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Conserved domains on  [gi|1475409326|ref|NP_001352717|]
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acyl-coenzyme A thioesterase 6 isoform 1 [Homo sapiens]

Protein Classification

acyl-CoA thioesterase/bile acid-CoA:amino acid N-acyltransferase family protein( domain architecture ID 10521460)

acyl-CoA thioesterase/bile acid-CoA:amino acid N-acyltransferase (BAAT) family protein may catalyze the hydrolysis of acyl-CoA or catalyze the amidation of bile acids with the amino acids taurine and glycine

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BAAT_C pfam08840
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ...
203-412 1.28e-111

BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).


:

Pssm-ID: 430252 [Multi-domain]  Cd Length: 211  Bit Score: 326.16  E-value: 1.28e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 203 VHLEYFEEAVDFMLQHPKVKGPSIALLGFSKGGDLCLSMASFLKGITATVLINACVANTVAPLHYKDMIIPKLVDDLGKV 282
Cdd:pfam08840   1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQITATVSINGSAVVSGDPLVYKDNPLPPLGEGMRRI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 283 KITKSGFLTFMDTWSNPLEEHNHQSLVPLEKAQVPFLFIVGMDDQSWKSEFYAQIASERLQAHGKE-RPQIICYPETGHC 361
Cdd:pfam08840  81 KVNKDGLLDIRDMFNDPLSKPDPKSLIPVERAKGPFLFVVGQDDHNWPSVFYAKKACERLQKHGKEvEVQLVCYPGAGHL 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1475409326 362 IDPPYFPPSRASVHAVLGEAIFYGGEPKAHSKAQVDAWQQIQTFFHKHLNG 412
Cdd:pfam08840 161 IEPPYFPHCGASFHALVGMPVLWGGEPKAHAKAQEDAWKKIQAFFHKHLGG 211
Bile_Hydr_Trans pfam04775
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ...
16-140 1.65e-47

Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.


:

Pssm-ID: 461422  Cd Length: 127  Bit Score: 158.94  E-value: 1.65e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326  16 DEPLRIAVRGLAPEQPVTLRTSLRDEEGALFRAHARYRADARDELDLERAPALGGSFAGLQPMGLLWALEPEKAL-VRLV 94
Cdd:pfam04775   1 DEPVHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFrPRLY 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1475409326  95 KRDV-RTPFAVELEVLDGHDtEPGRLLCLAQNKRDFLRPGVRREPVR 140
Cdd:pfam04775  81 KRDVlPTPFVVTLSVYDGSE-ESGKPLASVTVERWYMAPGVRRIEVR 126
 
Name Accession Description Interval E-value
BAAT_C pfam08840
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ...
203-412 1.28e-111

BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).


Pssm-ID: 430252 [Multi-domain]  Cd Length: 211  Bit Score: 326.16  E-value: 1.28e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 203 VHLEYFEEAVDFMLQHPKVKGPSIALLGFSKGGDLCLSMASFLKGITATVLINACVANTVAPLHYKDMIIPKLVDDLGKV 282
Cdd:pfam08840   1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQITATVSINGSAVVSGDPLVYKDNPLPPLGEGMRRI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 283 KITKSGFLTFMDTWSNPLEEHNHQSLVPLEKAQVPFLFIVGMDDQSWKSEFYAQIASERLQAHGKE-RPQIICYPETGHC 361
Cdd:pfam08840  81 KVNKDGLLDIRDMFNDPLSKPDPKSLIPVERAKGPFLFVVGQDDHNWPSVFYAKKACERLQKHGKEvEVQLVCYPGAGHL 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1475409326 362 IDPPYFPPSRASVHAVLGEAIFYGGEPKAHSKAQVDAWQQIQTFFHKHLNG 412
Cdd:pfam08840 161 IEPPYFPHCGASFHALVGMPVLWGGEPKAHAKAQEDAWKKIQAFFHKHLGG 211
Bile_Hydr_Trans pfam04775
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ...
16-140 1.65e-47

Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.


Pssm-ID: 461422  Cd Length: 127  Bit Score: 158.94  E-value: 1.65e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326  16 DEPLRIAVRGLAPEQPVTLRTSLRDEEGALFRAHARYRADARDELDLERAPALGGSFAGLQPMGLLWALEPEKAL-VRLV 94
Cdd:pfam04775   1 DEPVHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFrPRLY 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1475409326  95 KRDV-RTPFAVELEVLDGHDtEPGRLLCLAQNKRDFLRPGVRREPVR 140
Cdd:pfam04775  81 KRDVlPTPFVVTLSVYDGSE-ESGKPLASVTVERWYMAPGVRRIEVR 126
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
142-406 2.33e-14

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 71.92  E-value: 2.33e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 142 GPVRAALFLPPDEGPFPGII---DLFGSSRGLcEYRASLLAGHGFAVLALAYFRFEDLPED-----------LNDVHLEY 207
Cdd:COG0412    14 VTLPGYLARPAGGGPRPGVVvlhEIFGLNPHI-RDVARRLAAAGYVVLAPDLYGRGGPGDDpdearalmgalDPELLAAD 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 208 FEEAVDFMLQHPKVKGPSIALLGFSKGGDLCLSMASFLKGITATVLINACVANtvaplhykdmiiPKLVDDLGKVKitks 287
Cdd:COG0412    93 LRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAAARGPDLAAAVSFYGGLPA------------DDLLDLAARIK---- 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 288 gfltfmdtwsnpleehnhqslvplekaqVPFLFIVGMDDQSWKSEFYAQIAsERLQAHGKERpQIICYPETGHCidppYF 367
Cdd:COG0412   157 ----------------------------APVLLLYGEKDPLVPPEQVAALE-AALAAAGVDV-ELHVYPGAGHG----FT 202
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1475409326 368 PPSRASVHAvlgeaifyggepkahsKAQVDAWQQIQTFF 406
Cdd:COG0412   203 NPGRPRYDP----------------AAAEDAWQRTLAFL 225
 
Name Accession Description Interval E-value
BAAT_C pfam08840
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ...
203-412 1.28e-111

BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).


Pssm-ID: 430252 [Multi-domain]  Cd Length: 211  Bit Score: 326.16  E-value: 1.28e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 203 VHLEYFEEAVDFMLQHPKVKGPSIALLGFSKGGDLCLSMASFLKGITATVLINACVANTVAPLHYKDMIIPKLVDDLGKV 282
Cdd:pfam08840   1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQITATVSINGSAVVSGDPLVYKDNPLPPLGEGMRRI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 283 KITKSGFLTFMDTWSNPLEEHNHQSLVPLEKAQVPFLFIVGMDDQSWKSEFYAQIASERLQAHGKE-RPQIICYPETGHC 361
Cdd:pfam08840  81 KVNKDGLLDIRDMFNDPLSKPDPKSLIPVERAKGPFLFVVGQDDHNWPSVFYAKKACERLQKHGKEvEVQLVCYPGAGHL 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1475409326 362 IDPPYFPPSRASVHAVLGEAIFYGGEPKAHSKAQVDAWQQIQTFFHKHLNG 412
Cdd:pfam08840 161 IEPPYFPHCGASFHALVGMPVLWGGEPKAHAKAQEDAWKKIQAFFHKHLGG 211
Bile_Hydr_Trans pfam04775
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ...
16-140 1.65e-47

Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.


Pssm-ID: 461422  Cd Length: 127  Bit Score: 158.94  E-value: 1.65e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326  16 DEPLRIAVRGLAPEQPVTLRTSLRDEEGALFRAHARYRADARDELDLERAPALGGSFAGLQPMGLLWALEPEKAL-VRLV 94
Cdd:pfam04775   1 DEPVHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFrPRLY 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1475409326  95 KRDV-RTPFAVELEVLDGHDtEPGRLLCLAQNKRDFLRPGVRREPVR 140
Cdd:pfam04775  81 KRDVlPTPFVVTLSVYDGSE-ESGKPLASVTVERWYMAPGVRRIEVR 126
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
142-406 2.33e-14

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 71.92  E-value: 2.33e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 142 GPVRAALFLPPDEGPFPGII---DLFGSSRGLcEYRASLLAGHGFAVLALAYFRFEDLPED-----------LNDVHLEY 207
Cdd:COG0412    14 VTLPGYLARPAGGGPRPGVVvlhEIFGLNPHI-RDVARRLAAAGYVVLAPDLYGRGGPGDDpdearalmgalDPELLAAD 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 208 FEEAVDFMLQHPKVKGPSIALLGFSKGGDLCLSMASFLKGITATVLINACVANtvaplhykdmiiPKLVDDLGKVKitks 287
Cdd:COG0412    93 LRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAAARGPDLAAAVSFYGGLPA------------DDLLDLAARIK---- 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 288 gfltfmdtwsnpleehnhqslvplekaqVPFLFIVGMDDQSWKSEFYAQIAsERLQAHGKERpQIICYPETGHCidppYF 367
Cdd:COG0412   157 ----------------------------APVLLLYGEKDPLVPPEQVAALE-AALAAAGVDV-ELHVYPGAGHG----FT 202
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1475409326 368 PPSRASVHAvlgeaifyggepkahsKAQVDAWQQIQTFF 406
Cdd:COG0412   203 NPGRPRYDP----------------AAAEDAWQRTLAFL 225
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
143-368 9.59e-14

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 70.43  E-value: 9.59e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 143 PVRAALFLPPDEGPFPGIIDLFG---SSRGLCEYRASLLAGHGFAVLALAYFRFEDLPEDLNDVHLEYFEEAVDFMLQHP 219
Cdd:COG1506     9 TLPGWLYLPADGKKYPVVVYVHGgpgSRDDSFLPLAQALASRGYAVLAPDYRGYGESAGDWGGDEVDDVLAAIDYLAARP 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 220 KVKGPSIALLGFSKGGDLCLSMASFLKGITATVLINACVANTVAPLHYKDMIIPKLVDDLgkvkitksgfltfmdtWSNP 299
Cdd:COG1506    89 YVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGVSDLRSYYGTTREYTERLMGGP----------------WEDP 152
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1475409326 300 LEEHNHQSLVPLEKAQVPFLFIVGMDDQSWKSEfYAQIASERLQAHGKERpQIICYPETGHCIDPPYFP 368
Cdd:COG1506   153 EAYAARSPLAYADKLKTPLLLIHGEADDRVPPE-QAERLYEALKKAGKPV-ELLVYPGEGHGFSGAGAP 219
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
129-410 1.79e-08

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 54.92  E-value: 1.79e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 129 FLRPGVRREPV----RAG-PVRAALFLPPD-EGPFPGIIdLFGSSRGLCEYR---ASLLAGHGFAVLALAY--------- 190
Cdd:COG1073     3 PPSDKVNKEDVtfksRDGiKLAGDLYLPAGaSKKYPAVV-VAHGNGGVKEQRalyAQRLAELGFNVLAFDYrgygesege 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 191 FRFEDLPeDLNDvhleyFEEAVDFMLQHPKVKGPSIALLGFSKGGDLCLSMASFLKGITATVlinacvanTVAPLHYKDM 270
Cdd:COG1073    82 PREEGSP-ERRD-----ARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPRVKAVI--------LDSPFTSLED 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 271 IIPKLVDDLGKVKITKSGFLTFMdTWSNpLEEHNHQSLVPLEKAQVPFLFIVGMDDQ--SWKSefyaqiaSERLQAHGKE 348
Cdd:COG1073   148 LAAQRAKEARGAYLPGVPYLPNV-RLAS-LLNDEFDPLAKIEKISRPLLFIHGEKDEavPFYM-------SEDLYEAAAE 218
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1475409326 349 RPQIICYPETGHcIDPPYFPPSRasvhavlgeaifyggepkahskaqvdAWQQIQTFFHKHL 410
Cdd:COG1073   219 PKELLIVPGAGH-VDLYDRPEEE--------------------------YFDKLAEFFKKNL 253
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
174-362 1.73e-06

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 48.78  E-value: 1.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 174 RASLLAGHGFAVLALAYFRFEDLPEDLndvhleyfEEAVDFMlqhpKVKGPSIALLGFSKGGDLCLSMASFLKGITATVL 253
Cdd:COG1647    46 YAPRLPGHGTSPEDLLKTTWEDWLEDV--------EEAYEIL----KAGYDKVIVIGLSMGGLLALLLAARYPDVAGLVL 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 254 INACVA---NTVAPLHYKDMIIPKLVDDLGKVKITKSGFLTFMDTWSNPLEEhnHQSLV-----PLEKAQVPFLFIVGMD 325
Cdd:COG1647   114 LSPALKiddPSAPLLPLLKYLARSLRGIGSDIEDPEVAEYAYDRTPLRALAE--LQRLIrevrrDLPKITAPTLIIQSRK 191
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1475409326 326 DQ--SWKSefyAQIASERLQAHGKErpqIICYPETGHCI 362
Cdd:COG1647   192 DEvvPPES---ARYIYERLGSPDKE---LVWLEDSGHVI 224
Aes COG0657
Acetyl esterase/lipase [Lipid transport and metabolism];
148-267 2.12e-04

Acetyl esterase/lipase [Lipid transport and metabolism];


Pssm-ID: 440422 [Multi-domain]  Cd Length: 207  Bit Score: 42.17  E-value: 2.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 148 LFLPPDE-GPFPGIIDL------FGSSRGLCEYRASLLAGHGFAVLALAY-----FRFEDLPEDLNDvhleyfeeAVDFM 215
Cdd:COG0657     3 VYRPAGAkGPLPVVVYFhgggwvSGSKDTHDPLARRLAARAGAAVVSVDYrlapeHPFPAALEDAYA--------ALRWL 74
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 216 LQHPKVKG--PS-IALLGFSKGGDLCLSMASFLKG-----ITATVLINACVANTVAPLHY 267
Cdd:COG0657    75 RANAAELGidPDrIAVAGDSAGGHLAAALALRARDrggprPAAQVLIYPVLDLTASPLRA 134
FSH1 pfam03959
Serine hydrolase (FSH1); This is a family of serine hydrolases.
114-360 5.24e-03

Serine hydrolase (FSH1); This is a family of serine hydrolases.


Pssm-ID: 461110  Cd Length: 208  Bit Score: 38.03  E-value: 5.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 114 TEPGRLLCL---AQNKRDF------LRPGVRREPVRA----GPVRAALflPPDegpFPGIIDLFGSSRGLCEYRAsllag 180
Cdd:pfam03959   1 SKKKKVLCLhgfGQSGEIFraktgaLRKLLKKLGVEFvyldAPFELAE--PAD---LPGSESEKDEGEDDEPYRA----- 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 181 hgfavlalaYFRFEDLPEDLNDvhleyFEEAVDFMLQHPKVKGPSIALLGFSKGgdlclsmasflkgitatvlinACVAN 260
Cdd:pfam03959  71 ---------WFFGDDDTNEYLG-----LDESLDYVRDYIKENGPFDGILGFSQG---------------------AALAA 115
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1475409326 261 TVAplHYKDMIIPKLVDDLgKVKITKSGFLtfmdtwsnpLEEHNHQSLVPLEKAQVPFLFIVGMDDqswksEFYAQIASE 340
Cdd:pfam03959 116 ILA--SLLEEGLPLSHPPL-KFAILFSGFR---------PRPPIYQEYYSEDPIQTPSLHVIGELD-----TVVPEERSE 178
                         250       260
                  ....*....|....*....|
gi 1475409326 341 RLQAHGKERPQIIcYPETGH 360
Cdd:pfam03959 179 KLAEACKNSPTVL-EHPGGH 197
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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