 787 IAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTklrRAKLEMERKASEKQQVRLSENLRGLr 866
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1323 ----------LEASAEQAKLESEQKLRALEELLKSSESEIEELK---------IKEISAEKDRSHWEVEKEMLEGEAKEL 1383
Cdd:pfam12128 867 cemsklatlkEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKkyvehfknvIADHSGSGLAETWESLREEDHYQNDKG 946
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1572047519 1384 TdRIEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTR 1446
Cdd:pfam12128 947 I-RLLDYRKLVPYLEQWFDVRVPQSIMVLREQVSILGVDLTEFYDVLADFDRRIASFSRELQR 1008
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
367-961 |
5.72e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 57.93 E-value: 5.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 367 EKLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKLELNAVK 446
Cdd:pfam12128 271 ETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLP 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 447 STRDDLESRITENSSSFENYRSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDA 526
Cdd:pfam12128 351 SWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEA 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 527 LQAEVNEAKalreeiqakyddvtqkaERIQGELEESKKVLESekqafeNEKEQEREEQLAKAMEKLNSEQNILDEVTKKL 606
Cdd:pfam12128 431 GKLEFNEEE-----------------YRLKSRLGELKLRLNQ------ATATPELLLQLENFDERIERAREEQEAANAEV 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 607 EQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINcekqKDEAVELLKQK 686
Cdd:pfam12128 488 ERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIG----KVISPELLHRT 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 687 leEVEKNMSDVEVQKQLLLESTTSEMKQhAEAAEIVKKQlEEAQSSIENLKKDAENERNLKTALEsdesSAISEITKQME 766
Cdd:pfam12128 564 --DLDPEVWDGSVGGELNLYGVKLDLKR-IDVPEWAASE-EELRERLDKAEEALQSAREKQAAAE----EQLVQANGELE 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 767 AAKKELEASEKEKSELREQMDRLQKVHNAgqediQKLQKTWELEMAKIAKSTEDEKLAREQLAGE------LENAKEDLK 840
Cdd:pfam12128 636 KASREETFARTALKNARLDLRRLFDEKQS-----EKDKKNKALAERKDSANERLNSLEAQLKQLDkkhqawLEEQKEQKR 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 841 VVEEEKHTGIQRAQGALDDAEKEVK----VLKEQLERAQSALES--SQELAS--------SQKADKIQELEKELQNAQKR 906
Cdd:pfam12128 711 EARTEKQAYWQVVEGALDAQLALLKaaiaARRSGAKAELKALETwyKRDLASlgvdpdviAKLKREIRTLERKIERIAVR 790
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 907 SSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEIN 961
Cdd:pfam12128 791 RQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLE 845
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
185-791 |
8.31e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.25 E-value: 8.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 185 DDVNTTRKLLETTQDECLQKVEKLRLEKRILAEKLSNSAgngDGKEELEKKCEDYKRMLEQCKIKIKSLQQDKKEQQQli 264
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELR---LELEELELELEEAQAEEYELLAELARLEQDIARLEE-- 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 265 tvdnddsvdpRIREMEQRIQKTEEEwtnriNESDQQHAINLATTKAEMHAALENKDSEIEQWRRKCATLEQQDADANQRW 344
Cdd:COG1196 310 ----------RRRELEERLEELEEE-----LAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 345 SDKVEKVQAMNKALESEKNEMIEKLSEAK-AQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAK 423
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEeLEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 424 ESREFDEEREDVEALKLELNAVKSTRDDLESRITENSSSfenYRSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQAD 503
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARL---LLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIG 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 504 KEKNEMVQQLSRLQQEMlekcdaLQAEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLES-EKQAFENEKEQERE 582
Cdd:COG1196 532 VEAAYEAALEAALAAAL------QNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAaLARGAIGAAVDLVA 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 583 EQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMI 662
Cdd:COG1196 606 SDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELA 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 663 EAMKIQLINCEKQKDEAVELLKQKLEEVEKnmsdvevQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAEN 742
Cdd:COG1196 686 ERLAEEELELEEALLAEEEEERELAEAEEE-------RLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPE 758
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 1572047519 743 ERNLKTAlesdeSSAISEITKQME-------AAKKELEASEKEKSELREQMDRLQK 791
Cdd:COG1196 759 PPDLEEL-----ERELERLEREIEalgpvnlLAIEEYEELEERYDFLSEQREDLEE 809
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
465-1036 |
1.47e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 56.61 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 465 NYRSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEmLEKCDALQAEVNEAKALREEIQAK 544
Cdd:PRK03918 175 KRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKE-VKELEELKEEIEELEKELESLEGS 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 545 YDDVTQKAERIQGELEESKKVLESEKQafeNEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELT 624
Cdd:PRK03918 254 KRKLEEKIRELEERIEELKKEIEELEE---KVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERI 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 625 EKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEvQKQLL 704
Cdd:PRK03918 331 KELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIE-EEISK 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 705 LESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAEnernlktalESDESSAISEITKQMEAAKKELEASEKEKSELRE 784
Cdd:PRK03918 410 ITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELT---------EEHRKELLEEYTAELKRIEKELKEIEEKERKLRK 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 785 QMDRLQKVhnagqediqklqktwelemakiaKSTEDEKLAREQLAGELENAKEDLKVVE----EEKHTGIQRAQGALDDA 860
Cdd:PRK03918 481 ELRELEKV-----------------------LKKESELIKLKELAEQLKELEEKLKKYNleelEKKAEEYEKLKEKLIKL 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 861 EKEVKVLKEQLERAQSALESSQELASsqkadKIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILK---Q 937
Cdd:PRK03918 538 KGEIKSLKKELEKLEELKKKLAELEK-----KLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKdaeK 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 938 KLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQ-IYQMEVEKEEKVELVKVQLQQAAQSSSSAEEAL 1016
Cdd:PRK03918 613 ELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEeEYEELREEYLELSRELAGLRAELEELEKRREEI 692
|
570 580
....*....|....*....|
gi 1572047519 1017 RAEIEQLEAKLKAVEQAKAE 1036
Cdd:PRK03918 693 KKTLEKLKEELEEREKAKKE 712
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1239-1498 |
1.84e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.10 E-value: 1.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1239 ELETREKRATADRENEKMEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASEs 1318
Cdd:COG1196 221 ELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELAR- 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1319 rfktleasAEQAKLESEQKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLT 1398
Cdd:COG1196 300 --------LEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1399 AANETKAVKADTDARKVVRELQKEVKQLYNELNDKNQQFDMvQEELTRLKTSKETAENGQLQVQKQMDEEdRRSEFSFKE 1478
Cdd:COG1196 372 AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL-LERLERLEEELEELEEALAELEEEEEEE-EEALEEAAE 449
|
250 260
....*....|....*....|
gi 1572047519 1479 EIASLKQKLDASLTEADDLR 1498
Cdd:COG1196 450 EEAELEEEEEALLELLAELL 469
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
604-1503 |
1.87e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 56.21 E-value: 1.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 604 KKLEQSEEEVLAARGAIQELtEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCE---KQKDEAV 680
Cdd:TIGR00606 169 KALKQKFDEIFSATRYIKAL-ETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSReivKSYENEL 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 681 ELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDessaISE 760
Cdd:TIGR00606 248 DPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERE----LVD 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 761 ITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKlqktWELEMAKIAKSTEDEKLAREQLAG-ELENAKEDL 839
Cdd:TIGR00606 324 CQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRA----RDSLIQSLATRLELDGFERGPFSErQIKNFHTLV 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 840 KVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELE---KELQNAQKRSSEELETANE 916
Cdd:TIGR00606 400 IERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKfviKELQQLEGSSDRILELDQE 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 917 MVRSLTA-TLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVL---TTSLAEKEQQTAQIQNLQTQIYQMEVEKE 992
Cdd:TIGR00606 480 LRKAERElSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLnhhTTTRTQMEMLTKDKMDKDEQIRKIKSRHS 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 993 EKVELVKVQLQQAAQSSSSAEEaLRAEIEQLEAKLKAveqakaeaLNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQ 1072
Cdd:TIGR00606 560 DELTSLLGYFPNKKQLEDWLHS-KSKEINQTRDRLAK--------LNKELASLEQNKNHINNELESKEEQLSSYEDKLFD 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1073 AAQSsssveQALRAEIEKLEAKLqeieeEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSS 1152
Cdd:TIGR00606 631 VCGS-----QDEESDLERLKEEI-----EKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDL 700
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1153 SSVEQALRAEIEKLEAKLqeiekakmqnsSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEK 1232
Cdd:TIGR00606 701 QSKLRLAPDKLKSTESEL-----------KKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEE 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1233 TKMDFGELETREKRA--------TADRENEKMEEIRlRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEK 1304
Cdd:TIGR00606 770 QETLLGTIMPEEESAkvcltdvtIMERFQMELKDVE-RKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELN 848
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1305 LKKAQNSQDEASESRFKTLEASAEQAKL-ESEQKLRALEELLKSSESEIEELkIKEISAEKdrshwevekemlegeakel 1383
Cdd:TIGR00606 849 RKLIQDQQEQIQHLKSKTNELKSEKLQIgTNLQRRQQFEEQLVELSTEVQSL-IREIKDAK------------------- 908
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1384 tDRIEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGqlqVQK 1463
Cdd:TIGR00606 909 -EQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNT---VNA 984
|
890 900 910 920
....*....|....*....|....*....|....*....|
gi 1572047519 1464 QMDEEDRRSEfSFKEEIASLKQKLDASLTEADDLRMQVSR 1503
Cdd:TIGR00606 985 QLEECEKHQE-KINEDMRLMRQDIDTQKIQERWLQDNLTL 1023
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
533-1196 |
4.04e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 54.97 E-value: 4.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 533 EAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEkqafenekeqereeqLAKAMEKLNSEQNILDEVTKKLEQSEEe 612
Cdd:TIGR00618 191 SLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKE---------------LKHLREALQQTQQSHAYLTQKREAQEE- 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 613 vlaaRGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKefsdmIEAMKIQLINCEKQKDEAVELLKQKLEEVEK 692
Cdd:TIGR00618 255 ----QLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAP-----LAAHIKAVTQIEQQAQRIHTELQSKMRSRAK 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 693 N-MSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEItkQMEAAKKE 771
Cdd:TIGR00618 326 LlMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKL--QSLCKELD 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 772 LEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLK--------VVE 843
Cdd:TIGR00618 404 ILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREqqlqtkeqIHL 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 844 EEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTA 923
Cdd:TIGR00618 484 QETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKE 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 924 TLENSNSETEILKQKLETLDKELQARQQ--------TEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKV 995
Cdd:TIGR00618 564 QMQEIQQSFSILTQCDNRSKEDIPNLQNitvrlqdlTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELAL 643
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 996 ELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQA--KAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQA 1073
Cdd:TIGR00618 644 KLTALHALQLTLTQERVREHALSIRVLPKELLASRQLAlqKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEI 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1074 AQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQT----------AQIQELQAQLHQLEVEKEEKLEMVKV 1143
Cdd:TIGR00618 724 ENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNeevtaalqtgAELSHLAAEIQFFNRLREEDTHLLKT 803
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 1572047519 1144 QLQQAAQSSSSVEQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNE 1196
Cdd:TIGR00618 804 LEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEE 856
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
206-1122 |
4.42e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 54.80 E-value: 4.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 206 EKLRLEKRILAEKLSNSAGNGDGKEELEKKCEDYKRMLEQCKIKIKSLQQDKKEQQQlitvdnddsvdpRIREMEQRIQK 285
Cdd:pfam01576 47 EQLQAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERSQQLQNEKKKMQQ------------HIQDLEEQLDE 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 286 TEEEwtnriNESDQQHAINLATTKAEMHAALENKDSEIEQWRRKCATLEQQDADANQRWSDKVEKVQAMNKaLESEKNEM 365
Cdd:pfam01576 115 EEAA-----RQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKSLSK-LKNKHEAM 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 366 IEKLSE--AKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKL--- 440
Cdd:pfam01576 189 ISDLEErlKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKire 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 441 ----------ELNAVKSTRDDLESRITENSSSFENYRSEAEKTLAAAKAQ-----------------FEAEKKALAEKCE 493
Cdd:pfam01576 269 leaqiselqeDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQqelrskreqevtelkkaLEEETRSHEAQLQ 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 494 ELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGELEE-SKKVLESEKQa 572
Cdd:pfam01576 349 EMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQElQARLSESERQ- 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 573 fenekEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSE 652
Cdd:pfam01576 428 -----RAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQ 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 653 TSLKEFSDMIEAMKIQLINCEKQKDEavelLKQKLEEVEKNMSDVEVQKQLL---LESTTSEMKQHAEAAEIVKKQLEEA 729
Cdd:pfam01576 503 EQLEEEEEAKRNVERQLSTLQAQLSD----MKKKLEEDAGTLEALEEGKKRLqreLEALTQQLEEKAAAYDKLEKTKNRL 578
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 730 QSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQE------DIQKL 803
Cdd:pfam01576 579 QQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALEEaleakeELERT 658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 804 QKTWELEMAKIAKSTEDEKLAREQLAGE---LENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALES 880
Cdd:pfam01576 659 NKQLRAEMEDLVSSKDDVGKNVHELERSkraLEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKAQFERDLQARDE 738
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 881 SQELASSQKADKIQELEKELQNAQKRSSEELETANEM---VRSLTATLENSN-SETEILKQ--KLETLDKELQARQQTEK 954
Cdd:pfam01576 739 QGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLeldLKELEAQIDAANkGREEAVKQlkKLQAQMKDLQRELEEAR 818
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 955 ALTEEInVLTTSLAEKEQQTAQIQNLQTQ--------IYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAK 1026
Cdd:pfam01576 819 ASRDEI-LAQSKESEKKLKNLEAELLQLQedlaaserARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEE 897
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1027 LKAvEQAKAEALNSLLaekEHLQAQLHQLGVEKEEKlemvkvqlQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNAL 1106
Cdd:pfam01576 898 LEE-EQSNTELLNDRL---RKSTLQVEQLTTELAAE--------RSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKF 965
|
970
....*....|....*.
gi 1572047519 1107 NASLAEKEQQTAQIQE 1122
Cdd:pfam01576 966 KSSIAALEAKIAQLEE 981
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1018-1397 |
9.07e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.92 E-value: 9.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1018 AEIEQLEAKLKAVEQaKAEALNSLLAEKEHlqaQLHQLGVEKEEKLEMVKVQ--LQQAAQSSSSVE-QALRAEIEKLEAK 1094
Cdd:TIGR02169 170 RKKEKALEELEEVEE-NIERLDLIIDEKRQ---QLERLRREREKAERYQALLkeKREYEGYELLKEkEALERQKEAIERQ 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1095 LQEIEEEKknalnaslaekEQQTAQIQELQAQLHQLEVEKEEKLEMVKvqlqqaaQSSSSVEQALRAEIEKLEA---KLQ 1171
Cdd:TIGR02169 246 LASLEEEL-----------EKLTEEISELEKRLEEIEQLLEELNKKIK-------DLGEEEQLRVKEKIGELEAeiaSLE 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1172 EIEKAKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEKTKMDFGELETRE---KRAT 1248
Cdd:TIGR02169 308 RSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFaetRDEL 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1249 ADRENEKMEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTsQFEEKLKKAQnsqDEASESRFKTLEASAE 1328
Cdd:TIGR02169 388 KDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN-ELEEEKEDKA---LEIKKQEWKLEQLAAD 463
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572047519 1329 QAKLEseQKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKL 1397
Cdd:TIGR02169 464 LSKYE--QELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQL 530
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
422-805 |
9.14e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.92 E-value: 9.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 422 AKESREFDEEREDVEALKLELNAVKSTRDDLESRITENSSSfenyRSEAEKTLaaakaqfeaekkalaekcEELTLKFEQ 501
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQE----LSDASRKI------------------GEIEKEIEQ 727
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 502 ADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKyddvtqkaeriQGELEESKKVLESEKQAFENEKEQER 581
Cdd:TIGR02169 728 LEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEEL-----------EEDLHKLEEALNDLEARLSHSRIPEI 796
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 582 EEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDM 661
Cdd:TIGR02169 797 QAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAA 876
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 662 IEAMKIQLINCEKQKDEavelLKQKLEEVEKNMSDVEVQkqllLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAE 741
Cdd:TIGR02169 877 LRDLESRLGDLKKERDE----LEAQLRELERKIEELEAQ----IEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPE 948
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572047519 742 NERNLKTALESdessaISEITKQMEA-------AKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQK 805
Cdd:TIGR02169 949 EELSLEDVQAE-----LQRVEEEIRAlepvnmlAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEK 1014
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
770-983 |
1.07e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 770 KELEASEKEKSELREQMDRLQKVhnagQEDIQKLQKTWElemakiakstEDEKLAREQLAGELENAKEDLKVVEEEkhtg 849
Cdd:COG4913 235 DDLERAHEALEDAREQIELLEPI----RELAERYAAARE----------RLAELEYLRAALRLWFAQRRLELLEAE---- 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 850 IQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQK---RSSEELETANEMVRSLTATLE 926
Cdd:COG4913 297 LEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLEReleERERRRARLEALLAALGLPLP 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1572047519 927 NSNSE-TEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQ 983
Cdd:COG4913 377 ASAEEfAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERR 434
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
716-959 |
1.16e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 716 AEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDessaISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNA 795
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQ----LAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 796 GQEDIQKLQKTWELEMAKIAKSTEDEKLAReqlagelenakedlkVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQ 875
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLAL---------------LLSPEDFLDAVRRLQYLKYLAPARREQAEELRADL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 876 SALESSQELASSQKADKiQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKA 955
Cdd:COG4942 160 AELAALRAELEAERAEL-EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
....
gi 1572047519 956 LTEE 959
Cdd:COG4942 239 AAER 242
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1153-1458 |
1.17e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.53 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1153 SSVEQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEK 1232
Cdd:TIGR02169 190 DLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1233 TKMDFGELETREKRATADRENEKMEEIRlretfakELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQ 1312
Cdd:TIGR02169 270 IEQLLEELNKKIKDLGEEEQLRVKEKIG-------ELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1313 DEASESRFKTLEASAEQAKLESE------------QKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEA 1380
Cdd:TIGR02169 343 REIEEERKRRDKLTEEYAELKEEledlraeleevdKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEEL 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1381 KELTDRIEGLEAEVKKLTAANETKAVKADTD------ARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETA 1454
Cdd:TIGR02169 423 ADLNAAIAGIEAKINELEEEKEDKALEIKKQewkleqLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARAS 502
|
....
gi 1572047519 1455 ENGQ 1458
Cdd:TIGR02169 503 EERV 506
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
228-948 |
1.33e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.53 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 228 GKEELEKKCEDYKRMLEQCKIKIKSLQQDKKE-QQQLITVDNDDSVDPRIREMEQRIQKTE-EEWTNRINESDQQHAiNL 305
Cdd:TIGR02169 164 GVAEFDRKKEKALEELEEVEENIERLDLIIDEkRQQLERLRREREKAERYQALLKEKREYEgYELLKEKEALERQKE-AI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 306 ATTKAEMHAALENKDSEIEQWRRKCATLEQQDADANQRWSD-----------KVEKVQAMNKALESEKNEMIEKLSEAKA 374
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDlgeeeqlrvkeKIGELEAEIASLERSIAEKERELEDAEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 375 QGVKAVlEEEERKRTEME------TDLNDEIERLKEETEKMRLEMSTYKVQLEAKESR------EFDEEREDVEALKLEL 442
Cdd:TIGR02169 323 RLAKLE-AEIDKLLAEIEelereiEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEfaetrdELKDYREKLEKLKREI 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 443 NAVKSTRDDLESRITENSSSFENYRSEAEKtLAAAKAQFEAEKKALAEKCEELTLKFEQ-------ADKEKNEMVQQLSR 515
Cdd:TIGR02169 402 NELKRELDRLQEELQRLSEELADLNAAIAG-IEAKINELEEEKEDKALEIKKQEWKLEQlaadlskYEQELYDLKEEYDR 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 516 LQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGEL----------EESKKVLESEKQAFENEKEQEREEQL 585
Cdd:TIGR02169 481 VEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHgtvaqlgsvgERYATAIEVAAGNRLNNVVVEDDAVA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 586 AKAMEKLNSEQ----NILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEK----------------------------- 632
Cdd:TIGR02169 561 KEAIELLKRRKagraTFLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKyepafkyvfgdtlvvedieaarrlmgkyr 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 633 ---------ETSTAKTELEAVSKKLDSSETSLKE----FSDMIEAMKIQLINCEKQKDE---AVELLKQKLEEVEKNMSD 696
Cdd:TIGR02169 641 mvtlegelfEKSGAMTGGSRAPRGGILFSRSEPAelqrLRERLEGLKRELSSLQSELRRienRLDELSQELSDASRKIGE 720
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 697 VEVQKQLL---LESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENER----NLKTALESDESSAISEITKQMEAak 769
Cdd:TIGR02169 721 IEKEIEQLeqeEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEedlhKLEEALNDLEARLSHSRIPEIQA-- 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 770 kELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAkSTEDEKLAREQLAGELENAKEDLKVVEEEKHTG 849
Cdd:TIGR02169 799 -ELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRI-DLKEQIKSIEKEIENLNGKKEELEEELEELEAA 876
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 850 IQRAQGALDDAEKEVKVLKEQLERAQSALEsSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLensn 929
Cdd:TIGR02169 877 LRDLESRLGDLKKERDELEAQLRELERKIE-ELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEEL---- 951
|
810
....*....|....*....
gi 1572047519 930 sETEILKQKLETLDKELQA 948
Cdd:TIGR02169 952 -SLEDVQAELQRVEEEIRA 969
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
388-958 |
1.51e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 1.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 388 RTEM--ETDLNDEIERLKE---ETEKMRLEMSTYKVQLEA-KESREFDEEREDVEALKLELNAVKSTRDDLEsritenss 461
Cdd:COG4913 214 REYMleEPDTFEAADALVEhfdDLERAHEALEDAREQIELlEPIRELAERYAAARERLAELEYLRAALRLWF-------- 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 462 sfenyRSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEkcdALQAEVNEAKALREEI 541
Cdd:COG4913 286 -----AQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLE---QLEREIERLERELEER 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 542 QAKYDDVTQKAERIQGELEESKKVLEsekqafenekeqereEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQ 621
Cdd:COG4913 358 ERRRARLEALLAALGLPLPASAEEFA---------------ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELR 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 622 ELTEKLEESEKETSTAKTELEAV----SKKLDSSETSLKEFSDMIEAmkiqlinceKQKDE----AVELL---------- 683
Cdd:COG4913 423 ELEAEIASLERRKSNIPARLLALrdalAEALGLDEAELPFVGELIEV---------RPEEErwrgAIERVlggfaltllv 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 684 -----KQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKqLE----EAQSSIENLKKD------AENERNLK- 747
Cdd:COG4913 494 ppehyAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAGK-LDfkphPFRAWLEAELGRrfdyvcVDSPEELRr 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 748 ---------------TALESDESSAISEI-------TKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQK 805
Cdd:COG4913 573 hpraitragqvkgngTRHEKDDRRRIRSRyvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQR 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 806 TWELEMAKI-AKSTEDEKLAREQLAGELENAKEDLKVVEEEkhtgIQRAQGALDDAEKEVKVLKEQLERAQSALESSQEL 884
Cdd:COG4913 653 LAEYSWDEIdVASAEREIAELEAELERLDASSDDLAALEEQ----LEELEAELEELEEELDELKGEIGRLEKELEQAEEE 728
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 885 assqkadkIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKEL-QARQQTEKALTE 958
Cdd:COG4913 729 --------LDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLnRAEEELERAMRA 795
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
350-979 |
2.11e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.72 E-value: 2.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 350 KVQAMNKALESEKNEMIEKLSEAKaqgvkaVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEA--KESRE 427
Cdd:TIGR04523 34 EEKQLEKKLKTIKNELKNKEKELK------NLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKlnSDLSK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 428 FDEE----REDVEALKLELNAVKSTRDDLESRITENSSSFENYRSEAEK------TLAAAKAQFEAEKKALAEKCEELTL 497
Cdd:TIGR04523 108 INSEikndKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKlnnkynDLKKQKEELENELNLLEKEKLNIQK 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 498 KFEQADKEKNEMVQQLSRLQqEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQafeneK 577
Cdd:TIGR04523 188 NIDKIKNKLLKLELLLSNLK-KKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKD-----E 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 578 EQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKleESEKETSTAKTELEAVSKKLDSSETSLKE 657
Cdd:TIGR04523 262 QNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNK--ELKSELKNQEKKLEEIQNQISQNNKIISQ 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 658 FSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLL--LESTTSEMKQHAEAAEIVKKQLEEAQSSIEN 735
Cdd:TIGR04523 340 LNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIknLESQINDLESKIQNQEKLNQQKDEQIKKLQQ 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 736 LKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIA 815
Cdd:TIGR04523 420 EKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELK 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 816 KSTEDEKLAREQLAgELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALEssqelassqkADKIQE 895
Cdd:TIGR04523 500 KLNEEKKELEEKVK-DLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKE----------IDEKNK 568
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 896 LEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTA 975
Cdd:TIGR04523 569 EIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVK 648
|
....
gi 1572047519 976 QIQN 979
Cdd:TIGR04523 649 QIKE 652
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
201-895 |
3.06e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 52.36 E-value: 3.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 201 CLQKVEKLRLEKRILAEKLSNSAGNGdgkEELEKKCEDYKRMLEQCKIKIKSLQQDKKEQQQLITVDNDdsvdprIREME 280
Cdd:TIGR00606 414 CADLQSKERLKQEQADEIRDEKKGLG---RTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQE------LRKAE 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 281 QRIQKTEEewtNRINESDQQHAINLATTKAEMHAALENKDSEIEQWRRKCATLEQQDADANQRwSDKVEKVQAMNKALES 360
Cdd:TIGR00606 485 RELSKAEK---NSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDK-MDKDEQIRKIKSRHSD 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 361 EKNEMIEKLSEAKAQGVKAVLEEEERKRTEME-TDLNDEIERLKEETEKMRLEMSTYKVQLEAKESREFD-----EERED 434
Cdd:TIGR00606 561 ELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRlAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDvcgsqDEESD 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 435 VEALKLELNAVKSTRDDLESRITENSSSFENYRSEAEKTLAAAKAQF--EAEKKALAEKCEELTLKFEQADKEKNEMVQQ 512
Cdd:TIGR00606 641 LERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFqtEAELQEFISDLQSKLRLAPDKLKSTESELKK 720
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 513 LSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESekqafenekeqereeqlakAMEKL 592
Cdd:TIGR00606 721 KEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGT-------------------IMPEE 781
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 593 NSEQNILDEVtkkleqseeevlaarGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKefsdmieamkiqlinc 672
Cdd:TIGR00606 782 ESAKVCLTDV---------------TIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQE---------------- 830
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 673 EKQKDEAVELLKQKLEEVEKNMSDVEVQKQlLLESTTSEMKQH-------AEAAEIVKKQLEEAQSSIENLKKDAENERN 745
Cdd:TIGR00606 831 KQEKQHELDTVVSKIELNRKLIQDQQEQIQ-HLKSKTNELKSEklqigtnLQRRQQFEEQLVELSTEVQSLIREIKDAKE 909
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 746 ----LKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDE 821
Cdd:TIGR00606 910 qdspLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEEC 989
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572047519 822 KLAREQLAGELENAKEDLKVVEEEKHtgIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQE 895
Cdd:TIGR00606 990 EKHQEKINEDMRLMRQDIDTQKIQER--WLQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEE 1061
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
229-798 |
3.38e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.96 E-value: 3.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 229 KEELEKKCEDYKRMLEQckikIKSLQQDKKEQQQLITVDND--DSVDPRIREMEQRIQKTEEEWTNRINESDQQHAInlA 306
Cdd:PRK02224 236 RDEADEVLEEHEERREE----LETLEAEIEDLRETIAETERerEELAEEVRDLRERLEELEEERDDLLAEAGLDDAD--A 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 307 TTKAEMHAALENKDSEIEQwrrkcaTLEQQDADAnqrwsdkvekvqamnkaleSEKNEMIEKLSEAKAQgvkavLEEEER 386
Cdd:PRK02224 310 EAVEARREELEDRDEELRD------RLEECRVAA-------------------QAHNEEAESLREDADD-----LEERAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 387 KRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESReFDEEREDVEALKLELNAVKSTRDDLESRITENSSSFENy 466
Cdd:PRK02224 360 ELREEAAELESELEEAREAVEDRREEIEELEEEIEELRER-FGDAPVDLGNAEDFLEELREERDELREREAELEATLRT- 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 467 rseAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQADkEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALReEIQAKYD 546
Cdd:PRK02224 438 ---ARERVEEAEALLEAGKCPECGQPVEGSPHVETIE-EDRERVEELEAELEDLEEEVEEVEERLERAEDLV-EAEDRIE 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 547 DVTQKAERIQGELEESKKVLESEKQAfenekeqerEEQLAKAMEKLNSEQnildevtkklEQSEEEVLAARGAIQELTEK 626
Cdd:PRK02224 513 RLEERREDLEELIAERRETIEEKRER---------AEELRERAAELEAEA----------EEKREAAAEAEEEAEEAREE 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 627 LEESEKETSTAKTELEAVsKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEvqkqllle 706
Cdd:PRK02224 574 VAELNSKLAELKERIESL-ERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFD-------- 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 707 sttsemkqhAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEItkqmeaakKELEASEKEKSELREQM 786
Cdd:PRK02224 645 ---------EARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENEL--------EELEELRERREALENRV 707
|
570
....*....|..
gi 1572047519 787 DRLQKVHNAGQE 798
Cdd:PRK02224 708 EALEALYDEAEE 719
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
921-1183 |
3.87e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 3.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 921 LTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQ----TAQIQNLQTQIyqmevekeekve 996
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRiaalARRIRALEQEL------------ 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 997 lvkvqlqqaaQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSL--LAEKEHLQAQLHQLGVEkeeklemvkvQLQQAA 1074
Cdd:COG4942 79 ----------AALEAELAELEKEIAELRAELEAQKEELAELLRALyrLGRQPPLALLLSPEDFL----------DAVRRL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1075 QSSSSVEQALRAEIEKLEAKLQEIEEeKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEmvkvQLQQAAQSSSS 1154
Cdd:COG4942 139 QYLKYLAPARREQAEELRADLAELAA-LRAELEAERAELEALLAELEEERAALEALKAERQKLLA----RLEKELAELAA 213
|
250 260
....*....|....*....|....*....
gi 1572047519 1155 VEQALRAEIEKLEAKLQEIEKAKMQNSSK 1183
Cdd:COG4942 214 ELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
362-1041 |
4.62e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 51.76 E-value: 4.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 362 KNEMIEKLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKvQLEAKESREFDEEREDVEALKLE 441
Cdd:pfam12128 199 KSMIVAILEDDGVVPPKSRLNRQQVEHWIRDIQAIAGIMKIRPEFTKLQQEFNTLE-SAELRLSHLHFGYKSDETLIASR 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 442 LNAVKSTRDDLESRITENSSSFENYRSEAEKTLAAAKAQFeAEKKALAEKCEELTLKFEQADKEKnemvqqlSRLQQEML 521
Cdd:pfam12128 278 QEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAV-AKDRSELEALEDQHGAFLDADIET-------AAADQEQL 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 522 ekcDALQAEVNEAKALREEIQAKYDDVTQKAE-RIQGELEESKKVLE--SEKQAFENEKEQEREEQLAKAMEKLNSEQNI 598
Cdd:pfam12128 350 ---PSWQSELENLEERLKALTGKHQDVTAKYNrRRSKIKEQNNRDIAgiKDKLAKIREARDRQLAVAEDDLQALESELRE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 599 LDEVTKKLEQSEEEVLAARgaIQELTEKLEeSEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDE 678
Cdd:pfam12128 427 QLEAGKLEFNEEEYRLKSR--LGELKLRLN-QATATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQ 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 679 AVELLKQKLEEVEKNMSDVEVQKQLLLesttsemkqhAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTAL--ESDESS 756
Cdd:pfam12128 504 ASEALRQASRRLEERQSALDELELQLF----------PQAGTLLHFLRKEAPDWEQSIGKVISPELLHRTDLdpEVWDGS 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 757 AISEIT---KQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKtwelEMAKIAKSTEDEKLAREQLAGELE 833
Cdd:pfam12128 574 VGGELNlygVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEE----QLVQANGELEKASREETFARTALK 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 834 NAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELET 913
Cdd:pfam12128 650 NARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDA 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 914 A-NEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQI----QNLQTQIYQME 988
Cdd:pfam12128 730 QlALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVlryfDWYQETWLQRR 809
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 1572047519 989 VEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSL 1041
Cdd:pfam12128 810 PRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENL 862
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
667-1129 |
5.85e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.92 E-value: 5.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 667 IQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLL--LESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENER 744
Cdd:COG4717 43 IRAMLLERLEKEADELFKPQGRKPELNLKELKELEEELkeAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 745 NLKTALESD-ESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEkl 823
Cdd:COG4717 123 KLLQLLPLYqELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEE-- 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 824 aREQLAGELENAKEDLKVVEEEkhtgiqraqgaLDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNA 903
Cdd:COG4717 201 -LEELQQRLAELEEELEEAQEE-----------LEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 904 QKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQ 983
Cdd:COG4717 269 LSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEE 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 984 IYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEiEQLEAKLKAVEQAKAealnsLLAEKEHLQAQLHQLGVEKEEKL 1063
Cdd:COG4717 349 LQELLREAEELEEELQLEELEQEIAALLAEAGVEDE-EELRAALEQAEEYQE-----LKEELEELEEQLEELLGELEELL 422
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572047519 1064 EMV-KVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNAslAEKEQQTAQIQELQAQLHQ 1129
Cdd:COG4717 423 EALdEEELEEELEELEEELEELEEELEELREELAELEAELEQLEED--GELAELLQELEELKAELRE 487
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
661-946 |
6.41e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 51.08 E-value: 6.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 661 MIEAM-KIQLINCEKQKDEAVELLkQKLEEVEKNmsdvEVQKQLLLESTTSEMKQHAEAAEIVKKqLEEAqSSIENLKKD 739
Cdd:PRK05771 2 APVRMkKVLIVTLKSYKDEVLEAL-HELGVVHIE----DLKEELSNERLRKLRSLLTKLSEALDK-LRSY-LPKLNPLRE 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 740 AENERNLKTA--LESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGqEDIQKLQktwELEMAKIAKS 817
Cdd:PRK05771 75 EKKKVSVKSLeeLIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGNFD-LDLSLLL---GFKYVSVFVG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 818 TEDEKLAREqlaGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKE-QLERAQ-SALESSQELAsSQKADKIQE 895
Cdd:PRK05771 151 TVPEDKLEE---LKLESDVENVEYISTDKGYVYVVVVVLKELSDEVEEELKKlGFERLElEEEGTPSELI-REIKEELEE 226
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1572047519 896 LEKELQNAQkrssEELEtanEMVRSLTATLENSNSETEILKQKLETLDKEL 946
Cdd:PRK05771 227 IEKERESLL----EELK---ELAKKYLEELLALYEYLEIELERAEALSKFL 270
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
467-1095 |
6.86e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 6.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 467 RSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEI----- 541
Cdd:TIGR00618 202 RSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEavlee 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 542 -----------------QAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNIL----- 599
Cdd:TIGR00618 282 tqerinrarkaaplaahIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHirdah 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 600 DEVTKKLEQSEEEvLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKdEA 679
Cdd:TIGR00618 362 EVATSIREISCQQ-HTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQ-RY 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 680 VELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTAL--------E 751
Cdd:TIGR00618 440 AELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCihpnparqD 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 752 SDESSAISEITKQMEAAKKELEASEK----EKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQ 827
Cdd:TIGR00618 520 IDNPGPLTRRMQRGEQTYAQLETSEEdvyhQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDL 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 828 LAGELENAK---EDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQElASSQKADKIQELEKELQNAQ 904
Cdd:TIGR00618 600 TEKLSEAEDmlaCEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQE-RVREHALSIRVLPKELLASR 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 905 KRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEIN----VLTTSLAEKEQQTAQIQNL 980
Cdd:TIGR00618 679 QLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAaredALNQSLKELMHQARTVLKA 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 981 QTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQ---AQLHQLGV 1057
Cdd:TIGR00618 759 RTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVqeeEQFLSRLE 838
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 1572047519 1058 EKEEKLEMVKVQLQQAAQSSSSVEQALR--AEIEKLEAKL 1095
Cdd:TIGR00618 839 EKSATLGEITHQLLKYEECSKQLAQLTQeqAKIIQLSDKL 878
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
311-634 |
7.00e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.22 E-value: 7.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 311 EMHAALENKDSEIEQWRRKCATLEQQDADANQRWSDKVEKVQAMNKALESEKNEMIEklSEAKAQGVKAVLEEEERKRTE 390
Cdd:TIGR02169 706 ELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE--LEARIEELEEDLHKLEEALND 783
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 391 METDLN----DEIERLKEETEKMRLEMSTYKVQLEAKESREFDEE---REDVEALKLELNAVKSTRDDLESRITENSSSF 463
Cdd:TIGR02169 784 LEARLShsriPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKeylEKEIQELQEQRIDLKEQIKSIEKEIENLNGKK 863
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 464 ENYRSEAEKtLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQA 543
Cdd:TIGR02169 864 EELEEELEE-LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGE 942
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 544 KYDDVtqKAERIQGELEESKKVLESEKQAFENEKEqereeqlaKAMEKLNSEQNILDEVTKKLEQSEEEvlaaRGAIQEL 623
Cdd:TIGR02169 943 DEEIP--EEELSLEDVQAELQRVEEEIRALEPVNM--------LAIQEYEEVLKRLDELKEKRAKLEEE----RKAILER 1008
|
330
....*....|.
gi 1572047519 624 TEKLEESEKET 634
Cdd:TIGR02169 1009 IEEYEKKKREV 1019
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
468-822 |
7.81e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.84 E-value: 7.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 468 SEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDD 547
Cdd:TIGR02169 659 SRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKER 738
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 548 VTQKAERIQgELEESKKVLESEKQAFeNEKEQEREEQLAKAMEKLNS-----EQNILDEVTKKLEQSEEEVLAARGAIQE 622
Cdd:TIGR02169 739 LEELEEDLS-SLEQEIENVKSELKEL-EARIEELEEDLHKLEEALNDlearlSHSRIPEIQAELSKLEEEVSRIEARLRE 816
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 623 LTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLinceKQKDEAVELLKQKLEEVEKNMSDvevqkq 702
Cdd:TIGR02169 817 IEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKK----EELEEELEELEAALRDLESRLGD------ 886
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 703 llLESTTSEMKQHAEAAEIVKKQLEEAQssieNLKKDAENERNLKTALESDESSAISEITKQME---AAKKELEASEKEK 779
Cdd:TIGR02169 887 --LKKERDELEAQLRELERKIEELEAQI----EKKRKRLSELKAKLEALEEELSEIEDPKGEDEeipEEELSLEDVQAEL 960
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1572047519 780 SELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEK 822
Cdd:TIGR02169 961 QRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERK 1003
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
315-633 |
9.90e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.45 E-value: 9.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 315 ALENKDSEIEQWRRKCATLEQQDADANQRWSDKVEKVQAMNKALESEKNEMIEKLSEAKAQgVKAVLEEEERKRTEMEtD 394
Cdd:TIGR02169 685 GLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEED-LSSLEQEIENVKSELK-E 762
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 395 LNDEIERLKEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKLELNAVKSTRDDLESRITENSSSFENYRSEAEKTL 474
Cdd:TIGR02169 763 LEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQR 842
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 475 AAAKAQFEAEKKALAE---KCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQK 551
Cdd:TIGR02169 843 IDLKEQIKSIEKEIENlngKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSEL 922
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 552 AERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESE 631
Cdd:TIGR02169 923 KAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEER 1002
|
..
gi 1572047519 632 KE 633
Cdd:TIGR02169 1003 KA 1004
|
|
| GRIP |
pfam01465 |
GRIP domain; The GRIP (golgin-97, RanBP2alpha,Imh1p and p230/golgin-245) domain is found in ... |
1531-1573 |
1.32e-05 |
|
GRIP domain; The GRIP (golgin-97, RanBP2alpha,Imh1p and p230/golgin-245) domain is found in many large coiled-coil proteins. It has been shown to be sufficient for targeting to the Golgi. The GRIP domain contains a completely conserved tyrosine residue. At least some of these domains have been shown to bind to GTPase Arl1, see structures in.
Pssm-ID: 460221 [Multi-domain] Cd Length: 44 Bit Score: 43.50 E-value: 1.32e-05
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 1572047519 1531 AEAEYLRNVLYRYMTNRESLGKEsvTLARVIGTVARFDESQMK 1573
Cdd:pfam01465 2 ANLEYLKNVLLQFLESKESSERK--QLLPVIATLLKFSPEEEQ 42
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
173-938 |
1.52e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 50.05 E-value: 1.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 173 YRDAVHRHNKLVDDVNTTRKLLETTQDECLQK----------VEKLRLEkriLAEKLSNSAGngdgKEELEKKCEDYKRM 242
Cdd:TIGR01612 556 WKKLIHEIKKELEEENEDSIHLEKEIKDLFDKyleiddeiiyINKLKLE---LKEKIKNISD----KNEYIKKAIDLKKI 628
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 243 LEQCKIKIKSLQQDKKEQQQLiTVDNDDSVDPRIR-EMEQRIQKTEEEWTNRINESDQQHAINlattKAEMHAALENKDS 321
Cdd:TIGR01612 629 IENNNAYIDELAKISPYQVPE-HLKNKDKIYSTIKsELSKIYEDDIDALYNELSSIVKENAID----NTEDKAKLDDLKS 703
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 322 EIEQWRRKCATLEqqdadanqrwsdkVEKVQAMNKALESEKNEMIEKLSEAK-------AQGVKAVLEEEERKRTEMETD 394
Cdd:TIGR01612 704 KIDKEYDKIQNME-------------TATVELHLSNIENKKNELLDIIVEIKkhihgeiNKDLNKILEDFKNKEKELSNK 770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 395 LND---EIERLKEETEKMRLEMSTYKVQLEAKESREfDEEREDVEALKLELNAVKSTRDDLESRITENSSSFENYRSEAE 471
Cdd:TIGR01612 771 INDyakEKDELNKYKSKISEIKNHYNDQINIDNIKD-EDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVD 849
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 472 KTLaaakaQFEAEKKalaekceeltlkfEQADKEKNEMVQQLSRLQQEML-EKCDALQAEVNEAKALREEIQAKYDDVTQ 550
Cdd:TIGR01612 850 KFI-----NFENNCK-------------EKIDSEHEQFAELTNKIKAEISdDKLNDYEKKFNDSKSLINEINKSIEEEYQ 911
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 551 KAERIQgELEESKKVLESEKQAfenekeqereeqlakaMEKLNSEQNILDEV-TKKLEQSEEEVLAARGAIQELTEKLEE 629
Cdd:TIGR01612 912 NINTLK-KVDEYIKICENTKES----------------IEKFHNKQNILKEIlNKNIDTIKESNLIEKSYKDKFDNTLID 974
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 630 SEKETSTAKTELEAVSKKLDSSETsLKEFSDMIEAMKIQLINCEKQ----KDEAVELLKQKLEEVEKNMSDVEVQKQLLL 705
Cdd:TIGR01612 975 KINELDKAFKDASLNDYEAKNNEL-IKYFNDLKANLGKNKENMLYHqfdeKEKATNDIEQKIEDANKNIPNIEIAIHTSI 1053
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 706 ESTTSEM-KQHAEAAEIVKKQ-LEEAQSSIENLKK-----------DAENERNLKTALESDE-SSAISEITKQMEAAKKE 771
Cdd:TIGR01612 1054 YNIIDEIeKEIGKNIELLNKEiLEEAEINITNFNEikeklkhynfdDFGKEENIKYADEINKiKDDIKNLDQKIDHHIKA 1133
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 772 LE----ASEKEKSELREQMDRLQKVHNAG--QEDIQKLQKTWELEMAKIAKSTEDEKlAREQLAGELENAKEDLKVVEEE 845
Cdd:TIGR01612 1134 LEeikkKSENYIDEIKAQINDLEDVADKAisNDDPEEIEKKIENIVTKIDKKKNIYD-EIKKLLNEIAEIEKDKTSLEEV 1212
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 846 KHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESS-QELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTAT 924
Cdd:TIGR01612 1213 KGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAYiEDLDEIKEKSPEIENEMGIEMDIKAEMETFNISHDDDKDHHII 1292
|
810
....*....|....
gi 1572047519 925 LENSNSETEILKQK 938
Cdd:TIGR01612 1293 SKKHDENISDIREK 1306
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1016-1176 |
1.61e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.91 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1016 LRAEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEK-EEKLEMVKVQLQQAAQSSSSVEQaLRAEIEKLEAK 1094
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASaEREIAELEAELERLDASSDDLAA-LEEQLEELEAE 700
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1095 LQEIEEEKKnALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKV-----QLQQAAQ--SSSSVEQALRAEIEKLE 1167
Cdd:COG4913 701 LEELEEELD-ELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRalleeRFAAALGdaVERELRENLEERIDALR 779
|
....*....
gi 1572047519 1168 AKLQEIEKA 1176
Cdd:COG4913 780 ARLNRAEEE 788
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
200-738 |
1.76e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 49.68 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 200 ECLQKVEKLRLEKRILAEKLsnsagngDGKEELEKKCEDYKRMLEQCKIKIKSLQQDKKEQQQlitvdnddsvdpRIREM 279
Cdd:PRK03918 204 EVLREINEISSELPELREEL-------EKLEKEVKELEELKEEIEELEKELESLEGSKRKLEE------------KIREL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 280 EQRIQKTE------EEWTNRINE--SDQQHAINLATTKAEMHAALENKDSEIEQWRRKCATLEQQDADANQRwSDKVEKV 351
Cdd:PRK03918 265 EERIEELKkeieelEEKVKELKElkEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEK-EERLEEL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 352 QAMNKALESEKNEMieKLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKEsREFDEE 431
Cdd:PRK03918 344 KKKLKELEKRLEEL--EERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARI-GELKKE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 432 REDVEALKLELNAVKSTRDDLESRITENSSS--FENYRSEAEKTLAAAKAQFEAEKKALAEKCE-ELTLKFEQADKEKNE 508
Cdd:PRK03918 421 IKELKKAIEELKKAKGKCPVCGRELTEEHRKelLEEYTAELKRIEKELKEIEEKERKLRKELRElEKVLKKESELIKLKE 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 509 MVQQLSRLQQEM----LEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQgELEESKKVLESEKQAFENEKEQEREEQ 584
Cdd:PRK03918 501 LAEQLKELEEKLkkynLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE-ELKKKLAELEKKLDELEEELAELLKEL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 585 LAKAMEKLNSeqniLDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKEtstaKTELEAVSKKLDSSETSLKEFSDMIEA 664
Cdd:PRK03918 580 EELGFESVEE----LEERLKELEPFYNEYLELKDAEKELEREEKELKKL----EEELDKAFEELAETEKRLEELRKELEE 651
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572047519 665 MKiqlincEKQKDEAVELLKQKLEEVEKNMSDVEVQKQlLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKK 738
Cdd:PRK03918 652 LE------KKYSEEEYEELREEYLELSRELAGLRAELE-ELEKRREEIKKTLEKLKEELEEREKAKKELEKLEK 718
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
348-877 |
1.96e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 348 VEKVQAMNKALE--SEKNEMIEKLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKES 425
Cdd:COG4913 258 RELAERYAAARErlAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGG 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 426 REFDEEREDVEALKLELNAVKSTRDDLESRIT-------ENSSSFENYRSEAektlAAAKAQFEAEKKALAEKCEELTLK 498
Cdd:COG4913 338 DRLEQLEREIERLERELEERERRRARLEALLAalglplpASAEEFAALRAEA----AALLEALEEELEALEEALAEAEAA 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 499 FEQADKEKNEMVQQLSRLQQ-------EMLEK----CDALQAEVNEAKALREEIQAKYDDvtqkaERIQGELEeskKVLE 567
Cdd:COG4913 414 LRDLRRELRELEAEIASLERrksnipaRLLALrdalAEALGLDEAELPFVGELIEVRPEE-----ERWRGAIE---RVLG 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 568 SekQAFENEKEQEREEQLAKAMEKLNSEQNIldeVTKKLEQSEEEVLAARGAIQELTEKLEESEKE-TSTAKTELEAVSK 646
Cdd:COG4913 486 G--FALTLLVPPEHYAAALRWVNRLHLRGRL---VYERVRTGLPDPERPRLDPDSLAGKLDFKPHPfRAWLEAELGRRFD 560
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 647 --KLDSSEtslkEFSD-----MIEAMkIQLINCEKQKD----------------EAVELLKQKLEEVEKNMSDVEVQKQL 703
Cdd:COG4913 561 yvCVDSPE----ELRRhpraiTRAGQ-VKGNGTRHEKDdrrrirsryvlgfdnrAKLAALEAELAELEEELAEAEERLEA 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 704 LlESTTSEMKQHAEAAEivkkQLEEAQSSIENLKKDAENERNLKTALES--DESSAISEITKQMEAAKKELEASEKEKSE 781
Cdd:COG4913 636 L-EAELDALQERREALQ----RLAEYSWDEIDVASAEREIAELEAELERldASSDDLAALEEQLEELEAELEELEEELDE 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 782 LREQMDRLQKVHNAGQEDIQKLQKtwELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVveeekhtgiQRAQGALDDAE 861
Cdd:COG4913 711 LKGEIGRLEKELEQAEEELDELQD--RLEAAEDLARLELRALLEERFAAALGDAVERELR---------ENLEERIDALR 779
|
570
....*....|....*.
gi 1572047519 862 KEVKVLKEQLERAQSA 877
Cdd:COG4913 780 ARLNRAEEELERAMRA 795
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
807-1166 |
2.05e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 49.67 E-value: 2.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 807 WELEMAKIAKSTEDEKlareQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAekevkvlKEQLERAQSalessqelas 886
Cdd:PRK10929 11 WLLSWGAYAATAPDEK----QITQELEQAKAAKTPAQAEIVEALQSALNWLEER-------KGSLERAKQ---------- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 887 SQKA-DKIQELEKELQnaqkrssEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKA--LTEEINVL 963
Cdd:PRK10929 70 YQQViDNFPKLSAELR-------QQLNNERDEPRSVPPNMSTDALEQEILQVSSQLLEKSRQAQQEQDRAreISDSLSQL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 964 TTSLAEKEQQTAQI-QNLQTQiyqmevekeekVELVKVQLQQAAQSSSSAEEALRAEIEQLE-AKLKAVEQAKAEALNSL 1041
Cdd:PRK10929 143 PQQQTEARRQLNEIeRRLQTL-----------GTPNTPLAQAQLTALQAESAALKALVDELElAQLSANNRQELARLRSE 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1042 LAEKEH------LQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIekleaklqEIEEEKKNALNaslaekeQ 1115
Cdd:PRK10929 212 LAKKRSqqldayLQALRNQLNSQRQREAERALESTELLAEQSGDLPKSIVAQF--------KINRELSQALN-------Q 276
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572047519 1116 QTAQIQELQAQLHQLEVEKeeklemvkVQLQQA-------AQ---SSSSVEQALRAEIEKL 1166
Cdd:PRK10929 277 QAQRMDLIASQQRQAASQT--------LQVRQAlntlreqSQwlgVSNALGEALRAQVARL 329
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1045-1507 |
2.10e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.35 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1045 KEHLQAQLHqlgvEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQ 1124
Cdd:pfam15921 73 KEHIERVLE----EYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1125 AQLHQLEVEKEEKLEMVKvqlqqaaQSSSSVEQaLRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNE-KMRVEFI 1203
Cdd:pfam15921 149 NTVHELEAAKCLKEDMLE-------DSNTQIEQ-LRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTmHFRSLGS 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1204 AKEKIISDLRSELSTISTELVVQKATVEKTKMDfgeletrekratadrENEKMEeiRLRETFAKELETMGSALEVKETAY 1283
Cdd:pfam15921 221 AISKILRELDTEISYLKGRIFPVEDQLEALKSE---------------SQNKIE--LLLQQHQDRIEQLISEHEVEITGL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1284 NELKASAEKKIAKLTSQFEEKLKKAQNsQDEASESRFKTLEASAEQAKLEseqklraLEELLKSSESEIEELKIKEISAE 1363
Cdd:pfam15921 284 TEKASSARSQANSIQSQLEIIQEQARN-QNSMYMRQLSDLESTVSQLRSE-------LREAKRMYEDKIEELEKQLVLAN 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1364 KDRSHWEVEKEMLEGEAKELTDRIEGLEAEV----KKLTAANETKAVKADTDARKVVrelqkEVKQLYNELNDKNQQFDM 1439
Cdd:pfam15921 356 SELTEARTERDQFSQESGNLDDQLQKLLADLhkreKELSLEKEQNKRLWDRDTGNSI-----TIDHLRRELDDRNMEVQR 430
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572047519 1440 VQEELTRLKTSKETAENGQLQVQKQMDEEDRRSEfSFKEEIASLKQKLDASLTEADDLRMQVSRNEKT 1507
Cdd:pfam15921 431 LEALLKAMKSECQGQMERQMAAIQGKNESLEKVS-SLTAQLESTKEMLRKVVEELTAKKMTLESSERT 497
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
250-928 |
2.15e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.45 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 250 IKSLQQDKKE-----QQQLITVDndDSVDPRIREMEQRIQKTEEEWTN---RINESDQQHAINLATTKAEMHAALENKD- 320
Cdd:pfam12128 274 IASRQEERQEtsaelNQLLRTLD--DQWKEKRDELNGELSAADAAVAKdrsELEALEDQHGAFLDADIETAAADQEQLPs 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 321 --SEIEQWRRKCATLEQQDADANQRWSDKVEKVQAMNKALESEKNEMIEKLSEAKAQGVKAVLEEEERKRTEMETDLNDE 398
Cdd:pfam12128 352 wqSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 399 IERLKEETEKMRLEMSTYKVQLEAKESREfdEEREDVEALKLELNAVKSTrddLESRITEnsssfenyRSEAEKTLAAAK 478
Cdd:pfam12128 432 KLEFNEEEYRLKSRLGELKLRLNQATATP--ELLLQLENFDERIERAREE---QEAANAE--------VERLQSELRQAR 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 479 AQFEAEKKALaekceeltlkfEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKyddVTQKAERIQGE 558
Cdd:pfam12128 499 KRRDQASEAL-----------RQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGK---VISPELLHRTD 564
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 559 LEESkKVLESEKQAFENEKEQEREEQLakameKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAK 638
Cdd:pfam12128 565 LDPE-VWDGSVGGELNLYGVKLDLKRI-----DVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKAS 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 639 TELEAVSKKLDSSETSLKEFSDMIEAMKIQlinCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEA 718
Cdd:pfam12128 639 REETFARTALKNARLDLRRLFDEKQSEKDK---KNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTE 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 719 AEIVKKQLEEAQSSIENLkkdaenernLKTALESDESSAISEITKQMEAAKKELEAS----------EKEKSELREQMDR 788
Cdd:pfam12128 716 KQAYWQVVEGALDAQLAL---------LKAAIAARRSGAKAELKALETWYKRDLASLgvdpdviaklKREIRTLERKIER 786
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 789 LQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLK 868
Cdd:pfam12128 787 IAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLR 866
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572047519 869 EQLER-AQSALESSQELASSQKADKIQELEkELQNAQKRSSEELETANEMVRSLTATLENS 928
Cdd:pfam12128 867 CEMSKlATLKEDANSEQAQGSIGERLAQLE-DLKLKRDYLSESVKKYVEHFKNVIADHSGS 926
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1016-1191 |
2.62e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.86 E-value: 2.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1016 LRAEIEQLEAKLKAVEQAK-----AEALNSLLAEKEHLQAQLHQLGVEKEE---KLEMVKVQLQQAAQ-----SSSSVEQ 1082
Cdd:COG3206 187 LRKELEEAEAALEEFRQKNglvdlSEEAKLLLQQLSELESQLAEARAELAEaeaRLAALRAQLGSGPDalpelLQSPVIQ 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1083 ALRAEIEKLEAKLQEieeekknaLNASLAEKEQQtaqIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAE 1162
Cdd:COG3206 267 QLRAQLAELEAELAE--------LSARYTPNHPD---VIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQ 335
|
170 180
....*....|....*....|....*....
gi 1572047519 1163 IEKLEAKLQEIekakmqnsSKREQKVREL 1191
Cdd:COG3206 336 LAQLEARLAEL--------PELEAELRRL 356
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1018-1494 |
2.64e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1018 AEIEQLEAKLKAVEQaKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMV-KVQLQQAAQSSSSVEQALRAEIEKLEAKLQ 1096
Cdd:COG4717 71 KELKELEEELKEAEE-KEEEYAELQEELEELEEELEELEAELEELREELeKLEKLLQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1097 EIEEEKKnALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEK- 1175
Cdd:COG4717 150 ELEERLE-ELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEe 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1176 -AKMQNSSKREQKVRELSNLNEKMRVEFIAKEkIISDLRSELSTISTELVVQKATVEKTKMDFGELeTREKRATADRENE 1254
Cdd:COG4717 229 lEQLENELEAAALEERLKEARLLLLIAAALLA-LLGLGGSLLSLILTIAGVLFLVLGLLALLFLLL-AREKASLGKEAEE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1255 KMEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLeasAEQAKLES 1334
Cdd:COG4717 307 LQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAAL---LAEAGVED 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1335 EQKLRALEELLKsseseieelkikeisaekdrshwevekemlegEAKELTDRIEGLEAEVKKLTAANETKAVKADTDark 1414
Cdd:COG4717 384 EEELRAALEQAE--------------------------------EYQELKEELEELEEQLEELLGELEELLEALDEE--- 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1415 vvrELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQLQVQKQMDEEDRRSEFSFKEEIASLKQKLDASLTEA 1494
Cdd:COG4717 429 ---ELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEA 505
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
434-690 |
3.42e-05 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 48.70 E-value: 3.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 434 DVEALKLELNAVKSTRDDLESRITENSSSFENYRSEAektlaaakAQFEAEKKALAEKCEELTlkfEQADKEKNEMVQQL 513
Cdd:pfam09726 403 DIKKLKAELQASRQTEQELRSQISSLTSLERSLKSEL--------GQLRQENDLLQTKLHNAV---SAKQKDKQTVQQLE 471
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 514 SRLQQEMlekcdalQAEVNEAKALREEIQAKyddvtqkaeriqgELEESKKvleSEKQAFENEKEQEREEQLAKAMEKLN 593
Cdd:pfam09726 472 KRLKAEQ-------EARASAEKQLAEEKKRK-------------KEEEATA---ARAVALAAASRGECTESLKQRKRELE 528
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 594 SEqniLDEVTKKLEQSEEEVLAARGAIQELtEKLEESEKETSTAKTELEAVSKKLD------SSETSLKE--FSDMIEAM 665
Cdd:pfam09726 529 SE---IKKLTHDIKLKEEQIRELEIKVQEL-RKYKESEKDTEVLMSALSAMQDKNQhlenslSAETRIKLdlFSALGDAK 604
|
250 260
....*....|....*....|....*..
gi 1572047519 666 K-IQLINCE-KQKDEAVELLKQKLEEV 690
Cdd:pfam09726 605 RqLEIAQGQiYQKDQEIKDLKQKIAEV 631
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
848-1463 |
4.01e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.52 E-value: 4.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 848 TGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELAssqkaDKIQELEKELQNAQKRSSE------ELETANEMVRSL 921
Cdd:PRK03918 155 LGLDDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIE-----ELIKEKEKELEEVLREINEisselpELREELEKLEKE 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 922 TATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTqiyqmEVEKEEKVELVKVQ 1001
Cdd:PRK03918 230 VKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKE-----KAEEYIKLSEFYEE 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1002 LQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEaLNSLLAEKEHLQAQLHQLGvEKEEKLEMVKVQLQQAAQSSSSVE 1081
Cdd:PRK03918 305 YLDELREIEKRLSRLEEEINGIEERIKELEEKEER-LEELKKKLKELEKRLEELE-ERHELYEEAKAKKEELERLKKRLT 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1082 QAlraEIEKLEAKLQEIEEEKKnalnaslaEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRA 1161
Cdd:PRK03918 383 GL---TPEKLEKELEELEKAKE--------EIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRK 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1162 EI-EKLEAKLQEIEKakmqnsskreqKVRELSNLNEKMRVEFIAKEKIISDLRselstistELVVQKATVEKTKmdfgEL 1240
Cdd:PRK03918 452 ELlEEYTAELKRIEK-----------ELKEIEEKERKLRKELRELEKVLKKES--------ELIKLKELAEQLK----EL 508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1241 ETREKRATADRENEKMEEIRLRETFAKELETMGSALEVKETAYNELKasaeKKIAKLTSQFEEKLKKAQNSQDEASESRF 1320
Cdd:PRK03918 509 EEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELK----KKLAELEKKLDELEEELAELLKELEELGF 584
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1321 KTLEasaeqaklESEQKLRALEEL------LKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEV 1394
Cdd:PRK03918 585 ESVE--------ELEERLKELEPFyneyleLKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKY 656
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572047519 1395 KKLTAANetkavkadtdARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQLQVQK 1463
Cdd:PRK03918 657 SEEEYEE----------LREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEK 715
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1016-1494 |
4.92e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 4.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1016 LRAEIEQLEAKLKAVEQ--AKAEALNSLLAEKEHLQAQLHQLGVEKEEKlemvKVQLQQAAQSSSSVEQA-LRAEIEKLE 1092
Cdd:COG4913 240 AHEALEDAREQIELLEPirELAERYAAARERLAELEYLRAALRLWFAQR----RLELLEAELEELRAELArLEAELERLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1093 AKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQE 1172
Cdd:COG4913 316 ARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEA 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1173 IEKAKMQNSSKREQKVRELSNLNEKMRvefiAKEKIISDLRSELSTISTELV-VQKATVEKTKMD------FGEL----- 1240
Cdd:COG4913 396 LEEELEALEEALAEAEAALRDLRRELR----ELEAEIASLERRKSNIPARLLaLRDALAEALGLDeaelpfVGELievrp 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1241 -----------------------ETREKRATADRENEKMEEiRLR----ETFAKELETM----GSALEVKETAYNELKAS 1289
Cdd:COG4913 472 eeerwrgaiervlggfaltllvpPEHYAAALRWVNRLHLRG-RLVyervRTGLPDPERPrldpDSLAGKLDFKPHPFRAW 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1290 AEkkiAKLTSQF-------EEKLKKAQ------------------NSQDEASESRFktLEASAEQAKLESEQKLRALEEL 1344
Cdd:COG4913 551 LE---AELGRRFdyvcvdsPEELRRHPraitragqvkgngtrhekDDRRRIRSRYV--LGFDNRAKLAALEAELAELEEE 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1345 LKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGE--AKELTDRIEGLEAEVKKLTAANetkavkadtdarKVVRELQKE 1422
Cdd:COG4913 626 LAEAEERLEALEAELDALQERREALQRLAEYSWDEidVASAEREIAELEAELERLDASS------------DDLAALEEQ 693
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1572047519 1423 VKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQLQVQKQMDEEDRRSEfsfKEEIASLKQKLDASLTEA 1494
Cdd:COG4913 694 LEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLAR---LELRALLEERFAAALGDA 762
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
763-1176 |
5.05e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 5.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 763 KQMEAAKKELEASEKEKSELREQMDRLQKVhnagQEDIQKLQKtwELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVV 842
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAEL----QEELEELEE--ELEELEAELEELREELEKLEKLLQLLPLYQELEAL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 843 EEEKHTGIQRAQGALD------DAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQkrssEELETANE 916
Cdd:COG4717 138 EAELAELPERLEELEErleelrELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQ----QRLAELEE 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 917 MVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTE----EINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKE 992
Cdd:COG4717 214 ELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAaallALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 993 EKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEE----KLEMVKV 1068
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEElqleELEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1069 QLQQAAQSSSSVE-----------QALRAEIEKLEAKLQEIEEEKKNALNAslAEKEQQTAQIQELQAQLHQLEVEKEE- 1136
Cdd:COG4717 374 ALLAEAGVEDEEElraaleqaeeyQELKEELEELEEQLEELLGELEELLEA--LDEEELEEELEELEEELEELEEELEEl 451
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1572047519 1137 KLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEKA 1176
Cdd:COG4717 452 REELAELEAELEQLEEDGELAELLQELEELKAELRELAEE 491
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
500-956 |
5.49e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 5.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 500 EQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQgELEESKKVLESEKQAFENEKEQ 579
Cdd:COG4717 49 ERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELE-ELEAELEELREELEKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 580 EreeQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAvsKKLDSSETSLKEFS 659
Cdd:COG4717 128 L---PLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSL--ATEEELQDLAEELE 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 660 DMIEAMKiQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMkqhAEAAEIVKKQLEEAQSSIENLKKD 739
Cdd:COG4717 203 ELQQRLA-ELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLI---AAALLALLGLGGSLLSLILTIAGV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 740 AENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTW-ELEMAKIAKST 818
Cdd:COG4717 279 LFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIeELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 819 EDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLEraqSALESSQELASSQKADKIQELEK 898
Cdd:COG4717 359 LEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLE---ELLGELEELLEALDEEELEEELE 435
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 899 ELQNAQKRSSEELETANEMVRSLTATLENSNSETEI--LKQKLETLDKELQARQQTEKAL 956
Cdd:COG4717 436 ELEEELEELEEELEELREELAELEAELEQLEEDGELaeLLQELEELKAELRELAEEWAAL 495
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
700-1455 |
5.97e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.04 E-value: 5.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 700 QKQLLLESTtsEMKQHAEAAEIVKKQLEEAQSSIENLKKDAEnernLKTALESDESSAISEITKQMEAAKKELEASEKEK 779
Cdd:TIGR00618 165 KKELLMNLF--PLDQYTQLALMEFAKKKSLHGKAELLTLRSQ----LLTLCTPCMPDTYHERKQVLEKELKHLREALQQT 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 780 SELREQMDRLQKVhnagQEDIQKLQKTWELEMAKIAKSTEDEKlAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDD 859
Cdd:TIGR00618 239 QQSHAYLTQKREA----QEEQLKKQQLLKQLRARIEELRAQEA-VLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIH 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 860 AEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKElqnaqkrsSEELETANEMVRSLTATLENSNSETeilkQKL 939
Cdd:TIGR00618 314 TELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQ--------EIHIRDAHEVATSIREISCQQHTLT----QHI 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 940 ETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAE 1019
Cdd:TIGR00618 382 HTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1020 IEqLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSS----VEQALRAEIEKLEAKL 1095
Cdd:TIGR00618 462 QE-SAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIdnpgPLTRRMQRGEQTYAQL 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1096 QEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAklQEIEK 1175
Cdd:TIGR00618 541 ETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACE--QHALL 618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1176 AKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELV--VQKATVEKTKMDFGELETREKRATADRE- 1252
Cdd:TIGR00618 619 RKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIrvLPKELLASRQLALQKMQSEKEQLTYWKEm 698
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1253 ----NEKMEEI--------RLRETFAKELETMGSALEVKETAYNELkasaekkIAKLTSQFEEKLKKAQNSQDEASESrf 1320
Cdd:TIGR00618 699 laqcQTLLRELethieeydREFNEIENASSSLGSDLAAREDALNQS-------LKELMHQARTVLKARTEAHFNNNEE-- 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1321 ktlEASAEQAKLESEQKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMlegEAKELTDRIEGLEAEVKKLTAa 1400
Cdd:TIGR00618 770 ---VTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNL---QCETLVQEEEQFLSRLEEKSA- 842
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 1401 netkavkadtdarkvvreLQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAE 1455
Cdd:TIGR00618 843 ------------------TLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKLN 879
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
604-937 |
7.94e-05 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 47.54 E-value: 7.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 604 KKLEQSEEEVLAARGAIQELTEKLEESeKETSTAKTELEavskkldssetslkeFSDMIEAMKIQLincEKQKDEAVEL- 682
Cdd:PLN03229 422 KKREAVKTPVRELEGEVEKLKEQILKA-KESSSKPSELA---------------LNEMIEKLKKEI---DLEYTEAVIAm 482
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 683 -LKQKLEEVEKNMSDVEVQKQLLlesttsemkqHAEAAEIVKKQLEEAQSSIenlkKDAENERNLKTAL----ESDESSA 757
Cdd:PLN03229 483 gLQERLENLREEFSKANSQDQLM----------HPVLMEKIEKLKDEFNKRL----SRAPNYLSLKYKLdmlnEFSRAKA 548
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 758 ISEITKQMEAAKKELEASEKE---KSELREQMDRLQ-KVHNAG-----------QEDIQKLQKTWELEMAKIAKSTEDEK 822
Cdd:PLN03229 549 LSEKKSKAEKLKAEINKKFKEvmdRPEIKEKMEALKaEVASSGassgdeldddlKEKVEKMKKEIELELAGVLKSMGLEV 628
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 823 LAREQLAGEL------ENAKEDLKVVEEEKHTGIQRAQGAlDDAEKEVKVLKEQLERAQsaleSSQELASSQKADKIQEL 896
Cdd:PLN03229 629 IGVTKKNKDTaeqtppPNLQEKIESLNEEINKKIERVIRS-SDLKSKIELLKLEVAKAS----KTPDVTEKEKIEALEQQ 703
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1572047519 897 EKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQ 937
Cdd:PLN03229 704 IKQKIAEALNSSELKEKFEELEAELAAARETAAESNGSLKN 744
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
526-880 |
8.39e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.64 E-value: 8.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 526 ALQAEVNEAKALREEIQAKYDDVTQKAEriQGELEESKKVLESEKQAfeNEKEQEREEQLAKAMEKLNSEQNILDEVTKK 605
Cdd:COG3096 287 ALELRRELFGARRQLAEEQYRLVEMARE--LEELSARESDLEQDYQA--ASDHLNLVQTALRQQEKIERYQEDLEELTER 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 606 LEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSET------------------------SLKEFSDM 661
Cdd:COG3096 363 LEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTraiqyqqavqalekaralcglpdlTPENAEDY 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 662 IEAMKIQlincEKQKDEAVELLKQKL--------------EEVEKNMSDVE------VQKQLLleSTTSEMKQHAEAAEI 721
Cdd:COG3096 443 LAAFRAK----EQQATEEVLELEQKLsvadaarrqfekayELVCKIAGEVErsqawqTARELL--RRYRSQQALAQRLQQ 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 722 VKKQLEEAQSSIENLKKDAENERNLKTALESDESSAIsEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQ 801
Cdd:COG3096 517 LRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAE-ELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIK 595
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1572047519 802 KLQKTwelEMAKIAKSTEDEKLaREQLAGELENAKEdlkvveeekhtgIQRAQGALDDAEKEVKVLKEQLERAQSALES 880
Cdd:COG3096 596 ELAAR---APAWLAAQDALERL-REQSGEALADSQE------------VTAAMQQLLEREREATVERDELAARKQALES 658
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
535-1131 |
1.00e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.98 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 535 KALREEIQAkYDDVTQKAERIQGELEESKKVLESEKQafENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVL 614
Cdd:PRK03918 172 KEIKRRIER-LEKFIKRTENIEELIKEKEKELEEVLR--EINEISSELPELREELEKLEKEVKELEELKEEIEELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 615 AARGAIQELTEKLEESEKETStaktELEAVSKKLDSSETSLKEfsdmIEAMKIQLINCEKQKDEavelLKQKLEEVEKNM 694
Cdd:PRK03918 249 SLEGSKRKLEEKIRELEERIE----ELKKEIEELEEKVKELKE----LKEKAEEYIKLSEFYEE----YLDELREIEKRL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 695 SDVEVQKQLLlESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEA 774
Cdd:PRK03918 317 SRLEEEINGI-EERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 775 SEKEKSELREQMDRL-QKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTgiqra 853
Cdd:PRK03918 396 LEKAKEEIEEEISKItARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKE----- 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 854 qgalddAEKEVKVLKEQLERAQSALESSQELASSQK-ADKIQELEKELQnaqKRSSEELETANEmvrsltaTLENSNSET 932
Cdd:PRK03918 471 ------IEEKERKLRKELRELEKVLKKESELIKLKElAEQLKELEEKLK---KYNLEELEKKAE-------EYEKLKEKL 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 933 EILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQiyqmevekeekvelvkvqlqqaaqssssa 1012
Cdd:PRK03918 535 IKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFE----------------------------- 585
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1013 eealraEIEQLEAKLKAVEQAKAEALNSLLAEKE--HLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEK 1090
Cdd:PRK03918 586 ------SVEELEERLKELEPFYNEYLELKDAEKEleREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEE 659
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 1572047519 1091 LEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLE 1131
Cdd:PRK03918 660 EYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLK 700
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
763-961 |
1.29e-04 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 46.61 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 763 KQMEAAKKELEASEKEKSELREQMDRLQKVHNagqediqklqktwELEMAKIaKSTEDEKLAREQ--------LAGELEN 834
Cdd:COG0497 165 RAWRALKKELEELRADEAERARELDLLRFQLE-------------ELEAAAL-QPGEEEELEEERrrlsnaekLREALQE 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 835 AKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELAS--SQKADKI----QELEK------ELQN 902
Cdd:COG0497 231 ALEALSGGEGGALDLLGQALRALERLAEYDPSLAELAERLESALIELEEAASelRRYLDSLefdpERLEEveerlaLLRR 310
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572047519 903 AQKR---SSEEL-ETANEMVRSLtATLENSNSETEILKQKLETLDKEL--------QARQQTEKALTEEIN 961
Cdd:COG0497 311 LARKygvTVEELlAYAEELRAEL-AELENSDERLEELEAELAEAEAELleaaeklsAARKKAAKKLEKAVT 380
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
773-1109 |
1.32e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 46.82 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 773 EASEKEKSELREQMDRLQKV----HNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAR---EQLAGELENAKEDLKVVEEE 845
Cdd:PLN02939 71 ENGQLENTSLRTVMELPQKStssdDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDfqlEDLVGMIQNAEKNILLLNQA 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 846 KHTGIQRAQGAL---DDAEKEVKVLKEQLERAQSALEssqeLASSQKADkIQELEKELQNAQKRSSEELETANEMVRSLT 922
Cdd:PLN02939 151 RLQALEDLEKILtekEALQGKINILEMRLSETDARIK----LAAQEKIH-VEILEEQLEKLRNELLIRGATEGLCVHSLS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 923 ATLENSNSETEILKQKLETLDKELQARQQTEKA---LTEEINVLTTSLAEKE-------QQTAQIQNLQTQIYQMEVEKE 992
Cdd:PLN02939 226 KELDVLKEENMLLKDDIQFLKAELIEVAETEERvfkLEKERSLLDASLRELEskfivaqEDVSKLSPLQYDCWWEKVENL 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 993 EKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKaealnsLLAEKEHLQaqlhqlgvekEEKLEMVKVQLQQ 1072
Cdd:PLN02939 306 QDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVSK------FSSYKVELL----------QQKLKLLEERLQA 369
|
330 340 350
....*....|....*....|....*....|....*...
gi 1572047519 1073 AAQSSSSVEQALRAEIEKLEAKLQE-IEEEKKNALNAS 1109
Cdd:PLN02939 370 SDHEIHSYIQLYQESIKEFQDTLSKlKEESKKRSLEHP 407
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
333-657 |
1.34e-04 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 46.77 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 333 LEQQDADANQRWSDKVEkvQAMNKALESEKNEMIEKLSEA-KAQGVK---AVLEEEERKRTE----METDLNDEIERLKE 404
Cdd:PLN03229 441 LKEQILKAKESSSKPSE--LALNEMIEKLKKEIDLEYTEAvIAMGLQerlENLREEFSKANSqdqlMHPVLMEKIEKLKD 518
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 405 ETEKMRLEMSTY-----KVQL--EAKESREFDEEREDVEALKLELNA-VKSTRDdlesritensssfenyRSEAEKTLAA 476
Cdd:PLN03229 519 EFNKRLSRAPNYlslkyKLDMlnEFSRAKALSEKKSKAEKLKAEINKkFKEVMD----------------RPEIKEKMEA 582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 477 AKAQFEAEKKALAEKCEELTLkfEQADKEKNEMVQQLSRLQQEMlekcdALQAEVNEAKALREEIQAKYDDVTQKAERIQ 556
Cdd:PLN03229 583 LKAEVASSGASSGDELDDDLK--EKVEKMKKEIELELAGVLKSM-----GLEVIGVTKKNKDTAEQTPPPNLQEKIESLN 655
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 557 GELeeSKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEqniLDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETST 636
Cdd:PLN03229 656 EEI--NKKIERVIRSSDLKSKIELLKLEVAKASKTPDVT---EKEKIEALEQQIKQKIAEALNSSELKEKFEELEAELAA 730
|
330 340
....*....|....*....|.
gi 1572047519 637 AKTELEAVSKKLdsSETSLKE 657
Cdd:PLN03229 731 ARETAAESNGSL--KNDDDKE 749
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
797-1037 |
1.37e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 797 QEDIQKLQKtwelEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEkhtgIQRAQGALDDAEKEVKVLKEQLERAQS 876
Cdd:COG4942 26 EAELEQLQQ----EIAELEKELAALKKEEKALLKQLAALERRIAALARR----IRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 877 ALESSQELassqkadkIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKAL 956
Cdd:COG4942 98 ELEAQKEE--------LAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 957 TEEINVLTTSLAEKEQQTAQIQNLQTQiyqmEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAE 1036
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAE----RQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
.
gi 1572047519 1037 A 1037
Cdd:COG4942 246 A 246
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
717-1424 |
1.37e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.65 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 717 EAAEIVKKQLEEAQSSIENLK---KDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELRE----QMDRL 789
Cdd:pfam15921 96 ESNELHEKQKFYLRQSVIDLQtklQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEdsntQIEQL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 790 QKVHNAGQEDIQKLQKTW-ELEMAKIAKSTEDEKLAREQLagelENAKEDLKVVEEEKHTGIQRAQGALDDAEkevkvlk 868
Cdd:pfam15921 176 RKMMLSHEGVLQEIRSILvDFEEASGKKIYEHDSMSTMHF----RSLGSAISKILRELDTEISYLKGRIFPVE------- 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 869 EQLERAQSALESSQELASSQKADKIQEL----EKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDK 944
Cdd:pfam15921 245 DQLEALKSESQNKIELLLQQHQDRIEQLisehEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLES 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 945 -------ELQARQQT--------EKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSS 1009
Cdd:pfam15921 325 tvsqlrsELREAKRMyedkieelEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLW 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1010 SSAEEAlRAEIEQLEAKL--KAVEQAKAEALnsLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQaLRAE 1087
Cdd:pfam15921 405 DRDTGN-SITIDHLRRELddRNMEVQRLEAL--LKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEM-LRKV 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1088 IEKLEAKLQEIEEEKKNAlnaslaekEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLE 1167
Cdd:pfam15921 481 VEELTAKKMTLESSERTV--------SDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEA 552
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1168 AKLQEIEKAKM-----QNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEKTKMDFGELET 1242
Cdd:pfam15921 553 LKLQMAEKDKVieilrQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLEL 632
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1243 rEKRATADRENEKMEEIR----LRETFAKELETMGSALEVKETAYNELKASAEKKIAKL---TSQFEEKLKKAQnSQDEA 1315
Cdd:pfam15921 633 -EKVKLVNAGSERLRAVKdikqERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMettTNKLKMQLKSAQ-SELEQ 710
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1316 SESRFKTLEAS----------------AEQAKLESEQ-KLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEG 1378
Cdd:pfam15921 711 TRNTLKSMEGSdghamkvamgmqkqitAKRGQIDALQsKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAG 790
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 1572047519 1379 EAKELTDRIEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVK 1424
Cdd:pfam15921 791 ELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVR 836
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
591-878 |
1.52e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 46.39 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 591 KLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAmkiQLI 670
Cdd:pfam06160 80 RFKKAKKALDEIEELLDDIEEDIKQILEELDELLESEEKNREEVEELKDKYRELRKTLLANRFSYGPAIDELEK---QLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 671 NCEKQKDEAVEL---------------LKQKLEEVEKNMSDV---------EVQKQLL-LESTTSEMKQH---------A 716
Cdd:pfam06160 157 EIEEEFSQFEELtesgdylearevlekLEEETDALEELMEDIpplyeelktELPDQLEeLKEGYREMEEEgyalehlnvD 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 717 EAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESD--------ESSAISEITKQMEAAKKELEASEKEKSELREQMDR 788
Cdd:pfam06160 237 KEIQQLEEQLEENLALLENLELDEAEEALEEIEERIDqlydllekEVDAKKYVEKNLPEIEDYLEHAEEQNKELKEELER 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 789 LQK--VHNAGQEDIQKLQKTWELEMAK----IAKSTEDEKLAREQLAGELENAKEDLKVVEEEkhtgIQRAQGALDDAEK 862
Cdd:pfam06160 317 VQQsyTLNENELERVRGLEKQLEELEKrydeIVERLEEKEVAYSELQEELEEILEQLEEIEEE----QEEFKESLQSLRK 392
|
330
....*....|....*.
gi 1572047519 863 EVKVLKEQLERAQSAL 878
Cdd:pfam06160 393 DELEAREKLDEFKLEL 408
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
500-784 |
1.61e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 1.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 500 EQADKEKNEMVQQLSRlQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQgeLEESKKVLESEKQafenekeq 579
Cdd:pfam17380 299 ERLRQEKEEKAREVER-RRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIR--QEERKRELERIRQ-------- 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 580 ereEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAI---QELTEKLEESEKETSTAKTELEAVS----KKLDSSE 652
Cdd:pfam17380 368 ---EEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKileEERQRKIQQQKVEMEQIRAEQEEARqrevRRLEEER 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 653 TSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAE----IVKKQLEE 728
Cdd:pfam17380 445 AREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEErkrkLLEKEMEE 524
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1572047519 729 AQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELRE 784
Cdd:pfam17380 525 RQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQ 580
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
451-1041 |
1.65e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 1.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 451 DLESRITENSSSFENYrSEAEKTLAAAKAQFEA--EKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEK-CDAL 527
Cdd:COG4913 222 DTFEAADALVEHFDDL-ERAHEALEDAREQIELlePIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAeLEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 528 QAEVNEAKALREEIQAKYDDVTQKAERIQGELEES----KKVLESEKQAfenekeqeREEQLAKAMEKLNSEQNILDEVT 603
Cdd:COG4913 301 RAELARLEAELERLEARLDALREELDELEAQIRGNggdrLEQLEREIER--------LERELEERERRRARLEALLAALG 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 604 KKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLdssetslkefsdmieamkiqlincEKQKDEavelL 683
Cdd:COG4913 373 LPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDL------------------------RRELRE----L 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 684 KQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAE----AAEIVKKQLEEA--QSSIE--------NLKKDAE-------- 741
Cdd:COG4913 425 EAEIASLERRKSNIPARLLALRDALAEALGLDEAelpfVGELIEVRPEEErwRGAIErvlggfalTLLVPPEhyaaalrw 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 742 -NERNLKTAL------ESDESSAISEITKQMEAAK---KELEASEKEKSELREQMDRLqKVHNAgqEDIQKLQKTWELE- 810
Cdd:COG4913 505 vNRLHLRGRLvyervrTGLPDPERPRLDPDSLAGKldfKPHPFRAWLEAELGRRFDYV-CVDSP--EELRRHPRAITRAg 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 811 MAKiAKSTEDEKLAREQLAGEL---ENAKEDLKVVEEEkhtgIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASS 887
Cdd:COG4913 582 QVK-GNGTRHEKDDRRRIRSRYvlgFDNRAKLAALEAE----LAELEEELAEAEERLEALEAELDALQERREALQRLAEY 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 888 QKADK-IQELEKELQNAQkrssEELETanemvrsltatLENSNSEteilkqkLETLDKELQARQQTEKALTEEINVLTTS 966
Cdd:COG4913 657 SWDEIdVASAEREIAELE----AELER-----------LDASSDD-------LAALEEQLEELEAELEELEEELDELKGE 714
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 967 LAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSL 1041
Cdd:COG4913 715 IGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
1016-1129 |
1.66e-04 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 45.81 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1016 LRAEIEQLEAKLKAVEQ--AKAEALNSLLAEKEHLQAQLHQLGVE---KEEKLEMVKVQLQQAAQSSSSVEQAlRAEIEK 1090
Cdd:COG1566 81 LQAALAQAEAQLAAAEAqlARLEAELGAEAEIAAAEAQLAAAQAQldlAQRELERYQALYKKGAVSQQELDEA-RAALDA 159
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1572047519 1091 LEAKLQEIEEEKKNALNA--SLAEKEQQTAQIQELQAQLHQ 1129
Cdd:COG1566 160 AQAQLEAAQAQLAQAQAGlrEEEELAAAQAQVAQAEAALAQ 200
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
309-971 |
1.86e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 46.25 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 309 KAEMHAALENKDSEIEQWRRKCATLE---QQDADANQRWSDKVEKVQAMNKALESEKNEM-----IEKLSEAKAQGVKAV 380
Cdd:pfam05483 94 KVSIEAELKQKENKLQENRKIIEAQRkaiQELQFENEKVSLKLEEEIQENKDLIKENNATrhlcnLLKETCARSAEKTKK 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 381 LEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKLELNAVKSTRDDLESRITENS 460
Cdd:pfam05483 174 YEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKE 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 461 SSFENYRSEAEKTlaaakaqfeaekkalAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREE 540
Cdd:pfam05483 254 NKMKDLTFLLEES---------------RDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEED 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 541 IQAKYDDVTQKAERIQGELEESKK---------------------VLESEKQAFENEKEQEREEQLA--------KAMEK 591
Cdd:pfam05483 319 LQIATKTICQLTEEKEAQMEELNKakaahsfvvtefeattcsleeLLRTEQQRLEKNEDQLKIITMElqkksselEEMTK 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 592 LNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETS----TAKTELEAVSKKLDSSETSLKEFSDMIEAMKI 667
Cdd:pfam05483 399 FKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIfllqAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKT 478
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 668 QLINcEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERN-- 745
Cdd:pfam05483 479 ELEK-EKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREef 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 746 ------LKTALESDESSAISeITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQK----------TWEL 809
Cdd:pfam05483 558 iqkgdeVKCKLDKSEENARS-IEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKkgsaenkqlnAYEI 636
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 810 EMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQK 889
Cdd:pfam05483 637 KVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQY 716
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 890 ADKIQELEKELQNAQKRSSEEletanemvRSLTATLEnsnSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAE 969
Cdd:pfam05483 717 DKIIEERDSELGLYKNKEQEQ--------SSAKAALE---IELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKD 785
|
..
gi 1572047519 970 KE 971
Cdd:pfam05483 786 KK 787
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
229-946 |
1.97e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.12 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 229 KEELEKKCEDYKRMLEQCKIKIKSLQQDKKEQQQLITVDNDDSVDP--------RIREMEQRIQKTEEEWTNRINESDQQ 300
Cdd:pfam02463 218 KLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEeeklaqvlKENKEEEKEKKLQEEELKLLAKEEEE 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 301 HAINLATTKAEMHAALENKDSEIEQWRRKCATLEQQDADANQRWSDK--------VEKVQAMNKALESEKNEMIEKLSEA 372
Cdd:pfam02463 298 LKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELkeleikreAEEEEEEELEKLQEKLEQLEEELLA 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 373 KAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVqLEAKESREFDEEREDVEALKLELNAVKSTRDDL 452
Cdd:pfam02463 378 KKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKE-EKKEELEILEEEEESIELKQGKLTEEKEELEKQ 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 453 ESRITENSSSFENYRSEAEKTLAAAKAQFEAEKKALAEKCEELTLKFEqadKEKNEMVQQLSRLQQEMLEKCDALQAEVN 532
Cdd:pfam02463 457 ELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESK---ARSGLKVLLALIKDGVGGRIISAHGRLGD 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 533 EAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEE 612
Cdd:pfam02463 534 LGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATL 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 613 VLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSdMIEAMKIQLINCEKQKDEAVELLKQKLEEVEK 692
Cdd:pfam02463 614 EADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAE-KSEVKASLSELTKELLEIQELQEKAESELAKE 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 693 NMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESsaiseITKQMEAAKKEL 772
Cdd:pfam02463 693 EILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKS-----RLKKEEKEEEKS 767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 773 EASEKEKsELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQR 852
Cdd:pfam02463 768 ELSLKEK-ELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQ 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 853 AQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSET 932
Cdd:pfam02463 847 KLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEE 926
|
730
....*....|....
gi 1572047519 933 EILKQKLETLDKEL 946
Cdd:pfam02463 927 AEILLKYEEEPEEL 940
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
533-888 |
1.99e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 46.37 E-value: 1.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 533 EAKALREeiQAKYDDVTQKAERIQGELEESKKVLESEKQafenekeqereeqlakameklnseqNILDEVTK---KLEQS 609
Cdd:NF012221 1543 QADAVSK--HAKQDDAAQNALADKERAEADRQRLEQEKQ-------------------------QQLAAISGsqsQLEST 1595
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 610 EEEVLAARGAIQE--LTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSD-----MIEAMKIQLINCEKQKDEAVEL 682
Cdd:NF012221 1596 DQNALETNGQAQRdaILEESRAVTKELTTLAQGLDALDSQATYAGESGDQWRNpfaggLLDRVQEQLDDAKKISGKQLAD 1675
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 683 LKQKLEEVEKNMSDvEVQKQlllESTTSEMKQHAEAAEivkKQLEEAQSSIENLKKDAENERNLKTALESDESSAIseit 762
Cdd:NF012221 1676 AKQRHVDNQQKVKD-AVAKS---EAGVAQGEQNQANAE---QDIDDAKADAEKRKDDALAKQNEAQQAESDANAAA---- 1744
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 763 kqmeaakkeleasekEKSELREQMDRLQKVHNAGQediqkLQKTwelemAKIAKSTEDEKLAREQLAG--------ELEN 834
Cdd:NF012221 1745 ---------------NDAQSRGEQDASAAENKANQ-----AQAD-----AKGAKQDESDKPNRQGAAGsglsgkaySVEG 1799
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 835 AKEDLKVVEEEKHTGIQ-RAQGALDDAEKEVkvlkeqLERAQSALESSQELASSQ 888
Cdd:NF012221 1800 VAEPGSHINPDSPAAADgRFSEGLTEQEQEA------LEGATNAVNRLQINAGSR 1848
|
|
| MutS2 |
COG1193 |
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair]; |
850-976 |
2.10e-04 |
|
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair];
Pssm-ID: 440806 [Multi-domain] Cd Length: 784 Bit Score: 45.90 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 850 IQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKAD---KIQELEKELQNAQKRSSEELETANEMVRSLtatLE 926
Cdd:COG1193 502 IERARELLGEESIDVEKLIEELERERRELEEEREEAERLREElekLREELEEKLEELEEEKEEILEKAREEAEEI---LR 578
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1572047519 927 NSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQ 976
Cdd:COG1193 579 EARKEAEELIRELREAQAEEEELKEARKKLEELKQELEEKLEKPKKKAKP 628
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
206-657 |
2.26e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 206 EKLRLEKRILAEKLSNSAGNGDGKEELEKKCEDYKRMLEQCKIKIKSLQ---QDKKEQQQLITVDNDDSVDPRIREMEQr 282
Cdd:PRK03918 317 SRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEeakAKKEELERLKKRLTGLTPEKLEKELEE- 395
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 283 IQKTEEEWTNRINESDQQHAiNLATTKAEMHAALEnkdsEIEQWRRKCATLEQQDADANQRwsDKVEKVQAMNKALESEK 362
Cdd:PRK03918 396 LEKAKEEIEEEISKITARIG-ELKKEIKELKKAIE----ELKKAKGKCPVCGRELTEEHRK--ELLEEYTAELKRIEKEL 468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 363 NEMIEKLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEmstykvqleakesrEFDEEREDVEALKLEL 442
Cdd:PRK03918 469 KEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLE--------------ELEKKAEEYEKLKEKL 534
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 443 NAVKSTRDDLESRItENSSSFENYRSEAEKTLAAAkaqfEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLE 522
Cdd:PRK03918 535 IKLKGEIKSLKKEL-EKLEELKKKLAELEKKLDEL----EEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKD 609
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 523 KCDALQAEVNEAKALREEIQ---AKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNIL 599
Cdd:PRK03918 610 AEKELEREEKELKKLEEELDkafEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRR 689
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1572047519 600 DEVTKKLEQSEEEvlaaRGAIQELTEKLEESEKetstAKTELEAVSKKLDSSETSLKE 657
Cdd:PRK03918 690 EEIKKTLEKLKEE----LEEREKAKKELEKLEK----ALERVEELREKVKKYKALLKE 739
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
475-698 |
2.28e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 2.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 475 AAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMlekcDALQAEVNEAKALREEIQAKYDDVTQKAER 554
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRI----AALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 555 IQGELEESKKVLESEKQAFENEKEQEREEQLAKA--MEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEK 632
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLALLLSPedFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572047519 633 ETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVE 698
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
421-631 |
2.41e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 2.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 421 EAKESREF-----DEEREDVEALKLELNAVKSTRD--DLESR---ITENSSSFENYRSEAEKTLAAAKAQFEAEKKALAE 490
Cdd:COG3206 172 EARKALEFleeqlPELRKELEEAEAALEEFRQKNGlvDLSEEaklLLQQLSELESQLAEARAELAEAEARLAALRAQLGS 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 491 KCEELTlkFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEK 570
Cdd:COG3206 252 GPDALP--ELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEALQARE 329
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572047519 571 QafenekeqereeQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESE 631
Cdd:COG3206 330 A------------SLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
856-959 |
2.62e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 45.84 E-value: 2.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 856 ALDDAEKEVkvlkEQLERAQSALESSQELASSQKA----DKIQELEKELQNAQKRSSEELETANEmVRSLTATLENSNSE 931
Cdd:COG0542 412 ELDELERRL----EQLEIEKEALKKEQDEASFERLaelrDELAELEEELEALKARWEAEKELIEE-IQELKEELEQRYGK 486
|
90 100
....*....|....*....|....*....
gi 1572047519 932 TEILKQKLETLDKELQARQQTEKA-LTEE 959
Cdd:COG0542 487 IPELEKELAELEEELAELAPLLREeVTEE 515
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1016-1456 |
2.79e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.88 E-value: 2.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1016 LRAEIEQLEAKLKAVEQaKAEALNSLLAEKEHLQAQLHQLGVEkeEKLEMVKVQLQQAAQSSSSVeqalRAEIEKLEAKL 1095
Cdd:pfam15921 229 LDTEISYLKGRIFPVED-QLEALKSESQNKIELLLQQHQDRIE--QLISEHEVEITGLTEKASSA----RSQANSIQSQL 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1096 QEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQqAAQSSSSVEQALRAEIEKLEAKLQEIEK 1175
Cdd:pfam15921 302 EIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLV-LANSELTEARTERDQFSQESGNLDDQLQ 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1176 AKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEKTKMDF-GELEtrEKRATADRENE 1254
Cdd:pfam15921 381 KLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECqGQME--RQMAAIQGKNE 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1255 KMEEI-----------RLRETFAKELETMGSALEVKETAYNELKASAEKK----------IAKLTSQFEEKLKKAQNSQD 1313
Cdd:pfam15921 459 SLEKVssltaqlestkEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKeraieatnaeITKLRSRVDLKLQELQHLKN 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1314 EasESRFKTLEASAEQAKLESEQKLRALEELLKSSES---------------EIEELKI-KEISAEK-DRSHWEVEKEML 1376
Cdd:pfam15921 539 E--GDHLRNVQTECEALKLQMAEKDKVIEILRQQIENmtqlvgqhgrtagamQVEKAQLeKEINDRRlELQEFKILKDKK 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1377 EGEAKELTDRIEGLEAEVKKLTAANETKaVKADTDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAEN 1456
Cdd:pfam15921 617 DAKIRELEARVSDLELEKVKLVNAGSER-LRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTN 695
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
275-805 |
2.92e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.48 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 275 RIREMEQRIQKTEEEWTNRINESDQQHAInLATTKAEMHAALENKDSEIEQWRRKCATLEQQDADANQRWSDKVEKVQAM 354
Cdd:pfam05483 216 KLKEDHEKIQHLEEEYKKEINDKEKQVSL-LLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 355 NKALESEKNEMIEKLSEAKAqgvkavLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEA----------KE 424
Cdd:pfam05483 295 TKELEDIKMSLQRSMSTQKA------LEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEAttcsleellrTE 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 425 SREFDEEREDVEALKLELNAVKSTRDDLESRITENSSSFENYRS--EAEKTLAAAKAQFEAEKKALAEKCEELTLKFEQA 502
Cdd:pfam05483 369 QQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKilAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAR 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 503 DKEKNEMVQQLSRL---QQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGelEESKKVLESEKQAFENEKEQ 579
Cdd:pfam05483 449 EKEIHDLEIQLTAIktsEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQ--EASDMTLELKKHQEDIINCK 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 580 EREEQLAKAMEKLNSEQNIL---------------DEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAV 644
Cdd:pfam05483 527 KQEERMLKQIENLEEKEMNLrdelesvreefiqkgDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENK 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 645 SKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDE---AVELLKQKLEEV----EKNMSDVEVQKQLLLESTTSEMKQHAE 717
Cdd:pfam05483 607 NKNIEELHQENKALKKKGSAENKQLNAYEIKVNKlelELASAKQKFEEIidnyQKEIEDKKISEEKLLEEVEKAKAIADE 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 718 AAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQ 797
Cdd:pfam05483 687 AVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEK 766
|
....*...
gi 1572047519 798 EDIQKLQK 805
Cdd:pfam05483 767 EEKEKLKM 774
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
919-1129 |
3.11e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 3.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 919 RSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSlAEKEQQTAQIQNLQTQIYQMEVEKEEKVELV 998
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLS-EEAKLLLQQLSELESQLAEARAELAEAEARL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 999 KVQLQQAAQSSSSAEEALR-AEIEQLEAKLKAVEQAKAEALNSLLAEkehlqaqlHQLGVEKEEKLEMVKVQLQQAAQSs 1077
Cdd:COG3206 243 AALRAQLGSGPDALPELLQsPVIQQLRAQLAELEAELAELSARYTPN--------HPDVIALRAQIAALRAQLQQEAQR- 313
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1572047519 1078 ssVEQALRAEIEKLEAKLQEieeekknaLNASLAEKEQQTAQIQELQAQLHQ 1129
Cdd:COG3206 314 --ILASLEAELEALQAREAS--------LQAQLAQLEARLAELPELEAELRR 355
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
911-1191 |
3.13e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 3.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 911 LETANEMVRSLTaTLENSNSETEILKQKLETLdKELQARQQTEKALTEEINVLttslaEKEQQTAQIQNLQTQIyqmeve 990
Cdd:COG4913 224 FEAADALVEHFD-DLERAHEALEDAREQIELL-EPIRELAERYAAARERLAEL-----EYLRAALRLWFAQRRL------ 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 991 keekvelvkvqlqqaaQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSLLAekehLQAQLHQLGVEKEEKLEMVKVQL 1070
Cdd:COG4913 291 ----------------ELLEAELEELRAELARLEAELERLEARLDALREELDE----LEAQIRGNGGDRLEQLEREIERL 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1071 QQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEkeeklemvkvqlqqaaq 1150
Cdd:COG4913 351 ERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAA----------------- 413
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1572047519 1151 ssssvEQALRAEIEKLEAKLQEIEKAKMqNSSKREQKVREL 1191
Cdd:COG4913 414 -----LRDLRRELRELEAEIASLERRKS-NIPARLLALRDA 448
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1016-1504 |
3.30e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.44 E-value: 3.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1016 LRAEIEQLEAKLKAVEQAKA--EALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQaLRAEIEKLEA 1093
Cdd:PRK03918 174 IKRRIERLEKFIKRTENIEEliKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEE-LEKELESLEG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1094 KLQEIEEEKKNaLNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVK--VQLQQAAQSSSSVEQALRAEIEKLEAKLQ 1171
Cdd:PRK03918 253 SKRKLEEKIRE-LEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEfyEEYLDELREIEKRLSRLEEEINGIEERIK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1172 EIE--KAKMQNSSKREQKV-RELSNLNEKMRV--EFIAKEKIISDLRSELSTISTELVVQK---ATVEKTKMDFGELETR 1243
Cdd:PRK03918 332 ELEekEERLEELKKKLKELeKRLEELEERHELyeEAKAKKEELERLKKRLTGLTPEKLEKEleeLEKAKEEIEEEISKIT 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1244 EKRATAD-RENEKMEEIRLRETFAKELETMGSALEVKETAYNELKASAE-KKIAKLTSQFEEKLKKAQNSQDE-----AS 1316
Cdd:PRK03918 412 ARIGELKkEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAElKRIEKELKEIEEKERKLRKELRElekvlKK 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1317 ESRFKTLEASAEQAK-LESEQKLRALEELLKSSEsEIEELKIKEISAEKDRSHWEVE---KEMLEGEAKELTDRIEGLEA 1392
Cdd:PRK03918 492 ESELIKLKELAEQLKeLEEKLKKYNLEELEKKAE-EYEKLKEKLIKLKGEIKSLKKElekLEELKKKLAELEKKLDELEE 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1393 EVKKLTAANETKAVKADTDARKVVRELQ-------------KEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQL 1459
Cdd:PRK03918 571 ELAELLKELEELGFESVEELEERLKELEpfyneylelkdaeKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELE 650
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 1572047519 1460 QVQKQMDEEDRRSEFSFKEEIASLKQKLDASLTEADDLRMQVSRN 1504
Cdd:PRK03918 651 ELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKT 695
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
613-830 |
3.34e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 613 VLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEK 692
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 693 NMSDVEVQKQLLLES-----------------TTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESdES 755
Cdd:COG4942 95 LRAELEAQKEELAELlralyrlgrqpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEA-ER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 756 SAISEITKQMEAAKKELEASEKEKSELreqMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAG 830
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKL---LARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1148-1408 |
3.37e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1148 AAQSSSSVEQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKMrvefIAKEKIISDLRSELSTISTELvvqk 1227
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRI----AALARRIRALEQELAALEAEL---- 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1228 atvektkmdfGELETREKRATADRENEKMEEIRLretfAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKK 1307
Cdd:COG4942 86 ----------AELEKEIAELRAELEAQKEELAEL----LRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQ 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1308 AQNSQDEASESRfkTLEASAEQAKLESEQKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRI 1387
Cdd:COG4942 152 AEELRADLAELA--ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALI 229
|
250 260
....*....|....*....|.
gi 1572047519 1388 EGLEAEVKKLTAANETKAVKA 1408
Cdd:COG4942 230 ARLEAEAAAAAERTPAAGFAA 250
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1239-1503 |
3.46e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 45.31 E-value: 3.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1239 ELETREKRATADRENEKMEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASEs 1318
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE- 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1319 rfktLEASAEQAKLESEQKLRALEELLKSSESEIEELKIKEISAEKDRSHW-EVEKEMLEGEAKELTDRIEGLEAEVKKL 1397
Cdd:COG1196 321 ----LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALlEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1398 TAANETKAV-KADTDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQLQVQKQMDEEDRRSEFSF 1476
Cdd:COG1196 397 ELAAQLEELeEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
250 260
....*....|....*....|....*..
gi 1572047519 1477 KEEIASLKQKLDASLTEADDLRMQVSR 1503
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADY 503
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
850-1150 |
3.53e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.89 E-value: 3.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 850 IQRAQGALDDAEKEVKVLKEQLERAQSALESSQE--LASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLEN 927
Cdd:COG4372 40 LDKLQEELEQLREELEQAREELEQLEEELEQARSelEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEE 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 928 SNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQ 1007
Cdd:COG4372 120 LQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1008 SSSSAEEALR--AEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALR 1085
Cdd:COG4372 200 EELAEAEKLIesLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELE 279
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 1086 AEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQ 1150
Cdd:COG4372 280 IAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQ 344
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
399-956 |
3.63e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 45.28 E-value: 3.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 399 IERLKEETEKMRLEMSTYKVQLEAKESREFDEEREdVEALKLELNAVKSTRDDLESRITE-NSSSFENYRSEAEKTLAAA 477
Cdd:PRK01156 185 IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKE-IERLSIEYNNAMDDYNNLKSALNElSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 478 KAQFEAEKKALAEKCEELTLKFEQ--ADKEKNEMVQQLSRLQQ-----EMLEKCDALQAEVNEAKALREEIQAKYDDVTQ 550
Cdd:PRK01156 264 DLSMELEKNNYYKELEERHMKIINdpVYKNRNYINDYFKYKNDienkkQILSNIDAEINKYHAIIKKLSVLQKDYNDYIK 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 551 KaeriQGELEESKKVLESekqafenekeqereeqLAKAMEKLNSEQNILDEVTKKLEQSEEEVlaaRGAIQELTEKLEES 630
Cdd:PRK01156 344 K----KSRYDDLNNQILE----------------LEGYEMDYNSYLKSIESLKKKIEEYSKNI---ERMSAFISEILKIQ 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 631 EKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMkiqlincekqkdeavellKQKLEEVEKNMSDVEVQK-------QL 703
Cdd:PRK01156 401 EIDPDAIKKELNEINVKLQDISSKVSSLNQRIRAL------------------RENLDELSRNMEMLNGQSvcpvcgtTL 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 704 LLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELR 783
Cdd:PRK01156 463 GEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINELK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 784 EQMDRLQKVHNAGQ----EDIQKLQKTWELEMAKIA-------KSTEDEKLAR----EQLAGELENAKEDLKVVEEEKHT 848
Cdd:PRK01156 543 DKHDKYEEIKNRYKslklEDLDSKRTSWLNALAVISlidietnRSRSNEIKKQlndlESRLQEIEIGFPDDKSYIDKSIR 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 849 GIQRAQGALDDAEKEVKVLKEQLERAQSALESSQElaSSQKADKIQELEKEL-------QNAQKRSSEELETANEMVRSL 921
Cdd:PRK01156 623 EIENEANNLNNKYNEIQENKILIEKLRGKIDNYKK--QIAEIDSIIPDLKEItsrindiEDNLKKSRKALDDAKANRARL 700
|
570 580 590
....*....|....*....|....*....|....*
gi 1572047519 922 TATLENSNSETEILKQKLETLDKELQARQQTEKAL 956
Cdd:PRK01156 701 ESTIEILRTRINELSDRINDINETLESMKKIKKAI 735
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
687-1168 |
3.64e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.33 E-value: 3.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 687 LEEVEKNMSDVEVQKQLLLESTT----------SEMKQHAEAAEIVKKQLEEAQSSIenlkkDAENERNLKTALESDEss 756
Cdd:COG3096 245 LEAIRVTQSDRDLFKHLITEATNyvaadymrhaNERRELSERALELRRELFGARRQL-----AEEQYRLVEMARELEE-- 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 757 aiseitkqMEAAKKELEAsekeksELREQMDRLQKVHNAgqediQKLQktwelemakiakstedEKLAREQLA-GELENA 835
Cdd:COG3096 318 --------LSARESDLEQ------DYQAASDHLNLVQTA-----LRQQ----------------EKIERYQEDlEELTER 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 836 KEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELAssqkadkIQelekeLQNAQKRsseeLETAN 915
Cdd:COG3096 363 LEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRA-------IQ-----YQQAVQA----LEKAR 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 916 EMVRSLTATLENSNSETEILKQKLETLDKE-LQARQQtekalteeinvLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEK 994
Cdd:COG3096 427 ALCGLPDLTPENAEDYLAAFRAKEQQATEEvLELEQK-----------LSVADAARRQFEKAYELVCKIAGEVERSQAWQ 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 995 VELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAK--AEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQ 1072
Cdd:COG3096 496 TARELLRRYRSQQALAQRLQQLRAQLAELEQRLRQQQNAErlLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAE 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1073 AAQSSSSVEQ---ALRAEIEKLEAK------LQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEkeeklemvKV 1143
Cdd:COG3096 576 AVEQRSELRQqleQLRARIKELAARapawlaAQDALERLREQSGEALADSQEVTAAMQQLLEREREATVE--------RD 647
|
490 500
....*....|....*....|....*
gi 1572047519 1144 QLQQAaqssssvEQALRAEIEKLEA 1168
Cdd:COG3096 648 ELAAR-------KQALESQIERLSQ 665
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
716-840 |
5.56e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.38 E-value: 5.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 716 AEAAEIVKKQLEEAQSSIENLKKDAENERNLKTalesDESSAISEITKQMEAA-KKELEASEKEKSEL---REQMDRLQK 791
Cdd:PRK12704 49 KEAEAIKKEALLEAKEEIHKLRNEFEKELRERR----NELQKLEKRLLQKEENlDRKLELLEKREEELekkEKELEQKQQ 124
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1572047519 792 VHNAGQEDIQKLQKTWELEMAKIAKSTEDEklAREQLageLENAKEDLK 840
Cdd:PRK12704 125 ELEKKEEELEELIEEQLQELERISGLTAEE--AKEIL---LEKVEEEAR 168
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
779-1395 |
6.50e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.67 E-value: 6.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 779 KSELREQMDRLQKVHNAgQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEekhtgiqraqgald 858
Cdd:PRK03918 171 IKEIKRRIERLEKFIKR-TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEE-------------- 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 859 daekeVKVLKEQLERAQSALEssqelassQKADKIQELEKELQNAQKRSSEELETANEMVRSLTaTLENSNSETEILKQK 938
Cdd:PRK03918 236 -----LKEEIEELEKELESLE--------GSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEF 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 939 LETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRA 1018
Cdd:PRK03918 302 YEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1019 ---EIEQLEAKLKAVEQAKAEAlnsllaekehlqaqlhqlgVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKL 1095
Cdd:PRK03918 382 tglTPEKLEKELEELEKAKEEI-------------------EEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCG 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1096 QEI-EEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKeeklemVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIe 1174
Cdd:PRK03918 443 RELtEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKEL------RELEKVLKKESELIKLKELAEQLKELEEKLKKY- 515
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1175 kakmqNSSKREQKVRELSNLNEKMRvEFIAKEKIISDLRSELSTISTELVVQKATVEKTKMDFGELETREKRATADRENE 1254
Cdd:PRK03918 516 -----NLEELEKKAEEYEKLKEKLI-KLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEE 589
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1255 KMEEIRLRETFAKELETMGSALEVKETAYNELK-------------ASAEKKIAKLTSQFEEKLKKAqnSQDEASESRFK 1321
Cdd:PRK03918 590 LEERLKELEPFYNEYLELKDAEKELEREEKELKkleeeldkafeelAETEKRLEELRKELEELEKKY--SEEEYEELREE 667
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572047519 1322 TLEASAEQAKLESEqkLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEgEAKELTDRIEGLEAEVK 1395
Cdd:PRK03918 668 YLELSRELAGLRAE--LEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALE-RVEELREKVKKYKALLK 738
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
861-1467 |
6.98e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 44.24 E-value: 6.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 861 EKEVKVLKEQLERAQSALESSQELASSQKADKIQELE--KELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQK 938
Cdd:TIGR04523 39 EKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNkiKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQ 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 939 LETLDKELQARQQTEKALTEEINVLTTSLAEKEQQ----TAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAA-------- 1006
Cdd:TIGR04523 119 KNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKEleklNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDkiknkllk 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1007 --------QSSSSAEEALRAEIEQLEAK---LKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQ 1075
Cdd:TIGR04523 199 lelllsnlKKKIQKNKSLESQISELKKQnnqLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQ 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1076 SSSSVEQaLRAEIEKLEAKLQEIEEEKKNALNASLAEK-EQQTAQIQELQAQLHQLEVEKEEKLEMVKvQLQQAAQSSSS 1154
Cdd:TIGR04523 279 NNKKIKE-LEKQLNQLKSEISDLNNQKEQDWNKELKSElKNQEKKLEEIQNQISQNNKIISQLNEQIS-QLKKELTNSES 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1155 VEQALRAEIEKLEAKLQEIEK---AKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVE 1231
Cdd:TIGR04523 357 ENSEKQRELEEKQNEIEKLKKenqSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETII 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1232 KTKMDFGELEtrekratadrenekmEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNS 1311
Cdd:TIGR04523 437 KNNSEIKDLT---------------NQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1312 QDEASESRFKTLEASAEQAKLESEQklraleELLKSSESEIEeLKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLE 1391
Cdd:TIGR04523 502 NEEKKELEEKVKDLTKKISSLKEKI------EKLESEKKEKE-SKISDLEDELNKDDFELKKENLEKEIDEKNKEIEELK 574
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1392 AEVKKLTAANETKAVKAD------TDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAENGQLQVQKQM 1465
Cdd:TIGR04523 575 QTQKSLKKKQEEKQELIDqkekekKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETI 654
|
..
gi 1572047519 1466 DE 1467
Cdd:TIGR04523 655 KE 656
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
568-757 |
8.02e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 8.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 568 SEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKK 647
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 648 LDSSETSLKE----------------------FSDMIEAMKI---------QLINCEKQKDEAVELLKQKLEEVEKNMSD 696
Cdd:COG4942 99 LEAQKEELAEllralyrlgrqpplalllspedFLDAVRRLQYlkylaparrEQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572047519 697 VEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSA 757
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
885-1217 |
8.12e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.74 E-value: 8.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 885 ASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLT 964
Cdd:COG4372 28 ALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQ 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 965 TSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSLLAE 1044
Cdd:COG4372 108 EEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDE 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1045 KEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQ 1124
Cdd:COG4372 188 LLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1125 AQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKMRVEFIA 1204
Cdd:COG4372 268 LVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLL 347
|
330
....*....|...
gi 1572047519 1205 KEKIISDLRSELS 1217
Cdd:COG4372 348 VGLLDNDVLELLS 360
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
608-905 |
9.30e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.85 E-value: 9.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 608 QSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEamkIQLincekqKDEAVELLKQKL 687
Cdd:COG3206 84 ETQIEILKSRPVLERVVDKLNLDEDPLGEEASREAAIERLRKNLTVEPVKGSNVIE---ISY------TSPDPELAAAVA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 688 EEVEKNMsdVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKkdaenERNLKTALESDESSA---ISEITKQ 764
Cdd:COG3206 155 NALAEAY--LEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFR-----QKNGLVDLSEEAKLLlqqLSELESQ 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 765 MEAAKKELEASEKEKSELREQMDRLQKVHNAGQED--IQKLQK---TWELEMAKIAKSTEDEKLAREQLAGELENAKEDL 839
Cdd:COG3206 228 LAEARAELAEAEARLAALRAQLGSGPDALPELLQSpvIQQLRAqlaELEAELAELSARYTPNHPDVIALRAQIAALRAQL 307
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572047519 840 KvveeekhtgiQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASS--QKADKIQELEKELQNAQK 905
Cdd:COG3206 308 Q----------QEAQRILASLEAELEALQAREASLQAQLAQLEARLAElpELEAELRRLEREVEVARE 365
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
723-1115 |
1.10e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 723 KKQLEEAQSSIENLKKDAENERNLK----TALESDESSAISEITKQMEAA---KKELEASEKEKSELREQM----DRLQK 791
Cdd:PRK04863 260 KHLITESTNYVAADYMRHANERRVHleeaLELRRELYTSRRQLAAEQYRLvemARELAELNEAESDLEQDYqaasDHLNL 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 792 VHNA--GQEDIQKLQKtwelEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEkhtgIQRAQGALDDAEKEVKVLKE 869
Cdd:PRK04863 340 VQTAlrQQEKIERYQA----DLEELEERLEEQNEVVEEADEQQEENEARAEAAEEE----VDELKSQLADYQQALDVQQT 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 870 ---QLERAQSALESSQEL--ASSQKADKIQELEKELQNAQKRSSEEL-----------------ETANEMVRSLTATLEN 927
Cdd:PRK04863 412 raiQYQQAVQALERAKQLcgLPDLTADNAEDWLEEFQAKEQEATEELlsleqklsvaqaahsqfEQAYQLVRKIAGEVSR 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 928 SNS-------------------ETEILKQKLETLDKELQARQQTEKALTEEINVLTTSL-------AEKEQQTAQIQNLQ 981
Cdd:PRK04863 492 SEAwdvarellrrlreqrhlaeQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLddedeleQLQEELEARLESLS 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 982 TQiyqmevekeekvelvkvqlqqaAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNsllaekehLQAQLHQLGVEKEE 1061
Cdd:PRK04863 572 ES----------------------VSEARERRMALRQQLEQLQARIQRLAARAPAWLA--------AQDALARLREQSGE 621
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1572047519 1062 KLEmVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQ 1115
Cdd:PRK04863 622 EFE-DSQDVTEYMQQLLERERELTVERDELAARKQALDEEIERLSQPGGSEDPR 674
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
460-568 |
1.20e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 460 SSSFENYRSEAEKTLAAAKAQFEAEKK-ALAEKCEELTLKFEQADKE----KNEMVQQLSRLQQ--EMLE-KCDALQAEV 531
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEAKKEAEAIKKeALLEAKEEIHKLRNEFEKElrerRNELQKLEKRLLQkeENLDrKLELLEKRE 109
|
90 100 110
....*....|....*....|....*....|....*..
gi 1572047519 532 NEAKALREEIQAKYDDVTQKAERIQGELEESKKVLES 568
Cdd:PRK12704 110 EELEKKEKELEQKQQELEKKEEELEELIEEQLQELER 146
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
682-909 |
1.44e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.08 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 682 LLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDessaISEI 761
Cdd:PHA02562 171 LNKDKIRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDE----LLNL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 762 TKQMEAAKKELEASEKEKSELREQMDRLQKVHN----------------AGQEDIQKLQKtwelEMAKIAKSTEDEKLAR 825
Cdd:PHA02562 247 VMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKmyekggvcptctqqisEGPDRITKIKD----KLKELQHSLEKLDTAI 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 826 EQLAgELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESsqelassqKADKIQELEKELQNAQK 905
Cdd:PHA02562 323 DELE-EIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVD--------NAEELAKLQDELDKIVK 393
|
....
gi 1572047519 906 RSSE 909
Cdd:PHA02562 394 TKSE 397
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1064-1223 |
1.76e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 1.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1064 EMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEE-----KKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEE-- 1136
Cdd:COG3206 160 AYLEQNLELRREEARKALEFLEEQLPELRKELEEAEAAleefrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEae 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1137 ------KLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQE-----------IEKAKMQNSSKREQKVRELSNLNEKMR 1199
Cdd:COG3206 240 arlaalRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAElsarytpnhpdVIALRAQIAALRAQLQQEAQRILASLE 319
|
170 180
....*....|....*....|....
gi 1572047519 1200 VEFIAKEKIISDLRSELSTISTEL 1223
Cdd:COG3206 320 AELEALQAREASLQAQLAQLEARL 343
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
1324-1445 |
1.81e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 43.15 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1324 EASAeQAKLESEQKLRALEELlkssESEIEELKIKEISAEKDRSHWEVEK-EMLEGEAKELTDRIEGLEAEVKK-LTAAN 1401
Cdd:COG0542 397 EAAA-RVRMEIDSKPEELDEL----ERRLEQLEIEKEALKKEQDEASFERlAELRDELAELEEELEALKARWEAeKELIE 471
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1572047519 1402 ETKAVKADTDARKVVR-ELQKEVKQLYNELNDKNQqfdMVQEELT 1445
Cdd:COG0542 472 EIQELKEELEQRYGKIpELEKELAELEEELAELAP---LLREEVT 513
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1158-1498 |
2.07e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.72 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1158 ALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKmRVEFIAKEKIISDLRSElstistelvvqKATVEKTKMDF 1237
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEER-REELETLEAEIEDLRET-----------IAETEREREEL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1238 GElETREKRATA----DRENEKMEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQD 1313
Cdd:PRK02224 278 AE-EVRDLRERLeeleEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1314 EASESRFK--TLEASAEQAKLESEQKLRALEELlkssESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLE 1391
Cdd:PRK02224 357 RAEELREEaaELESELEEAREAVEDRREEIEEL----EEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1392 AEVKklTAANETKAVKADTDARK---------------VVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAEN 1456
Cdd:PRK02224 433 ATLR--TARERVEEAEALLEAGKcpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDR 510
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1572047519 1457 GQLQVQKQMDEEDRRSEfsFKEEIASLKQKLDASLTEADDLR 1498
Cdd:PRK02224 511 IERLEERREDLEELIAE--RRETIEEKRERAEELRERAAELE 550
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1016-1218 |
2.17e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 42.73 E-value: 2.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1016 LRAEIEQLEAklkAVEQAKAEALnsllaekEHLQAQLHQLGvEKEEKLEMVKvQLQQAAQSSSSVEQALRAEIEKLEAKL 1095
Cdd:PRK10929 28 ITQELEQAKA---AKTPAQAEIV-------EALQSALNWLE-ERKGSLERAK-QYQQVIDNFPKLSAELRQQLNNERDEP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1096 QEIEEEKK-NALN-------------ASLAEKEQQTA-QIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQA-- 1158
Cdd:PRK10929 96 RSVPPNMStDALEqeilqvssqllekSRQAQQEQDRArEISDSLSQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQAql 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572047519 1159 --LRAEIEKLEAKLQEIEKAkmQNSSKREQkvrELSnlneKMRVEFIAK-----EKIISDLRSELST 1218
Cdd:PRK10929 176 taLQAESAALKALVDELELA--QLSANNRQ---ELA----RLRSELAKKrsqqlDAYLQALRNQLNS 233
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
275-484 |
2.59e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 275 RIREMEQRIQKTEEE---WTNRINESDQQHAinLATTKAEMHAALENKDSEIEQWRRKCATLEQqdadanqrWSDKVEKV 351
Cdd:COG4913 611 KLAALEAELAELEEElaeAEERLEALEAELD--ALQERREALQRLAEYSWDEIDVASAEREIAE--------LEAELERL 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 352 QAMNKALEseknEMIEKLSEAKAQgvKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLemstykvQLEAKESREFDEE 431
Cdd:COG4913 681 DASSDDLA----ALEEQLEELEAE--LEELEEELDELKGEIGRLEKELEQAEEELDELQD-------RLEAAEDLARLEL 747
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1572047519 432 REDVEALKLEL---NAVKSTRDDLESRITENSSSFENYRSEAEKTLAAAKAQFEAE 484
Cdd:COG4913 748 RALLEERFAAAlgdAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAE 803
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1018-1234 |
2.74e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1018 AEIEQLEAKLKAVEQ---AKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQaLRAEIEKLEAK 1094
Cdd:COG4942 20 DAAAEAEAELEQLQQeiaELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE-LEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1095 LQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQ------SSSSVEQALRAEIEKLEA 1168
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEElradlaELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572047519 1169 KLQEIEKAKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEKTK 1234
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
756-912 |
2.82e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.88 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 756 SAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQkTWELEMAkiaksteDEKLAREQLAGELEna 835
Cdd:PRK09039 53 SALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQ-ALLAELA-------GAGAAAEGRAGELA-- 122
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1572047519 836 kedlKVVEEEKHTGiQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKAdKIQELEKELQNAQKRSSEELE 912
Cdd:PRK09039 123 ----QELDSEKQVS-ARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQA-KIADLGRRLNVALAQRVQELN 193
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1293-1397 |
2.87e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.22 E-value: 2.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1293 KIAKLTSQFEEKLKKAQNSQ------DEASESRFKTLEASAEQAKLESE-QKLRALEELLKSSESEIEELKIKeiSAEKD 1365
Cdd:PRK05771 10 LIVTLKSYKDEVLEALHELGvvhiedLKEELSNERLRKLRSLLTKLSEAlDKLRSYLPKLNPLREEKKKVSVK--SLEEL 87
|
90 100 110
....*....|....*....|....*....|..
gi 1572047519 1366 RSHWEVEKEMLEGEAKELTDRIEGLEAEVKKL 1397
Cdd:PRK05771 88 IKDVEEELEKIEKEIKELEEEISELENEIKEL 119
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
354-572 |
3.02e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.22 E-value: 3.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 354 MNK----ALESEKNEMIEKLSEAKAQGVKAVLEEEE----RKRTEMETDLNDEIERLKEETEKMRL---EMSTYKVQ--- 419
Cdd:PRK05771 6 MKKvlivTLKSYKDEVLEALHELGVVHIEDLKEELSnerlRKLRSLLTKLSEALDKLRSYLPKLNPlreEKKKVSVKsle 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 420 -LEAKESREFDEEREDVEALKLELNAVKSTRDDLESRITE------NSSSFENYRSEaeKTLAA----AKAQFEAEKKAL 488
Cdd:PRK05771 86 eLIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERlepwgnFDLDLSLLLGF--KYVSVfvgtVPEDKLEELKLE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 489 AEKCEELTLKFeqaDKEKNEMV----QQLSRLQQEMLEKCDALQAEVNE---AKALREEIQAKYDDVTQKAERIQGELEE 561
Cdd:PRK05771 164 SDVENVEYIST---DKGYVYVVvvvlKELSDEVEEELKKLGFERLELEEegtPSELIREIKEELEEIEKERESLLEELKE 240
|
250
....*....|.
gi 1572047519 562 SKKVLESEKQA 572
Cdd:PRK05771 241 LAKKYLEELLA 251
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1302-1449 |
3.27e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 3.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1302 EEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEEllkssesEIEELkikeisaekdrshwEVEKEMLEGEAK 1381
Cdd:COG2433 379 EEALEELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEE-------QVERL--------------EAEVEELEAELE 437
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572047519 1382 ELTDRIEGLEAEVKKLtaaneTKAVKADTDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKT 1449
Cdd:COG2433 438 EKDERIERLERELSEA-----RSEERREIRKDREISRLDREIERLERELEEERERIEELKRKLERLKE 500
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
755-982 |
3.38e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 3.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 755 SSAISEITKQMEAAKKELEASEKEKSELREQmdrlQKVHNAGQEDIQKLQKTWELEMakiakstedeklAREQLAGELEN 834
Cdd:COG3206 174 RKALEFLEEQLPELRKELEEAEAALEEFRQK----NGLVDLSEEAKLLLQQLSELES------------QLAEARAELAE 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 835 AKEDLKVVEEEKHTGIQRAQGALDDAekEVKVLKEQLERAQSALessQELASSQKAD--KIQELEKELQNAQKRSSEELE 912
Cdd:COG3206 238 AEARLAALRAQLGSGPDALPELLQSP--VIQQLRAQLAELEAEL---AELSARYTPNhpDVIALRAQIAALRAQLQQEAQ 312
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572047519 913 tanEMVRSLTATLENSNSETEILKQKLETLDKELQ---ARQQTEKALTEEINVLT---TSLAEKEQQTAQIQNLQT 982
Cdd:COG3206 313 ---RILASLEAELEALQAREASLQAQLAQLEARLAelpELEAELRRLEREVEVARelyESLLQRLEEARLAEALTV 385
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
591-1107 |
3.41e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.93 E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 591 KLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMiEAMKIQLI 670
Cdd:TIGR04523 153 ELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISEL-KKQNNQLK 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 671 NCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLL---LESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENErnlk 747
Cdd:TIGR04523 232 DNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIkkqLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQD---- 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 748 taLESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAK------STEDE 821
Cdd:TIGR04523 308 --WNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKlkkenqSYKQE 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 822 KLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKAdkiqeLEKELQ 901
Cdd:TIGR04523 386 IKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKEL-----IIKNLD 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 902 NAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSL----AEKEQQTAQI 977
Cdd:TIGR04523 461 NTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIekleSEKKEKESKI 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 978 QNLQTQIYQMEVEKEEKVELVKVQLQQAA-QSSSSAEEALRAEIEQLEAKLKAVEQAKAEaLNSLLAEKEHLQAQLHQ-- 1054
Cdd:TIGR04523 541 SDLEDELNKDDFELKKENLEKEIDEKNKEiEELKQTQKSLKKKQEEKQELIDQKEKEKKD-LIKEIEEKEKKISSLEKel 619
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 1572047519 1055 -LGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALN 1107
Cdd:TIGR04523 620 eKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKT 673
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
773-1125 |
3.48e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 773 EASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWE---------LEMAKIAKSTEDEKLAREQLaGELENAKEDLkvve 843
Cdd:PRK04863 782 AAREKRIEQLRAEREELAERYATLSFDVQKLQRLHQafsrfigshLAVAFEADPEAELRQLNRRR-VELERALADH---- 856
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 844 eekHTGIQRAQGALDDAekevkvlKEQLERAQSALESSQELASSQKADKIQELEKELQNAQ--KRSSEELETANEMVRSL 921
Cdd:PRK04863 857 ---ESQEQQQRSQLEQA-------KEGLSALNRLLPRLNLLADETLADRVEEIREQLDEAEeaKRFVQQHGNALAQLEPI 926
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 922 TATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTT-SLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKV 1000
Cdd:PRK04863 927 VSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHfSYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRARE 1006
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1001 QLQQAAQSSssaeealrAEIEQLEAKLKAVEQAKAEALNSLLAEkehlqaqLHQLGVEKEEKLEmvkvqlQQAAQSSSSV 1080
Cdd:PRK04863 1007 QLRQAQAQL--------AQYNQVLASLKSSYDAKRQMLQELKQE-------LQDLGVPADSGAE------ERARARRDEL 1065
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1572047519 1081 EQALRA---EIEKLEAKLQEIEEEKKNALN-ASLAEKEQQTAQIQELQA 1125
Cdd:PRK04863 1066 HARLSAnrsRRNQLEKQLTFCEAEMDNLTKkLRKLERDYHEMREQVVNA 1114
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
181-779 |
3.81e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.93 E-value: 3.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 181 NKLVDDVNTTRKLLETTQDECLQKVEKLRLEKRILAEKLSNSAGNGDGKEELEKKCEDYKRMLEQCKIKIKSLQQDKKEQ 260
Cdd:TIGR04523 165 KKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEK 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 261 QQlitvdnddsvdpRIREMEQRIQKTEEEWTNRINEsdqqhainlattkaemhaaLENKDSEIEQWRRKCATLEQQDADA 340
Cdd:TIGR04523 245 TT------------EISNTQTQLNQLKDEQNKIKKQ-------------------LSEKQKELEQNNKKIKELEKQLNQL 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 341 NQRWSD-KVEKVQAMNKALESEKNEMIEKLSEakaqgvkavLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQ 419
Cdd:TIGR04523 294 KSEISDlNNQKEQDWNKELKSELKNQEKKLEE---------IQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRE 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 420 LEAKESRefdeeredVEALKLELNAVKSTRDDLESRITENSSSFENYRSEAEktlaaakaQFEAEKKALAEKCEELTLKF 499
Cdd:TIGR04523 365 LEEKQNE--------IEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQ--------QKDEQIKKLQQEKELLEKEI 428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 500 EQADKEKNEMVQQLSRLQqemlEKCDALQAEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFenekeq 579
Cdd:TIGR04523 429 ERLKETIIKNNSEIKDLT----NQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKEL------ 498
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 580 ereeqlakamEKLNSEQNILDEVTKKLEQSEEEVLAargAIQELTEKLEESEKETSTAKTELEAVSKKLDSS--ETSLKE 657
Cdd:TIGR04523 499 ----------KKLNEEKKELEEKVKDLTKKISSLKE---KIEKLESEKKEKESKISDLEDELNKDDFELKKEnlEKEIDE 565
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 658 FSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVE--VQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSI-- 733
Cdd:TIGR04523 566 KNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEekEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLkq 645
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 1572047519 734 --ENLKKDAENERNLKTALES---DESSAISEITKQMEAAKKELEASEKEK 779
Cdd:TIGR04523 646 evKQIKETIKEIRNKWPEIIKkikESKTKIDDIIELMKDWLKELSLHYKKY 696
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
621-1356 |
3.82e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.88 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 621 QELTEKLEESEKETSTAkTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQ 700
Cdd:TIGR00618 166 KELLMNLFPLDQYTQLA-LMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAY 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 701 KQLLLESTTSEMKQHAEAAEIVKkQLEEAQSSIENLKKDAEN-ERNLKTALESDESSAISEITKQMEAAKKELEASEKEK 779
Cdd:TIGR00618 245 LTQKREAQEEQLKKQQLLKQLRA-RIEELRAQEAVLEETQERiNRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSR 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 780 SELREQMDRLQKVHNAGQEDIQKLQkTWELEMAKIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHtgiqraqgaldd 859
Cdd:TIGR00618 324 AKLLMKRAAHVKQQSSIEEQRRLLQ-TLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTT------------ 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 860 aekevkvLKEQLERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATlensnSETEILKQKl 939
Cdd:TIGR00618 391 -------LTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAIT-----CTAQCEKLE- 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 940 ETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQtqiyqmevEKEEKVELVKVQLQQAAQSSSSAEEALRAE 1019
Cdd:TIGR00618 458 KIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLEL--------QEEPCPLCGSCIHPNPARQDIDNPGPLTRR 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1020 IEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQlhqlgVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIE 1099
Cdd:TIGR00618 530 MQRGEQTYAQLETSEEDVYHQLTSERKQRASL-----KEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLS 604
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1100 EEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEKAKMQ 1179
Cdd:TIGR00618 605 EAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQK 684
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1180 NSSKREQKVRELSNLNEKMRV--EFIAKEKIISDLRSELSTISTELVVQKATVEKTKMDFGELETREKRATADRENEKME 1257
Cdd:TIGR00618 685 MQSEKEQLTYWKEMLAQCQTLlrELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHF 764
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1258 EIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKK------AQNSQDEASESRFKTLEASAEQAK 1331
Cdd:TIGR00618 765 NNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSdedilnLQCETLVQEEEQFLSRLEEKSATL 844
|
730 740
....*....|....*....|....*
gi 1572047519 1332 LESEQKLRALEELLKSSESEIEELK 1356
Cdd:TIGR00618 845 GEITHQLLKYEECSKQLAQLTQEQA 869
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
596-902 |
3.86e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 41.75 E-value: 3.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 596 QNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSlkeFSDMIEAMKIQLINCEKQ 675
Cdd:PRK04778 104 KHEINEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLANRFS---FGPALDELEKQLENLEEE 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 676 KDEAVEL---------------LKQKLEEVEKNMSDV---------EVQKQLL-LESTTSEMKQ---HAEAAEI------ 721
Cdd:PRK04778 181 FSQFVELtesgdyveareildqLEEELAALEQIMEEIpellkelqtELPDQLQeLKAGYRELVEegyHLDHLDIekeiqd 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 722 VKKQLEEAQSSIENLKKDAENERNlktaleSDESSAISEITKQME---AAKKELeasEKEKSELREQMDRLQKVHNAGQE 798
Cdd:PRK04778 261 LKEQIDENLALLEELDLDEAEEKN------EEIQERIDQLYDILErevKARKYV---EKNSDTLPDFLEHAKEQNKELKE 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 799 DIQKLQKTWELemakiaksTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQR---AQGALDDAEKEVKVLKEQLERAQ 875
Cdd:PRK04778 332 EIDRVKQSYTL--------NESELESVRQLEKQLESLEKQYDEITERIAEQEIAyseLQEELEEILKQLEEIEKEQEKLS 403
|
330 340
....*....|....*....|....*..
gi 1572047519 876 SALeSSQELASSQKADKIQELEKELQN 902
Cdd:PRK04778 404 EML-QGLRKDELEAREKLERYRNKLHE 429
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1082-1317 |
3.91e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1082 QALRAEIEKLEAKLQEIEEEkknaLNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAqssssveqALRA 1161
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQE----IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELA--------ALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1162 EIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQKATVEKTKMDFGELE 1241
Cdd:COG4942 84 ELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1572047519 1242 TREKRATADRENekmeeirlRETFAKELETMGSALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASE 1317
Cdd:COG4942 164 ALRAELEAERAE--------LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
586-830 |
4.13e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.35 E-value: 4.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 586 AKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLkefsdmieam 665
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEI---------- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 666 kiqlincekqkDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMkqhAEAAEIVKKQLEEAQSSIENLKKDAENERN 745
Cdd:COG3883 82 -----------EERREELGERARALYRSGGSVSYLDVLLGSESFSDF---LDRLSALSKIADADADLLEELKADKAELEA 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 746 LKTALEsdesSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAR 825
Cdd:COG3883 148 KKAELE----AKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAA 223
|
....*
gi 1572047519 826 EQLAG 830
Cdd:COG3883 224 AAAAA 228
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1156-1352 |
5.27e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 5.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1156 EQALRAEIEKLEAKLQEIEkAKMQNSSKREQKVRELSNLNEKMRVEFIAK----EKIISDLRSELSTISTELVVQKATVE 1231
Cdd:PLN02939 165 KEALQGKINILEMRLSETD-ARIKLAAQEKIHVEILEEQLEKLRNELLIRgateGLCVHSLSKELDVLKEENMLLKDDIQ 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1232 KTKMDFGEL-ETREKRATADRENEKMEEiRLRETFAKELETMGSALEVKETAYNELKASAEK---KIAKLTSQFEEKLKK 1307
Cdd:PLN02939 244 FLKAELIEVaETEERVFKLEKERSLLDA-SLRELESKFIVAQEDVSKLSPLQYDCWWEKVENlqdLLDRATNQVEKAALV 322
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1572047519 1308 AQNSQDeaSESRFKTLEASAEQA---KLESE------QKLRALEELLKSSESEI 1352
Cdd:PLN02939 323 LDQNQD--LRDKVDKLEASLKEAnvsKFSSYkvellqQKLKLLEERLQASDHEI 374
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1283-1506 |
5.59e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.46 E-value: 5.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1283 YNELKASAEKKIAKLTS-QFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEqkLRALEELLKSSESEIEELKIKEIS 1361
Cdd:COG1196 215 YRELKEELKELEAELLLlKLRELEAELEELEAELEELEAELEELEAELAELEAE--LEELRLELEELELELEEAQAEEYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1362 AEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVkkltaanetkavkadtdarkvvRELQKEVKQLYNELNDKNQQFDMVQ 1441
Cdd:COG1196 293 LLAELARLEQDIARLEERRRELEERLEELEEEL----------------------AELEEELEELEEELEELEEELEEAE 350
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1572047519 1442 EELTRLKTSKETAENGQLQVQKQMDEEDRRsEFSFKEEIASLKQKLDASLTEADDLRMQVSRNEK 1506
Cdd:COG1196 351 EELEEAEAELAEAEEALLEAEAELAEAEEE-LEELAEELLEALRAAAELAAQLEELEEAEEALLE 414
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
373-676 |
5.80e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 5.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 373 KAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESrEFDEEREDVEALKLELNAVKSTRDDL 452
Cdd:COG4372 21 KTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARS-ELEQLEEELEELNEQLQAAQAELAQA 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 453 ESRITENSSSFENYRSEAEKtLAAAKAQFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEvn 532
Cdd:COG4372 100 QEELESLQEEAEELQEELEE-LQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQAL-- 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 533 EAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEE 612
Cdd:COG4372 177 SEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVI 256
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1572047519 613 VLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLINCEKQK 676
Cdd:COG4372 257 LKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAA 320
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
620-787 |
5.82e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 5.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 620 IQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMKIQLinceKQKDEAVELLKQKLEEVEKNMSDVEV 699
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEI----KRLELEIEEVEARIKKYEEQLGNVRN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 700 QKQLllESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEK 779
Cdd:COG1579 88 NKEY--EALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAER 165
|
....*...
gi 1572047519 780 SELREQMD 787
Cdd:COG1579 166 EELAAKIP 173
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
947-1437 |
6.24e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 6.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 947 QARQQTEKALtEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAK 1026
Cdd:COG4913 239 RAHEALEDAR-EQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEAR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1027 LKAVEQAKAEALNSLLA----EKEHLQAQLHQLGVEKEE---KLEMVKVQLQQAAQSSSSVEQ---ALRAEIEKLEAKLQ 1096
Cdd:COG4913 318 LDALREELDELEAQIRGnggdRLEQLEREIERLERELEErerRRARLEALLAALGLPLPASAEefaALRAEAAALLEALE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1097 EIEEEKKNALNASLAEKEQQTAQIQELQAQLHQlevekeeklemvkvqLQQAAQSSSSVEQALRAEIEK----------- 1165
Cdd:COG4913 398 EELEALEEALAEAEAALRDLRRELRELEAEIAS---------------LERRKSNIPARLLALRDALAEalgldeaelpf 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1166 ----LEAKLQE------IEKA------KMQNSSKREQKVRE-LSNLNEKMRVEFiakEKIISDLRSELS------TISTE 1222
Cdd:COG4913 463 vgelIEVRPEEerwrgaIERVlggfalTLLVPPEHYAAALRwVNRLHLRGRLVY---ERVRTGLPDPERprldpdSLAGK 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1223 LVVQK-----------------ATVEktkmDFGELETREKRATAD---RENEKMEEIRLRETFAKELETMGSA---LEVK 1279
Cdd:COG4913 540 LDFKPhpfrawleaelgrrfdyVCVD----SPEELRRHPRAITRAgqvKGNGTRHEKDDRRRIRSRYVLGFDNrakLAAL 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1280 ETAYNELK---ASAEKKIAKLTSQFE--EKLKKAQNSQDEASESRFKTLEASAEQAKLESEqklraLEELLKSSeSEIEE 1354
Cdd:COG4913 616 EAELAELEeelAEAEERLEALEAELDalQERREALQRLAEYSWDEIDVASAEREIAELEAE-----LERLDASS-DDLAA 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1355 LKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLTAANET-----------------KAVKADTDARKVVR 1417
Cdd:COG4913 690 LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAaedlarlelralleerfAAALGDAVERELRE 769
|
570 580
....*....|....*....|
gi 1572047519 1418 ELQKEVKQLYNELNDKNQQF 1437
Cdd:COG4913 770 NLEERIDALRARLNRAEEEL 789
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1335-1455 |
6.37e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.07 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1335 EQKLRALEELLKSSESEIEELKiKEISAEKDRshwEVEKEMleGEAKELTDRIEGLEAEVKKLTAANETKAVKadtDARK 1414
Cdd:PRK05771 16 SYKDEVLEALHELGVVHIEDLK-EELSNERLR---KLRSLL--TKLSEALDKLRSYLPKLNPLREEKKKVSVK---SLEE 86
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1572047519 1415 VVRELQKEVKQLYNELNDKNQQFDMVQEELTRLKTSKETAE 1455
Cdd:PRK05771 87 LIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLE 127
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
859-1191 |
6.38e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 41.38 E-value: 6.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 859 DAEKEVKVLKEQLERAQSALESSQELASSQKADKI-QELEKELQNAQKrsSEELETANEMVRSltaTLENSNSETEILKQ 937
Cdd:PLN03229 433 ELEGEVEKLKEQILKAKESSSKPSELALNEMIEKLkKEIDLEYTEAVI--AMGLQERLENLRE---EFSKANSQDQLMHP 507
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 938 KLetLDKELQARQQTEKALTEEINVLttSLAEKEQQTAQIQNLQTQIyqmeveKEEKVELVKVQLQQAAQSSSSAEEALR 1017
Cdd:PLN03229 508 VL--MEKIEKLKDEFNKRLSRAPNYL--SLKYKLDMLNEFSRAKALS------EKKSKAEKLKAEINKKFKEVMDRPEIK 577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1018 AEIEQLEAKLKAVEQAKAEALNSLLAE---KEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEak 1094
Cdd:PLN03229 578 EKMEALKAEVASSGASSGDELDDDLKEkveKMKKEIELELAGVLKSMGLEVIGVTKKNKDTAEQTPPPNLQEKIESLN-- 655
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1095 lQEIEEEKKNALNASlaekeQQTAQIQELQAQLhqlevekeeklemvkvqlqqaAQSSSSVEQALRAEIEKLEAKLQEIE 1174
Cdd:PLN03229 656 -EEINKKIERVIRSS-----DLKSKIELLKLEV---------------------AKASKTPDVTEKEKIEALEQQIKQKI 708
|
330
....*....|....*..
gi 1572047519 1175 KAKMqNSSKREQKVREL 1191
Cdd:PLN03229 709 AEAL-NSSELKEKFEEL 724
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
604-1129 |
7.51e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 7.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 604 KKLEQSEEEVLAAR------GAIQELTEKLEESEKETSTAKTELEAV-----SKKLDSSETSLKEFSDMIEAMKIQLINC 672
Cdd:COG4913 235 DDLERAHEALEDAReqiellEPIRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELARLEAELERL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 673 EKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKD-AENERNLKTALE 751
Cdd:COG4913 315 EARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEfAALRAEAAALLE 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 752 sDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKvhnagqediqklqktwelemakiAKSTEDEKL--AREQLA 829
Cdd:COG4913 395 -ALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER-----------------------RKSNIPARLlaLRDALA 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 830 GELENAKEDLKVV---------EEEKHTGIQRAQG--ALD---DAEKEVKVLKE----------QLERAQSALESSQELA 885
Cdd:COG4913 451 EALGLDEAELPFVgelievrpeEERWRGAIERVLGgfALTllvPPEHYAAALRWvnrlhlrgrlVYERVRTGLPDPERPR 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 886 SSQK--ADKIQ--------ELEKELQN----AQKRSSEELETANemvRSLTATLENSNSETE-------------IL--- 935
Cdd:COG4913 531 LDPDslAGKLDfkphpfraWLEAELGRrfdyVCVDSPEELRRHP---RAITRAGQVKGNGTRhekddrrrirsryVLgfd 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 936 -KQKLETLDKELQarqqtekALTEEINVLTTSLAEKEQQTAQIQNLQTQIyqmevekeekvelvkvQLQQAAQSSSSAEE 1014
Cdd:COG4913 608 nRAKLAALEAELA-------ELEEELAEAEERLEALEAELDALQERREAL----------------QRLAEYSWDEIDVA 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1015 ALRAEIEQLEAKLKAVEQAkaealNSLLAEkehLQAQLHQLGVEKEEkLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAK 1094
Cdd:COG4913 665 SAEREIAELEAELERLDAS-----SDDLAA---LEEQLEELEAELEE-LEEELDELKGEIGRLEKELEQAEEELDELQDR 735
|
570 580 590
....*....|....*....|....*....|....*...
gi 1572047519 1095 LQEIEEEKKNALNASLAEK---EQQTAQIQELQAQLHQ 1129
Cdd:COG4913 736 LEAAEDLARLELRALLEERfaaALGDAVERELRENLEE 773
|
|
| valS |
PRK05729 |
valyl-tRNA synthetase; Reviewed |
718-873 |
7.51e-03 |
|
valyl-tRNA synthetase; Reviewed
Pssm-ID: 235582 [Multi-domain] Cd Length: 874 Bit Score: 40.86 E-value: 7.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 718 AAEIVKKQLEEAQSSIENLKKdAENERNLKTALESDESSAISeITKQMEAA--KKELEASEKEKselreqmDRLQKvhna 795
Cdd:PRK05729 752 ADAEDRARLEANEAYIKRLAR-LESLEILADDEEAPEGAASA-VVGGAELFlpLEGLIDVEAEL-------ARLEK---- 818
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572047519 796 gqeDIQKLQKtwelEMAKIAKstedeKLAREQLageLENAKEDlkVVEEEKhtgiqraqGALDDAEKEVKVLKEQLER 873
Cdd:PRK05729 819 ---ELAKLEK----EIERVEK-----KLSNEGF---VAKAPEE--VVEKER--------EKLAEYEEKLAKLKERLAR 871
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
469-1160 |
7.83e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.09 E-value: 7.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 469 EAEKTLAAAKAQFEAEKKALAEKCEELTLKFE---------QADKEKNEMVQQLSRlQQEMLEKC----DALQAEVNEAK 535
Cdd:COG3096 289 ELRRELFGARRQLAEEQYRLVEMARELEELSAresdleqdyQAASDHLNLVQTALR-QQEKIERYqedlEELTERLEEQE 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 536 ALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQlaKAMEKLNSEQNILDEVTKKLEQSEEEVLA 615
Cdd:COG3096 368 EVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQ--QAVQALEKARALCGLPDLTPENAEDYLAA 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 616 ARGAIQELTEKLEESEKETSTAKTE-------LEAVSKKLDSSETS---------------LKEFSDMIEAMKIQLINCE 673
Cdd:COG3096 446 FRAKEQQATEEVLELEQKLSVADAArrqfekaYELVCKIAGEVERSqawqtarellrryrsQQALAQRLQQLRAQLAELE 525
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 674 K---QKDEAVELLK-------QKLEEVEkNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENE 743
Cdd:COG3096 526 QrlrQQQNAERLLEefcqrigQQLDAAE-ELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAW 604
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 744 RNLKTALE-----SDESSAIS-EITKQMEAAKKELEASEKEKSELREQMDRLQK-----VHNAGQEDIQKLQKTWELEM- 811
Cdd:COG3096 605 LAAQDALErlreqSGEALADSqEVTAAMQQLLEREREATVERDELAARKQALESqierlSQPGGAEDPRLLALAERLGGv 684
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 812 -----------------------AKIAKSTEDEKLAREQLAGeLENAKEDLKVVEEEKHTGIQRAQGA--LDDA------ 860
Cdd:COG3096 685 llseiyddvtledapyfsalygpARHAIVVPDLSAVKEQLAG-LEDCPEDLYLIEGDPDSFDDSVFDAeeLEDAvvvkls 763
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 861 --------------------EKEVKVLKEQLEraqsalESSQELA-SSQKADKIQELE--------KELQNA-QKRSSEE 910
Cdd:COG3096 764 drqwrysrfpevplfgraarEKRLEELRAERD------ELAEQYAkASFDVQKLQRLHqafsqfvgGHLAVAfAPDPEAE 837
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 911 LETANEMVRSLTATLENSNSETEILKQKLEtldkELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVE 990
Cdd:COG3096 838 LAALRQRRSELERELAQHRAQEQQLRQQLD----QLKEQLQLLNKLLPQANLLADETLADRLEELREELDAAQEAQAFIQ 913
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 991 KEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVeQAKAEALNSLLAEKEH-------------------LQAQ 1051
Cdd:COG3096 914 QHGKALAQLEPLVAVLQSDPEQFEQLQADYLQAKEQQRRL-KQQIFALSEVVQRRPHfsyedavgllgensdlnekLRAR 992
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1052 LHQLGVEKE---EKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEE------------------EKKNALNASL 1110
Cdd:COG3096 993 LEQAEEARRearEQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQELEElgvqadaeaeerarirrdELHEELSQNR 1072
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1111 AEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALR 1160
Cdd:COG3096 1073 SRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAKAGWCAVLR 1122
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1019-1320 |
7.95e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 40.68 E-value: 7.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1019 EIEQLEAKLKAVEQAKAEALNSLLAEK-EHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQE 1097
Cdd:PRK05771 32 HIEDLKEELSNERLRKLRSLLTKLSEAlDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1098 IEEEKKnalnaslaEKEQQTAQIQELQAqlhqlevekeeklemVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEKAk 1177
Cdd:PRK05771 112 LENEIK--------ELEQEIERLEPWGN---------------FDLDLSLLLGFKYVSVFVGTVPEDKLEELKLESDVE- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1178 mqnsskreqKVRELSNLNEKMRVEFIAKEKIISDLRSELStistelvvqkatvektKMDFGELETREKRATADRENEKME 1257
Cdd:PRK05771 168 ---------NVEYISTDKGYVYVVVVVLKELSDEVEEELK----------------KLGFERLELEEEGTPSELIREIKE 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 1258 EIRLREtfaKELETMGSALEVKETAYNELKA------SAEKKIAKLTSQF--------------EEKLKKAQNSQDEASE 1317
Cdd:PRK05771 223 ELEEIE---KERESLLEELKELAKKYLEELLalyeylEIELERAEALSKFlktdktfaiegwvpEDRVKKLKELIDKATG 299
|
...
gi 1572047519 1318 SRF 1320
Cdd:PRK05771 300 GSA 302
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
584-892 |
8.56e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 8.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 584 QLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIE 663
Cdd:COG4372 60 ELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 664 AMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKK--DAE 741
Cdd:COG4372 140 ELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRelAEE 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 742 NERNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDE 821
Cdd:COG4372 220 LLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLA 299
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1572047519 822 KLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQKADK 892
Cdd:COG4372 300 LLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLSKGAEAGVADG 370
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
837-969 |
8.61e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 40.00 E-value: 8.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 837 EDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESsqelassqkadKIQELEKELQNAQKRSSEELETANE 916
Cdd:smart00787 143 EGLKEGLDENLEGLKEDYKLLMKELELLNSIKPKLRDRKDALEE-----------ELRQLKQLEDELEDCDPTELDRAKE 211
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1572047519 917 MVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKALTEEINVLTTSLAE 969
Cdd:smart00787 212 KLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQ 264
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
427-533 |
8.81e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 40.84 E-value: 8.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 427 EFDEEREDVEALKLELNAVKSTRDDLESritENSSSFENYRSEAEKTLAAAKAQFEAEkKALAEKCEELTLKFEQADKEK 506
Cdd:COG0542 412 ELDELERRLEQLEIEKEALKKEQDEASF---ERLAELRDELAELEEELEALKARWEAE-KELIEEIQELKEELEQRYGKI 487
|
90 100
....*....|....*....|....*..
gi 1572047519 507 NEMVQQLSRLQQEMLEKCDALQAEVNE 533
Cdd:COG0542 488 PELEKELAELEEELAELAPLLREEVTE 514
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
160-498 |
8.87e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 8.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 160 SRLKQRLATYKAKYRDAVHRhnkLVDDVNTTRKLLETTQDEcLQKVEKLRLEKRILAEKLSNSAGNGDGK-EELEKKCED 238
Cdd:TIGR02169 659 SRAPRGGILFSRSEPAELQR---LRERLEGLKRELSSLQSE-LRRIENRLDELSQELSDASRKIGEIEKEiEQLEQEEEK 734
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 239 YKRMLEQCKIKIKSLQQDKKEQQQLItvdndDSVDPRIREMEQRIQKTEEEW---------------TNRINESDQQHAI 303
Cdd:TIGR02169 735 LKERLEELEEDLSSLEQEIENVKSEL-----KELEARIEELEEDLHKLEEALndlearlshsripeiQAELSKLEEEVSR 809
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 304 NLATTkAEMHAALENKDSEIEQWRRKCATLEQQDADANQRWSDKVEKVQAMNKALESEKNEMIEKlsEAKAQGVKAVLEE 383
Cdd:TIGR02169 810 IEARL-REIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEEL--EAALRDLESRLGD 886
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 384 EERKRTEMETDLN---DEIERLKEETEKMRLEMSTYKVQLEAKESRE---FDEEREDVE--ALKLELNAVKSTRDDLESR 455
Cdd:TIGR02169 887 LKKERDELEAQLReleRKIEELEAQIEKKRKRLSELKAKLEALEEELseiEDPKGEDEEipEEELSLEDVQAELQRVEEE 966
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1572047519 456 ITE----NSSSFENYRSEAE--KTLAAAKAQFEAEKKALAEKCEELTLK 498
Cdd:TIGR02169 967 IRAlepvNMLAIQEYEEVLKrlDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
584-792 |
9.95e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.38 E-value: 9.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 584 QLAKAMEKLNSEQNILDEVTKKleqSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIE 663
Cdd:PHA02562 189 KIDHIQQQIKTYNKNIEEQRKK---NGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAA 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1572047519 664 AMKIQLINCEK----------------QKDEAVEllkqKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLe 727
Cdd:PHA02562 266 KIKSKIEQFQKvikmyekggvcptctqQISEGPD----RITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLL- 340
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1572047519 728 EAQSSIENLKKDAENERNLKTALESDESSAISE---ITKQMEAAKKELEASEKEKSELREQMDRLQKV 792
Cdd:PHA02562 341 ELKNKISTNKQSLITLVDKAKKVKAAIEELQAEfvdNAEELAKLQDELDKIVKTKSELVKEKYHRGIV 408
|
|
| |
